View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7677_high_6 (Length: 380)
Name: NF7677_high_6
Description: NF7677
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7677_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 359; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 1 - 367
Target Start/End: Original strand, 41697689 - 41698055
Alignment:
| Q |
1 |
taccaatccattgctattaaatgcaaatgcagagcttggaagctccccagcatatgtataagcaacaaagaatagcccatttggcaatcttcctttaatt |
100 |
Q |
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| T |
41697689 |
taccaatccattgctattaaatgcaaatgcagagcttggaagctccccagcatatgtataagcaacaaagaatagcccatttggcaatattcctttaatt |
41697788 |
T |
|
| Q |
101 |
aagtagctgcataacataaagaccaaaaaaggaaagaatacttataaagcaattttatttgaattcgagaacaaaatatgaatatgaatacaaacgctta |
200 |
Q |
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| T |
41697789 |
aagtagctgcataacataaagaccaaaaaaggaaagaatacttataaagcaattttatttgaattcgagaacaaaatatgaatatgaatacaaacgctta |
41697888 |
T |
|
| Q |
201 |
cgtgtgaccaacaagaacaacatttgcatcctcattgtgtgctgcaattgccatagattcatcaacaacaagaactgtagaacactcgtttgaggaatca |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
41697889 |
cgtgtgaccaacaagaacaacatttgcatcctcattgtgtgctgcaattgccatagattcatcaacaacaagaactgtagaacactcatttgaggaatca |
41697988 |
T |
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| Q |
301 |
tcttctaaacttttcaatccttctttcggaacaaatgcaagaatttccttcttgaaattaataagta |
367 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41697989 |
tcttctaaacttttcaatccttctttcggaacaaatgcaagaatttccttcttgaaattaataagta |
41698055 |
T |
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