View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7675_high_5 (Length: 277)

Name: NF7675_high_5
Description: NF7675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7675_high_5
NF7675_high_5
[»] chr8 (49 HSPs)
chr8 (139-260)||(42587390-42587511)
chr8 (139-260)||(616782-616903)
chr8 (139-260)||(623175-623296)
chr8 (139-260)||(32998449-32998570)
chr8 (140-260)||(14237280-14237400)
chr8 (140-260)||(18044425-18044545)
chr8 (140-260)||(40494384-40494504)
chr8 (143-257)||(3100640-3100754)
chr8 (140-260)||(132017-132137)
chr8 (140-260)||(41263810-41263930)
chr8 (146-260)||(2766190-2766304)
chr8 (147-260)||(35403523-35403636)
chr8 (140-260)||(36642000-36642121)
chr8 (135-258)||(4270236-4270359)
chr8 (137-260)||(13216863-13216986)
chr8 (140-250)||(5878317-5878426)
chr8 (140-260)||(8394346-8394466)
chr8 (147-260)||(38957177-38957290)
chr8 (140-242)||(24524100-24524202)
chr8 (147-243)||(22489433-22489529)
chr8 (150-260)||(11637792-11637902)
chr8 (138-246)||(36167074-36167182)
chr8 (139-259)||(6414108-6414228)
chr8 (139-260)||(33700215-33700337)
chr8 (137-204)||(13217219-13217286)
chr8 (143-259)||(18090332-18090447)
chr8 (142-260)||(38497085-38497192)
chr8 (171-256)||(5173282-5173367)
chr8 (140-260)||(40204864-40204984)
chr8 (170-260)||(3370398-3370488)
chr8 (203-260)||(18035163-18035220)
chr8 (213-260)||(40716665-40716712)
chr8 (131-168)||(40918978-40919015)
chr8 (137-169)||(40494617-40494649)
chr8 (137-168)||(41307986-41308017)
chr8 (139-169)||(617016-617046)
chr8 (139-169)||(623409-623439)
chr8 (138-168)||(8697923-8697953)
chr8 (140-169)||(14237513-14237542)
chr8 (139-168)||(40058552-40058581)
chr8 (141-169)||(3100492-3100520)
chr8 (140-168)||(3585451-3585479)
chr8 (133-169)||(24524318-24524354)
chr8 (140-168)||(27034997-27035025)
chr8 (140-168)||(36068080-36068108)
chr8 (140-168)||(37345571-37345599)
chr8 (140-168)||(40486478-40486506)
chr8 (140-168)||(43275646-43275674)
chr8 (140-168)||(45278726-45278754)
[»] chr4 (77 HSPs)
chr4 (139-265)||(35381031-35381157)
chr4 (139-260)||(38416792-38416913)
chr4 (140-260)||(26169986-26170106)
chr4 (137-260)||(47386428-47386551)
chr4 (150-260)||(12240320-12240430)
chr4 (138-259)||(38716885-38717005)
chr4 (140-260)||(25296722-25296842)
chr4 (140-260)||(29830343-29830463)
chr4 (140-260)||(35686373-35686493)
chr4 (140-260)||(44232219-44232339)
chr4 (140-260)||(54330832-54330952)
chr4 (140-260)||(55209716-55209836)
chr4 (139-260)||(43967722-43967843)
chr4 (140-256)||(2760873-2760989)
chr4 (140-260)||(17610280-17610400)
chr4 (140-260)||(31010214-31010334)
chr4 (149-260)||(12625260-12625371)
chr4 (137-260)||(55191821-55191944)
chr4 (143-247)||(55800837-55800941)
chr4 (143-260)||(17446775-17446892)
chr4 (139-260)||(50205742-50205863)
chr4 (140-260)||(19433500-19433624)
chr4 (147-260)||(25918210-25918323)
chr4 (140-260)||(26125708-26125828)
chr4 (138-256)||(50620828-50620946)
chr4 (170-260)||(45291862-45291952)
chr4 (144-253)||(3036984-3037093)
chr4 (140-260)||(9029591-9029714)
chr4 (140-259)||(36523111-36523230)
chr4 (167-260)||(19595732-19595825)
chr4 (140-248)||(27407773-27407881)
chr4 (140-260)||(39307696-39307816)
chr4 (137-257)||(54610859-54610980)
chr4 (164-260)||(4467661-4467756)
chr4 (139-259)||(38721336-38721456)
chr4 (138-260)||(7614613-7614735)
chr4 (147-259)||(5428585-5428695)
chr4 (136-251)||(25101716-25101831)
chr4 (136-260)||(37767100-37767224)
chr4 (151-250)||(2571034-2571133)
chr4 (149-260)||(30446307-30446417)
chr4 (146-241)||(34652208-34652303)
chr4 (138-238)||(23360176-23360273)
chr4 (143-256)||(34316524-34316636)
chr4 (196-260)||(14144599-14144663)
chr4 (151-259)||(27755730-27755842)
chr4 (135-258)||(56297846-56297969)
chr4 (150-260)||(20875389-20875499)
chr4 (196-259)||(50181116-50181179)
chr4 (147-250)||(29051691-29051792)
chr4 (147-260)||(34323076-34323191)
chr4 (198-248)||(19903804-19903854)
chr4 (140-224)||(19897639-19897723)
chr4 (197-260)||(50685339-50685403)
chr4 (196-256)||(53304481-53304541)
chr4 (226-261)||(34652157-34652192)
chr4 (139-169)||(26170220-26170250)
chr4 (198-260)||(55091329-55091391)
chr4 (140-169)||(2760730-2760759)
chr4 (140-169)||(4467520-4467549)
chr4 (139-168)||(12071560-12071589)
chr4 (139-168)||(14261043-14261072)
chr4 (140-169)||(19433358-19433387)
chr4 (139-168)||(21310424-21310453)
chr4 (139-168)||(25704650-25704679)
chr4 (183-256)||(29585991-29586063)
chr4 (171-260)||(32871501-32871590)
chr4 (140-169)||(38416650-38416679)
chr4 (139-168)||(40122734-40122763)
chr4 (140-169)||(44232077-44232106)
chr4 (140-169)||(45292065-45292094)
chr4 (213-250)||(51456506-51456543)
chr4 (140-169)||(55209574-55209603)
chr4 (171-256)||(10550455-10550542)
chr4 (140-168)||(34324832-34324860)
chr4 (133-169)||(35380887-35380923)
chr4 (137-169)||(47386283-47386315)
[»] chr1 (55 HSPs)
chr1 (134-260)||(40771914-40772040)
chr1 (140-260)||(16120582-16120702)
chr1 (137-260)||(11641209-11641332)
chr1 (138-260)||(30003531-30003653)
chr1 (139-260)||(6402552-6402673)
chr1 (137-256)||(6766369-6766488)
chr1 (138-260)||(36757628-36757750)
chr1 (139-260)||(30701717-30701838)
chr1 (139-260)||(17305953-17306074)
chr1 (139-260)||(42788684-42788805)
chr1 (140-260)||(36399098-36399218)
chr1 (144-260)||(40977630-40977746)
chr1 (139-260)||(52024025-52024146)
chr1 (136-256)||(27292636-27292756)
chr1 (138-260)||(24321257-24321381)
chr1 (140-260)||(9342787-9342907)
chr1 (137-260)||(26910073-26910196)
chr1 (139-260)||(42735307-42735431)
chr1 (153-260)||(15912478-15912585)
chr1 (139-256)||(4302117-4302234)
chr1 (149-259)||(28030824-28030934)
chr1 (139-259)||(44647856-44647976)
chr1 (156-250)||(48375018-48375112)
chr1 (151-256)||(38153423-38153528)
chr1 (139-247)||(44644510-44644618)
chr1 (146-260)||(15382568-15382682)
chr1 (147-256)||(42367442-42367543)
chr1 (137-259)||(50972777-50972902)
chr1 (150-260)||(3485349-3485459)
chr1 (155-256)||(30385291-30385392)
chr1 (140-260)||(40800529-40800649)
chr1 (197-260)||(22575729-22575792)
chr1 (141-218)||(25170880-25170955)
chr1 (138-256)||(27984554-27984671)
chr1 (133-169)||(11641060-11641096)
chr1 (147-253)||(25695404-25695513)
chr1 (203-260)||(31444986-31445043)
chr1 (136-169)||(36757482-36757515)
chr1 (136-169)||(40771768-40771801)
chr1 (178-260)||(16689862-16689941)
chr1 (138-259)||(19711835-19711952)
chr1 (138-168)||(3943058-3943088)
chr1 (198-260)||(14777090-14777152)
chr1 (226-260)||(25171240-25171274)
chr1 (139-169)||(36399331-36399361)
chr1 (139-168)||(9588669-9588698)
chr1 (139-168)||(41959822-41959851)
chr1 (139-168)||(44227847-44227876)
chr1 (140-169)||(52024259-52024288)
chr1 (140-168)||(284333-284361)
chr1 (215-251)||(323990-324026)
chr1 (140-168)||(3943776-3943804)
chr1 (140-168)||(23045528-23045556)
chr1 (140-168)||(24772154-24772182)
chr1 (140-168)||(41959078-41959106)
[»] chr7 (64 HSPs)
chr7 (139-260)||(28061657-28061778)
chr7 (140-260)||(36623308-36623428)
chr7 (139-263)||(41897987-41898111)
chr7 (140-260)||(47156027-47156147)
chr7 (140-260)||(42890485-42890605)
chr7 (140-260)||(48602436-48602556)
chr7 (146-260)||(40256063-40256177)
chr7 (139-260)||(16778504-16778625)
chr7 (139-260)||(38851989-38852110)
chr7 (140-260)||(20885103-20885223)
chr7 (134-260)||(40090060-40090186)
chr7 (140-260)||(32431500-32431620)
chr7 (140-262)||(7457862-7457983)
chr7 (140-260)||(36585109-36585229)
chr7 (140-260)||(42877386-42877506)
chr7 (139-260)||(25566690-25566810)
chr7 (155-260)||(44732027-44732132)
chr7 (145-260)||(7438908-7439023)
chr7 (138-256)||(6174834-6174952)
chr7 (138-260)||(35117124-35117245)
chr7 (140-260)||(39130068-39130188)
chr7 (140-240)||(46322127-46322227)
chr7 (140-260)||(46103512-46103625)
chr7 (149-260)||(46479838-46479949)
chr7 (150-260)||(11502722-11502832)
chr7 (140-245)||(8683818-8683923)
chr7 (140-257)||(41088587-41088704)
chr7 (140-260)||(41134630-41134745)
chr7 (147-260)||(30342081-30342194)
chr7 (139-260)||(2198601-2198722)
chr7 (138-260)||(3851075-3851194)
chr7 (150-260)||(5788519-5788629)
chr7 (139-260)||(6766692-6766813)
chr7 (143-256)||(26161599-26161712)
chr7 (140-259)||(36341620-36341739)
chr7 (133-260)||(4131645-4131772)
chr7 (137-256)||(7169123-7169242)
chr7 (147-260)||(27045550-27045663)
chr7 (140-260)||(49110612-49110732)
chr7 (140-258)||(35570193-35570316)
chr7 (147-238)||(42662194-42662284)
chr7 (140-220)||(45331915-45331992)
chr7 (140-243)||(3785520-3785623)
chr7 (137-256)||(16870626-16870745)
chr7 (213-260)||(21379817-21379864)
chr7 (152-260)||(49101955-49102063)
chr7 (213-248)||(23707577-23707612)
chr7 (196-259)||(38767202-38767265)
chr7 (194-256)||(34750556-34750618)
chr7 (198-246)||(37467463-37467511)
chr7 (147-206)||(23707714-23707773)
chr7 (140-259)||(36515839-36515958)
chr7 (138-168)||(10981506-10981536)
chr7 (139-169)||(25566547-25566577)
chr7 (139-169)||(28061514-28061544)
chr7 (139-169)||(41898221-41898251)
chr7 (139-169)||(47156260-47156290)
chr7 (137-166)||(2910856-2910885)
chr7 (139-168)||(25060158-25060187)
chr7 (139-168)||(27813810-27813839)
chr7 (140-169)||(36623541-36623570)
chr7 (140-169)||(46103370-46103399)
chr7 (139-238)||(2952421-2952521)
chr7 (141-169)||(48602669-48602697)
[»] chr6 (53 HSPs)
chr6 (139-260)||(4147930-4148051)
chr6 (137-260)||(18668830-18668953)
chr6 (138-260)||(19088100-19088222)
chr6 (139-260)||(32414821-32414942)
chr6 (140-260)||(22054772-22054892)
chr6 (140-260)||(24624083-24624203)
chr6 (139-260)||(17213926-17214047)
chr6 (139-260)||(20226440-20226561)
chr6 (139-260)||(22120424-22120545)
chr6 (139-260)||(32671815-32671936)
chr6 (140-260)||(6563226-6563346)
chr6 (138-260)||(15383072-15383194)
chr6 (139-260)||(17257793-17257914)
chr6 (138-260)||(3989406-3989527)
chr6 (140-260)||(10520468-10520588)
chr6 (140-260)||(25475955-25476070)
chr6 (148-250)||(31569178-31569280)
chr6 (170-260)||(1040854-1040944)
chr6 (139-260)||(20437155-20437277)
chr6 (151-256)||(21540775-21540880)
chr6 (137-260)||(29790203-29790326)
chr6 (151-260)||(28477764-28477873)
chr6 (141-259)||(4440851-4440969)
chr6 (150-260)||(15337498-15337608)
chr6 (139-260)||(24955538-24955653)
chr6 (151-250)||(29693894-29693993)
chr6 (151-260)||(12225986-12226095)
chr6 (149-259)||(17155158-17155268)
chr6 (146-256)||(31869714-31869824)
chr6 (177-260)||(2360027-2360110)
chr6 (177-256)||(10298719-10298798)
chr6 (139-188)||(16193052-16193101)
chr6 (196-260)||(23158051-23158115)
chr6 (171-250)||(19240744-19240823)
chr6 (198-256)||(3623856-3623913)
chr6 (139-174)||(32420748-32420783)
chr6 (149-250)||(14214065-14214166)
chr6 (204-256)||(8101664-8101716)
chr6 (133-173)||(17942436-17942476)
chr6 (136-168)||(19996318-19996350)
chr6 (137-169)||(20437014-20437046)
chr6 (137-169)||(24623938-24623970)
chr6 (213-260)||(5495322-5495369)
chr6 (138-169)||(19087956-19087987)
chr6 (200-250)||(1260490-1260540)
chr6 (138-168)||(1605577-1605607)
chr6 (138-168)||(7761299-7761329)
chr6 (139-169)||(18668687-18668717)
chr6 (138-168)||(29260190-29260220)
chr6 (139-168)||(15064943-15064972)
chr6 (140-169)||(22055005-22055034)
chr6 (140-168)||(8626482-8626510)
chr6 (196-259)||(26567287-26567351)
[»] chr3 (57 HSPs)
chr3 (139-260)||(42490338-42490459)
chr3 (140-260)||(13499477-13499597)
chr3 (139-260)||(27010616-27010737)
chr3 (139-260)||(39866283-39866404)
chr3 (140-260)||(42761625-42761745)
chr3 (139-260)||(27334873-27334994)
chr3 (140-260)||(21797556-21797676)
chr3 (139-258)||(34912286-34912405)
chr3 (139-260)||(20765195-20765316)
chr3 (139-260)||(33415798-33415919)
chr3 (137-260)||(21005290-21005413)
chr3 (140-233)||(19823900-19823993)
chr3 (139-260)||(36227544-36227665)
chr3 (139-260)||(6910333-6910454)
chr3 (139-260)||(43467884-43468005)
chr3 (140-260)||(54507641-54507761)
chr3 (151-260)||(33803532-33803642)
chr3 (138-229)||(45613571-45613662)
chr3 (140-260)||(43181497-43181618)
chr3 (181-260)||(30213845-30213924)
chr3 (140-259)||(44561784-44561903)
chr3 (170-260)||(38137854-38137944)
chr3 (155-256)||(3430420-3430521)
chr3 (139-260)||(15332948-15333069)
chr3 (146-256)||(25527412-25527520)
chr3 (141-256)||(41252909-41253024)
chr3 (171-260)||(52167240-52167329)
chr3 (139-207)||(32220862-32220930)
chr3 (134-260)||(48334663-48334788)
chr3 (145-260)||(22786635-22786748)
chr3 (139-256)||(23940508-23940625)
chr3 (194-259)||(44856400-44856465)
chr3 (145-260)||(22782271-22782384)
chr3 (131-168)||(36881273-36881310)
chr3 (199-260)||(41751552-41751613)
chr3 (137-169)||(27010471-27010503)
chr3 (138-168)||(12094580-12094610)
chr3 (198-260)||(17643789-17643851)
chr3 (179-245)||(27813445-27813511)
chr3 (196-250)||(33128071-33128125)
chr3 (143-217)||(42049784-42049858)
chr3 (140-169)||(6910567-6910596)
chr3 (136-165)||(13364839-13364868)
chr3 (139-168)||(19241917-19241946)
chr3 (139-168)||(19912187-19912216)
chr3 (140-169)||(20765429-20765458)
chr3 (198-250)||(23224308-23224361)
chr3 (139-168)||(29375137-29375166)
chr3 (136-189)||(37766043-37766096)
chr3 (139-168)||(38806354-38806383)
chr3 (140-169)||(42761483-42761512)
chr3 (140-168)||(198855-198883)
chr3 (202-246)||(3017853-3017897)
chr3 (138-258)||(19327474-19327594)
chr3 (137-165)||(27334728-27334756)
chr3 (139-259)||(30057298-30057418)
chr3 (137-165)||(39866138-39866166)
[»] chr2 (48 HSPs)
chr2 (139-260)||(19141208-19141329)
chr2 (139-256)||(39358145-39358262)
chr2 (140-260)||(8042164-8042284)
chr2 (142-260)||(5404998-5405116)
chr2 (139-256)||(2183103-2183220)
chr2 (140-260)||(7608049-7608169)
chr2 (140-260)||(44365157-44365277)
chr2 (154-260)||(11841735-11841841)
chr2 (147-260)||(6223073-6223186)
chr2 (140-250)||(19262680-19262790)
chr2 (140-260)||(7799847-7799967)
chr2 (151-256)||(36072185-36072290)
chr2 (140-240)||(33607377-33607476)
chr2 (137-260)||(36719466-36719583)
chr2 (146-260)||(32774597-32774711)
chr2 (150-260)||(11931701-11931811)
chr2 (175-260)||(44644905-44644990)
chr2 (139-247)||(9006939-9007047)
chr2 (155-259)||(16865069-16865173)
chr2 (185-260)||(13125287-13125362)
chr2 (139-256)||(42133751-42133868)
chr2 (196-260)||(9172288-9172352)
chr2 (139-222)||(13598441-13598523)
chr2 (151-250)||(43444692-43444791)
chr2 (147-260)||(24251967-24252079)
chr2 (172-260)||(22839069-22839157)
chr2 (151-259)||(24093679-24093788)
chr2 (196-260)||(38292008-38292072)
chr2 (178-259)||(13117467-13117548)
chr2 (140-255)||(44563144-44563260)
chr2 (196-259)||(9553864-9553926)
chr2 (203-258)||(38839136-38839191)
chr2 (147-260)||(19165925-19166037)
chr2 (179-260)||(31610795-31610876)
chr2 (139-169)||(5405229-5405259)
chr2 (139-169)||(7608282-7608312)
chr2 (139-169)||(19141065-19141095)
chr2 (197-255)||(31904027-31904085)
chr2 (171-256)||(36177723-36177809)
chr2 (139-168)||(3518907-3518936)
chr2 (140-169)||(11841593-11841622)
chr2 (139-168)||(12969988-12970017)
chr2 (140-169)||(44365390-44365419)
chr2 (140-168)||(1102503-1102531)
chr2 (213-253)||(3837268-3837308)
chr2 (136-168)||(23366785-23366817)
chr2 (137-169)||(33607605-33607637)
chr2 (140-168)||(34224403-34224431)
[»] chr5 (50 HSPs)
chr5 (140-260)||(978077-978197)
chr5 (139-260)||(8086172-8086293)
chr5 (140-260)||(9502769-9502889)
chr5 (139-260)||(33387219-33387340)
chr5 (145-260)||(14634299-14634414)
chr5 (139-260)||(33587611-33587732)
chr5 (136-260)||(18094223-18094347)
chr5 (140-260)||(40156198-40156318)
chr5 (149-260)||(3472419-3472530)
chr5 (139-260)||(30355016-30355136)
chr5 (140-260)||(7224165-7224285)
chr5 (136-250)||(34111958-34112072)
chr5 (152-249)||(11251126-11251223)
chr5 (151-260)||(11785867-11785977)
chr5 (140-260)||(24992280-24992400)
chr5 (139-248)||(38916404-38916513)
chr5 (137-256)||(39776627-39776746)
chr5 (21-94)||(3263601-3263674)
chr5 (140-260)||(12007774-12007894)
chr5 (140-260)||(9050718-9050827)
chr5 (140-260)||(24916388-24916510)
chr5 (151-260)||(27109700-27109808)
chr5 (134-250)||(20692543-20692657)
chr5 (193-260)||(12447560-12447625)
chr5 (199-260)||(11761125-11761186)
chr5 (135-216)||(18598539-18598620)
chr5 (144-257)||(32017217-32017330)
chr5 (150-250)||(27579582-27579681)
chr5 (213-260)||(32400400-32400447)
chr5 (140-206)||(10696790-10696856)
chr5 (141-199)||(12448275-12448333)
chr5 (198-260)||(18998745-18998807)
chr5 (171-260)||(12456782-12456871)
chr5 (176-238)||(36240095-36240157)
chr5 (171-260)||(6996012-6996100)
chr5 (197-242)||(37495667-37495712)
chr5 (213-257)||(3422355-3422399)
chr5 (197-260)||(26387021-26387084)
chr5 (196-259)||(31197833-31197896)
chr5 (139-169)||(9502626-9502656)
chr5 (140-169)||(978310-978339)
chr5 (108-141)||(3263675-3263708)
chr5 (169-259)||(7607741-7607827)
chr5 (140-169)||(14634157-14634186)
chr5 (140-169)||(33387452-33387481)
chr5 (196-256)||(5947697-5947757)
chr5 (140-168)||(12807102-12807130)
chr5 (140-168)||(15305237-15305265)
chr5 (140-168)||(25773649-25773677)
chr5 (140-168)||(30720741-30720769)
[»] scaffold0018 (1 HSPs)
scaffold0018 (143-260)||(67911-68028)
[»] scaffold0003 (1 HSPs)
scaffold0003 (139-260)||(161979-162100)
[»] scaffold0022 (2 HSPs)
scaffold0022 (137-260)||(100789-100912)
scaffold0022 (140-169)||(100647-100676)
[»] scaffold0295 (2 HSPs)
scaffold0295 (139-260)||(13859-13980)
scaffold0295 (139-201)||(9371-9433)
[»] scaffold0056 (1 HSPs)
scaffold0056 (140-260)||(70961-71080)
[»] scaffold0099 (1 HSPs)
scaffold0099 (140-256)||(28798-28916)
[»] scaffold0225 (1 HSPs)
scaffold0225 (147-260)||(8975-9088)
[»] scaffold0029 (1 HSPs)
scaffold0029 (171-260)||(138172-138261)
[»] scaffold0595 (1 HSPs)
scaffold0595 (197-250)||(4005-4058)
[»] scaffold0262 (1 HSPs)
scaffold0262 (147-260)||(22787-22900)
[»] scaffold0608 (1 HSPs)
scaffold0608 (196-259)||(1576-1639)
[»] scaffold0009 (2 HSPs)
scaffold0009 (147-260)||(217017-217131)
scaffold0009 (196-260)||(53562-53626)
[»] scaffold1431 (1 HSPs)
scaffold1431 (134-168)||(148-182)
[»] scaffold0257 (1 HSPs)
scaffold0257 (140-168)||(23467-23495)


Alignment Details
Target: chr8 (Bit Score: 114; Significance: 7e-58; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 42587511 - 42587390
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42587511 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 42587412  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  42587411 attagcatgtaagatgttgttt 42587390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 616782 - 616903
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  616782 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 616881  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  616882 attagcatgtaagatgttgttt 616903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 623175 - 623296
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  623175 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 623274  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  623275 attagcatgtaagatgttgttt 623296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 32998449 - 32998570
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  32998449 atacaccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaat 32998548  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  32998549 attagcatgtaagatgttgttt 32998570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 14237280 - 14237400
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  14237280 tacttcctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 14237379  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  14237380 ttagcatgtaagatgttgttt 14237400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 18044425 - 18044545
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  18044425 tactccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 18044524  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  18044525 ttagcatgtaagatgttgttt 18044545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 40494384 - 40494504
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  40494384 tactctctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 40494483  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  40494484 ttagcatgtaagatgttgttt 40494504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 3100754 - 3100640
Alignment:
Q  143 tccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatatta 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3100754 tccctccgtttcaaaatacatgtccaatttttgcaatgtgcactatttacttgatttactttgaccatactttttaactaatgtataaatacaaatatta 3100655  T
Q  243 gcatgtaaaatgttg 257  Q
    |||||||| ||||||    
T  3100654 gcatgtaagatgttg 3100640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 132017 - 132137
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  132017 tactccctccgtttcaaaatacatgtccactttttgcaacgtgcactattcacttgacttactttgatcatattttttaactaatgtataaatacaaata 132116  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  132117 ttagcatgtaagatgttgttt 132137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 41263810 - 41263930
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  41263810 tactctctccatttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 41263909  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  41263910 ttagcatgtaagatgttgttt 41263930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 146 - 260
Target Start/End: Complemental strand, 2766304 - 2766190
Alignment:
Q  146 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 245  Q
    |||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2766304 ctccgtttcaaaatacatatccaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatataaatattagca 2766205  T
Q  246 tgtaaaatgttgttt 260  Q
    ||||| |||||||||    
T  2766204 tgtaagatgttgttt 2766190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 35403523 - 35403636
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||| |||    
T  35403523 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacatactttgaccatactttttaactaatgtataaatacagatattaacat 35403622  T
Q  247 gtaaaatgttgttt 260  Q
    |||| |||||||||    
T  35403623 gtaagatgttgttt 35403636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 36642121 - 36642000
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgacca-tactttttaactaatgtataaatacaaat 238  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| || |||||||||||||    
T  36642121 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccattactttttaacttatatataaatacaaat 36642022  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  36642021 attagcatgtaagatgttgttt 36642000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 4270359 - 4270236
Alignment:
Q  135 atatatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatac 234  Q
    ||||| ||| ||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  4270359 atatacactacctccgttttaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatac 4270260  T
Q  235 aaatattagcatgtaaaatgttgt 258  Q
    |||||||| ||||||| |||||||    
T  4270259 aaatattaacatgtaatatgttgt 4270236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 137 - 260
Target Start/End: Complemental strand, 13216986 - 13216863
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaa 236  Q
    ||||||||| | | |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  13216986 atatactccttacatttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataa 13216887  T
Q  237 atattagcatgtaaaatgttgttt 260  Q
    ||||||||||| || |||||||||    
T  13216886 atattagcatgaaagatgttgttt 13216863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 140 - 250
