View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7680_low_35 (Length: 245)
Name: NF7680_low_35
Description: NF7680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7680_low_35 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 9 - 237
Target Start/End: Original strand, 15513717 - 15513945
Alignment:
| Q |
9 |
atggacatcatgtcatgtcgaccaaactttcttccttcctctacatatatcacctctctacacaactttttcataatcagcaaataatctaagtgaaatt |
108 |
Q |
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| T |
15513717 |
atggacctcatgtcatatcgaccaaactttcttccttcctctacatatatcacctctctacacaactttttaataatcagcaaataatccaagtgaaatt |
15513816 |
T |
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| Q |
109 |
actacgtatattctctctatctcaagcaagctccatggccaataattaccccattgatcagatcaacgccttatataagatggggaagataaactccctc |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15513817 |
actacgtatattctctctatctcaagcaagctccatggccaataattaccccattgatcagatcaacgccttatataagatggggaagataaactccctc |
15513916 |
T |
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| Q |
209 |
tttggattggcaacatgtcttttattgat |
237 |
Q |
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||||||||||||||||||||||| ||||| |
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| T |
15513917 |
tttggattggcaacatgtcttttcttgat |
15513945 |
T |
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