View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7675_high_1 (Length: 418)
Name: NF7675_high_1
Description: NF7675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7675_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 243; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 25 - 384
Target Start/End: Complemental strand, 5839818 - 5839463
Alignment:
| Q |
25 |
gttagccctccgattctcaggggaaatgagcctttgtaattcagaattcagctgtgagataaggatatcctaatcgatcaaaaattgtcccaccaaagaa |
124 |
Q |
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| T |
5839818 |
gttagccctccgattctcaggggaaatgaacctttgtaattcagagtttgaccgtgaaataaagatattctgatcgaccaataattattctaccaaagaa |
5839719 |
T |
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| Q |
125 |
tggaactcgagattaaaatattacctcataaccataaagctgagggcttcacacgatccctgatctatcctgaaagcatatctcactccgctcgatcgac |
224 |
Q |
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| T |
5839718 |
tggaactcgagattaaaatattacctcctaacaataaagcggagggcttcacacgatccccgatctatcccgaaagcatatctcactctgttcgatcgac |
5839619 |
T |
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| Q |
225 |
cttacccacatatgagtaactatgatcaataatcaataacttacctaacatatacacattttgaagctaacattagccctggcaactgccaactcccaac |
324 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
5839618 |
cttacccacgtatgagtaactatgatcaataatcaataacttacctaacatatacacattttgaagctaacattagcc----caactgccaactcccaac |
5839523 |
T |
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| Q |
325 |
tatactatgcttaccccgttttggaattacccattgttagttactaacggcacaggttct |
384 |
Q |
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| T |
5839522 |
tatactatgcttaccccgttttggaattacctattgttagttactaacggcataggttct |
5839463 |
T |
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