View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7681_low_1 (Length: 861)

Name: NF7681_low_1
Description: NF7681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7681_low_1
NF7681_low_1
[»] chr5 (33 HSPs)
chr5 (113-846)||(42562342-42563074)
chr5 (1-108)||(30463900-30464007)
chr5 (1-108)||(12738718-12738825)
chr5 (1-108)||(12801541-12801648)
chr5 (1-109)||(34328809-34328917)
chr5 (1-108)||(8541253-8541360)
chr5 (1-109)||(2852885-2852993)
chr5 (1-109)||(21842974-21843082)
chr5 (1-105)||(28822072-28822176)
chr5 (1-108)||(28813747-28813856)
chr5 (19-108)||(17574318-17574407)
chr5 (19-108)||(7267843-7267932)
chr5 (1-108)||(29620138-29620245)
chr5 (1-108)||(32134231-32134338)
chr5 (19-109)||(2179786-2179876)
chr5 (19-108)||(8539675-8539764)
chr5 (19-108)||(36057648-36057737)
chr5 (1-108)||(7269428-7269535)
chr5 (1-108)||(40782193-40782300)
chr5 (19-109)||(34327634-34327724)
chr5 (19-108)||(30468315-30468404)
chr5 (391-460)||(29712864-29712933)
chr5 (1-105)||(41493847-41493951)
chr5 (1-106)||(17577917-17578022)
chr5 (19-108)||(24541247-24541336)
chr5 (41-109)||(2854383-2854451)
chr5 (641-710)||(29712613-29712682)
chr5 (410-476)||(178652-178718)
chr5 (410-460)||(29695785-29695835)
chr5 (1-52)||(27077449-27077500)
chr5 (19-109)||(29621816-29621906)
chr5 (19-105)||(40780553-40780639)
chr5 (19-96)||(43492133-43492210)
[»] chr7 (40 HSPs)
chr7 (1-105)||(48227923-48228027)
chr7 (1-105)||(39857648-39857752)
chr7 (1-108)||(23904583-23904690)
chr7 (1-107)||(24226582-24226688)
chr7 (1-109)||(37113940-37114048)
chr7 (1-108)||(13169665-13169772)
chr7 (1-104)||(35691431-35691534)
chr7 (1-109)||(46437106-46437214)
chr7 (1-108)||(22155829-22155936)
chr7 (1-108)||(22211744-22211851)
chr7 (1-108)||(35403601-35403708)
chr7 (1-109)||(47384293-47384401)
chr7 (1-105)||(6605379-6605483)
chr7 (19-108)||(45359336-45359425)
chr7 (19-108)||(47386244-47386333)
chr7 (1-109)||(34774997-34775105)
chr7 (1-109)||(35401968-35402076)
chr7 (1-108)||(77996-78103)
chr7 (19-109)||(39859264-39859354)
chr7 (19-108)||(30940460-30940549)
chr7 (1-108)||(20479701-20479808)
chr7 (1-108)||(38549547-38549654)
chr7 (19-105)||(24228444-24228530)
chr7 (19-108)||(38474178-38474267)
chr7 (1-93)||(13039624-13039716)
chr7 (1-105)||(27664433-27664537)
chr7 (19-109)||(37115561-37115651)
chr7 (19-108)||(27666100-27666189)
chr7 (37-108)||(29996567-29996638)
chr7 (1-108)||(45361258-45361365)
chr7 (32-86)||(13168142-13168196)
chr7 (19-105)||(37796216-37796302)
chr7 (19-108)||(56330-56419)
chr7 (32-109)||(46439546-46439623)
chr7 (1-89)||(48311715-48311803)
chr7 (19-105)||(34776950-34777036)
chr7 (59-108)||(23906307-23906356)
chr7 (18-110)||(13018031-13018125)
chr7 (59-107)||(29994907-29994955)
chr7 (19-108)||(20478042-20478131)
[»] chr3 (54 HSPs)
chr3 (1-109)||(23291569-23291677)
chr3 (1-108)||(30598337-30598444)
chr3 (1-109)||(3150251-3150359)
chr3 (1-108)||(44267981-44268088)
chr3 (1-108)||(54900056-54900163)
chr3 (1-107)||(2378965-2379071)
chr3 (19-108)||(27899136-27899225)
chr3 (19-108)||(54898437-54898526)
chr3 (1-109)||(611204-611312)
chr3 (1-109)||(38193492-38193600)
chr3 (1-105)||(54412529-54412633)
chr3 (1-108)||(46308807-46308914)
chr3 (2-109)||(46310419-46310526)
chr3 (1-108)||(53094255-53094362)
chr3 (1-108)||(53187742-53187849)
chr3 (19-109)||(53190814-53190904)
chr3 (19-108)||(2226207-2226296)
chr3 (19-108)||(21348723-21348812)
chr3 (1-96)||(17516955-17517050)
chr3 (1-108)||(41979334-41979441)
chr3 (10-105)||(42282464-42282559)
chr3 (1-108)||(46114087-46114195)
chr3 (1-108)||(38191895-38192002)
chr3 (1-108)||(46611285-46611392)
chr3 (19-109)||(46112486-46112576)
chr3 (1-109)||(21350587-21350695)
chr3 (19-95)||(35905767-35905843)
chr3 (19-106)||(43765139-43765226)
chr3 (1-108)||(46609149-46609256)
chr3 (1-103)||(2661890-2661992)
chr3 (1-108)||(27897151-27897257)
chr3 (1-108)||(28626411-28626518)
chr3 (1-108)||(35903825-35903932)
chr3 (19-109)||(17515309-17515399)
chr3 (19-108)||(23293225-23293314)
chr3 (19-108)||(30599973-30600062)
chr3 (19-108)||(41977750-41977839)
chr3 (1-108)||(44795872-44795979)
chr3 (1-108)||(51686376-51686483)
chr3 (1-108)||(53092623-53092730)
chr3 (1-108)||(7883328-7883435)
chr3 (1-108)||(48829356-48829463)
chr3 (62-108)||(7884942-7884988)
chr3 (1-54)||(43767029-43767082)
chr3 (19-108)||(51684610-51684699)
chr3 (19-105)||(42279510-42279596)
chr3 (37-102)||(2660218-2660283)
chr3 (690-735)||(11015641-11015686)
chr3 (19-108)||(44794208-44794296)
chr3 (32-108)||(600725-600801)
chr3 (19-78)||(46197750-46197809)
chr3 (19-105)||(2377032-2377118)
chr3 (71-105)||(35572576-35572610)
chr3 (19-108)||(3152273-3152362)
[»] chr8 (46 HSPs)
chr8 (1-108)||(42943408-42943515)
chr8 (1-109)||(22273873-22273981)
chr8 (1-108)||(5038044-5038150)
chr8 (1-108)||(35510801-35510908)
chr8 (1-108)||(29237151-29237258)
chr8 (1-108)||(35509214-35509321)
chr8 (19-109)||(13282477-13282567)
chr8 (1-109)||(601686-601794)
chr8 (1-108)||(8608237-8608345)
chr8 (1-108)||(26238726-26238833)
chr8 (1-108)||(33762695-33762802)
chr8 (1-107)||(33707207-33707313)
chr8 (19-108)||(8609842-8609931)
chr8 (1-105)||(9671980-9672084)
chr8 (1-109)||(13484544-13484652)
chr8 (1-109)||(41823889-41823997)
chr8 (1-108)||(13106804-13106911)
chr8 (1-108)||(27692819-27692926)
chr8 (1-108)||(33761069-33761176)
chr8 (1-108)||(38548813-38548920)
chr8 (1-109)||(29239169-29239277)