Target Start/End: Original strand, 5878317 - 5878426
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  5878317 tactccctccgtttccaaatacatgtcca-tttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 5878415  T
Q  240 ttagcatgtaa 250  Q
    |||||||||||    
T  5878416 ttagcatgtaa 5878426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 8394346 - 8394466
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||| ||||||||    
T  8394346 tactccctccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccaaattttttaactaatgtataagtacaaata 8394445  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    |||| || ||| |||||||||    
T  8394446 ttagtatttaagatgttgttt 8394466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 38957177 - 38957290
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 246  Q
    |||||||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  38957177 tccgtttcaaaatatatgtccaatttttgcaatgtgcactattaacttgatttactttgaccatattttttaactaacgtataaatacaaatattagcat 38957276  T
Q  247 gtaaaatgttgttt 260  Q
    |||| |||||||||    
T  38957277 gtaagatgttgttt 38957290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 24524100 - 24524202
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  24524100 tactccttccgtttcaaaatacatgttcaaattttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatacaaata 24524199  T
Q  240 tta 242  Q
    |||    
T  24524200 tta 24524202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 22489529 - 22489433
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattag 243  Q
    ||||||| ||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22489529 tccgttttaaaatgcatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattag 22489433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 11637792 - 11637902
Alignment:
Q  150 gtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 249  Q
    ||||||||||  ||||||||||||| |||||||||||||||| |||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  11637792 gtttcaaaatgtatgtccaatttttacaatgtgcactattcacttgacttattttgaccgtactttttaactagtgtataaatacaagtattagcatgta 11637891  T
Q  250 aaatgttgttt 260  Q
    | |||||||||    
T  11637892 agatgttgttt 11637902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 36167074 - 36167182
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    |||||||||||||||| |||||||||||   |||||||||||||| |||||||| ||||||||||||||  ||||||||| |||||||||||||||||||    
T  36167074 tatactccctccgttttaaaatacatgtatcatttttgcaatgtgtactattcacttgacttactttgattatactttttcactaatgtataaatacaaa 36167173  T
Q  238 tattagcat 246  Q
    |||||||||    
T  36167174 tattagcat 36167182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 6414228 - 6414108
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||| ||||||| |||||| |||||  |||||||||||||||||||||||  |||||||||||||||||||||||||| |||| ||||||| ||||     
T  6414228 atactccatccgttttaaaataaatgtcacatttttgcaatgtgcactattcacatgacttactttgaccatactttttaaataatatataaatgcaaag 6414129  T
Q  239 attagcatgtaaaatgttgtt 259  Q
    ||| | |||||||||||||||    
T  6414128 attggtatgtaaaatgttgtt 6414108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 33700337 - 33700215
Alignment:
Q  139 atactccctccgtttcaaaatacatgtc-caatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    |||||||||||||||||||||||||||| |||  ||| ||||| ||||||||||  |  ||||||||||||||| |||||||||||| ||||||||||||    
T  33700337 atactccctccgtttcaaaatacatgtcgcaaaatttacaatgcgcactattcacatagcttactttgaccatattttttaactaatatataaatacaaa 33700238  T
Q  238 tattagcatgtaaaatgttgttt 260  Q
    | |||| | |||| |||||||||    
T  33700237 tgttagtaagtaagatgttgttt 33700215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 204
Target Start/End: Complemental strand, 13217286 - 13217219
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttacttt 204  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  13217286 atatactccttccgtttcaaaatacatgtccaatttttgcaatgtacactattcacttgacttacttt 13217219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 259
Target Start/End: Original strand, 18090332 - 18090447
Alignment:
Q  143 tccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatatta 242  Q
    ||||| ||||| ||| |||||||| ||||||| |||||||||||||| || ||||||| ||||| |||| |||||||||||| |||||||| |||| |||    
T  18090332 tcccttcgttttaaattacatgtcgaattttttcaatgtgcactatttatatgactta-tttgatcatattttttaactaatatataaatataaatgtta 18090430  T
Q  243 gcatgtaaaatgttgtt 259  Q
    |||| ||| ||||||||    
T  18090431 gcatataagatgttgtt 18090447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 260
Target Start/End: Original strand, 38497085 - 38497192
Alignment:
Q  142 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatatt 241  Q
    |||||||||||| |||||| |||| |||||||| |||||||||||||||| ||||||           ||||||||||||||||||||||||||||||||    
T  38497085 ctccctccgttttaaaatatatgttcaatttttacaatgtgcactattcacttgact-----------tactttttaactaatgtataaatacaaatatt 38497173  T
Q  242 agcatgtaaaatgttgttt 260  Q
    |||||| || |||||||||    
T  38497174 agcatggaagatgttgttt 38497192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 5173282 - 5173367
Alignment:
Q  171 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 256  Q
    |||||||||||| ||||||||| ||| ||||||||| |||| | |||||||||| ||||||||||||||||| ||||||| |||||    
T  5173282 ttttgcaatgtgtactattcatatgatttactttgatcatattatttaactaatatataaatacaaatattaacatgtaagatgtt 5173367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 40204984 - 40204864
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||  |||| |||||||||||  | ||||  ||||||||||||||||   ||||||||||| |||| ||||| |||||| |||||||||||||     
T  40204984 tactccctctatttctaaatacatgtcgtaattttaaaatgtgcactattcatccaacttactttgaacatattttttgactaatatataaatacaaatg 40204885  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    |||||| ||||  ||||||||    
T  40204884 ttagcaggtaagttgttgttt 40204864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 3370488 - 3370398
Alignment:
Q  170 tttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||||||||||| ||| ||||  |||||||||||||||||| ||||||| |||| ||||||||||||| |||  |||||| || ||||||    
T  3370488 tttttgcaatgtggactgttcacatgacttactttgaccatattttttaattaatatataaatacaaatgttaatatgtaagatattgttt 3370398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 18035163 - 18035220
Alignment:
Q  203 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||||||| |||||||||||| ||||||| ||||| ||||||||||| |||||||||    
T  18035163 ttgaccataatttttaactaatatataaatgcaaatgttagcatgtaagatgttgttt 18035220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 40716712 - 40716665
Alignment:
Q  213 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  40716712 tttttaactaatatataaatacaaattttagcatgtaagatgttgttt 40716665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 40919015 - 40918978
Alignment:
Q  131 actaatatatactccctccgtttcaaaatacatgtcca 168  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  40919015 actaagatatactccctccgtttcaaaatacatgtcca 40918978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 40494649 - 40494617
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||||    
T  40494649 atatactccctccgtttcaaaatacatgtccaa 40494617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 168
Target Start/End: Complemental strand, 41308017 - 41307986
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||||    
T  41308017 atatactccctccgtttcaaaatacatgtcca 41307986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Complemental strand, 617046 - 617016
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||    
T  617046 atactccctccgtttcaaaatacatgtccaa 617016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Complemental strand, 623439 - 623409
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||    
T  623439 atactccctccgtttcaaaatacatgtccaa 623409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 168
Target Start/End: Complemental strand, 8697953 - 8697923
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||||    
T  8697953 tatactccctccgtttcaaaatacatgtcca 8697923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Complemental strand, 14237542 - 14237513
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  14237542 tactccctccgtttcaaaatacatgtccaa 14237513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Complemental strand, 40058581 - 40058552
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  40058581 atactccctccgtttcaaaatacatgtcca 40058552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 169
Target Start/End: Original strand, 3100492 - 3100520
Alignment:
Q  141 actccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||    
T  3100492 actccctccgtttcaaaatacatgtccaa 3100520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Original strand, 3585451 - 3585479
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  3585451 tactccctccgtttcaaaatacatgtcca 3585479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 24524354 - 24524318
Alignment:
Q  133 taatatatactccctccgtttcaaaatacatgtccaa 169  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  24524354 taataaatactccctccgttccaaaatacatgtccaa 24524318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Original strand, 27034997 - 27035025
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  27034997 tactccctccgtttcaaaatacatgtcca 27035025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Original strand, 36068080 - 36068108
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  36068080 tactccctccgtttcaaaatacatgtcca 36068108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Original strand, 37345571 - 37345599
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  37345571 tactccctccgtttcaaaatacatgtcca 37345599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 40486506 - 40486478
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  40486506 tactccctccgtttcaaaatacatgtcca 40486478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 43275674 - 43275646
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  43275674 tactccctccgtttcaaaatacatgtcca 43275646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 45278754 - 45278726
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  45278754 tactccctccgtttcaaaatacatgtcca 45278726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 4e-56; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 35381157 - 35381031
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35381157 atactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaat 35381058  T
Q  239 attagcatgtaaaatgttgtttcatct 265  Q
    |||||||||||| ||||||||| ||||    
T  35381057 attagcatgtaagatgttgtttgatct 35381031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 38416913 - 38416792
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  38416913 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 38416814  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  38416813 attagcatgtaagatgttgttt 38416792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 26169986 - 26170106
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  26169986 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaata 26170085  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  26170086 ttagcatgtaagatgttgttt 26170106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 137 - 260
Target Start/End: Complemental strand, 47386551 - 47386428
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaa 236  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  47386551 atatactccctccgtttcaaaatacatgtccactttttggaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaa 47386452  T
Q  237 atattagcatgtaaaatgttgttt 260  Q
    |||||||||||||| |||||||||    
T  47386451 atattagcatgtaagatgttgttt 47386428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 12240430 - 12240320
Alignment:
Q  150 gtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 249  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12240430 gtttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 12240331  T
Q  250 aaatgttgttt 260  Q
    | |||||||||    
T  12240330 agatgttgttt 12240320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 38716885 - 38717005
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  38716885 tatactccctctgtttcaaaatacatgtccaatttttgcaatgtgcactattaatt-gacttactttgaccatactttttaactaatgtataaatacaaa 38716983  T
Q  238 tattagcatgtaaaatgttgtt 259  Q
    ||||||||||||| ||||||||    
T  38716984 tattagcatgtaagatgttgtt 38717005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 25296842 - 25296722
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25296842 tactctctccgtttcaaaatacatatctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 25296743  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  25296742 ttagcatgtaagatgttgttt 25296722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 29830343 - 29830463
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  29830343 tactccctccgtttcaaaatacatgtccaatttttttaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 29830442  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  29830443 ttagcatgtaagatgttgttt 29830463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 35686373 - 35686493
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  35686373 tactccctcagtttcaaaatacatgtccaatttttgcaatgtgcactattcacttaacttactttgaccatactttttaactaatgtataaatacaaata 35686472  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||| ||||||| |||||||||    
T  35686473 ttatcatgtaagatgttgttt 35686493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 44232339 - 44232219
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  44232339 tactccatccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 44232240  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  44232239 ttagcatgtaagatgttgttt 44232219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 54330952 - 54330832
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  54330952 tactccctccgtttcgaaatacatgtccaatttttgcaatgtgcgctattcacttgacttactttgaccatactttttaactaatatataaatacaaata 54330853  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  54330852 ttagcatgtaagatgttgttt 54330832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 55209836 - 55209716
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  55209836 tactccctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgatttactttgaccatactttttaactaatatataaatacaaata 55209737  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  55209736 ttagcatgtaagatgttgttt 55209716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 43967722 - 43967843
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||    
T  43967722 atactccttccgtttcaaaatacatgttcaatttttgcaatgtgcactattaacttgacttactttgaccatactttttaactaatatataaatacaaat 43967821  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  43967822 attagcatgtaagatgttgttt 43967843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 2760989 - 2760873
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  2760989 tactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaata 2760890  T
Q  240 ttagcatgtaaaatgtt 256  Q
    ||||||||||| |||||    
T  2760889 ttagcatgtaagatgtt 2760873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 17610280 - 17610400
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  17610280 tactccctccgttttaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatattttttagctaatgtataaatacaaata 17610379  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  17610380 ttagcatgtaagatgttgttt 17610400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 31010214 - 31010334
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31010214 tactccctcggtttcaaaatacatatccaatttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaataaaaata 31010313  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| || ||||||    
T  31010314 ttagcatgtaagatattgttt 31010334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 149 - 260
Target Start/End: Original strand, 12625260 - 12625371
Alignment:
Q  149 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 248  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12625260 cgtttcaaaatacatgttcaatttttgcaatatgcactattcatctgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 12625359  T
Q  249 aaaatgttgttt 260  Q
    || |||||||||    
T  12625360 aagatgttgttt 12625371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 137 - 260
Target Start/End: Original strand, 55191821 - 55191944
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaa 236  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||    
T  55191821 atataatccctccgtttcaaaatatatgttcaatttttgcaatgtgcactattcatttgacttactttgactatactttttaattaatgtgtaaatacaa 55191920  T
Q  237 atattagcatgtaaaatgttgttt 260  Q
    ||||||||||| ||||||||||||    
T  55191921 atattagcatgcaaaatgttgttt 55191944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 143 - 247
Target Start/End: Original strand, 55800837 - 55800941
Alignment:
Q  143 tccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatatta 242  Q
    |||||||||||||| |||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55800837 tccctccgtttcaatatacatcttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatta 55800936  T
Q  243 gcatg 247  Q
    |||||    
T  55800937 gcatg 55800941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 143 - 260
Target Start/End: Complemental strand, 17446892 - 17446775
Alignment:
Q  143 tccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatatta 242  Q
    ||||||| ||| |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  17446892 tccctccattttaaaatatatgtccaatttttacaatgtgcactattcatttgactaactttgaccatacattttaactaatgtataaatacaaatatta 17446793  T
Q  243 gcatgtaaaatgttgttt 260  Q
     ||||||| |||||||||    
T  17446792 acatgtaagatgttgttt 17446775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 50205742 - 50205863
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||| | |||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  50205742 atactccattcgtttcaaaatacatgtcaagtttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaat 50205841  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    ||||||  |||| |||||||||    
T  50205842 attagctcgtaagatgttgttt 50205863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 19433624 - 19433500
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgacc----atactttttaactaatgtataaataca 235  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||    |||||||||||||| ||||||||||||    
T  19433624 tactccctctgtttcaaaatacatgttcaatttttgcaatgtgcacttttcacttgacttactttgaccatatatactttttaactattgtataaataca 19433525  T
Q  236 aatattagcatgtaaaatgttgttt 260  Q
    ||||||||||||||| |||||||||    
T  19433524 aatattagcatgtaagatgttgttt 19433500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 25918210 - 25918323
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 246  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| ||||||| ||||||||||| |||||||||||| ||||||||||||    
T  25918210 tccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgaattattttgaccctactttttaaccaatgtataaatataaatattagcat 25918309  T
Q  247 gtaaaatgttgttt 260  Q
    |||| |||||||||    
T  25918310 gtaagatgttgttt 25918323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 26125708 - 26125828
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||||||||||||||||||| |  | |||||||| |||| |||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  26125708 tactccctccgtttcaaaatataaattcaatttttacaatatgcattattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 26125807  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  26125808 ttagcatgtaagatgttgttt 26125828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 138 - 256
Target Start/End: Complemental strand, 50620946 - 50620828
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    |||||| | ||||||| |||||| |||||||||||| ||||| ||||||||||| || ||||||||||||||||| ||||||||||||||||||||| ||    
T  50620946 tatacttcgtccgttttaaaatatatgtccaattttagcaatatgcactattcacttaacttactttgaccatacattttaactaatgtataaatactaa 50620847  T
Q  238 tattagcatgtaaaatgtt 256  Q
    ||||||||||||| |||||    
T  50620846 tattagcatgtaagatgtt 50620828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 170 - 260
Target Start/End: Original strand, 45291862 - 45291952
Alignment:
Q  170 tttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  45291862 tttttccaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 45291952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 144 - 253
Target Start/End: Original strand, 3036984 - 3037093
Alignment:
Q  144 ccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattag 243  Q
    ||||| |||||||||||||||||  | || | ||||||| ||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3036984 ccctctgtttcaaaatacatgtcgtaattatacaatgtgtactattcacatgacttactttgaccatactttttaactaatatataaatacaaatattag 3037083  T
Q  244 catgtaaaat 253  Q
    ||||||||||    
T  3037084 catgtaaaat 3037093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 9029714 - 9029591
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatt---tttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaa 236  Q
    |||||| ||||||| |||||||||||||||||   |||||||| || |||||| | || |||||||||||||||||||||||||||||||||||||||||    
T  9029714 tactccatccgttttaaaatacatgtccaattaattttgcaatctgtactatttacttaacttactttgaccatactttttaactaatgtataaatacaa 9029615  T
Q  237 atattagcatgtaaaatgttgttt 260  Q
    ||||||||| |||| || ||||||    
T  9029614 atattagcacgtaagatattgttt 9029591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 140 - 259
Target Start/End: Complemental strand, 36523230 - 36523111
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||| |||||||||||||| |||||  ||||||||||| ||||||||| |  |||||||||||||| |||||||||||||||| |||||||||||||     
T  36523230 tactccatccgtttcaaaatatatgtcgcatttttgcaatatgcactatttacatgacttactttgactatactttttaactaatatataaatacaaatg 36523131  T
Q  240 ttagcatgtaaaatgttgtt 259  Q
    ||| ||||||| ||||||||    
T  36523130 ttaacatgtaagatgttgtt 36523111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 167 - 260
Target Start/End: Original strand, 19595732 - 19595825
Alignment:
Q  167 caatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||||| |||| ||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| || ||||||    
T  19595732 caatttttacaatatgcactattcacttgacttactttaaccatactctttaactaatgtataaatacaaatattagcatgtaatattttgttt 19595825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 140 - 248
Target Start/End: Complemental strand, 27407881 - 27407773
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||| |||||||||||||| |  ||||||||| |||| ||||||||  | ||||||||||||| ||||||||||||||| ||||||||||||||    
T  27407881 tactccctccatttcaaaatacatgacgcatttttgcagtgtgaactattcacataacttactttgaccctactttttaactaatatataaatacaaata 27407782  T
Q  240 ttagcatgt 248  Q
    |||||||||    
T  27407781 ttagcatgt 27407773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 39307696 - 39307816
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||| ||||||||||||||||||||  ||||||||||| | | |||||||  |||||||||||||   ||||||||||||||| |||||||||||||     
