View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7674_low_8 (Length: 246)
Name: NF7674_low_8
Description: NF7674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7674_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 18911456 - 18911228
Alignment:
| Q |
1 |
tcagttattatgatgtttgtactttgtaatcaactcatcacttctcttgctttgctaccattatttttcttctcaatttcagtttcccaggtactcaaat |
100 |
Q |
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| T |
18911456 |
tcagttattatgatgtttgtactttgtaatcaactcatcacttttcttgctttgctaccattttttttcttctcaatttcagtttcccaggtactcaaat |
18911357 |
T |
|
| Q |
101 |
agtgttgcatccttgtcttacaaccattcgggacagcttctagctgtagcatcaagttatactttccaagaagcaaaagaaatgtgagtaattcttatac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18911356 |
agtgttgcatccttgtcttacaaccattcgggacagcttctagctgtagcatcaagttatactttccaagaagcaaaagaaatgtgagtaattcttatac |
18911257 |
T |
|
| Q |
201 |
nnnnnnnatttgcatgaagcatgaagttta |
230 |
Q |
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||||||||||||||||||||||| |
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| T |
18911256 |
-ttttttatttgcatgaagcatgaagttta |
18911228 |
T |
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