chr8 (32-108)||(34681079-34681155)
chr8 (1-108)||(41040720-41040827)
chr8 (1-108)||(43262119-43262226)
chr8 (19-108)||(13486154-13486243)
chr8 (19-108)||(41042639-41042728)
chr8 (19-107)||(5036446-5036534)
chr8 (1-105)||(13283977-13284081)
chr8 (1-108)||(15308243-15308350)
chr8 (1-108)||(15488612-15488719)
chr8 (19-105)||(41825699-41825785)
chr8 (19-105)||(42941777-42941863)
chr8 (19-108)||(27691154-27691243)
chr8 (19-108)||(38547228-38547317)
chr8 (19-108)||(22272334-22272425)
chr8 (19-109)||(7745167-7745257)
chr8 (19-105)||(26242369-26242455)
chr8 (19-108)||(13108391-13108480)
chr8 (395-458)||(15348480-15348543)
chr8 (38-108)||(33708878-33708947)
chr8 (1-98)||(3151967-3152064)
chr8 (1-93)||(15562439-15562530)
chr8 (1-105)||(27404213-27404317)
chr8 (49-108)||(600760-600819)
chr8 (759-813)||(4031936-4031990)
chr8 (695-745)||(4032022-4032072)
[»] chr2 (31 HSPs)
chr2 (1-105)||(19906685-19906789)
chr2 (1-108)||(39663154-39663261)
chr2 (1-108)||(16376736-16376843)
chr2 (19-108)||(16763076-16763165)
chr2 (1-109)||(14387348-14387456)
chr2 (1-108)||(34400314-34400421)
chr2 (2-108)||(14389122-14389228)
chr2 (2-108)||(16764594-16764700)
chr2 (19-108)||(2766934-2767023)
chr2 (1-108)||(39456762-39456869)
chr2 (1-108)||(40561860-40561967)
chr2 (19-108)||(39664803-39664892)
chr2 (19-108)||(44709800-44709889)
chr2 (1-108)||(6783364-6783471)
chr2 (1-108)||(24205598-24205705)
chr2 (19-108)||(40560223-40560312)
chr2 (1-109)||(19581413-19581521)
chr2 (19-109)||(19908301-19908392)
chr2 (1-108)||(37022167-37022274)
chr2 (12-105)||(6799401-6799494)
chr2 (1-108)||(2577462-2577569)
chr2 (2-105)||(17696209-17696312)
chr2 (1-108)||(42517558-42517664)
chr2 (19-104)||(42519260-42519346)
chr2 (1-93)||(37646460-37646552)
chr2 (19-108)||(6797507-6797596)
chr2 (19-108)||(39455169-39455258)
chr2 (1-50)||(17698091-17698140)
chr2 (1-105)||(31475061-31475166)
chr2 (19-108)||(37020508-37020597)
chr2 (19-114)||(37645481-37645576)
[»] chr4 (75 HSPs)
chr4 (1-108)||(49524715-49524822)
chr4 (1-108)||(35401749-35401856)
chr4 (1-108)||(20493827-20493934)
chr4 (1-96)||(39345576-39345671)
chr4 (355-481)||(48862819-48862945)
chr4 (2-109)||(4169685-4169792)
chr4 (1-108)||(43507167-43507274)
chr4 (1-108)||(43508635-43508742)
chr4 (2-108)||(319273-319379)
chr4 (19-109)||(51011925-51012015)
chr4 (1-109)||(48645254-48645362)
chr4 (1-104)||(11254123-11254226)
chr4 (1-108)||(33264382-33264489)
chr4 (1-108)||(42982434-42982541)
chr4 (1-108)||(51013868-51013975)
chr4 (3-108)||(4173724-4173829)
chr4 (648-809)||(48898585-48898746)
chr4 (18-89)||(52868183-52868254)
chr4 (1-103)||(43521091-43521193)
chr4 (3-108)||(320884-320989)
chr4 (19-107)||(49523125-49523213)
chr4 (621-742)||(48870381-48870502)
chr4 (621-742)||(48886067-48886188)
chr4 (1-108)||(33265992-33266099)
chr4 (19-105)||(41761781-41761867)
chr4 (363-481)||(45366595-45366713)
chr4 (340-481)||(48735689-48735833)
chr4 (640-742)||(48875704-48875806)
chr4 (19-108)||(41781539-41781628)
chr4 (19-108)||(43519424-43519513)
chr4 (641-749)||(48891271-48891379)
chr4 (1-108)||(833223-833330)
chr4 (1-108)||(5439629-5439736)
chr4 (353-464)||(33133613-33133724)
chr4 (1-107)||(20819986-20820092)
chr4 (759-813)||(45384903-45384957)
chr4 (640-749)||(50250898-50251007)
chr4 (401-457)||(48870166-48870222)
chr4 (401-457)||(48885852-48885908)
chr4 (1-108)||(5437811-5437918)
chr4 (620-743)||(45372183-45372306)
chr4 (648-747)||(48170690-48170789)
chr4 (692-811)||(49041201-49041320)
chr4 (363-481)||(33134200-33134318)
chr4 (410-464)||(48148076-48148130)
chr4 (695-749)||(48852576-48852630)
chr4 (19-108)||(35404480-35404569)
chr4 (690-811)||(48863137-48863258)
chr4 (1-109)||(54387864-54387971)
chr4 (363-458)||(7877306-7877401)
chr4 (363-458)||(45372454-45372549)
chr4 (762-813)||(50250816-50250867)
chr4 (1-87)||(2691394-2691480)
chr4 (401-458)||(7771028-7771085)
chr4 (19-108)||(48813787-48813876)
chr4 (410-451)||(48891042-48891083)
chr4 (410-458)||(7904665-7904713)
chr4 (417-481)||(48170963-48171027)
chr4 (761-809)||(48870536-48870584)
chr4 (761-809)||(48886222-48886270)
chr4 (359-451)||(48902532-48902624)
chr4 (410-458)||(49041535-49041583)
chr4 (1-108)||(835024-835131)
chr4 (354-449)||(7789666-7789761)
chr4 (414-457)||(48875483-48875526)
chr4 (395-457)||(48156825-48156887)
chr4 (762-824)||(48170586-48170648)
chr4 (19-89)||(48646782-48646852)
chr4 (343-460)||(49048994-49049109)
chr4 (32-105)||(7149542-7149615)
chr4 (640-673)||(7771265-7771298)
chr4 (640-673)||(7774010-7774043)
chr4 (401-458)||(7774226-7774283)
chr4 (640-673)||(7789950-7789983)
chr4 (640-673)||(7904894-7904927)
[»] chr1 (46 HSPs)
chr1 (1-105)||(3011858-3011962)
chr1 (1-108)||(31236819-31236926)
chr1 (1-109)||(2871058-2871166)
chr1 (1-108)||(26223587-26223694)
chr1 (1-109)||(8167941-8168049)
chr1 (1-105)||(51894570-51894674)
chr1 (1-108)||(25276742-25276849)
chr1 (1-96)||(33599230-33599325)
chr1 (1-108)||(37088118-37088225)
chr1 (19-109)||(2869578-2869668)
chr1 (1-107)||(50554164-50554270)
chr1 (19-108)||(37344342-37344431)
chr1 (1-109)||(46582009-46582117)
chr1 (19-108)||(3013511-3013600)
chr1 (19-108)||(25278403-25278492)
chr1 (19-108)||(27087283-27087372)
chr1 (1-108)||(8169550-8169657)
chr1 (1-108)||(9120039-9120146)
chr1 (1-108)||(27089261-27089368)
chr1 (1-108)||(37345944-37346051)
chr1 (19-109)||(50556132-50556222)