T  39307696 tactccatccgtttcaaaatacatgtcgcatttttgcaatataccctattcacatgacttactttgatgctactttttaactaatatataaatacaaatg 39307795  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    |||| ||||||||||||||||    
T  39307796 ttagtatgtaaaatgttgttt 39307816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 54610859 - 54610980
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcact-attcatttgacttactttgaccatactttttaactaatgtataaataca 235  Q
    |||||||| ||||||||||||||| ||||  |||||||||||||| |||| ||||| |||||||||||| | |||| ||||||| |||||||||||||||    
T  54610859 atatactctctccgtttcaaaatatatgtttaatttttgcaatgtacacttattcacttgacttactttaatcatattttttaattaatgtataaataca 54610958  T
Q  236 aatattagcatgtaaaatgttg 257  Q
     ||||||| |||||| ||||||    
T  54610959 gatattagtatgtaagatgttg 54610980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 164 - 260
Target Start/End: Complemental strand, 4467756 - 4467661
Alignment:
Q  164 gtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||||||||  |||||||| |||| | ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4467756 gtccaatttttt-aatgtgcattatttacttgacttgctttgactatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 4467661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 38721336 - 38721456
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||| ||| ||||||||||||  |||||| ||||||| | ||||||  ||||||| ||||| |||| |||||||| ||| |||||||||||||    
T  38721336 atactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaat 38721435  T
Q  239 attagcatgtaaaatgttgtt 259  Q
     ||||||||||| ||||||||    
T  38721436 gttagcatgtaagatgttgtt 38721456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 260
Target Start/End: Original strand, 7614613 - 7614735
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    |||||||| ||||||||||||||||||||  | |||| |||| |  | || |||  ||||||| |||||||||| |||||||||||| ||||||||||||    
T  7614613 tatactccatccgtttcaaaatacatgtcgtaattttacaatatatattaatcacatgacttattttgaccatattttttaactaatatataaatacaaa 7614712  T
Q  238 tattagcatgtaaaatgttgttt 260  Q
    | ||||||||||| |||||||||    
T  7614713 tgttagcatgtaagatgttgttt 7614735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 5428585 - 5428695
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 246  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||  |||||||| |||||||||||||||||||||   ||||||| ||||  || |||    
T  5428585 tccgtttcaaaatacatgtcgcattttggcaatgtgcactattcacatgacttacgttgaccatactttttaactaa--cataaatataaatgctatcat 5428682  T
Q  247 gtaaaatgttgtt 259  Q
    |||| ||||||||    
T  5428683 gtaagatgttgtt 5428695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 136 - 251
Target Start/End: Original strand, 25101716 - 25101831
Alignment:
Q  136 tatatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaataca 235  Q
    |||||| ||||||  |||||||||||||||   |||||||||||||| | |||| || ||| ||| ||||||||||||||||||||||  ||||||| ||    
T  25101716 tatatattccctctatttcaaaatacatgttgcatttttgcaatgtgtattatttatatgatttattttgaccatactttttaactaacatataaattca 25101815  T
Q  236 aatattagcatgtaaa 251  Q
    ||||||||||| ||||    
T  25101816 aatattagcatataaa 25101831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 260
Target Start/End: Complemental strand, 37767224 - 37767100
Alignment:
Q  136 tatatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaataca 235  Q
    |||||||||||||||||| |||||  |||||  | ||||| ||| ||||||||| |  |||||||||||||| ||||||||||||  || ||||||||||    
T  37767224 tatatactccctccgttttaaaatgaatgtcgcaattttgaaatatgcactatttacgtgacttactttgactatactttttaacgtatatataaataca 37767125  T
Q  236 aatattagcatgtaaaatgttgttt 260  Q
    ||| |||| |||||| || ||||||    
T  37767124 aatgttagaatgtaagatattgttt 37767100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 250
Target Start/End: Complemental strand, 2571133 - 2571034
Alignment:
Q  151 tttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 250  Q
    ||||||||||||||||  ||||||  |||||||| ||||||  ||| ||| |||||| ||| |||||||||||| ||||||||||||| |||||||||||    
T  2571133 tttcaaaatacatgtcacatttttataatgtgcattattcacatgatttattttgactatattttttaactaatatataaatacaaatgttagcatgtaa 2571034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 260
Target Start/End: Original strand, 30446307 - 30446417
Alignment:
Q  149 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 248  Q
    ||||||||||| ||||||  || |||| ||| |||| ||||||  ||||||||||||||| || ||||| |||||| ||||||||||||| ||||| |||    
T  30446307 cgtttcaaaatgcatgtcgcatgtttgtaatctgcattattcacatgacttactttgacccta-tttttgactaatatataaatacaaatgttagcctgt 30446405  T
Q  249 aaaatgttgttt 260  Q
    ||||||||||||    
T  30446406 aaaatgttgttt 30446417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 34652303 - 34652208
Alignment:
Q  146 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatatt 241  Q
    |||||||||||||||||||||  ||||||| |||||| |||||| |   ||||||||| ||||||| |||||||||||  ||||||||||||||||    
T  34652303 ctccgtttcaaaatacatgtcacatttttgtaatgtgtactatttacacgacttacttcgaccatattttttaactaacatataaatacaaatatt 34652208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 238
Target Start/End: Original strand, 23360176 - 23360273
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    |||||||| | | ||||||||||||||||  ||||||||||| |||||||||||  ||||||||||||||| || |||||||||||| ||| ||||||||    
T  23360176 tatactccattcatttcaaaatacatgtcgcatttttgcaatatgcactattca--tgacttactttgacc-tattttttaactaatatatgaatacaaa 23360272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 34316524 - 34316636
Alignment:
Q  143 tccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatatta 242  Q
    |||||||| || |||||| |||||  |||||| || ||||||||||| || ||||||||||||| |||| || ||||||||| ||||||||||||| |||    
T  34316524 tccctccgatttaaaatatatgtcgtatttttacagtgtgcactatttatatgacttactttgatcata-ttgttaactaatatataaatacaaatgtta 34316622  T
Q  243 gcatgtaaaatgtt 256  Q
    |||| ||| |||||    
T  34316623 gcatataagatgtt 34316636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 14144663 - 14144599
Alignment:
Q  196 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||||||||||| | |||||||||||| |||||||||||||||||| |||||| |||||||||    
T  14144663 acttactttgaccacattttttaactaatatataaatacaaatattagtatgtaagatgttgttt 14144599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 259
Target Start/End: Original strand, 27755730 - 27755842
Alignment:
Q  151 tttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaacta----atgtataaatacaaatattagcat 246  Q
    ||||||||||||||||  ||||||| ||||| || | ||||| | ||||| |||||||||||||||||||||    || ||||||||||||| ||||||     
T  27755730 tttcaaaatacatgtcgcatttttgtaatgtacattgttcatataacttattttgaccatactttttaactaacatatatataaatacaaatgttagcac 27755829  T
Q  247 gtaaaatgttgtt 259  Q
    |||| ||||||||    
T  27755830 gtaagatgttgtt 27755842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 56297969 - 56297846
Alignment:
Q  135 atatatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatac 234  Q
    |||||| ||||| |||||   |||||||||||  |||||| |||||| || ||||||  | ||||  |||||||||| || ||||||||| |||||||||    
T  56297969 atatatgctcccaccgttcataaatacatgtcgtatttttacaatgtacattattcacataacttgttttgaccatatttattaactaatatataaatac 56297870  T
Q  235 aaatattagcatgtaaaatgttgt 258  Q
    |||| ||||||| |||||||||||    
T  56297869 aaatgttagcatataaaatgttgt 56297846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 20875499 - 20875389
Alignment:
Q  150 gtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 249  Q
    ||||||||||||||||   | ||||  |||||||||||||||| | | |||||||||||||| |||||||||||| |||||||  |||| || |||| ||    
T  20875499 gtttcaaaatacatgttgtaattttaaaatgtgcactattcatataatttactttgaccatattttttaactaatatataaatgtaaatgtttgcatata 20875400  T
Q  250 aaatgttgttt 260  Q
    | |||||||||    
T  20875399 agatgttgttt 20875389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 50181116 - 50181179
Alignment:
Q  196 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtt 259  Q
    ||||||||| | |||| ||||||| |||||||||||||||||||||||||||||| || |||||    
T  50181116 acttactttaatcatattttttaattaatgtataaatacaaatattagcatgtaagatattgtt 50181179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 250
Target Start/End: Original strand, 29051691 - 29051792
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 246  Q
    ||||||| |||||||||||   | |||| |||| | || ||||||  | |||||||||||||||| |||||||||||| |||||||||||  ||||||||    
T  29051691 tccgttttaaaatacatgttgcaattttacaatatacattattcacataacttactttgaccatattttttaactaatatataaatacaa--attagcat 29051788  T
Q  247 gtaa 250  Q
    ||||    
T  29051789 gtaa 29051792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 34323076 - 34323191
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgacca--tactttttaactaatgtataaatacaaatattagc 244  Q
    |||||||||||||||||| |  ||||||  |||||||| ||||||  ||||||||||| | ||  |  ||||||||||||||||| | ||||||||||      
T  34323076 tccgtttcaaaatacatgacgcatttttataatgtgcattattcacatgacttactttaatcatgttttttttaactaatgtatacacacaaatattaat 34323175  T
Q  245 atgtaaaatgttgttt 260  Q
    |||||| |||||||||    
T  34323176 atgtaagatgttgttt 34323191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 19903854 - 19903804
Alignment:
Q  198 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 248  Q
    ||||||||||||||  ||||||||||| ||||||||||||| |||||||||    
T  19903854 ttactttgaccatatattttaactaatatataaatacaaatgttagcatgt 19903804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 19897639 - 19897723
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaat 224  Q
    |||||||| ||||||||||||| ||||  | |||| |||||| |||||||||  | |||||||||||||| | |||| |||||||    
T  19897639 tactcccttcgtttcaaaatacttgtcgcaattttacaatgtacactattcacataacttactttgaccacatttttgaactaat 19897723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 50685403 - 50685339
Alignment:
Q  197 cttactttgaccatactttttaactaatgtataaat-acaaatattagcatgtaaaatgttgttt 260  Q
    ||||||||||||||| |||||||||||| ||||| | | |||| ||| |||||||||||||||||    
T  50685403 cttactttgaccatattttttaactaatatataattaaaaaatgttatcatgtaaaatgttgttt 50685339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 53304481 - 53304541
Alignment:
Q  196 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 256  Q
    ||||||||||| |||| |||| ||||||| || ||||| ||||||||||||||||| ||||    
T  53304481 acttactttgatcatatttttaaactaatatacaaatataaatattagcatgtaaattgtt 53304541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 226 - 261
Target Start/End: Complemental strand, 34652192 - 34652157
Alignment:
Q  226 tataaatacaaatattagcatgtaaaatgttgtttc 261  Q
    ||||||||||||||||||||||||| ||||||||||    
T  34652192 tataaatacaaatattagcatgtaagatgttgtttc 34652157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Complemental strand, 26170250 - 26170220
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||    
T  26170250 atactccctccgtttcaaaatacatgtccaa 26170220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 55091391 - 55091329
Alignment:
Q  198 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||||| | |||| ||||||| |||| ||||||||||||| |||| |||||| |||||||||    
T  55091391 ttactttcatcatattttttaattaatatataaatacaaatgttagtatgtaagatgttgttt 55091329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Original strand, 2760730 - 2760759
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  2760730 tactccctccgtttcaaaatacatgtccaa 2760759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Original strand, 4467520 - 4467549
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  4467520 tactccctccgtttcaaaatacatgtccaa 4467549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Original strand, 12071560 - 12071589
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  12071560 atactccctccgtttcaaaatacatgtcca 12071589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Original strand, 14261043 - 14261072
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  14261043 atactccctccgtttcaaaatacatgtcca 14261072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Original strand, 19433358 - 19433387
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  19433358 tactccctccgtttcaaaatacatgtccaa 19433387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Original strand, 21310424 - 21310453
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  21310424 atactccctccgtttcaaaatacatgtcca 21310453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Original strand, 25704650 - 25704679
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  25704650 atactccctccgtttcaaaatacatgtcca 25704679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 29586063 - 29585991
Alignment:
Q  183 cactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 256  Q
    |||||||||  | |||||||||||| ||| ||||||| |||| | ||||||||||| ||| |||||||||||||    
T  29586063 cactattcacataacttactttgac-atattttttaattaatatgtaaatacaaatgttaacatgtaaaatgtt 29585991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 32871590 - 32871501
Alignment:
Q  171 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||| ||| ||| ||||||| |||||||  ||||| |||| |||||||||||| | ||||||||||| | || |||||  |||||||||    
T  32871590 ttttgtaatatgctctattcacttgacttgttttgatcatattttttaactaatatgtaaatacaaatgtaagtatgtaggatgttgttt 32871501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Original strand, 38416650 - 38416679
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  38416650 tactccctccgtttcaaaatacatgtccaa 38416679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Complemental strand, 40122763 - 40122734
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  40122763 atactccctccgtttcaaaatacatgtcca 40122734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Original strand, 44232077 - 44232106
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  44232077 tactccctccgtttcaaaatacatgtccaa 44232106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Complemental strand, 45292094 - 45292065
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  45292094 tactccctccgtttcaaaatacatgtccaa 45292065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 51456543 - 51456506
Alignment:
Q  213 tttttaactaatgtataaatacaaatattagcatgtaa 250  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  51456543 tttttaactaatatataaatacaaattttagcatgtaa 51456506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Original strand, 55209574 - 55209603
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  55209574 tactccctccgtttcaaaatacatgtccaa 55209603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 10550455 - 10550542
Alignment:
Q  171 ttttgcaatgtgcactattcatttgacttactttgaccatactttt--taactaatgtataaatacaaatattagcatgtaaaatgtt 256  Q
    |||| |||| |||||||||||  ||  ||||||| |||||| ||||  |||||||| |||||||| |||| ||||||||||| |||||    
T  10550455 ttttacaatatgcactattcacatggtttactttaaccatattttttttaactaatatataaataaaaatgttagcatgtaagatgtt 10550542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 34324860 - 34324832
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  34324860 tactccctccgtttcaaaatacatgtcca 34324832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 35380887 - 35380923
Alignment:
Q  133 taatatatactccctccgtttcaaaatacatgtccaa 169  Q
    ||||| ||||| |||||||||||||||||||||||||    
T  35380887 taataaatacttcctccgtttcaaaatacatgtccaa 35380923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 47386283 - 47386315
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||| |||||||||||||||||||||||    
T  47386283 atatactccatccgtttcaaaatacatgtccaa 47386315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 4e-56; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 134 - 260
Target Start/End: Complemental strand, 40772040 - 40771914
Alignment:
Q  134 aatatatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaata 233  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  40772040 aatatatactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaata 40771941  T
Q  234 caaatattagcatgtaaaatgttgttt 260  Q
    ||||||||||||||||| |||||||||    
T  40771940 caaatattagcatgtaagatgttgttt 40771914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 16120702 - 16120582
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16120702 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 16120603  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  16120602 ttagcatgtaagatgttgttt 16120582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 137 - 260
Target Start/End: Complemental strand, 11641332 - 11641209
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaa 236  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  11641332 atatactccctccatttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaa 11641233  T
Q  237 atattagcatgtaaaatgttgttt 260  Q
    |||||||||||||| |||||||||    
T  11641232 atattagcatgtaagatgttgttt 11641209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 138 - 260
Target Start/End: Original strand, 30003531 - 30003653
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30003531 tatactccatccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaa 30003630  T
Q  238 tattagcatgtaaaatgttgttt 260  Q
    ||||||||||||| |||||||||    
T  30003631 tattagcatgtaagatgttgttt 30003653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 6402673 - 6402552
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||    
T  6402673 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaat 6402574  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  6402573 attagcatgtaagatgttgttt 6402552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 137 - 256
Target Start/End: Original strand, 6766369 - 6766488
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaa 236  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  6766369 atatactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaa 6766468  T
Q  237 atattagcatgtaaaatgtt 256  Q
    |||||||||||||| |||||    
T  6766469 atattagcatgtaagatgtt 6766488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 138 - 260
Target Start/End: Complemental strand, 36757750 - 36757628
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  36757750 tatactccatccatttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaa 36757651  T
Q  238 tattagcatgtaaaatgttgttt 260  Q
    ||||||||||||| |||||||||    
T  36757650 tattagcatgtaagatgttgttt 36757628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 30701717 - 30701838
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  30701717 atactccctccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaat 30701816  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||| ||||| |||||||||    
T  30701817 attagcgtgtaagatgttgttt 30701838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 17305953 - 17306074
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||| |||||||||||||    
T  17305953 atactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaattaatatataaatacaaat 17306052  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  17306053 attagcatgtaagatgttgttt 17306074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 42788805 - 42788684
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||| |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42788805 atactccctccatttcaaaatatatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 42788706  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    ||| |||||||| |||||||||    
T  42788705 atttgcatgtaagatgttgttt 42788684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 36399098 - 36399218
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||    
T  36399098 tactccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaata 36399197  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||| ||||| |||||||||    
T  36399198 ttagcgtgtaagatgttgttt 36399218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 40977746 - 40977630
Alignment:
Q  144 ccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattag 243  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40977746 ccctccgttgcaaaatacatgtccaatttttgcaatgtgtactattcacttgactaactttgaccatactttttaactaatgtataaatacaaatattag 40977647  T
Q  244 catgtaaaatgttgttt 260  Q
    ||||||| |||||||||    
T  40977646 catgtaagatgttgttt 40977630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 52024025 - 52024146
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||| ||||    
T  52024025 atactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatataaat 52024124  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||| ||||| |||||||||    
T  52024125 attagcgtgtaagatgttgttt 52024146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 136 - 256
Target Start/End: Original strand, 27292636 - 27292756
Alignment:
Q  136 tatatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaataca 235  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||| |||| |||||||||| ||||||||||||||| |||||||||||    
T  27292636 tatatgctccctccgtttcaaaatatatgtccaatttttgcaatctgcactattcacttgatttactttgactatactttttaactaaagtataaataca 27292735  T
Q  236 aatattagcatgtaaaatgtt 256  Q
    ||||||||||||||| |||||    
T  27292736 aatattagcatgtaagatgtt 27292756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 138 - 260
Target Start/End: Original strand, 24321257 - 24321381
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgacc--atactttttaactaatgtataaataca 235  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||| |||||||||||  ||| |||||||||||||||||||||||    
T  24321257 tatactccctccgttttaaaatacatgtcgaatttttgcaatgtgcactattcacttgatttactttgaccatataatttttaactaatgtataaataca 24321356  T
Q  236 aatattagcatgtaaaatgttgttt 260  Q
    ||||||||||||||| || ||||||    
T  24321357 aatattagcatgtaagatattgttt 24321381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 9342907 - 9342787
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||  |||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  9342907 tactccatccgtttcaaaaaacatgtctaatttttgcaatgtgcgttattcacttgacttactttgatcatattttttaactaatgtataaatacaaata 9342808  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  9342807 ttagcatgtaagatgttgttt 9342787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 137 - 260
Target Start/End: Original strand, 26910073 - 26910196
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaa 236  Q
    ||||| ||||||| ||| |||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26910073 atatattccctccattttaaaatacatgtataatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaa 26910172  T
Q  237 atattagcatgtaaaatgttgttt 260  Q
    |||||| |||| || ||| |||||    
T  26910173 atattaacatgcaagatgatgttt 26910196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 42735431 - 42735307
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatact---ttttaactaatgtataaataca 235  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||   ||||||||||| ||||||||||    
T  42735431 atactccatccgtttcaaaatacatgttcaattattgcaatgtgcactattcacttgacttactttgaccatacttttttttaactaatatataaataca 42735332  T
Q  236 aatattagcatgtaaaatgttgttt 260  Q
    ||||||||||||||| ||| |||||    
T  42735331 aatattagcatgtaagatgatgttt 42735307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 153 - 260
Target Start/End: Complemental strand, 15912585 - 15912478
Alignment:
Q  153 tcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaa 252  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| | | || | ||||||||||||||||||||||| |    
