View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7680_low_21 (Length: 349)
Name: NF7680_low_21
Description: NF7680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7680_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 33707665 - 33707955
Alignment:
| Q |
1 |
cgccgaagtaatcttgagtctctgttttgttatgataaagctatcccagaagaaataattgagaagcctgttgggttatctttggctgaaaaagctattg |
100 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33707665 |
cgccgaagtaatcttgaatctctgttttgttatgataaagctatcccagaagaaataattgagaagcctgttgggttatctttggctgaaaaagctattg |
33707764 |
T |
|
| Q |
101 |
gtaacaatacccgatgcaatgactgtcatgccaaaggtgccgtgctttgcgccacttgtgctggttcaggtctatatgttgactccataatggaaagtca |
200 |
Q |
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|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33707765 |
gtaacaataccagatgcaatgactgtcatgccaaaggtgccgtgctttgcgccacttgtgctggttcaggtctatatgttgactccataatggaaagtca |
33707864 |
T |
|
| Q |
201 |
gggcataattgttaaagttcgttgcctaggtatattctctttcctgttcagtctcatgcaccttgcttgtgtttgaacaatacttgcagca |
291 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33707865 |
gggcataattgttaaagttcgttgcctaggtatattctctttcctgttcagtctcatgcaccttgcttgtgtttgaacaatacttgcagca |
33707955 |
T |
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