chr1 (19-108)||(31238530-31238619)
chr1 (4-108)||(34776569-34776673)
chr1 (1-108)||(4854410-4854517)
chr1 (19-109)||(34778173-34778263)
chr1 (19-108)||(4856001-4856090)
chr1 (1-109)||(52641887-52641995)
chr1 (40-107)||(6816866-6816933)
chr1 (19-108)||(6818713-6818802)
chr1 (19-108)||(25278988-25279077)
chr1 (19-108)||(46583591-46583680)
chr1 (3-108)||(47011456-47011561)
chr1 (19-108)||(51896187-51896276)
chr1 (32-108)||(25278854-25278930)
chr1 (390-457)||(24322075-24322142)
chr1 (46-109)||(33599186-33599249)
chr1 (19-105)||(33602679-33602765)
chr1 (19-105)||(52643650-52643736)
chr1 (1-109)||(1444163-1444271)
chr1 (59-108)||(45044949-45044998)
chr1 (410-458)||(24309810-24309858)
chr1 (19-109)||(47013117-47013207)
chr1 (410-451)||(24415470-24415511)
chr1 (3-52)||(51123541-51123590)
chr1 (1-109)||(23577635-23577743)
chr1 (19-109)||(9121703-9121793)
[»] chr6 (28 HSPs)
chr6 (1-108)||(9400017-9400124)
chr6 (1-109)||(10569901-10570009)
chr6 (1-109)||(11357176-11357284)
chr6 (1-109)||(18645086-18645193)
chr6 (1-109)||(32518479-32518587)
chr6 (1-108)||(20525316-20525423)
chr6 (19-108)||(13613617-13613706)
chr6 (19-108)||(32439126-32439215)
chr6 (1-108)||(7371175-7371282)
chr6 (1-108)||(13610690-13610796)
chr6 (1-108)||(32454248-32454355)
chr6 (1-109)||(6902880-6902987)
chr6 (32-108)||(7051258-7051334)
chr6 (19-107)||(20523367-20523455)
chr6 (33-107)||(11355223-11355297)
chr6 (1-93)||(33276816-33276905)
chr6 (1-105)||(21068628-21068732)
chr6 (32-108)||(32516877-32516953)
chr6 (1-108)||(3480639-3480746)
chr6 (19-108)||(6899485-6899574)
chr6 (19-96)||(10568411-10568488)
chr6 (19-105)||(7372993-7373079)
chr6 (634-743)||(21015658-21015767)
chr6 (19-108)||(32455926-32456015)
chr6 (1-52)||(21045366-21045417)
chr6 (59-109)||(8605365-8605415)
chr6 (40-108)||(32437140-32437208)
chr6 (1-52)||(33267117-33267168)
[»] scaffold0345 (1 HSPs)
scaffold0345 (1-109)||(1537-1645)
[»] scaffold0058 (3 HSPs)
scaffold0058 (1-108)||(14325-14432)
scaffold0058 (19-108)||(3294-3383)
scaffold0058 (19-108)||(4466-4555)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-108)||(54240-54347)
[»] scaffold0564 (1 HSPs)
scaffold0564 (19-106)||(8264-8351)
[»] scaffold1454 (1 HSPs)
scaffold1454 (19-105)||(1266-1352)
[»] scaffold1712 (1 HSPs)
scaffold1712 (1-108)||(982-1089)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-54)||(106722-106775)
[»] scaffold0002 (1 HSPs)
scaffold0002 (30-101)||(436272-436343)


Alignment Details
Target: chr5 (Bit Score: 646; Significance: 0; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 646; E-Value: 0
Query Start/End: Original strand, 113 - 846
Target Start/End: Complemental strand, 42563074 - 42562342
Alignment:
Q  113 attattactatgaataaaacaccttaagtttgcttgcctacgaccacagtgctaaattgcacctcagctatatgataatacatttcaaaatatattatag 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  42563074 attattactatgaataaaagaccttaagtttgcttgcctacgaccactgtgctaaattgcccctcagctatgtgataatacatttcaaaatatattatag 42562975  T
Q  213 caaggggtgtgaaaa-tgatgtttggtggatgtagttagcaagccaaaaactacaaataaagggctaaatggtagaaccgtctcacgcgtttctcaacac 311  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42562974 caaggggtgtgaaaaatgatgtttggtggatgtagttagcaagccaaaaactacaaataaagggctaaatggtagaaccgtctcacgtgtttctcaacac 42562875  T
Q  312 caagcggaacaaacaactgtacgcatggagaagaagaatccattgtttctacctcatgatttgatcatccaaatactgctaatgttactggtgaattttc 411  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||    
T  42562874 caagcggaacaaacaactgtacgcatgaagaagaagaatccattgtttctacctcatgatttgatcatccaaatacggctaatgttaccggtgaattctc 42562775  T
Q  412 ttattcgtttcaaatgcgtttgtaagttttggttttctctaatctctcatgataccgagtttgcaaattctaacttggaactcacctctacaacacatac 511  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42562774 ttattcgtttcaaatgcgtttgtaagtcttggttttctctaatctctcataataccgagtttgcaaattctaacttggaactcacctctacaacacatac 42562675  T
Q  512 tcgtagaattatgctcatattaactccacctcctaaaactcaatttgtagatatagaactaccactttacgcttctgcttcaatgaacaataannnnnnn 611  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||           
T  42562674 tcgtagaattatgctcatattaactccacctcctaaaactcaatctgtagatatagaactaccactttacgcttctgcttcaatgaacaataa--ttttt 42562577  T
Q  612 ngtgtccacaatcttatttcgatattggaattaaaggttcgtgtagagggtttatacttttgcattctggtgcatgcttctacctatggaatccatccat 711  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42562576 tgtgtccacaatcttatttcgatattggaattaaaggttcgtgtagagggtttatacttttgcattgtggtgcatgcttctacctatggaatccatccat 42562477  T
Q  712 cggacatcacaaacaaatacctttgtctcctattgattatatttttaatttatatggttttgggtatgatcactcaacaaatgattatttagtggtttca 811  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42562476 cggacatcacaaacaaatacctttgtctcctattgattatatttttaatttatatggttttgggtatgatcactcaacaaatgattatttagtggtttca 42562377  T
Q  812 atttcccgtgatcaaattccatactcagatgatgt 846  Q
    |||||||||||||||||||||||||||||||||||    
T  42562376 atttcccgtgatcaaattccatactcagatgatgt 42562342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 30464007 - 30463900
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||| ||||||||||||||| ||| |||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||| |||    
T  30464007 atttgattgatattttgtaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgagg 30463908  T
Q  101 tattagtc 108  Q
    ||||||||    
T  30463907 tattagtc 30463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 12738718 - 12738825