T  15912585 tcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatacttttttatttatttttaaatacaaatattagcatgtaaga 15912486  T
Q  253 tgttgttt 260  Q
    ||||||||    
T  15912485 tgttgttt 15912478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 256
Target Start/End: Original strand, 4302117 - 4302234
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||||| |||||||| | ||||||||| ||||||||||||||| ||||||| | ||||||||||||||  ||  ||||||||||||||||||||| ||||    
T  4302117 atactcgctccgttttataatacatgttcaatttttgcaatgtacactatttacttgacttactttgataatgttttttaactaatgtataaatataaat 4302216  T
Q  239 attagcatgtaaaatgtt 256  Q
    |||||||||||| |||||    
T  4302217 attagcatgtaagatgtt 4302234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 149 - 259
Target Start/End: Complemental strand, 28030934 - 28030824
Alignment:
Q  149 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 248  Q
    |||||||||||||||||   |||||||||||||||| |||| |  ||||||| ||||||||||||||||||||||  ||||||||||||| |||||||||    
T  28030934 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttattttgaccatactttttaactaacatataaatacaaatgttagcatgt 28030835  T
Q  249 aaaatgttgtt 259  Q
    || || |||||    
T  28030834 aagatattgtt 28030824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 44647976 - 44647856
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||| ||| ||||||||||||  |||||| ||||||| | ||||||  ||||||| ||||| |||| |||||||| ||| |||||||||||||    
T  44647976 atactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaat 44647877  T
Q  239 attagcatgtaaaatgttgtt 259  Q
     ||||||||||| ||||||||    
T  44647876 gttagcatgtaagatgttgtt 44647856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 250
Target Start/End: Original strand, 48375018 - 48375112
Alignment:
Q  156 aaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 250  Q
    ||||| |||| ||||||||||||||| || |||||| || ||||| ||||| |||| |||||||||||| |||||||||||||||||||||||||    
T  48375018 aaatatatgttcaatttttgcaatgtacattattcacttaacttattttgatcatattttttaactaatttataaatacaaatattagcatgtaa 48375112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 38153528 - 38153423
Alignment:
Q  151 tttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 250  Q
    ||||||||||||||||  ||||||  |||||||||||||||  ||||||||| | ||||||||||||||||||  ||||||||||||| ||| |||||||    
T  38153528 tttcaaaatacatgtcgcatttttataatgtgcactattcacatgacttactgttaccatactttttaactaacatataaatacaaatgttatcatgtaa 38153429  T
Q  251 aatgtt 256  Q
     |||||    
T  38153428 gatgtt 38153423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 44644618 - 44644510
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||| ||| ||||||||||||  |||||| ||||||| | ||||||  ||||||||||||| |||| |||||||| ||| |||||||||||||    
T  44644618 atactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttactttgatcatattttttaacaaatatataaatacaaat 44644519  T
Q  239 attagcatg 247  Q
     ||||||||    
T  44644518 gttagcatg 44644510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 260
Target Start/End: Complemental strand, 15382682 - 15382568
Alignment:
Q  146 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 245  Q
    |||||||||||||||||||||  | |||| |||||| |||||||||  | ||||||| ||||||   ||||||| |||| |||||||||||||||||| |    
T  15382682 ctccgtttcaaaatacatgtcgcaattttacaatgtacactattcacataacttactctgaccaatttttttaaataatatataaatacaaatattagta 15382583  T
Q  246 tgtaaaatgttgttt 260  Q
    ||||| |||||||||    
T  15382582 tgtaagatgttgttt 15382568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 42367543 - 42367442
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 246  Q
    |||||||||||||||||||| |||| ||||        ||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| || |||    
T  42367543 tccgtttcaaaatacatgtcaaattcttgc--------ctattcacttgacttactttgatcataatttttaactaatgtataaatacaaatactaacat 42367452  T
Q  247 gtaaaatgtt 256  Q
    |||| |||||    
T  42367451 gtaagatgtt 42367442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 259
Target Start/End: Complemental strand, 50972902 - 50972777
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattca----tttgacttactttgaccatactttttaactaatgtataaat 232  Q
    |||||||||| |||||||||| ||||||||  ||||||||||| ||||||| |||      ||||||||||||| |||||||||||| |||| |||||||    
T  50972902 atatactccc-ccgtttcaaattacatgtcacatttttgcaatttgcactaatcacatgactgacttactttgaacatactttttaaataatatataaat 50972804  T
Q  233 acaaatattagcatgtaaaatgttgtt 259  Q
    |||||| ||| ||| |||||| |||||    
T  50972803 acaaatgttaacatataaaatattgtt 50972777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 3485459 - 3485349
Alignment:
Q  150 gtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 249  Q
    |||| ||||||||||||  | |||| |||| ||||||||||   | ||||||||||| |||| |||||||||||| ||||||||||||| ||| ||||||    
T  3485459 gttttaaaatacatgtcgtaattttacaatatgcactattcgcataacttactttgatcatattttttaactaatatataaatacaaatgttatcatgta 3485360  T
Q  250 aaatgttgttt 260  Q
    |  ||||||||    
T  3485359 aggtgttgttt 3485349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 30385392 - 30385291
Alignment:
Q  155 aaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatg 254  Q
    ||||||||||||  | ||||  |||||||||||||||  |   |||||||||||||| |||||||||||| ||||||||||||| |||| |||||| |||    
T  30385392 aaaatacatgtcgcaattttataatgtgcactattcacatagtttactttgaccatattttttaactaatatataaatacaaatgttagtatgtaagatg 30385293  T
Q  255 tt 256  Q
    ||    
T  30385292 tt 30385291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 40800649 - 40800529
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccata-ctttttaactaatgtataaatacaaat 238  Q
    ||||| |||| |||||||||| |||||  | |||| ||||||||| || |||  | ||||||||||||||||  |||||||||||| ||| |||||||||    
T  40800649 tactctctccatttcaaaatatatgtcgtaattttacaatgtgcattaatcacataacttactttgaccatatttttttaactaatatat-aatacaaat 40800551  T
Q  239 attagcatgtaaaatgttgttt 260  Q
     ||||||||||| |||||||||    
T  40800550 gttagcatgtaagatgttgttt 40800529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 22575792 - 22575729
Alignment:
Q  197 cttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||||| | |||| |||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  22575792 cttactttcatcatattttttaactaatatataaatacaaatgttagcatgtaagatgttgttt 22575729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 25170880 - 25170955
Alignment:
Q  141 actccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatacttttta 218  Q
    ||||||| ||||| |||||||||||| ||||| || |||| |||||||||  ||||||||||||||||||| ||||||    
T  25170880 actcccttcgttttaaaatacatgtctaatttctgtaatgcgcactattc--ttgacttactttgaccatatttttta 25170955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 256
Target Start/End: Original strand, 27984554 - 27984671
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    |||||||| ||||||| ||||||||||||  | |||| |||  |||||||||||  |  ||||||||||||||| |||||||||||| ||  ||||||||    
T  27984554 tatactccatccgttttaaaatacatgtcacaattttacaacatgcactattcacattgcttactttgaccata-tttttaactaatatacgaatacaaa 27984652  T
Q  238 tattagcatgtaaaatgtt 256  Q
    | ||||| ||||| |||||    
T  27984653 tgttagcttgtaagatgtt 27984671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 11641060 - 11641096
Alignment:
Q  133 taatatatactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||||||||    
T  11641060 taatatatactccctccgtttcaaaatacatgtccaa 11641096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 253
Target Start/End: Original strand, 25695404 - 25695513
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccata---ctttttaactaatgtataaatacaaatattag 243  Q
    |||||||||||||| || ||  |||||||||||||||| || |||| | |||| | |||||||||    |||||||||||| |||||||| |||| ||||    
T  25695404 tccgtttcaaaataaatttcacatttttgcaatgtgcattaatcatatcacttgcgttgaccatatttttttttaactaatatataaatataaatgttag 25695503  T
Q  244 catgtaaaat 253  Q
    ||||| ||||    
T  25695504 catgttaaat 25695513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 31444986 - 31445043
Alignment:
Q  203 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||||||| |||||||||||| |||||| |||||| || |||||||| |||||||||    
T  31444986 ttgaccatattttttaactaatatataaacacaaatgtttgcatgtaagatgttgttt 31445043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 36757482 - 36757515
Alignment:
Q  136 tatatactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||||||    
T  36757482 tatatactccctccgtttcaaaatacatgtccaa 36757515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 40771768 - 40771801
Alignment:
Q  136 tatatactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||||||    
T  40771768 tatatactccctccgtttcaaaatacatgtccaa 40771801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 16689862 - 16689941
Alignment:
Q  178 atgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||||||||||||  | ||||||||||| |||| ||| |||||||| ||||||||||   ||| |||||||| |||||||||    
T  16689862 atgtgcactattcacataacttactttgatcatattttctaactaatatataaataca---attcgcatgtaatatgttgttt 16689941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 19711952 - 19711835
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    ||||||||||| |||||||||||||| ||  |||||||||| |||||||||| |  ||    ||||| || ||| |||||||||||  |||||||||||     
T  19711952 tatactccctctgtttcaaaatacatatcgcatttttgcaacgtgcactatttacgtg----actttaactatattttttaactaacatataaatacaag 19711857  T
Q  238 tattagcatgtaaaatgttgtt 259  Q
    |  |||||||||| ||| ||||    
T  19711856 tgatagcatgtaagatgctgtt 19711835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 168
Target Start/End: Original strand, 3943058 - 3943088
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||||    
T  3943058 tatactccctccgtttcaaaatacatgtcca 3943088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 14777090 - 14777152
Alignment:
Q  198 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||||||| |||| |||||||||  | |||||||||||||||||  |||||| |||||||||    
T  14777090 ttactttgatcatattttttaactgttatataaatacaaatattaatatgtaagatgttgttt 14777152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 260
Target Start/End: Original strand, 25171240 - 25171274
Alignment:
Q  226 tataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||||||||||||||||||||||| |||||||||    
T  25171240 tataaatacaaatattagcatgtaagatgttgttt 25171274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Complemental strand, 36399361 - 36399331
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||    
T  36399361 atactccctccgtttcaaaatacatgtccaa 36399331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Original strand, 9588669 - 9588698
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  9588669 atactccctccgtttcaaaatacatgtcca 9588698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Complemental strand, 41959851 - 41959822
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  41959851 atactccctccgtttcaaaatacatgtcca 41959822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Original strand, 44227847 - 44227876
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  44227847 atactccctccgtttcaaaatacatgtcca 44227876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Complemental strand, 52024288 - 52024259
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  52024288 tactccctccgtttcaaaatacatgtccaa 52024259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Original strand, 284333 - 284361
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  284333 tactccctccgtttcaaaatacatgtcca 284361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 323990 - 324026
Alignment:
Q  215 tttaactaatgtataaatacaaatattagcatgtaaa 251  Q
    ||||||| || ||||||||||||||||||||||||||    
T  323990 tttaacttatatataaatacaaatattagcatgtaaa 324026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 3943804 - 3943776
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  3943804 tactccctccgtttcaaaatacatgtcca 3943776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 23045556 - 23045528
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  23045556 tactccctccgtttcaaaatacatgtcca 23045528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 24772182 - 24772154
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  24772182 tactccctccgtttcaaaatacatgtcca 24772154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Original strand, 41959078 - 41959106
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  41959078 tactccctccgtttcaaaatacatgtcca 41959106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 28061778 - 28061657
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  28061778 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 28061679  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  28061678 attagcatgtaagatgttgttt 28061657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 36623308 - 36623428
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  36623308 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 36623407  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  36623408 ttagcatgtaagatgttgttt 36623428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 139 - 263
Target Start/End: Original strand, 41897987 - 41898111
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||    
T  41897987 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaat 41898086  T
Q  239 attagcatgtaaaatgttgtttcat 263  Q
    |||||||||||| ||||||||||||    
T  41898087 attagcatgtaagatgttgtttcat 41898111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 47156027 - 47156147
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  47156027 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 47156126  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  47156127 ttagcatgtaagatgttgttt 47156147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 42890605 - 42890485
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  42890605 tactccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttattttgaccatactttttaactaatatataaatacaaata 42890506  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  42890505 ttagcatgtaagatgttgttt 42890485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 48602436 - 48602556
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48602436 tactccctccgtttcaaaatacatgcccaatttttccaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaata 48602535  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  48602536 ttagcatgtaagatgttgttt 48602556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 146 - 260
Target Start/End: Original strand, 40256063 - 40256177
Alignment:
Q  146 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 245  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40256063 ctccgtttcaaaatacatgtccaatttttgcaatgtgctctattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 40256162  T
Q  246 tgtaaaatgttgttt 260  Q
    ||||| |||||||||    
T  40256163 tgtaagatgttgttt 40256177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 16778504 - 16778625
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  16778504 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttggcttactttgaccataatttttaactaatgtataaatacaaat 16778603  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  16778604 attagcatgtaagatgttgttt 16778625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 38852110 - 38851989
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  38852110 atactccctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 38852011  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| || ||||||    
T  38852010 attagcatgtaagatattgttt 38851989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 20885103 - 20885223
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  20885103 tactccctccgtttcaaaatacatgtccaatttttacaatgtggactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 20885202  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  20885203 ttagcatgtaagatgttgttt 20885223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 134 - 260
Target Start/End: Complemental strand, 40090186 - 40090060
Alignment:
Q  134 aatatatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaata 233  Q
    ||||| |||||||||||||| |||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  40090186 aatatgtactccctccgttttaaaatatatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaata 40090087  T
Q  234 caaatattagcatgtaaaatgttgttt 260  Q
    ||||||||||||||||| |||||||||    
T  40090086 caaatattagcatgtaagatgttgttt 40090060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 32431620 - 32431500
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32431620 tactccctccgtttcaaaatatatgtcaaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 32431521  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    |||| |||||| |||||||||    
T  32431520 ttagtatgtaagatgttgttt 32431500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 140 - 262
Target Start/End: Complemental strand, 7457983 - 7457862
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||| |||||||||||||||||||| || ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  7457983 tactccatccgtttcaaaatacatgtctaagttttgcaatgtgcactattcactt-acttactttgaccatactttttaactaatgtataaatacaaata 7457885  T
Q  240 ttagcatgtaaaatgttgtttca 262  Q
    ||||||||||| |||||||||||    
T  7457884 ttagcatgtaagatgttgtttca 7457862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 36585109 - 36585229
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  36585109 tacttcctccgtttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttatttttaccatacttttaaactaatgtataaatacaaata 36585208  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  36585209 ttagcatgtaagatgttgttt 36585229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 42877386 - 42877506
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||    
T  42877386 tactccctccgtttcaaaatacatgtccaaattttgtaatgtgcactattaatttaacttactttgaccatactttttaactaatgtataaataaaaata 42877485  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    |||| |||||| |||||||||    
T  42877486 ttagaatgtaagatgttgttt 42877506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 25566810 - 25566690
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||    
T  25566810 atactctctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttctaactaatgtat-aatacaaat 25566712  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||| | |||||||||    
T  25566711 attagcatgtgagatgttgttt 25566690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 44732027 - 44732132
Alignment:
Q  155 aaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatg 254  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  44732027 aaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatgtataaatacaaatattagcatgtaagatg 44732126  T
Q  255 ttgttt 260  Q
    ||||||    
T  44732127 ttgttt 44732132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 145 - 260
Target Start/End: Original strand, 7438908 - 7439023
Alignment:
Q  145 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagc 244  Q
    |||| ||||||||||||||||| |||||||||||| |||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7438908 cctctgtttcaaaatacatgtctaatttttgcaatatgcattattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagc 7439007  T
Q  245 atgtaaaatgttgttt 260  Q
    |||||| |||||||||    
T  7439008 atgtaagatgttgttt 7439023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 138 - 256
Target Start/End: Original strand, 6174834 - 6174952
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    |||| ||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  6174834 tatattccatccgtttcaaaatatatgtccaatttttgcaaggtgcactattcatttgacttactgtgaccatattttttaactaatgtataaatacaaa 6174933  T
Q  238 tattagcatgtaaaatgtt 256  Q
     |||||||||||| |||||    
T  6174934 cattagcatgtaagatgtt 6174952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 138 - 260
Target Start/End: Original strand, 35117124 - 35117245
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    |||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||    
T  35117124 tatactccctccgttttaaaatacctgttcaatttttgcaatatgcactattcacttgacttactttgaccatac-ttttaactaatgtataaatataaa 35117222  T
Q  238 tattagcatgtaaaatgttgttt 260  Q
    ||||||||||||| |||||||||    
T  35117223 tattagcatgtaagatgttgttt 35117245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 39130188 - 39130068
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||| ||||||| ||||||||| |  |||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||    
T  39130188 tactccatccgttttaaaatacatctttaatttttgcaatgtgcactattcacttgactttctttgaccatattttttaactaatgtataaatacaaata 39130089  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  39130088 ttagcatgtaagatgttgttt 39130068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 46322227 - 46322127
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  46322227 tactccctccatttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtatcaatacaaata 46322128  T
Q  240 t 240  Q
    |    
T  46322127 t 46322127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 46103625 - 46103512
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||    
T  46103625 tactccctccgtttcaaaatacatgtccaatttttacaatgtgcact-------tgacttactttgaccatactttttaactaatatataaatacaaata 46103533  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  46103532 ttagcatgtaagatgttgttt 46103512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 149 - 260
Target Start/End: Original strand, 46479838 - 46479949
Alignment:
Q  149 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 248  Q
    |||||||||||||||||  ||||||| |||||||||||||||  ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  46479838 cgtttcaaaatacatgtttaatttttacaatgtgcactattcgcttgacttactttgaccaaaatttttaactaatgtataaatacaaatattagcatgt 46479937  T
Q  249 aaaatgttgttt 260  Q
    || |||||||||    
T  46479938 aagatgttgttt 46479949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 11502832 - 11502722
Alignment:
Q  150 gtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 249  Q
    |||||||||||||||||||||||||| |||||||| |||| | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11502832 gtttcaaaatacatgtccaatttttgtaatgtgcattattgacttaacttactttgatcatactttttaactaatgtataaatacaaatattagcatgta 11502733  T
Q  250 aaatgttgttt 260  Q
    | |||| ||||    
T  11502732 agatgtcgttt 11502722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 140 - 245
Target Start/End: Original strand, 8683818 - 8683923
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||| | ||||| ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  8683818 tactccattcgttttaaaatacatgtccaatttttgaaatgtgcattattcacttgacttactttgaccatactttttaactaatatataaatacaaata 8683917  T
Q  240 ttagca 245  Q
    ||||||    
T  8683918 ttagca 8683923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 140 - 257
Target Start/End: Original strand, 41088587 - 41088704
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||| ||||||||||||||||||| |||| |||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||| ||||||    
T  41088587 tactccctccatttcaaaatacatgtccaaattttacaatatgcactgttcatctgacttactttgaccatattttttaactaatgtataaatgcaaata 41088686  T
Q  240 ttagcatgtaaaatgttg 257  Q