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    |||||||| ||||||||||||||||||||||||||||| |||    
T  12738718 atttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgagg 12738817  T
Q  101 tattagtc 108  Q
    ||||||||    
T  12738818 tattagtc 12738825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 12801541 - 12801648
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    |||||||| ||||||||||||||||||||||||||||| |||    
T  12801541 atttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgagg 12801640  T
Q  101 tattagtc 108  Q
    ||||||||    
T  12801641 tattagtc 12801648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 34328809 - 34328917
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  |||||||||| ||||| ||||||||||  | |||||||||||||||||| ||||||||||||||||||| |||    
T  34328809 atttgattgacattttgtaaattcaaggacaaaatagctattttgcaaaattcatggacgaatttgaccgatttttgaaaattcaaggacgaatttgagg 34328908  T
Q  101 tattagtct 109  Q
    |||||||||    
T  34328909 tattagtct 34328917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 8541253 - 8541360
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  ||| |||||||||||||||||||||||  | |||||||| ||||||||||||||||||| ||||||||| |||    
T  8541253 atttgattgacattttgtaaattcaaggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaatgacgaatttgagg 8541352  T
Q  101 tattagtc 108  Q
    ||||||||    
T  8541353 tattagtc 8541360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 2852993 - 2852885
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||||||||||||||||||||||  || || | ||||||||||||||||||  | |||| ||||||||||||||||||||||||||||||||| |||    
T  2852993 atttgattgacattttgtaaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgagg 2852894  T
Q  101 tattagtct 109  Q
    |||||||||    
T  2852893 tattagtct 2852885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 21842974 - 21843082
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | | || ||||||||||||| ||||||||||||||||||| |||    
T  21842974 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcatggacaaaattgaccgatttttcaaaattcaaggacgaatttgagg 21843073  T
Q  101 tattagtct 109  Q
    |||||||||    
T  21843074 tattagtct 21843082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 28822072 - 28822176
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  ||||||||||  |||||||||||||||  | ||||||||||| |||||| ||||||||||||||||||| |||    
T  28822072 atttgattgacattttgtaaattcaaggacaaaatagcaatttcgcaaaattcagggacgaatttgacctatttttaaaaattcaaggacgaatttgagg 28822171  T
Q  101 tatta 105  Q
    |||||    
T  28822172 tatta 28822176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 28813747 - 28813856
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccga--ttttttaaaattcaaggacgaatttaa 98  Q
    |||||||| ||||||||||||||||| ||| |||||||||||||||||||||||| | |||||||| || |  |||||| |||||||||||||||||| |    
T  28813747 atttgatttacattttgtaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccaatttttttttaaattcaaggacgaatttga 28813846  T
Q  99 ggtattagtc 108  Q
    ||||||||||    
T  28813847 ggtattagtc 28813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 17574407 - 17574318
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  17574407 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 17574318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 7267932 - 7267843
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||||||||||||  | ||||||||  |||||||||||||||||||||||||||| |||||||||||    
T  7267932 aaattcagggactaaatagatatttcgcaaaattcagtgacgaatttggacgattttttaaaattcaaggacgaatttgaggtattagtc 7267843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 29620245 - 29620138
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||||||| || | ||||||||| ||||||||  | |||| ||| ||||||||| ||||||||||||| | ||| |||    
T  29620245 atttgattgacattttgtaaattcagagactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgagg 29620146  T
Q  101 tattagtc 108  Q
    ||||||||    
T  29620145 tattagtc 29620138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 32134338 - 32134231
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||  |||||||||||| ||||||||   ||||||| ||||||||| ||| ||||| |||    
T  32134338 atttgattgacattttataaattcagggactaaatagatattttacaaaattcaaagacgaatttggttgatttttgaaaattcaatgacaaatttgagg 32134239  T
Q  101 tattagtc 108  Q
    ||||||||    
T  32134238 tattagtc 32134231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 2179876 - 2179786
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    |||||||| ||  ||||||||||||| |||||||||  | |||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  2179876 aaattcagggattaaatagatatttcacaaaattcagggacgaatttgaccgattttttaaaattcaaggacaaatttgaggtattagtct 2179786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 8539764 - 8539675
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| ||||||||||||||||||||||||   |||||||||  ||||||| ||||||||||||||||||| |||||||||||    
T  8539764 aaattcagggactaaatagatatttcgcaaaattcaagaacgaatttgattgatttttcaaaattcaaggacgaatttgaggtattagtc 8539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 36057648 - 36057737
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| | | |||||||||||||||||||||||  | |||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  36057648 aaattcagggtctaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 36057737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 7269428 - 7269535
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||| ||||||| ||||||||| ||| || | ||||||||||||||||||  | |||| ||  ||||||||||||||||||| ||||||||| |||    
T  7269428 atttgattaacattttataaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgattttttaaaattcaaagacgaatttgagg 7269527  T
Q  101 tattagtc 108  Q
    ||||||||    
T  7269528 tattagtc 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 40782193 - 40782300
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||| ||||||||  | |||| ||| ||||||||| ||||||||||||| | ||| |||    
T  40782193 atttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgagg 40782292  T
Q  101 tattagtc 108  Q
    ||||||||    
T  40782293 tattagtc 40782300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 34327724 - 34327634
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    |||||||| ||| |||||||||||||||||||||||  | |||||||| || |||||  ||||||||||||||||||| ||||||||||||    
T  34327724 aaattcagggactaaatagatatttcgcaaaattcagcgacgaatttggccaattttagaaaattcaaggacgaatttgaggtattagtct 34327634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 30468315 - 30468404
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||  ||| ||||||||||||||||||||| | || ||||||||||| ||||||||||||||||||||||| || |||||| ||||    
T  30468315 aaattcaaggactaaatagatatttcgcaaaattgagagacgaatttgaccaattttttaaaattcaaggacgaaattgaggtatcagtc 30468404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 391 - 460
Target Start/End: Complemental strand, 29712933 - 29712864
Alignment:
Q  391 taatgttactggtgaattttcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctctca 460  Q
    ||||||||| |||||| | ||||||||||||||| |||||||||||||| ||||||||||| ||||||||    
T  29712933 taatgttaccggtgaagtctcttattcgtttcaagtgcgtttgtaagttatggttttctcttatctctca 29712864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 41493951 - 41493847
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||||||||||||| | |||||  ||| ||||||||||||| |||||||  | | |||||||| | ||||||| |||||||||||||||| || |||    
T  41493951 atttgattgacattttgaatattcatggactaaatagatatttcacaaaatttgaggacgaatttggctgatttttgaaaattcaaggacgaagttgagg 41493852  T
Q  101 tatta 105  Q
    |||||    
T  41493851 tatta 41493847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 17577917 - 17578022
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||   || || | ||||||| ||||||||||  |  ||| | | ||||||||| ||||||||||||||||||| |||    
T  17577917 atttgattgacattttgtaaattcatgaactaatttgatattttgcaaaattcagggaagaaatgggccgatttttcaaaattcaaggacgaatttgagg 17578016  T
Q  101 tattag 106  Q
    ||||||    
T  17578017 tattag 17578022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 24541247 - 24541336
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | ||||||||||||||||||  | |||| ||| ||||||||| ||||||||| ||||||||| |||||||||||    
T  24541247 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacgaatttgaggtattagtc 24541336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 2854383 - 2854451
Alignment:
Q  41 tttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    ||||| ||||||||  | |||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  2854383 tttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtct 2854451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 641 - 710
Target Start/End: Complemental strand, 29712682 - 29712613
Alignment:
Q  641 attaaaggttcgtgtagagggtttatacttttgcattctggtgcatgcttctacctatggaatccatcca 710  Q
    |||||||||||||||||||||||||||||||||  || |||| ||||  |||  ||||||||||||||||    
T  29712682 attaaaggttcgtgtagagggtttatacttttgagttgtggttcatgtctctgtctatggaatccatcca 29712613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 410 - 476
Target Start/End: Original strand, 178652 - 178718
Alignment:
Q  410 tcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctctcatgataccgagtttgca 476  Q
    |||||||||||||||||| |||||||||| |||||| ||||| |||||  |||||||| | ||||||    
T  178652 tcttattcgtttcaaatgtgtttgtaagtcttggttatctctcatctccaatgatacccattttgca 178718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 410 - 460
Target Start/End: Original strand, 29695785 - 29695835
Alignment:
Q  410 tcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctctca 460  Q
    |||||||||||||||||||||||||||||| ||||| ||||| || |||||    
T  29695785 tcttattcgtttcaaatgcgtttgtaagttatggttatctcttatatctca 29695835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27077449 - 27077500
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaatt 52  Q
    ||||||||||||||| |||||||||| || ||||||||||||| | ||||||    
T  27077449 atttgattgacatttggtaaattcagggataaaatagatattttgaaaaatt 27077500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 29621816 - 29621906
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    |||||||| ||| || | ||||||||| ||||||||  | |||| ||| ||||||||| ||||||||| ||| | ||| ||||||||||||    
T  29621816 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaatgactattttgaggtattagtct 29621906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 40780639 - 40780553
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 105  Q
    |||||||| ||| || | ||||||||| ||||||||  | |||| ||| ||||||||| ||||||||||||| | ||| ||||||||    
T  40780639 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatttttcaaaattcaaggactattttgaggtatta 40780553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 43492133 - 43492210