    ||| ||||||| ||||||    
T  41088687 ttaacatgtaagatgttg 41088704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 41134745 - 41134630
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||| ||||||| ||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||     |||||||||||||||||||||||    
T  41134745 tactccatccgttttaaaatacatgttcaatttttacaatgtgtactattcatttgacttactttgaccata-----taactaatgtataaatacaaata 41134651  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  41134650 ttagcatgtaagatgttgttt 41134630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 30342081 - 30342194
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 246  Q
    ||||||| ||||||||||  |||||||||||||||||| |||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  30342081 tccgttttaaaatacatgatcaatttttgcaatgtgcattattcacttgatttactttgactatactttttaactaatgtataaatacaaatattagtat 30342180  T
Q  247 gtaaaatgttgttt 260  Q
    |||| |||| ||||    
T  30342181 gtaagatgtcgttt 30342194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 2198601 - 2198722
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||| |||||| ||||  ||| ||||||||||| ||||||||| ||| ||| ||||| |||||||||||||||||||||||||||||||    
T  2198601 atactccctccgttttaaaatagatgtgtaatatttgcaatgtgtactattcatctgatttattttgaacatactttttaactaatgtataaatacaaat 2198700  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||| || |||| |||||||||    
T  2198701 attaacaagtaagatgttgttt 2198722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 138 - 260
Target Start/End: Original strand, 3851075 - 3851194
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    |||||| | ||||| |||||||| |||||||||||||||||||||||   |||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  3851075 tatacttcatccgtctcaaaatatatgtccaatttttgcaatgtgca---ttcacttgacttactttgacaatactttttaactaatgtataaatacaaa 3851171  T
Q  238 tattagcatgtaaaatgttgttt 260  Q
    ||||| || |||| || ||||||    
T  3851172 tattaacacgtaagatattgttt 3851194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 5788629 - 5788519
Alignment:
Q  150 gtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 249  Q
    |||| |||||||||||| ||||||||  ||| |||||||||| |||||||||||| | |||||||||| ||||||||||||||||||||||||| |||||    
T  5788629 gtttaaaaatacatgtctaatttttgtgatgagcactattcaattgacttactttaatcatacttttttactaatgtataaatacaaatattagtatgta 5788530  T
Q  250 aaatgttgttt 260  Q
    | |||||||||    
T  5788529 agatgttgttt 5788519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 6766813 - 6766692
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||  | |||| |||| |||| ||||||  | ||||| |||||||||| |||||||||||||||||||| |||||    
T  6766813 atactccctccgtttcaaaatacatgtcgcaattttacaatctgcattattcacataacttattttgaccatattttttaactaatgtataaatgcaaat 6766714  T
Q  239 attagcatgtaaaatgttgttt 260  Q
     ||||||||||| |||||||||    
T  6766713 gttagcatgtaagatgttgttt 6766692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 26161599 - 26161712
Alignment:
Q  143 tccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatatta 242  Q
    ||||||| ||||||||||||||||  |||| |  |||| ||||||||||  ||| ||| ||||||||| ||||||||||||| |||||||||||||||||    
T  26161599 tccctccatttcaaaatacatgtcacatttgtataatgcgcactattcacatgatttattttgaccatgctttttaactaatatataaatacaaatatta 26161698  T
Q  243 gcatgtaaaatgtt 256  Q
    ||||||||||||||    
T  26161699 gcatgtaaaatgtt 26161712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 36341620 - 36341739
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||| | ||||||||||||||||||  |||||||||||||||||||||||  ||||||| ||| || |||||||||||||||  |||||||| ||||     
T  36341620 tactccattcgtttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttaatttaacgatactttttaactaacatataaatataaatg 36341719  T
Q  240 ttagcatgtaaaatgttgtt 259  Q
    |||| |||||| ||||||||    
T  36341720 ttagaatgtaagatgttgtt 36341739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 133 - 260
Target Start/End: Complemental strand, 4131772 - 4131645
Alignment:
Q  133 taatatatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaat 232  Q
    ||||||||||| | |||||||||||||| |||||  | |||| ||||||  ||||||||  | ||||||||| |||||| |||||||||||| |||||||    
T  4131772 taatatatacttcatccgtttcaaaatatatgtcgcaattttacaatgtatactattcacataacttactttaaccatattttttaactaatatataaat 4131673  T
Q  233 acaaatattagcatgtaaaatgttgttt 260  Q
    |||||  ||||||||||| |||||||||    
T  4131672 acaaaagttagcatgtaagatgttgttt 4131645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 137 - 256
Target Start/End: Original strand, 7169123 - 7169242
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaa 236  Q
    |||||| || ||||||||||||||||||||  | ||||||||||||   ||||||  ||| |||||||||| ||| |||||||||||| |||||||||||    
T  7169123 atatacaccatccgtttcaaaatacatgtcataattttgcaatgtgtcatattcacatgatttactttgactatattttttaactaatatataaatacaa 7169222  T
Q  237 atattagcatgtaaaatgtt 256  Q
    |||||| ||| ||| |||||    
T  7169223 atattaacatataagatgtt 7169242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 260
Target Start/End: Complemental strand, 27045663 - 27045550
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 246  Q
    |||||||||||||||||||   | |||| ||||||  ||||||||  ||  |||||||||||||| |||||||||||| ||||||||||||| |||||||    
T  27045663 tccgtttcaaaatacatgttgcaattttacaatgtatactattcacatggtttactttgaccatattttttaactaatatataaatacaaatgttagcat 27045564  T
Q  247 gtaaaatgttgttt 260  Q
     ||| |||||||||    
T  27045563 ataagatgttgttt 27045550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 49110732 - 49110612
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||| ||||||| ||||||||||||  | ||||  |||||| ||||||||  ||| |||||||||||||| |||||||||||| ||| |||||||||     
T  49110732 tactccatccgttttaaaatacatgtcacaattttataatgtgtactattcaaatgatttactttgaccatattttttaactaatatattaatacaaatg 49110633  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    |||  ||||||||| ||||||    
T  49110632 ttatgatgtaaaatattgttt 49110612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 258
Target Start/End: Complemental strand, 35570316 - 35570193
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccata-----ctttttaactaatgtataaatac 234  Q
    ||||| |||||||||||||||||||||  | |||| ||||||||||||||||    ||||||||||||||||      |||||||||||| || ||||||    
T  35570316 tactcactccgtttcaaaatacatgtcgcaattttacaatgtgcactattcacaaaacttactttgaccatatttttttttttaactaatatacaaatac 35570217  T
Q  235 aaatattagcatgtaaaatgttgt 258  Q
    |||| ||||||||||| |||||||    
T  35570216 aaattttagcatgtaagatgttgt 35570193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 42662194 - 42662284
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||  | |||||||||||| | ||||||  |  |||||||||||||||||||||||||||| |||||||||||||    
T  42662194 tccgtttcaaaatacatgtcgcaattttgcaatgtgtattattcacatt-cttactttgaccatactttttaactaatatataaatacaaat 42662284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 45331915 - 45331992
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaac 220  Q
    ||||||||||||||||||| ||||||   ||||||||||| |||| ||||||| |||||||||||||||||| ||||||||    
T  45331915 tactccctccgtttcaaaacacatgt---atttttgcaatatgcattattcatatgacttactttgaccatattttttaac 45331992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 3785520 - 3785623
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||| ||||||||||||||||||| ||  | |||  |||| |||||||||||| |   |||||||||||||| |||||||||||| |||||||||||||     
T  3785520 tacttcctccgtttcaaaatacatatcataatttcacaatatgcactattcatatagtttactttgaccatattttttaactaatatataaatacaaatg 3785619  T
Q  240 ttag 243  Q
    ||||    
T  3785620 ttag 3785623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 256
Target Start/End: Complemental strand, 16870745 - 16870626
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaa 236  Q
    ||||||| |||| ||| |||||||||||||    |||| |||| |||||||||||  | |||||||||||||||| || ||||||||| |||||||| ||    
T  16870745 atatacttcctctgttccaaaatacatgtcgcggttttacaatatgcactattcaaataacttactttgaccatatttgttaactaatatataaatataa 16870646  T
Q  237 atattagcatgtaaaatgtt 256  Q
    || || ||| ||||||||||    
T  16870645 atgtttgcacgtaaaatgtt 16870626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 21379817 - 21379864
Alignment:
Q  213 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  21379817 tttttagctaatgtataaatacaaatattagcatgtaagatgttgttt 21379864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 260
Target Start/End: Complemental strand, 49102063 - 49101955
Alignment:
Q  152 ttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaa 251  Q
    ||||||||||||||   | |||| |||| |||||||||||| | ||||| |||   |||| ||||||||||||  |||||||||||| || ||||||||     
T  49102063 ttcaaaatacatgttacaattttacaatatgcactattcatataacttatttttgtcatattttttaactaatacataaatacaaatttttgcatgtaag 49101964  T
Q  252 atgttgttt 260  Q
    |||||||||    
T  49101963 atgttgttt 49101955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 248
Target Start/End: Complemental strand, 23707612 - 23707577
Alignment:
Q  213 tttttaactaatgtataaatacaaatattagcatgt 248  Q
    ||||||||||||||||||||||||||||||||||||    
T  23707612 tttttaactaatgtataaatacaaatattagcatgt 23707577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 38767265 - 38767202
Alignment:
Q  196 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtt 259  Q
    |||||||||||||||| |||||||||||| ||||||||||||| | || || ||| ||||||||    
T  38767265 acttactttgaccatattttttaactaatatataaatacaaatgtcagtatataagatgttgtt 38767202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 34750556 - 34750618
Alignment:
Q  194 tgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 256  Q
    ||||||||||||||| ||||||||||||||| || ||||| |||| ||| ||||||| |||||    
T  34750556 tgacttactttgaccctactttttaactaatatacaaataaaaatgttaacatgtaagatgtt 34750618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 37467511 - 37467463
Alignment:
Q  198 ttactttgaccatactttttaactaatgtataaatacaaatattagcat 246  Q
    ||||||| |||||| |||||||||||| ||||||||||||| |||||||    
T  37467511 ttactttaaccatattttttaactaatatataaatacaaatgttagcat 37467463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 23707773 - 23707714
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttga 206  Q
    ||||||| |||||| |||  ||||||||||||| ||| |||||||||||| |||||||||    
T  23707773 tccgttttaaaatatatgatcaatttttgcaatttgcgctattcatttgatttactttga 23707714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 36515839 - 36515958
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||||||   |||||||||||  | |||  ||||||| ||||||||    ||||||||| |||||| |||||||  ||| |||||||||||||     
T  36515839 tactccctccgttcgtaaatacatgtcgcaatttaacaatgtgtactattcacacaacttactttaaccatattttttaatcaatatataaatacaaatg 36515938  T
Q  240 ttagcatgtaaaatgttgtt 259  Q
    |||| || ||| ||||||||    
T  36515939 ttagtatataagatgttgtt 36515958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 168
Target Start/End: Original strand, 10981506 - 10981536
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||||    
T  10981506 tatactccctccgtttcaaaatacatgtcca 10981536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Original strand, 25566547 - 25566577
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||    
T  25566547 atactccctccgtttcaaaatacatgtccaa 25566577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Original strand, 28061514 - 28061544
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||    
T  28061514 atactccctccgtttcaaaatacatgtccaa 28061544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Complemental strand, 41898251 - 41898221
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||    
T  41898251 atactccctccgtttcaaaatacatgtccaa 41898221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Complemental strand, 47156290 - 47156260
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||    
T  47156290 atactccctccgtttcaaaatacatgtccaa 47156260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 166
Target Start/End: Original strand, 2910856 - 2910885
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtc 166  Q
    ||||||||||||||||||||||||||||||    
T  2910856 atatactccctccgtttcaaaatacatgtc 2910885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Complemental strand, 25060187 - 25060158
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  25060187 atactccctccgtttcaaaatacatgtcca 25060158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Original strand, 27813810 - 27813839
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  27813810 atactccctccgtttcaaaatacatgtcca 27813839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Complemental strand, 36623570 - 36623541
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  36623570 tactccctccgtttcaaaatacatgtccaa 36623541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Original strand, 46103370 - 46103399
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  46103370 tactccctccgtttcaaaatacatgtccaa 46103399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 2952421 - 2952521
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccata-ctttttaactaatgtataaatacaaa 237  Q
    ||||||| ||||||||||||||| |||   | |||| ||| ||||| ||||||  |  |||||||||||||||  |||||||||||| |||||||| |||    
T  2952421 atactccatccgtttcaaaatacgtgttgcaattttacaacgtgcattattcacgtagcttactttgaccatatttttttaactaatttataaatataaa 2952520  T
Q  238 t 238  Q
    |    
T  2952521 t 2952521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 169
Target Start/End: Complemental strand, 48602697 - 48602669
Alignment:
Q  141 actccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||    
T  48602697 actccctccgtttcaaaatacatgtccaa 48602669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 4147930 - 4148051
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4147930 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 4148029  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  4148030 attagcatgtaagatgttgttt 4148051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 137 - 260
Target Start/End: Complemental strand, 18668953 - 18668830
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaa 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  18668953 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttgctttgaccatattttttaactaatgtataaatacaa 18668854  T
Q  237 atattagcatgtaaaatgttgttt 260  Q
    |||||||||||||| |||||||||    
T  18668853 atattagcatgtaagatgttgttt 18668830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 138 - 260
Target Start/End: Complemental strand, 19088222 - 19088100
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||    
T  19088222 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaa 19088123  T
Q  238 tattagcatgtaaaatgttgttt 260  Q
    ||||||||||||| |||||||||    
T  19088122 tattagcatgtaagatgttgttt 19088100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 32414942 - 32414821
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  32414942 atactccctccgtttcaaaatacatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 32414843  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  32414842 attagcatgtaagatgttgttt 32414821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 22054772 - 22054892
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22054772 tactctctccgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 22054871  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  22054872 ttagcatgtaagatgttgttt 22054892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 24624203 - 24624083
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  24624203 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 24624104  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  24624103 ttagcatgtaagatgttgttt 24624083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 17214047 - 17213926
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  17214047 atactccctccatttcaaaatacatgtctaatttttgcaatgtgcactattcatttgacttactttgactatactttttaactaatttataaatacaaat 17213948  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  17213947 attagcatgtaagatgttgttt 17213926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 20226561 - 20226440
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20226561 atactccctatgtttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 20226462  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| | |||||||    
T  20226461 attagcatgtaagacgttgttt 20226440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 22120545 - 22120424
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22120545 atactccctatgtttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 22120446  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| | |||||||    
T  22120445 attagcatgtaagacgttgttt 22120424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 32671815 - 32671936
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||    
T  32671815 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaat 32671914  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||| ||||| |||||||||    
T  32671915 attagcgtgtaagatgttgttt 32671936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 6563226 - 6563346
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||    
T  6563226 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatatataaatacaaata 6563325  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  6563326 ttagcatgtaagatgttgttt 6563346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 138 - 260
Target Start/End: Complemental strand, 15383194 - 15383072
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    |||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  15383194 tatacttcgtccgtttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttaaccatactttttaactaatctataaatacaaa 15383095  T
Q  238 tattagcatgtaaaatgttgttt 260  Q
    ||||||||||||| |||||||||    
T  15383094 tattagcatgtaagatgttgttt 15383072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 17257914 - 17257793
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  17257914 atactccatctgtttcaaaatacatgtctaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtacaaatacaaat 17257815  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  17257814 attagcatgtaagatgttgttt 17257793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 138 - 260
Target Start/End: Complemental strand, 3989527 - 3989406
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    |||| ||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||     
T  3989527 tatattccttccgttacaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgt-taaatacaac 3989429  T
Q  238 tattagcatgtaaaatgttgttt 260  Q
    ||||||||||||| |||||||||    
T  3989428 tattagcatgtaagatgttgttt 3989406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 10520468 - 10520588
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||| ||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| | |||||||||||||||||||| |||    
T  10520468 tactccttccgtttcaaaatacatgttcaatttttgcaatgtgtattattcatttgacttactttgaccatacctattaactaatgtataaatacagata 10520567  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    |||  ||||||||||||||||    
T  10520568 ttaatatgtaaaatgttgttt 10520588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 25476070 - 25475955
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||     |    
T  25476070 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccttactttttaactaatgtataaata-----a 25475976  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  25475975 ttagcatgtaagatgttgttt 25475955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 31569280 - 31569178
Alignment:
Q  148 ccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatg 247  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||| | ||||||||||||||||||||||| |||    
T  31569280 ccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgactatacttttttattaatgtataaatacaaatattagaatg 31569181  T
Q  248 taa 250  Q
    |||    
T  31569180 taa 31569178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 170 - 260
Target Start/End: Original strand, 1040854 - 1040944
Alignment:
Q  170 tttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  1040854 tttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatattaacatgtaagatgttgttt 1040944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 20437277 - 20437155
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccata-ctttttaactaatgtataaatacaaa 237  Q
    ||||||| |||||||  ||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||||    
T  20437277 atactccatccgttttcaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgatcatatttttttaactaatgtataaatacaaa 20437178  T
Q  238 tattagcatgtaaaatgttgttt 260  Q
    ||| | ||||||| |||||||||    
T  20437177 tatcaacatgtaagatgttgttt 20437155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 21540880 - 21540775
Alignment:
Q  151 tttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 250  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||  ||||||    
T  21540880 tttcaaaatacatgtttaatttttacaatgtgcactattcatttgacttactttgaccatacttttaaactagtttataaatacaaatattataatgtaa 21540781  T
Q  251 aatgtt 256  Q
    ||||||    
T  21540780 aatgtt 21540775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 260
Target Start/End: Original strand, 29790203 - 29790326
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaa 236  Q
    ||||||||| || |||||||||||||||||  | |||||||||||  ||||||||  |||||||||| ||||||| |||||||||||| |||||||||||    
T  29790203 atatactccatctgtttcaaaatacatgtcgcaattttgcaatgtatactattcacatgacttacttggaccataatttttaactaatatataaatacaa 29790302  T
Q  237 atattagcatgtaaaatgttgttt 260  Q
    ||||||||||||||  ||||||||    
T  29790303 atattagcatgtaagttgttgttt 29790326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 260
Target Start/End: Original strand, 28477764 - 28477873
Alignment:
Q  151 tttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 250  Q
    ||||||||||||||||  | |||||||||||| ||||||||  |||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  28477764 tttcaaaatacatgtcacaattttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatattagcatgtaa 28477863  T
Q  251 aatgttgttt 260  Q
      ||||||||    
T  28477864 gttgttgttt 28477873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 4440851 - 4440969
Alignment:
Q  141 actccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatat 240  Q
    |||| ||||||||||||||| ||||   ||||||| |||||||||||||||| | |||||||||||||||||||||||  |||  ||||||||||||| |    
T  4440851 actctctccgtttcaaaatatatgttgcatttttgtaatgtgcactattcatataacttactttgaccatactttttaggtaacatataaatacaaatgt 4440950  T
Q  241 tagcatgtaaaatgttgtt 259  Q
    |||||||||| ||||||||    
T  4440951 tagcatgtaagatgttgtt 4440969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 15337498 - 15337608
Alignment:
Q  150 gtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 249  Q
    |||||||||||||| ||  | |||| |||| |||| ||||||  | |||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  15337498 gtttcaaaatacatttcacaattttacaatatgcattattcacataacttactttgaccatattttttaactaatatataaatacaaatattagcatgta 15337597  T
Q  250 aaatgttgttt 260  Q
    |||||||||||    
T  15337598 aaatgttgttt 15337608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 24955653 - 24955538
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||||||||||||||||||||      | |||||||| |||||||| |||||| |||||||| ||||| |||| ||||||||||||| ||||||||||||    
T  24955653 atactccctccgtttcaaaat------ctaatttttgtaatgtgcattattcacttgacttattttgatcatattttttaactaatgaataaatacaaat 24955560  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  24955559 attagcatgtaagatgttgttt 24955538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 250
Target Start/End: Original strand, 29693894 - 29693993
Alignment:
Q  151 tttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 250  Q
    ||||||||||||||||  | |||||||||||| ||||||||  |||||| ||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  29693894 tttcaaaatacatgtcacaattttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatactagcatgtaa 29693993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 151 - 260
Target Start/End: Original strand, 12225986 - 12226095
Alignment:
Q  151 tttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 250  Q
    ||||||||||||| || |||||||   ||| || ||||||| | |||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  12225986 tttcaaaatacatatctaatttttatgatgcgcgctattcactggacttattttgatcatactttttaactaatgtataaatataaatattagcatgtaa 12226085  T
Q  251 aatgttgttt 260  Q
     || ||||||    
T  12226086 gatattgttt 12226095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 259
Target Start/End: Original strand, 17155158 - 17155268
Alignment:
Q  149 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 248  Q
    ||||||||||||||||||   |||||  ||||| |||||||||  |||| |||||||| |||||||  |||||||  ||||||||||||| |||||||||    
T  17155158 cgtttcaaaatacatgtcgtttttttaaaatgttcactattcacatgacctactttgatcatacttcataactaacatataaatacaaatgttagcatgt 17155257  T
Q  249 aaaatgttgtt 259  Q
    || ||||||||    
T  17155258 aagatgttgtt 17155268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 31869714 - 31869824
Alignment:
Q  146 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 245  Q
    |||||||||||||||||||||    |||| |||||| ||||||||   | | |||||||||||||  |||||||||||| ||||||||||||| ||||||    
T  31869714 ctccgtttcaaaatacatgtcgcgattttacaatgtacactattcccataatttactttgaccattttttttaactaatatataaatacaaatgttagca 31869813  T
Q  246 tgtaaaatgtt 256  Q
    ||||| |||||    
T  31869814 tgtaagatgtt 31869824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 2360027 - 2360110
Alignment:
Q  177 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||| |||||| || | | |||||||||| ||| |||||||||||| |||||||| |||| |||||||||||||||||||||    
T  2360027 aatgtgtactatttatataatttactttgactataatttttaactaatatataaataaaaatgttagcatgtaaaatgttgttt 2360110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 256
Target Start/End: Complemental strand, 10298798 - 10298719
Alignment:
Q  177 aatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 256  Q
    |||||||||||||||  |  |||| |||||||||| ||||| |||||| ||||||||||||| |||||||||||||||||    
T  10298798 aatgtgcactattcacatagcttaatttgaccatattttttcactaatatataaatacaaatgttagcatgtaaaatgtt 10298719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 16193101 - 16193052
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactat 188  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  16193101 atactccctccattttaaaatacatgtccaatttttgcaatgtgcactat 16193052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 23158115 - 23158051
Alignment:
Q  196 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||||||||||| | |||||||||||| ||||||||||||| ||| ||||||| |||||||||    
T  23158115 acttactttgaccacattttttaactaatatataaatacaaatgttaacatgtaagatgttgttt 23158051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 250
Target Start/End: Complemental strand, 19240823 - 19240744
Alignment:
Q  171 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 250  Q
    |||||||||||  ||||||||  | ||||| |||||||||| |||||||||||| |||||||||||||||| ||| ||||    
T  19240823 ttttgcaatgtatactattcacataacttattttgaccatattttttaactaatatataaatacaaatatttgcaagtaa 19240744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 3623913 - 3623856
Alignment:
Q  198 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 256  Q
    |||||||||||||| |||||||||||| ||||||||||||| ||||||||||| |||||    
T  3623913 ttactttgaccata-tttttaactaatatataaatacaaatgttagcatgtaagatgtt 3623856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 174
Target Start/End: Complemental strand, 32420783 - 32420748
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaattttt 174  Q
    ||||||||||||||||||||||||||||||||||||    
T  32420783 atactccctccgtttcaaaatacatgtccaattttt 32420748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 250
Target Start/End: Complemental strand, 14214166 - 14214065
Alignment:
Q  149 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 248  Q
    ||||| ||||||||||||  | ||||  |||||||| |||||||  |||||  ||||||| || |||||||| ||| |||||||| |||| |||||||||    
T  14214166 cgttttaaaatacatgtcgcaattttataatgtgcattattcatccgacttgttttgaccgtattttttaaccaatatataaatataaatgttagcatgt 14214067  T
Q  249 aa 250  Q
    ||    
T  14214066 aa 14214065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 8101664 - 8101716
Alignment:
Q  204 tgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 256  Q
    |||||||| |||||||||||| ||||||||||||| ||| ||||||| |||||    
T  8101664 tgaccatattttttaactaatatataaatacaaatgttaacatgtaagatgtt 8101716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 17942436 - 17942476
Alignment:
Q  133 taatatatactccctccgtttcaaaatacatgtccaatttt 173  Q
    ||||||||||||||| |||||||||||||||||||| ||||    
T  17942436 taatatatactcccttcgtttcaaaatacatgtccattttt 17942476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 19996318 - 19996350
Alignment:
Q  136 tatatactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||||||    
T  19996318 tatatactccctccgtttcaaaatacatgtcca 19996350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 20437014 - 20437046
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||||    
T  20437014 atatactccctccgtttcaaaatacatgtccaa 20437046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 24623938 - 24623970
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||||    
T  24623938 atatactccctccgtttcaaaatacatgtccaa 24623970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 5495322 - 5495369
Alignment:
Q  213 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||||||||| ||||||||||||| ||||||||||| || ||||||    
T  5495322 tttttaactaatatataaatacaaatgttagcatgtaagattttgttt 5495369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 169
Target Start/End: Original strand, 19087956 - 19087987
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||||    
T  19087956 tatactccctccgtttcaaaatacatgtccaa 19087987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 1260490 - 1260540
Alignment:
Q  200 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 250  Q
    |||||||||||| |||||||||||| ||||||||||| | |||||| ||||    
T  1260490 actttgaccatattttttaactaatatataaatacaattgttagcacgtaa 1260540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 168
Target Start/End: Original strand, 1605577 - 1605607
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||||    
T  1605577 tatactccctccgtttcaaaatacatgtcca 1605607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 168
Target Start/End: Original strand, 7761299 - 7761329
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||||    
T  7761299 tatactccctccgtttcaaaatacatgtcca 7761329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Original strand, 18668687 - 18668717
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||    
T  18668687 atactccctccgtttcaaaatacatgtccaa 18668717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 168
Target Start/End: Original strand, 29260190 - 29260220
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||||    
T  29260190 tatactccctccgtttcaaaatacatgtcca 29260220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Complemental strand, 15064972 - 15064943
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  15064972 atactccctccgtttcaaaatacatgtcca 15064943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Complemental strand, 22055034 - 22055005
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  22055034 tactccctccgtttcaaaatacatgtccaa 22055005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Original strand, 8626482 - 8626510
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  8626482 tactccctccgtttcaaaatacatgtcca 8626510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 26567351 - 26567287
Alignment:
Q  196 acttactttgaccatacttttt-aactaatgtataaatacaaatattagcatgtaaaatgttgtt 259  Q
    ||||||||||| |||| ||||| ||||||| |||||||| ||||  |||||||||||| ||||||    
T  26567351 acttactttgatcatatttttttaactaatatataaatataaatggtagcatgtaaaacgttgtt 26567287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 2e-55; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 42490459 - 42490338
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  42490459 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 42490360  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  42490359 attagcatgtaagatgttgttt 42490338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 13499597 - 13499477
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  13499597 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 13499498  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  13499497 ttagcatgtaagatgttgttt 13499477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 27010737 - 27010616
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||    
T  27010737 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaat 27010638  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  27010637 attagcatgtaagatgttgttt 27010616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 39866404 - 39866283
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  39866404 atactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 39866305  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  39866304 attagcatgtaagatgttgttt 39866283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 42761745 - 42761625
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  42761745 tactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 42761646  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  42761645 ttagcatgtaagatgttgttt 42761625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 27334994 - 27334873
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  27334994 atactccttccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 27334895  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  27334894 attagcatgtaagatgttgttt 27334873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 21797556 - 21797676
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  21797556 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttattttgaccatactttttaactaatgtataaatacaaata 21797655  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  21797656 ttagcatgtaagatgttgttt 21797676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 34912405 - 34912286
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34912405 ataccccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 34912306  T
Q  239 attagcatgtaaaatgttgt 258  Q
    |||||  ||||| |||||||    
T  34912305 attagattgtaagatgttgt 34912286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 20765195 - 20765316
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||    
T  20765195 atactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaat 20765294  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||| ||||||| |||||||||    
T  20765295 attaacatgtaagatgttgttt 20765316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 33415798 - 33415919
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||||||||| ||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  33415798 atactccctctgtttcaaaatacatgtccaatttttgcaatgtgcgttatttatttgacttactttgaccatactttttaactaatatataaatacaaat 33415897  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  33415898 attagcatgtaagatgttgttt 33415919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 137 - 260
Target Start/End: Original strand, 21005290 - 21005413
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaa 236  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| || |||||||||||||||||||||||| |||| |||||||| ||    
T  21005290 atatactccctccgtttcaaaatacatgttcaatttttgcaacgtgcactattcacttcacttactttgaccatactttttaattaatatataaatataa 21005389  T
Q  237 atattagcatgtaaaatgttgttt 260  Q
    |||||||||||||| |||||||||    
T  21005390 atattagcatgtaagatgttgttt 21005413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 140 - 233
Target Start/End: Original strand, 19823900 - 19823993
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaata 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19823900 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaata 19823993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 36227544 - 36227665
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  36227544 atactccctccgttttaaaatgcatgttcaatttttgcaatgcgcactattcatttgacttactttgaccatatttttcaattaatgtataaatacaaat 36227643  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  36227644 attagcatgtaagatgttgttt 36227665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 6910333 - 6910454
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||||||| |||||||||||||||||||||| |||| |||||| ||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  6910333 atactccccccgtttcaaaatacatgtccaacttttacaatgtacactattcacttgacttactttaaccatattttttaactaatgtataaatacaaat 6910432  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||| ||||||| |||||||||    
T  6910433 attaacatgtaagatgttgttt 6910454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 43468005 - 43467884
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||||| ||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||| | |||    
T  43468005 atactctctccgtttcaaaatacatgaccaatttttgcaatgtgtactattcacttgacttactttgaccatactttttaactgatgtataaattctaat 43467906  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    ||||||| |||| |||||||||    
T  43467905 attagcaggtaagatgttgttt 43467884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 54507641 - 54507761
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||| |||||  ||||||||||||||||||||||||||| |||    
T  54507641 tacttcctccgtttcaaaatacatatccaatttttgcaatatgcactattcacttgacttattttgattatactttttaactaatgtataaatacagata 54507740  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  54507741 ttagcatgtaagatgttgttt 54507761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 151 - 260
Target Start/End: Original strand, 33803532 - 33803642
Alignment:
Q  151 tttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatac-tttttaactaatgtataaatacaaatattagcatgta 249  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||    
T  33803532 tttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatacttttttaactaatgtataaatataaatattagcttgta 33803631  T
Q  250 aaatgttgttt 260  Q
    | |||||||||    
T  33803632 agatgttgttt 33803642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 45613571 - 45613662
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtata 229  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  45613571 tatactccatccgtttcaaaattcatgtccaatttttgcaatgtgcactatttacttgacttactttgactatactttttaactaatgtata 45613662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 43181618 - 43181497
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatact-ttttaactaatgtataaatacaaat 238  Q
    |||||| ||||||| |||||||||||  |||||| | ||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||| ||||    
T  43181618 tactccatccgtttaaaaatacatgtttaattttcgtaatgtgcactattcacttgatttactttgaccatacttttttaactaatgtataaatataaat 43181519  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    ||||| |||||| |||||||||    
T  43181518 attagtatgtaagatgttgttt 43181497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 181 - 260
Target Start/End: Original strand, 30213845 - 30213924
Alignment:
Q  181 tgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  30213845 tgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 30213924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 44561784 - 44561903
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||| | |||||||||||||||||   || ||||||||||||||||||||  ||||||||||||||||||||||||||||||  |||||||||||||     
T  44561784 tactcctttcgtttcaaaatacatgttgcatgtttgcaatgtgcactattcacatgacttactttgaccatactttttaactaacatataaatacaaatg 44561883  T
Q  240 ttagcatgtaaaatgttgtt 259  Q
    ||  ||||||| ||||||||    
T  44561884 ttgacatgtaagatgttgtt 44561903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 260
Target Start/End: Original strand, 38137854 - 38137944
Alignment:
Q  170 tttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||||||| ||||||||||  |||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  38137854 tttttgcaatctgcactattcgcttgatttattttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 38137944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 3430521 - 3430420
Alignment:
Q  155 aaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatg 254  Q
    |||||||||||   | |||| |||||||||||||| || | |||||||||||||||| |||||||||||| ||| |||| ||||||||||||||||||||    
T  3430521 aaaatacatgttgcaattttacaatgtgcactatttatataacttactttgaccatattttttaactaatatattaataaaaatattagcatgtaaaatg 3430422  T
Q  255 tt 256  Q
    ||    
T  3430421 tt 3430420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 15333069 - 15332948
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||| || |||| ||||||||||||  | |||| ||||||||||||||||  |  ||| ||||||||| | |||||||||||| |||||||||||||    
T  15333069 atactccttctgttttaaaatacatgtcgcaattttacaatgtgcactattcacatagcttgctttgaccaaattttttaactaatatataaatacaaat 15332970  T
Q  239 attagcatgtaaaatgttgttt 260  Q
     ||||||||||| |||||||||    
T  15332969 gttagcatgtaagatgttgttt 15332948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 25527412 - 25527520
Alignment:
Q  146 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 245  Q
    ||||||||| |||||||||||  ||||||||||||||   ||||||  |||||||||| ||||||| ||||||||| || ||||||||||||||||| ||    
T  25527412 ctccgtttcgaaatacatgtcgcatttttgcaatgtga--tattcacatgacttacttcgaccatattttttaactgatatataaatacaaatattaaca 25527509  T
Q  246 tgtaaaatgtt 256  Q
    ||||| |||||    
T  25527510 tgtaagatgtt 25527520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 141 - 256
Target Start/End: Complemental strand, 41253024 - 41252909
Alignment:
Q  141 actccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatat 240  Q
    ||||| || ||||||||||| |||||  | |||| ||||||||||||||||| |  |||||||| |||||| |||||||||||| ||||||||||||| |    
T  41253024 actccatctgtttcaaaatatatgtcgcaattttacaatgtgcactattcatatagcttactttaaccatattttttaactaatatataaatacaaatgt 41252925  T
Q  241 tagcatgtaaaatgtt 256  Q
    |||||| ||| |||||    
T  41252924 tagcatataagatgtt 41252909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 260
Target Start/End: Original strand, 52167240 - 52167329
Alignment:
Q  171 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||| |||||| | ||||||| ||||||  |||||||||||||||||| |||| |||||||||||||||||  |||||| |||||||||    
T  52167240 ttttgtaatgtgtattattcatatgacttcttttgaccatactttttaattaatatataaatacaaatattaatatgtaagatgttgttt 52167329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 32220862 - 32220930
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgac 207  Q
    ||||||| ||||||| |||||||||||  ||||||||||||||| |||||||| |||||||||||||||    
T  32220862 atactccatccgttttaaaatacatgtttaatttttgcaatgtgtactattcacttgacttactttgac 32220930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 260
Target Start/End: Complemental strand, 48334788 - 48334663
Alignment:
Q  134 aatatatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaata 233  Q
    ||||| |||||||||||||| ||||||||| ||  | |||| |||||| || ||||||  |   ||||||| |||||  |||||||||| | ||||||||    
T  48334788 aatatttactccctccgttttaaaatacatctcgtaattttacaatgtacattattcacatagtttactttaaccattttttttaacta-tatataaata 48334690  T
Q  234 caaatattagcatgtaaaatgttgttt 260  Q
    ||||||||||||||||| |||||||||    
T  48334689 caaatattagcatgtaagatgttgttt 48334663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 260
Target Start/End: Original strand, 22786635 - 22786748
Alignment:
Q  145 cctccgtttcaaaatacatgtc-caatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattag 243  Q
    ||||||||||||| |||||||| ||||||||  |||||||||||||||  |  |||||||||||  || |||||||||||| |||||  |||||| || |    
T  22786635 cctccgtttcaaactacatgtcgcaattttt-taatgtgcactattcacatagcttactttgactctattttttaactaatatataa--acaaatgtttg 22786731  T
Q  244 catgtaaaatgttgttt 260  Q
    ||||||| |||||||||    
T  22786732 catgtaagatgttgttt 22786748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 256
Target Start/End: Complemental strand, 23940625 - 23940508
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||||| |||||||| ||||||||||||  | |||| ||| ||| ||| ||||| | | |||| |||||| || |||||||||||| |||||||| ||||    
T  23940625 atactctctccgttttaaaatacatgtcgcaattttacaacgtgtacttttcatataatttacattgaccttattttttaactaatatataaataaaaat 23940526  T
Q  239 attagcatgtaaaatgtt 256  Q
     ||| ||||||| |||||    
T  23940525 gttaacatgtaagatgtt 23940508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 44856400 - 44856465
Alignment:
Q  194 tgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtt 259  Q
    ||||||||||| || |||||||||||||||  ||||||||||||| |||| |||||| ||||||||    
T  44856400 tgacttactttaactatactttttaactaacatataaatacaaatgttagtatgtaagatgttgtt 44856465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 260
Target Start/End: Original strand, 22782271 - 22782384
Alignment:
Q  145 cctccgtttcaaaatacatgtc-caatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattag 243  Q
    ||||||||||||| |||||||| ||||||||  |||||||||||||||  |  |||||||||||  || |||||||||||  |||||  |||||| || |    
T  22782271 cctccgtttcaaactacatgtcgcaattttt-taatgtgcactattcacatagcttactttgactctattttttaactaaaatataa--acaaatgtttg 22782367  T
Q  244 catgtaaaatgttgttt 260  Q
    ||||||| |||||||||    
T  22782368 catgtaagatgttgttt 22782384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 36881273 - 36881310
Alignment:
Q  131 actaatatatactccctccgtttcaaaatacatgtcca 168  Q
    |||||||| |||||||||||||||||||||||||||||    
T  36881273 actaatatttactccctccgtttcaaaatacatgtcca 36881310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 41751613 - 41751552
Alignment:
Q  199 tactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||||| |||| |||||||||||| ||||||||||||| ||||||| ||  |||||||||    
T  41751613 tactttgatcatattttttaactaatatataaatacaaatgttagcatttacgatgttgttt 41751552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 27010471 - 27010503
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||||    
T  27010471 atatactccctccgtttcaaaatacatgtccaa 27010503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 168
Target Start/End: Original strand, 12094580 - 12094610
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||||    