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaattt 96  Q
    |||||||| ||| |||||||||||||||||||||||  |  ||| ||| | ||||||| |||||| ||| ||||||||    
T  43492133 aaattcagggactaaatagatatttcgcaaaattcagggatgaacttggctgatttttgaaaatttaagtacgaattt 43492210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 2e-42; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 48227923 - 48228027
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||    
T  48227923 atttgattgacattttgtaaattcagggacaaaatagatatttcgcaaaattcaaagacgaatttgaccgattttttaaaattcaaagacgaatttgagg 48228022  T
Q  101 tatta 105  Q
    |||||    
T  48228023 tatta 48228027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 39857752 - 39857648
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||| | ||| |||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||| |||    
T  39857752 atttgattgacattttgtaaattctgggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgagg 39857653  T
Q  101 tatta 105  Q
    |||||    
T  39857652 tatta 39857648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 23904690 - 23904583
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  ||| |||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| |||    
T  23904690 atttgattgacattttgtaaattcatggactaaatagctattttgcaaaattcagagacgaatttgaccgattttttaaaattcaaggacgaatttgagg 23904591  T
Q  101 tattagtc 108  Q
    ||||||||    
T  23904590 tattagtc 23904583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 24226688 - 24226582
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||||| | |||||||| ||||||||| ||||||||||||||||||| |||    
T  24226688 atttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcaaggacgaatttggccgatttttgaaaattcaaggacgaatttgagg 24226589  T
Q  101 tattagt 107  Q
    |||||||    
T  24226588 tattagt 24226582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 37114048 - 37113940
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||  |  |||||||||| |||||||||||||||||||||||||| |||    
T  37114048 atttgattgacattttgtaaatttagggactaaatagatatttcgcaaaattcagggatgaatttgaccaattttttaaaattcaaggacgaatttgagg 37113949  T
Q  101 tattagtct 109  Q
    |||||||||    
T  37113948 tattagtct 37113940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 13169665 - 13169772
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||  | | |||||| ||||||||| ||||||||||||||||||| |||    
T  13169665 atttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttttgaaaattcaaggacgaatttgagg 13169764  T
Q  101 tattagtc 108  Q
    ||||||||    
T  13169765 tattagtc 13169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 35691534 - 35691431
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  |||||||||| |||||||||||||| | || |||||||||||||||||| ||||||||||||||||||| |||    
T  35691534 atttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaatttagagacgaatttgaccgatttttgaaaattcaaggacgaatttgagg 35691435  T
Q  101 tatt 104  Q
    ||||    
T  35691434 tatt 35691431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 46437214 - 46437106
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||| |||||||||||||||||||  |||||||||| ||||||||||||||||| | |||||||| | ||||||| ||||||||||||||||||| |||    
T  46437214 atttggttgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcaacgacgaatttggctgatttttgaaaattcaaggacgaatttgagg 46437115  T
Q  101 tattagtct 109  Q
    |||||||||    
T  46437114 tattagtct 46437106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 22155829 - 22155936
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||  | |||||||| ||||||||| |||||||||||||||| || |||    
T  22155829 atttgattgacattttgtaaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttagg 22155928  T
Q  101 tattagtc 108  Q
    ||||||||    
T  22155929 tattagtc 22155936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 22211744 - 22211851
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||  | |||||||| ||||||||| |||||||||||||||| || |||    
T  22211744 atttgattgacattttgtaaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttagg 22211843  T
Q  101 tattagtc 108  Q
    ||||||||    
T  22211844 tattagtc 22211851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 35403601 - 35403708
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||| ||||||||||||||||||||||||||||| |||    
T  35403601 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttttaaaattcaaggacgaatttgagg 35403700  T
Q  101 tattagtc 108  Q
    ||||||||    
T  35403701 tattagtc 35403708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 47384401 - 47384293
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||| | ||| || ||||||||||||||||||||| | |||||||| |  |||||| ||||||||||||||||||| |||    
T  47384401 atttgattgacattttgtaaattcggggactaattagatatttcgcaaaattcaaggacgaatttggctcatttttcaaaattcaaggacgaatttgagg 47384302  T
Q  101 tattagtct 109  Q
    |||||||||    
T  47384301 tattagtct 47384293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 6605379 - 6605483
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||    | |||||||||||||||||||||||||||||| ||||| |||    
T  6605379 atttgattggcattttgtaaattcagggactaaatagctatttcgcaaaattcaggaacaaatttgaccgattttttaaaattcaaggacaaatttgagg 6605478  T
Q  101 tatta 105  Q
    |||||    
T  6605479 tatta 6605483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 45359425 - 45359336