T  12094580 tatactccctccgtttcaaaatacatgtcca 12094610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 17643789 - 17643851
Alignment:
Q  198 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||| |||| ||| |||||||||||| | ||||||||||| ||||||||||| || ||||||    
T  17643789 ttactgtgactatattttttaactaatatgtaaatacaaatgttagcatgtaagatattgttt 17643851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 27813511 - 27813445
Alignment:
Q  179 tgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 245  Q
    |||||||||||||  |  |||| |||||| ||| |||||||||||| ||||||||||||| ||||||    
T  27813511 tgtgcactattcacatagcttattttgactatattttttaactaatatataaatacaaatgttagca 27813445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 33128125 - 33128071
Alignment:
Q  196 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 250  Q
    ||||| ||||| |||||||||||||||||  ||||||| |||||||| |||||||    
T  33128125 acttattttgatcatactttttaactaatacataaatataaatattaacatgtaa 33128071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 42049784 - 42049858
Alignment:
Q  143 tccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatacttttt 217  Q
    |||||||||| ||||||||||| |  ||||||||||||||||| ||| |  |||| ||||||||| ||| |||||    
T  42049784 tccctccgttccaaaatacatgccgcatttttgcaatgtgcacaatttacatgacatactttgactatatttttt 42049858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Complemental strand, 6910596 - 6910567
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  6910596 tactccctccgtttcaaaatacatgtccaa 6910567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 165
Target Start/End: Original strand, 13364839 - 13364868
Alignment:
Q  136 tatatactccctccgtttcaaaatacatgt 165  Q
    ||||||||||||||||||||||||||||||    
T  13364839 tatatactccctccgtttcaaaatacatgt 13364868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Complemental strand, 19241946 - 19241917
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  19241946 atactccctccgtttcaaaatacatgtcca 19241917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Complemental strand, 19912216 - 19912187
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  19912216 atactccctccgtttcaaaatacatgtcca 19912187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Complemental strand, 20765458 - 20765429
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  20765458 tactccctccgtttcaaaatacatgtccaa 20765429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 23224361 - 23224308
Alignment:
Q  198 ttactttgaccatacttttt-aactaatgtataaatacaaatattagcatgtaa 250  Q
    |||||||||| ||||||||| ||||||| ||||||| |||||||||| ||||||    
T  23224361 ttactttgactatacttttttaactaatatataaatgcaaatattagaatgtaa 23224308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Original strand, 29375137 - 29375166
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  29375137 atactccctccgtttcaaaatacatgtcca 29375166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 37766043 - 37766096
Alignment:
Q  136 tatatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactatt 189  Q
    |||||||||| ||| |||||||||||| |||  || ||||||||||||||||||    
T  37766043 tatatactccatccatttcaaaatacacgtctcatatttgcaatgtgcactatt 37766096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Complemental strand, 38806383 - 38806354
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  38806383 atactccctccgtttcaaaatacatgtcca 38806354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Original strand, 42761483 - 42761512
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  42761483 tactccctccgtttcaaaatacatgtccaa 42761512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Original strand, 198855 - 198883
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  198855 tactccctccgtttcaaaatacatgtcca 198883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 3017853 - 3017897
Alignment:
Q  202 tttgaccatactttttaactaatgtataaatacaaatattagcat 246  Q
    |||||||||| |||||||||| | ||||||||||||| |||||||    
T  3017853 tttgaccatattttttaactattatataaatacaaatgttagcat 3017897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 19327594 - 19327474
Alignment:
Q  138 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    |||||||||||| || |||||||| ||||  | | |  |||| |||||||||||  | ||||||||  |||||| ||||||||||||  ||| |||||||    
T  19327594 tatactccctccattccaaaatacgtgtcgtagtgtgacaatatgcactattcacataacttacttaaaccatattttttaactaatagatagatacaaa 19327495  T
Q  238 tattagcatgtaaaatgttgt 258  Q
    | |||| || ||| |||||||    
T  19327494 tgttaggatctaagatgttgt 19327474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 165
Target Start/End: Original strand, 27334728 - 27334756
Alignment:
Q  137 atatactccctccgtttcaaaatacatgt 165  Q
    |||||||||||||||||||||||||||||    
T  27334728 atatactccctccgtttcaaaatacatgt 27334756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 30057298 - 30057418
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||||||| || |||||||||||||||   |||||  ||| || || ||||||  | || |||||| |||||| |||||||||||| ||||||  |||||    
T  30057298 atactccccccatttcaaaatacatgtagtattttgacaacgttcattattcacataacatactttaaccatattttttaactaatatataaaagcaaat 30057397  T
Q  239 attagcatgtaaaatgttgtt 259  Q
     ||||||| ||| ||| ||||    
T  30057398 gttagcatataagatgatgtt 30057418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 165
Target Start/End: Original strand, 39866138 - 39866166
Alignment:
Q  137 atatactccctccgtttcaaaatacatgt 165  Q
    |||||||||||||||||||||||||||||    
T  39866138 atatactccctccgtttcaaaatacatgt 39866166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 19141329 - 19141208
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  19141329 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 19141230  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  19141229 attagcatgtaagatgttgttt 19141208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 139 - 256
Target Start/End: Original strand, 39358145 - 39358262
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39358145 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 39358244  T
Q  239 attagcatgtaaaatgtt 256  Q
    |||||||||||| |||||    
T  39358245 attagcatgtaagatgtt 39358262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 8042284 - 8042164
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  8042284 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 8042185  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  8042184 ttagcatgtaagatgttgttt 8042164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 142 - 260
Target Start/End: Original strand, 5404998 - 5405116
Alignment:
Q  142 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatatt 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5404998 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 5405097  T
Q  242 agcatgtaaaatgttgttt 260  Q
    ||||||||| |||||||||    
T  5405098 agcatgtaagatgttgttt 5405116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 139 - 256
Target Start/End: Complemental strand, 2183220 - 2183103
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  2183220 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtatgaatacaaat 2183121  T
Q  239 attagcatgtaaaatgtt 256  Q
    |||||||||||| |||||    
T  2183120 attagcatgtaagatgtt 2183103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 7608049 - 7608169
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  7608049 tactccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 7608148  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  7608149 ttagcatgtaagatgttgttt 7608169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 44365157 - 44365277
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44365157 tactctctccgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 44365256  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  44365257 ttagcatgtaagatgttgttt 44365277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 11841841 - 11841735
Alignment:
Q  154 caaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaat 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11841841 caaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagat 11841742  T
Q  254 gttgttt 260  Q
    |||||||    
T  11841741 gttgttt 11841735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 6223073 - 6223186
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 246  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  6223073 tccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaatattagcat 6223172  T
Q  247 gtaaaatgttgttt 260  Q
    |||| ||| |||||    
T  6223173 gtaagatgatgttt 6223186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 140 - 250
Target Start/End: Original strand, 19262680 - 19262790
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  19262680 tacttcctccgtttcaaaatacatgtccaattttttcaatgtgcactatttatttaacttactttgaccatattttttaactaatatataaatacaaata 19262779  T
Q  240 ttagcatgtaa 250  Q
    |||||||||||    
T  19262780 ttagcatgtaa 19262790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 7799847 - 7799967
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||||||||  ||||||||||||||| ||||||||||||||| |||||||||||||     
T  7799847 tactccctacgtttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttactttgaccctactttttaactaatatataaatacaaatg 7799946  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  7799947 ttagcatgtaagatgttgttt 7799967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 36072185 - 36072290
Alignment:
Q  151 tttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 250  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  36072185 tttcaaaatacatgtccaatttttacaatatgcactattcatttgacttactttgatcatattttttaactaatgtataaatataaatattagcatgtaa 36072284  T
Q  251 aatgtt 256  Q
     |||||    
T  36072285 gatgtt 36072290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 33607377 - 33607476
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  33607377 tactccctcc-tttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgattatactttttaactaatgtataaatacaaata 33607475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 260
Target Start/End: Complemental strand, 36719583 - 36719466
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaa 236  Q
    ||||||||| ||||||||||| ||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||     ||||||||||||    
T  36719583 atatactccttccgtttcaaa-tacatgtccaatttttgcaacaagcactattcacttgacttactttgaccatactttttaa-----gtataaatacaa 36719490  T
Q  237 atattagcatgtaaaatgttgttt 260  Q
    |||||||||| ||| |||||||||    
T  36719489 atattagcatttaagatgttgttt 36719466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 146 - 260
Target Start/End: Original strand, 32774597 - 32774711
Alignment:
Q  146 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 245  Q
    |||||||||||||||||||| ||| ||||  ||||||||||||| | |||||||||||||||||||||||||||||||| |||| ||| ||||||||  |    
T  32774597 ctccgtttcaaaatacatgttcaagttttataatgtgcactatttacttgacttactttgaccatactttttaactaatatatacatataaatattaata 32774696  T
Q  246 tgtaaaatgttgttt 260  Q
    ||||| |||||||||    
T  32774697 tgtaagatgttgttt 32774711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 11931701 - 11931811
Alignment:
Q  150 gtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 249  Q
    |||||||||||||||||  | |||| |||| |||| ||||||| | |||||||||||||||| |||||||||||| ||||||||||||| ||||||| ||    
T  11931701 gtttcaaaatacatgtcgcaattttacaatatgcattattcatataacttactttgaccatattttttaactaatatataaatacaaatgttagcattta 11931800  T
Q  250 aaatgttgttt 260  Q
    | |||||||||    
T  11931801 agatgttgttt 11931811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 260
Target Start/End: Original strand, 44644905 - 44644990
Alignment:
Q  175 gcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| |||||||| ||| ||| |||||||||    
T  44644905 gcaatgtgcactattcaattgtcttactttgaccatactttttaactaatatataaatataaatattaacatataagatgttgttt 44644990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 9007047 - 9006939
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||| ||| ||||||||||||||||  | |||| ||||||||| ||||||| |  ||||||||||||||| |||||||||||| |||||||||||||    
T  9007047 atactccatccatttcaaaatacatgtcgcaattttacaatgtgcattattcatgtagcttactttgaccatattttttaactaatttataaatacaaat 9006948  T
Q  239 attagcatg 247  Q
     ||||||||    
T  9006947 gttagcatg 9006939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 259
Target Start/End: Original strand, 16865069 - 16865173
Alignment:
Q  155 aaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatg 254  Q
    ||||||||||||  |||||| |||| | || ||||||| |||||||||||||| |||||||||||||||  ||||||||||||| |||||||||||  ||    
T  16865069 aaaatacatgtcgcatttttacaatatacaatattcatatgacttactttgacgatactttttaactaacatataaatacaaatgttagcatgtaagttg 16865168  T
Q  255 ttgtt 259  Q
    |||||    
T  16865169 ttgtt 16865173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 13125362 - 13125287
Alignment:
Q  185 ctattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||| || ||||||    
T  13125362 ctattcacttgacttactttcaccatattttttaactaatgtataaatacaaatattagcatctaagatattgttt 13125287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 256
Target Start/End: Original strand, 42133751 - 42133868
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||| | ||||||||||||||||  | ||||  |||||||||||||||| |   ||||||||| |||| |||||||||||| |||||||||||||    
T  42133751 atactcccttcatttcaaaatacatgtcgtaattttaaaatgtgcactattcatatagtttactttgatcatattttttaactaatatataaatacaaat 42133850  T
Q  239 attagcatgtaaaatgtt 256  Q
     |||||||| || |||||    
T  42133851 gttagcatgaaagatgtt 42133868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 9172352 - 9172288
Alignment:
Q  196 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||||||||||||| |||||||||||||||||||||||||  ||||||||||| |||||||||    
T  9172352 acttactttgaccatattttttaactaatgtataaatacaaaagttagcatgtaagatgttgttt 9172288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 13598441 - 13598523
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaacta 222  Q
    ||||| ||||||||| |||||| ||||   |||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  13598441 atacttcctccgttttaaaatatatgttgcattttt-caatgtgcactattcatatgacttactttgaccatactttttaacta 13598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 250
Target Start/End: Complemental strand, 43444791 - 43444692
Alignment:
Q  151 tttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 250  Q
    ||||||||||||||||  | |||| ||||||||| ||||||  | | || ||||||||||| |||||||||||| ||||||||||||| |||||||||||    
T  43444791 tttcaaaatacatgtcgcaattttacaatgtgcattattcacataattttctttgaccatattttttaactaatatataaatacaaatgttagcatgtaa 43444692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 24251967 - 24252079
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 246  Q
    ||||||||||||||||| ||  | |||| |||| || | ||||||  | ||||| |||||||||| |||||||||||| ||||||||||||| |||||||    
T  24251967 tccgtttcaaaatacatttcacaattttacaatatgtattattcacataacttattttgaccatattttttaactaatatataaatacaaatgttagcat 24252066  T
Q  247 gtaaaatgttgttt 260  Q
    || |||||||||||    
T  24252067 gt-aaatgttgttt 24252079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 260
Target Start/End: Complemental strand, 22839157 - 22839069
Alignment:
Q  172 tttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||||||||||||||||||  | |||||||||||||||| |||||||||| | |||||||  |||| ||||||| ||| |||||||||    
T  22839157 tttgcaatgtgcactattcacataacttactttgaccatattttttaactagtatataaattaaaatgttagcatataagatgttgttt 22839069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 259
Target Start/End: Complemental strand, 24093788 - 24093679
Alignment:
Q  151 tttcaaaatacatgtccaattttt-gcaatgtgcactattcatttgacttactttgaccatact-ttttaactaatgtataaatacaaatattagcatgt 248  Q
    ||||||||||||||||  |||||| || |||||| |||||| | ||| |||||||||||||||| ||||||||||  ||| ||||||||| |||||||||    
T  24093788 tttcaaaatacatgtcgtattttttgcgatgtgcgctattcgtatgatttactttgaccatacttttttaactaacatat-aatacaaatgttagcatgt 24093690  T
Q  249 aaaatgttgtt 259  Q
    || ||||||||    
T  24093689 aagatgttgtt 24093679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 38292008 - 38292072
Alignment:
Q  196 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||||||||||||| |||||||||| | ||||||||||||| ||| ||||||| |||||||||    
T  38292008 acttactttgaccatattttttaactagtatataaatacaaatgttaacatgtaagatgttgttt 38292072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 13117548 - 13117467
Alignment:
Q  178 atgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtt 259  Q
    ||||||||| || || | |||||||||||||||| ||||||||| || |||||||| ||||||||| || ||| ||||||||    
T  13117548 atgtgcactgtttatataacttactttgaccatattttttaactgatatataaatataaatattagtatctaagatgttgtt 13117467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 255
Target Start/End: Complemental strand, 44563260 - 44563144
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccata-ctttttaactaatgtataaatacaaat 238  Q
    |||||| ||||||| ||| ||||||||  | ||||  ||| |||||||||||| | ||||||||||| ||||  ||||||| |||| |||||||||| ||    
T  44563260 tactccatccgttttaaattacatgtcgcaattttataatatgcactattcatataacttactttgatcatatttttttaattaatatataaatacatat 44563161  T
Q  239 attagcatgtaaaatgt 255  Q
     |||||||||| |||||    
T  44563160 gttagcatgtagaatgt 44563144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 9553926 - 9553864
Alignment:
Q  196 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtt 259  Q
    |||||||||||||  | |||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  9553926 acttactttgaccgcattttttaactaatatataaat-caaatattaacatgtaaaatgttgtt 9553864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 38839136 - 38839191
Alignment:
Q  203 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgt 258  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||| ||| |||||||    
T  38839136 ttgaccatattttttaactaatatataaatacaaatgttagcatataagatgttgt 38839191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 260
Target Start/End: Complemental strand, 19166037 - 19165925
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 246  Q
    ||||||| |||||| |||||   ||||||||||||||| ||||||  ||||||  ||||| |||  ||||||| |||| ||||||||||| | ||| |||    
T  19166037 tccgttttaaaatatatgtcgcgtttttgcaatgtgca-tattcacatgacttgttttgatcatggtttttaattaatatataaatacaattgttatcat 19165939  T
Q  247 gtaaaatgttgttt 260  Q
    |||| |||||||||    
T  19165938 gtaagatgttgttt 19165925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 260
Target Start/End: Complemental strand, 31610876 - 31610795
Alignment:
Q  179 tgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||||||||||  | ||||| ||| |||||  |||||||||||| ||||||||||||| |||| |||||| | |||||||    
T  31610876 tgtgcactattcacataacttatttttaccattttttttaactaatatataaatacaaatgttagaatgtaagacgttgttt 31610795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Complemental strand, 5405259 - 5405229
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||    
T  5405259 atactccctccgtttcaaaatacatgtccaa 5405229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Complemental strand, 7608312 - 7608282
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||    
T  7608312 atactccctccgtttcaaaatacatgtccaa 7608282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Original strand, 19141065 - 19141095
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||    
T  19141065 atactccctccgtttcaaaatacatgtccaa 19141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 31904085 - 31904027
Alignment:
Q  197 cttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgt 255  Q
    |||||| |||||||| |||||||||||| |||||||| |||||||| || |||| ||||    
T  31904085 cttactctgaccatattttttaactaatatataaatataaatattatcacgtaagatgt 31904027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 36177809 - 36177723
Alignment:
Q  171 ttttgcaatgtgcactattcatttgacttactttgaccatacttttt-aactaatgtataaatacaaatattagcatgtaaaatgtt 256  Q
    |||||||||| ||| ||||||  ||| ||| |||||||||| ||||| ||||||| |||||||| |||||||| ||| ||| |||||    
T  36177809 ttttgcaatgcgcattattcacatgatttattttgaccatatttttttaactaatatataaataaaaatattaacatctaagatgtt 36177723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Original strand, 3518907 - 3518936
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  3518907 atactccctccgtttcaaaatacatgtcca 3518936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Original strand, 11841593 - 11841622
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  11841593 tactccctccgtttcaaaatacatgtccaa 11841622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 168
Target Start/End: Complemental strand, 12970017 - 12969988
Alignment:
Q  139 atactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||||||||||||||||||||||    
T  12970017 atactccctccgtttcaaaatacatgtcca 12969988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Complemental strand, 44365419 - 44365390
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  44365419 tactccctccgtttcaaaatacatgtccaa 44365390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Original strand, 1102503 - 1102531
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  1102503 tactccctccgtttcaaaatacatgtcca 1102531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 3837308 - 3837268
Alignment:
Q  213 tttttaactaatgtataaatacaaatattagcatgtaaaat 253  Q
    |||||||||||| |||||||| |||||| ||||||||||||    
T  3837308 tttttaactaatatataaatataaatatcagcatgtaaaat 3837268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 23366785 - 23366817
Alignment:
Q  136 tatatactccctccgtttcaaaatacatgtcca 168  Q
    |||| ||||||||||||||||||||||||||||    
T  23366785 tataaactccctccgtttcaaaatacatgtcca 23366817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 33607637 - 33607605
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||| |||||||||||||||||||||||    
T  33607637 atatactccatccgtttcaaaatacatgtccaa 33607605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 34224431 - 34224403
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  34224431 tactccctccgtttcaaaatacatgtcca 34224403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 7e-55; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 978077 - 978197
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  978077 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 978176  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  978177 ttagcatgtaagatgttgttt 978197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 8086293 - 8086172
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||    
T  8086293 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaat 8086194  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||| ||||||| |||||||||    
T  8086193 attaacatgtaagatgttgttt 8086172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 9502889 - 9502769
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9502889 tactccctccgttttaaaatacatgtttaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaata 9502790  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  9502789 ttagcatgtaagatgttgttt 9502769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 33387219 - 33387340
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||    
T  33387219 atactccctccattttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaat 33387318  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  33387319 attagcatgtaagatgttgttt 33387340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 145 - 260
Target Start/End: Complemental strand, 14634414 - 14634299
Alignment:
Q  145 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagc 244  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  14634414 cctccgtttcaaaatacatgtccaatttttgcaatgtgcactagtcacttgacttactttgactatactttttaactaatatataaatacaaatattagc 14634315  T
Q  245 atgtaaaatgttgttt 260  Q
    |||||| |||||||||    
T  14634314 atgtaagatgttgttt 14634299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 33587732 - 33587611
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  33587732 atactccatctgtttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttgaccatattttttaactaatctataaatacaaat 33587633  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||| ||||||| |||||||||    
T  33587632 attaacatgtaagatgttgttt 33587611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 136 - 260
Target Start/End: Complemental strand, 18094347 - 18094223
Alignment:
Q  136 tatatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaataca 235  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || ||||||||| |  |||||||||||||||||||||||||||    
T  18094347 tatatactccctccgtttcaaaatacatgttcaatttttgcaatgtgcattattcacttaacttactttaattatactttttaactaatgtataaataca 18094248  T
Q  236 aatattagcatgtaaaatgttgttt 260  Q
    ||||||||||||||| |||||||||    
T  18094247 aatattagcatgtaagatgttgttt 18094223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 40156198 - 40156318
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||| |||||| ||||||| |||||||||||||||||||    
T  40156198 tactccctccgtttcaaaatacatatccaacttttgcaatgtgcactattcacttgacttacttttaccataatttttaattaatgtataaatacaaata 40156297  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  40156298 ttagcatgtaagatgttgttt 40156318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 149 - 260
Target Start/End: Complemental strand, 3472530 - 3472419
Alignment:
Q  149 cgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 248  Q
    ||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  3472530 cgtttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatattttttaactaatgaataaatacaaatattagcatgt 3472431  T
Q  249 aaaatgttgttt 260  Q
    || |||||||||    
T  3472430 aagatgttgttt 3472419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 30355136 - 30355016
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| ||||||| ||||||||||| |||||||||||||    
T  30355136 atactccctc-gtttcaaaatacatgtccaatttttgcaatatgcactattcacttgatttactttaaccatacattttaactaatatataaatacaaat 30355038  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  30355037 attagcatgtaagatgttgttt 30355016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 7224165 - 7224285
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    ||||||||  |||| ||||||||||| || ||||||||||||| |||||| | ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  7224165 tactccctatgttttaaaatacatgttcattttttgcaatgtgtactatttaattgacttactttgaccatactttctaactaatttataaatacaaata 7224264  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    |||||||||||||||||||||    
T  7224265 ttagcatgtaaaatgttgttt 7224285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 34111958 - 34112072
Alignment:
Q  136 tatatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaataca 235  Q
    ||||||||| ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| ||| ||||| |||||| ||||||||||    
T  34111958 tatatactctctccgtttcaaaatacatgtctagtttttgcaatgtgcactattcacttgacttactttgactatatttttttactaatctataaataca 34112057  T
Q  236 aatattagcatgtaa 250  Q
    ||||||| |||||||    
T  34112058 aatattatcatgtaa 34112072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 11251126 - 11251223
Alignment:
Q  152 ttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 249  Q
    ||||||||| ||||| || ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11251126 ttcaaaatatatgtctaacttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgta 11251223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 151 - 260
Target Start/End: Complemental strand, 11785977 - 11785867
Alignment:
Q  151 tttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatac-aaatattagcatgta 249  Q
    |||||||||||||||  ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||    
T  11785977 tttcaaaatacatgtttaatttttgcaatgtgtactattcacttgacttactttgatcatactttttaactaatgtataaatacaaaatattaccatgta 11785878  T
Q  250 aaatgttgttt 260  Q
    | |||||||||    
T  11785877 agatgttgttt 11785867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 24992400 - 24992280
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||||||||||||||||||||  | |||| ||||||||||||||||  |  ||||||||||||||| |||||||||||| ||||||||||||||    
T  24992400 tactccctccgtttcaaaatacatgtcatagttttacaatgtgcactattcacatagcttactttgaccatattttttaactaatttataaatacaaata 24992301  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||| ||| |||||||||    
T  24992300 ttagcatataagatgttgttt 24992280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 38916513 - 38916404
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||||||||||||||||  ||||||||| | |||||||||||  |||||| |||||||||||||||||||||||  |||||||||||||    
T  38916513 atactccctccgtttcaaaatacatgtcgcatttttgcagtatgcactattcacatgacttgctttgaccatactttttaactaacatataaatacaaat 38916414  T
Q  239 attagcatgt 248  Q
     |||||||||    
T  38916413 gttagcatgt 38916404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 256
Target Start/End: Original strand, 39776627 - 39776746
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaa 236  Q
    ||||||||||||  ||||||||||||| ||  ||||||||||||| |||||||||  | ||||| ||||||| ||||||||||||||  |||||||||||    
T  39776627 atatactccctcgatttcaaaatacatttcgtatttttgcaatgtacactattcacataacttattttgaccgtactttttaactaacatataaatacaa 39776726  T
Q  237 atattagcatgtaaaatgtt 256  Q
    ||||||||||||||||||||    
T  39776727 atattagcatgtaaaatgtt 39776746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 3263601 - 3263674
Alignment:
Q  21 tctggtgttcatgcttcataaatccatgaagaagagagaagaatacaacataatgaaaactagattataaatac 94  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3263601 tctggtgttcgtgcttcataaatccatgaagaagggagaagaatacaacataatgaaaactagattataaatac 3263674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 12007894 - 12007774
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||||||||||||||||||||  ||||||  | ||||||||||| |  ||||||| ||||||| |||||||||| |||| |||||||||||||     
T  12007894 tactccctccgtttcaaaatacatgtcgcatttttatattgtgcactatttacatgacttaatttgaccctactttttaattaatatataaatacaaatg 12007795  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
     ||||||||||||||||||||    
T  12007794 ctagcatgtaaaatgttgttt 12007774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 9050827 - 9050718
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||| || |||           ||||||||||||||||||||||||||||||    
T  9050827 tactccctccgtttcaaaatacatgttcaatttttgcaacgtgcactattcacttaact-----------tactttttaactaatgtataaatacaaata 9050739  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||||||| |||||||||    
T  9050738 ttagcatgtaagatgttgttt 9050718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 24916510 - 24916388
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatacttttt--aactaatgtataaatacaaa 237  Q
    |||||| ||||||||||||||||||||  | |||| ||||||| ||||||||  |  ||||||||||||||| |||||  ||||||| ||||||||||||    
T  24916510 tactccatccgtttcaaaatacatgtcacaattttacaatgtgtactattcacatagcttactttgaccatattttttttaactaatttataaatacaaa 24916411  T
Q  238 tattagcatgtaaaatgttgttt 260  Q
    ||||||||| ||| |||||||||    
T  24916410 tattagcatataagatgttgttt 24916388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 151 - 260
Target Start/End: Original strand, 27109700 - 27109808
Alignment:
Q  151 tttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 250  Q
    |||||||||| || |  ||||||| |||| || | |||||||||||||||||||||  ||||||||||| ||||||| ||||||||||||||||||||||    
T  27109700 tttcaaaatatatatttaatttttacaatatgtattattcatttgacttactttgat-atactttttaattaatgtaaaaatacaaatattagcatgtaa 27109798  T
Q  251 aatgttgttt 260  Q
     |||||||||    
T  27109799 gatgttgttt 27109808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 20692657 - 20692543
Alignment:
Q  134 aatatatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaata 233  Q
    |||| |||||| ||| |||| |||||||| |||  |||||||||||||||| ||| || ||||| || ||||||||||||||||||| ||  ||||||||    
T  20692657 aataaatactctctctgttttaaaatacacgtcacatttttgcaatgtgcattatccacttgacgtattttgaccatactttttaaccaa--tataaata 20692560  T
Q  234 caaatattagcatgtaa 250  Q
    ||||||||| |||||||    
T  20692559 caaatattaacatgtaa 20692543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 260
Target Start/End: Complemental strand, 12447625 - 12447560
Alignment:
Q  193 ttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||||||||||||||||||||||||||||||| |||||||  |||||||||||||| |||||||||    
T  12447625 ttgacttactttgaccatactttttaactaatgtttaaatac--atattagcatgtaagatgttgttt 12447560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 11761125 - 11761186
Alignment:
Q  199 tactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  11761125 tactttgaccatattttttaactaatatataaatacaaatattaacatgtaagatgttgttt 11761186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 18598539 - 18598620
Alignment:
Q  135 atatatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttt 216  Q
    ||||||||||| || |||||||||||||||||  |||||||||||||||| |||| |  ||| |||||||||||||||||||    
T  18598539 atatatactccatctgtttcaaaatacatgtcgcatttttgcaatgtgcattattgacatgaattactttgaccatactttt 18598620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 257
Target Start/End: Original strand, 32017217 - 32017330
Alignment:
Q  144 ccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattag 243  Q
    |||||||||| |||||||||| |  | ||||   ||||||| ||||||  | ||||||||||| |||| |||||||||||| ||||||||||||| ||||    
T  32017217 ccctccgttttaaaatacatgacgcaattttatgatgtgcaatattcacataacttactttgatcatattttttaactaatatataaatacaaatgttag 32017316  T
Q  244 catgtaaaatgttg 257  Q
    ||||||| ||||||    
T  32017317 catgtaagatgttg 32017330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 27579681 - 27579582
Alignment:
Q  150 gtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 249  Q
    |||||||||||||||||  |||||||  ||||| | |||||| | |||||||||| || ||| |||||||||||| ||||||||||||| ||||||||||    
T  27579681 gtttcaaaatacatgtcacatttttgtgatgtgtattattcaat-gacttactttaactatattttttaactaatatataaatacaaatgttagcatgta 27579583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 32400400 - 32400447
Alignment:
Q  213 tttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||    
T  32400400 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 32400447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 206
Target Start/End: Original strand, 10696790 - 10696856
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttga 206  Q
    |||||| |||||||||||||||| |||    |||||||||||||||||||||| |||||||||||||    
T  10696790 tactccatccgtttcaaaatacacgtcgctattttgcaatgtgcactattcatatgacttactttga 10696856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 12448333 - 12448275
Alignment:
Q  141 actccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgactt 199  Q
    |||||||||||||||||||||||||| |||||||| |||  |||||||||| |||||||    
T  12448333 actccctccgtttcaaaatacatgtctaatttttgtaatacgcactattcacttgactt 12448275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 18998745 - 18998807
Alignment:
Q  198 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||||| |||||| |||||||||||| ||||||||||||| |||| |||||| |||||||||    
T  18998745 ttactttaaccatattttttaactaatatataaatacaaatgttagtatgtaagatgttgttt 18998807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 12456871 - 12456782
Alignment:
Q  171 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||| |||||||||||||| |  | ||||||||| | |||| |||||||||||| || |||||||||| |||| |||||| |||||||||    
T  12456871 ttttacaatgtgcactatttacataacttactttaatcatattttttaactaatatacaaatacaaatgttagtatgtaagatgttgttt 12456782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 36240157 - 36240095
Alignment:
Q  176 caatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||| | | |||| ||||||||||| |||| ||||||| |||||||||||||    
T  36240157 caatgtgcactattcttataactttctttgaccatatttttaaactaatatataaatacaaat 36240095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 260
Target Start/End: Original strand, 6996012 - 6996100
Alignment:
Q  171 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    ||||| |||||||||||||||  | ||||| ||| || ||| |||||||||||| |||||||| |||| ||| |||||||||| ||||||    
T  6996012 ttttgtaatgtgcactattcacataactta-tttaactatattttttaactaatatataaatataaatgttaccatgtaaaatattgttt 6996100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 37495667 - 37495712
Alignment:
Q  197 cttactttgaccatactttttaactaatgtataaatacaaatatta 242  Q
    |||||||||| |||| |||||||||||| |||||||||||||||||    
T  37495667 cttactttgatcatattttttaactaatatataaatacaaatatta 37495712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 3422399 - 3422355
Alignment:
Q  213 tttttaactaatgtataaatacaaatattagcatgtaaaatgttg 257  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||    
T  3422399 tttttaactaatatataaatacaaatgttagcatgtaagatgttg 3422355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 26387084 - 26387021
Alignment:
Q  197 cttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||||||||| |||| |||||||||||  |||||||| |||| ||||||| ||| |||||||||    
T  26387084 cttactttgatcatattttttaactaacatataaatataaatgttagcatttaagatgttgttt 26387021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 31197896 - 31197833
Alignment:
Q  196 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtt 259  Q
    |||||||||||| ||| |||||||||||  ||||||||||||| |||  |||||||||| ||||    
T  31197896 acttactttgacaataatttttaactaaaatataaatacaaatgttaatatgtaaaatgctgtt 31197833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 169
Target Start/End: Original strand, 9502626 - 9502656
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaa 169  Q
    |||||||||||||||||||||||||||||||    
T  9502626 atactccctccgtttcaaaatacatgtccaa 9502656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Complemental strand, 978339 - 978310
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  978339 tactccctccgtttcaaaatacatgtccaa 978310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 141
Target Start/End: Original strand, 3263675 - 3263708
Alignment:
Q  108 aaaaactaaataccagccttaacactaatatata 141  Q
    ||||||||||||||||| ||||||||||||||||    
T  3263675 aaaaactaaataccagctttaacactaatatata 3263708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 7607827 - 7607741
Alignment:
Q  169 atttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtt 259  Q
    |||||| ||||||||| ||||||| | | ||| |||||||||| |||||||    | |||||||||| |||||| ||| ||||||||||||    
T  7607827 atttttacaatgtgcaatattcatataaattagtttgaccatattttttaa----tatataaatacatatattaacatctaaaatgttgtt 7607741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Original strand, 14634157 - 14634186
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  14634157 tactccctccgtttcaaaatacatgtccaa 14634186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Complemental strand, 33387481 - 33387452
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  33387481 tactccctccgtttcaaaatacatgtccaa 33387452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 5947757 - 5947697
Alignment:
Q  196 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgtt 256  Q
    |||||||||||| ||| |||||| ||||  ||||||||||||| | ||||| |||||||||    
T  5947757 acttactttgacaatattttttagctaacatataaatacaaatctaagcatataaaatgtt 5947697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 12807130 - 12807102
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  12807130 tactccctccgtttcaaaatacatgtcca 12807102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 15305265 - 15305237
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  15305265 tactccctccgtttcaaaatacatgtcca 15305237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Original strand, 25773649 - 25773677
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  25773649 tactccctccgtttcaaaatacatgtcca 25773677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 30720769 - 30720741
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  30720769 tactccctccgtttcaaaatacatgtcca 30720741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 143 - 260
Target Start/End: Complemental strand, 68028 - 67911
Alignment:
Q  143 tccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatatta 242  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  68028 tccctacgtttcaaaatacatgtccaatttttgaaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatatta 67929  T
Q  243 gcatgtaaaatgttgttt 260  Q
     ||||||| |||||||||    
T  67928 acatgtaagatgttgttt 67911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 162100 - 161979
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  162100 atactccctccgtttcaaaatacatgtctaatttttgtaatgtgcactattcacttgacttacattgaccatactttttaactaatgtataaatacaaat 162001  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  162000 attagcatgtaagatgttgttt 161979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 137 - 260
Target Start/End: Complemental strand, 100912 - 100789
Alignment:
Q  137 atatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaa 236  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  100912 atatactccctccgtttcaaaatacatgttcaacttttgcaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaa 100813  T
Q  237 atattagcatgtaaaatgttgttt 260  Q
    |||||||| ||||| |||||||||    
T  100812 atattagcgtgtaagatgttgttt 100789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 169
Target Start/End: Original strand, 100647 - 100676
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaa 169  Q
    ||||||||||||||||||||||||||||||    
T  100647 tactccctccgtttcaaaatacatgtccaa 100676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 139 - 260
Target Start/End: Complemental strand, 13980 - 13859
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaat 238  Q
    ||||||||||||||| |||||||||||| ||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  13980 atactccctccgttttaaaatacatgtctaatatttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataaat 13881  T
Q  239 attagcatgtaaaatgttgttt 260  Q
    |||||||||||| |||||||||    
T  13880 attagcatgtaagatgttgttt 13859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 9371 - 9433
Alignment:
Q  139 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttac 201  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  9371 atactccctccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttac 9433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 70961 - 71080
Alignment:
Q  140 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaata 239  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||    
T  70961 tactccctccatttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttattttgaccata-tttttaactaatgtataaatacaaata 71059  T
Q  240 ttagcatgtaaaatgttgttt 260  Q
    ||||||| ||| |||||||||    
T  71060 ttagcatttaagatgttgttt 71080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 28916 - 28798
Alignment:
Q  140 tactccctccgtttcaaaa-tacatgtccaatttttgcaatgtgca-ctattcatttgacttactttgaccatactttttaactaatgtataaatacaaa 237  Q
    ||||||||||||||||||| ||||||||  | |||| ||||||||| |||||||  |  ||||||||||||||| |||||||||||| ||||||||||||    
T  28916 tactccctccgtttcaaaaatacatgtcatagttttacaatgtgcaactattcacatagcttactttgaccatattttttaactaatttataaatacaaa 28817  T
Q  238 tattagcatgtaaaatgtt 256  Q
    ||||||||| ||| |||||    
T  28816 tattagcatataagatgtt 28798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 260
Target Start/End: Complemental strand, 9088 - 8975
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 246  Q
    ||||||||| ||||||| ||  | |||| |||| |||| ||||||  | |||||||||||||| | |||||||||||| ||||||||||||| |||||||    
T  9088 tccgtttcataatacatttcacaattttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatgttagcat 8989  T
Q  247 gtaaaatgttgttt 260  Q
    |||| |||||||||    
T  8988 gtaagatgttgttt 8975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 138261 - 138172
Alignment:
Q  171 ttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||| |||| |||| ||||||  | |||||||||||||| | |||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  138261 ttttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatgttagcatgtaagatgttgttt 138172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 4005 - 4058
Alignment:
Q  197 cttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 250  Q
    ||||||||||||||| |||||||||||| ||||||||||||| |||||||||||    
T  4005 cttactttgaccatattttttaactaatatataaatacaaatgttagcatgtaa 4058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 22787 - 22900
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 246  Q
    ||||||||| ||||||| ||  | |||| |||| |||| ||||||  | ||||| |||||||| | ||||||||| || ||||||||||||| |||||||    
T  22787 tccgtttcataatacatttcacaattttacaatatgcattattcacataacttattttgaccacattttttaactcatatataaatacaaatgttagcat 22886  T
Q  247 gtaaaatgttgttt 260  Q
    |||| |||||||||    
T  22887 gtaagatgttgttt 22900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 1576 - 1639
Alignment:
Q  196 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgtt 259  Q
    ||||||||| | |||| ||||||| |||||||||||||||||||||||||||||| || |||||    
T  1576 acttactttaatcatattttttaattaatgtataaatacaaatattagcatgtaagatattgtt 1639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 260
Target Start/End: Complemental strand, 217131 - 217017
Alignment:
Q  147 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatacttttt-aactaatgtataaatacaaatattagca 245  Q
    |||||||||||||||| |||  | |||| ||||||||| |||||   | |||||  ||||||||| ||||| || |||| ||||||||||||| ||||||    
T  217131 tccgtttcaaaatacaagtcgcaattttacaatgtgcaatattctcataacttatgttgaccatatttttttaagtaatatataaatacaaatgttagca 217032  T
Q  246 tgtaaaatgttgttt 260  Q
    | ||| |||||||||    
T  217031 tataagatgttgttt 217017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 53626 - 53562
Alignment:
Q  196 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaaatgttgttt 260  Q
    |||| |||||| |||| |||||||||||| ||||| ||||||| |||||||| || |||||||||    
T  53626 acttgctttgatcatattttttaactaatatataattacaaattttagcatgcaagatgttgttt 53562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 168
Target Start/End: Complemental strand, 182 - 148
Alignment:
Q  134 aatatatactccctccgtttcaaaatacatgtcca 168  Q
    ||||||||||| |||||||||||||||||||||||    
T  182 aatatatactctctccgtttcaaaatacatgtcca 148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 168
Target Start/End: Original strand, 23467 - 23495
Alignment:
Q  140 tactccctccgtttcaaaatacatgtcca 168  Q
    |||||||||||||||||||||||||||||    
T  23467 tactccctccgtttcaaaatacatgtcca 23495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University