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||  ||| |||||||||||||||||||||||| | || |||||||||||||||||||||||| |||| |||||||||||||||||    
T  45359425 aaattcaaggactaaatagatatttcgcaaaattcaaggacggatttgaccgattttttaaaattcatggacaaatttaaggtattagtc 45359336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 47386244 - 47386333
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    ||||| |||||| ||||| |||||||||||||||||| | |||||||||| |||||||||||||| |||||||||||| |||||||||||    
T  47386244 aaatttagagactaaataaatatttcgcaaaattcaaggacgaatttgactgattttttaaaattaaaggacgaatttgaggtattagtc 47386333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 34775105 - 34774997
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||| ||||||||||||||| ||| |||||| ||||| ||||||||||     ||||||||||||||||||||||||||| ||||||||| ||     
T  34775105 atttgattgatattttgtaaattcagggactaaatagctattttgcaaaattcatgaatgaatttgaccgattttttaaaattcaaagacgaatttgaga 34775006  T
Q  101 tattagtct 109  Q
    |||||||||    
T  34775005 tattagtct 34774997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 35402076 - 35401968
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||  ||||||||| ||||||||||||||||||| ||     
T  35402076 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgatttttcaaaattcaaggacgaatttgaga 35401977  T
Q  101 tattagtct 109  Q
    |||||||||    
T  35401976 tattagtct 35401968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 77996 - 78103
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||||| |||||||||||||||| |||||| | ||||||| ||||||||||  | |||| ||| ||||||||| ||||||||| ||||||||| |||    
T  77996 atttgattggcattttgtaaattcagggacaaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaagacgaatttgagg 78095  T
Q  101 tattagtc 108  Q
    ||||||||    
T  78096 tattagtc 78103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 39859264 - 39859354
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    |||||||  ||| |||||||||||||||||||||||  | | |||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  39859264 aaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccgattttttaaaattcaaggacgaatttgaggtattagtct 39859354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 30940460 - 30940549
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||| |||||| | || |||||||| |||||||||||||||||||| || |||||||||||||||||    
T  30940460 aaattcagggactaaatagatatttcgtaaaattaagagacgaatttggccgattttttaaaattcaagaacaaatttaaggtattagtc 30940549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 20479701 - 20479808
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||| ||||||||  | |||| ||| ||||||||| ||||||||||||| | ||| |||    
T  20479701 atttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgagg 20479800  T
Q  101 tattagtc 108  Q
    ||||||||    
T  20479801 tattagtc 20479808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 38549654 - 38549547
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||| ||||||||||||||||   ||  ||||||||||||| |||||||||  | |||| ||| | ||||||| |||||||||||||||||||||||    
T  38549654 atttgatggacattttgtaaattcgaggattaaatagatatttcacaaaattcagggacgaacttggctgatttttgaaaattcaaggacgaatttaagg 38549555  T
Q  101 tattagtc 108  Q
    ||||||||    
T  38549554 tattagtc 38549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 24228444 - 24228530
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 105  Q
    |||||||||||| |||||||||||||||||||||||  | |||||||| || ||||||||||||||||| ||||| || ||||||||    
T  24228444 aaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccaattttttaaaattcaagaacgaaattgaggtatta 24228530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 38474178 - 38474267
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||  ||| |||||||||||||||||||||||  | |||||||||||||||||| ||||||| ||||| ||||| |||||||||||    
T  38474178 aaattcaaggactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttaaaaattcgaggactaatttgaggtattagtc 38474267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 13039624 - 13039716
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaa 93  Q
    ||||||||||||||||| |||||||| ||| |||||| |||||||||||||| |  | |||||||||  ||||||| ||||||||||||||||    
T  13039624 atttgattgacattttgaaaattcagggactaaatagttatttcgcaaaatttagggacgaatttgattgatttttgaaaattcaaggacgaa 13039716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 27664537 - 27664433
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||| ||||||||||  | | || ||| ||||||||| ||||||||||||| ||||| |||    
T  27664537 atttgattgacattttgtaaattcagggactaatttgatattttgcaaaattcagggacaaaattggccgatttttcaaaattcaaggactaatttgagg 27664438  T
Q  101 tatta 105  Q
    |||||    
T  27664437 tatta 27664433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 37115561 - 37115651
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    ||||||||  || |||||||||||| ||||||||||    |||||||||| ||||||||||||||||| ||||||||| ||||||||||||    
T  37115561 aaattcaggtactaaatagatattttgcaaaattcaggaacgaatttgactgattttttaaaattcaatgacgaatttgaggtattagtct 37115651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 27666100 - 27666189
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | ||||||||||||||||||  | |||| ||| ||||||||| ||||||||||||||||||| |||||||||||    
T  27666100 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27666189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 29996567 - 29996638
Alignment:
Q  37 gatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    ||||||||||||||||||  | | || ||||||||||||| ||||||||||||||||||| |||||||||||    
T  29996567 gatatttcgcaaaattcagggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 29996638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 45361258 - 45361365
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||| ||||  ||| |||||  ||||| ||||||||||    | || |||||| ||||||||||||||||||| |||||| |||    
T  45361258 atttgattgacattttgtaagttcaaggactaaataactattttgcaaaattcaggaacaaaattgacccattttttaaaattcaaggaagaatttgagg 45361357  T
Q  101 tattagtc 108  Q
    ||||||||    
T  45361358 tattagtc 45361365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 13168196 - 13168142
Alignment:
Q  32 aaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaa 86  Q
    |||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  13168196 aaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaa 13168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 37796216 - 37796302
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 105  Q
    |||||||| ||| |||||||||||||||||||||  | | |||||||| | ||||||| ||||||||||||| ||||| ||||||||    
T  37796216 aaattcagggactaaatagatatttcgcaaaatttgaggacgaatttggctgatttttgaaaattcaaggacaaatttgaggtatta 37796302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 56419 - 56330
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | ||||||||||||||||||  | |||| ||  ||||||||| ||||||||||||||||||| |||||||||||    
T  56419 aaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 56330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 46439546 - 46439623
Alignment:
Q  32 aaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    ||||||||||||||||||||| |||| | | ||||| |||||||| ||||||||| ||||||||| || |||||||||    
T  46439546 aaatagatatttcgcaaaatttaaagacaagtttgatcgatttttaaaaattcaatgacgaatttgagatattagtct 46439623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 48311715 - 48311803
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaagga 89  Q
    ||||||||| |||||| ||||||||| ||  || |||| ||||||||||||| || |  ||||||||| ||||||||||||||||||||    
T  48311715 atttgattgccattttataaattcagggatgaattagacatttcgcaaaatttaaggatgaatttgactgattttttaaaattcaagga 48311803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 34776950 - 34777036
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 105  Q
    |||||||| ||| |||||||||||||||||||||||     ||||||| || ||||||||||||| ||| |||||||| ||||||||    
T  34776950 aaattcagggactaaatagatatttcgcaaaattcaggaatgaatttggccaattttttaaaatttaagaacgaatttgaggtatta 34777036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 23906307 - 23906356
Alignment:
Q  59 cgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| |||||||||||||||||||||| |||||| |||||||||||    
T  23906307 cgaatttggccgattttttaaaattcaaggaggaatttgaggtattagtc 23906356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 13018125 - 13018031
Alignment:
Q  18 taaattcagagacaaaatagatat--ttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtctg 110  Q
    ||||||||||||  ||||||||||  ||||| |||||  | | |||||||| | |||||||||||||||||||| |||||| |||||||| ||||    
T  13018125 taaattcagagatgaaatagatatatttcgctaaatttgaggacgaatttggctgattttttaaaattcaaggatgaatttgaggtattactctg 13018031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 29994955 - 29994907
Alignment:
Q  59 cgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagt 107  Q
    |||| ||| ||||||||| ||||||||||||||||||| ||||||||||    
T  29994955 cgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagt 29994907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 20478131 - 20478042
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | ||||||||| ||||||||    |||| ||| ||||||||| ||||||||||||| | ||| |||||||||||    
T  20478131 aaattcagggactaatttgatatttcgaaaaattcaggtacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 20478042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 2e-42; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 23291677 - 23291569
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||||||| |||||||||||||||||||||||||||||||||    
T  23291677 atttgattgacattttgtaaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttaagg 23291578  T
Q  101 tattagtct 109  Q
    |||||||||    
T  23291577 tattagtct 23291569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 30598444 - 30598337
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||||  | | |||||||||||||||| ||||||||||||||||||| |||    
T  30598444 atttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcagggacaaatttgaccgatttttgaaaattcaaggacgaatttgagg 30598345  T
Q  101 tattagtc 108  Q
    ||||||||    
T  30598344 tattagtc 30598337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 3150359 - 3150251
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||||||||||||| ||||||||||||||||||| |||    
T  3150359 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgagg 3150260  T
Q  101 tattagtct 109  Q
    |||||||||    
T  3150259 tattagtct 3150251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 44268088 - 44267981
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||| ||||||||  |||||||||| |||||||||||||||| ||  ||||||| ||||||||| ||||||||||||||||||| |||    
T  44268088 atttgattgacattttataaattcaaggacaaaatagctatttcgcaaaattcagagatgaatttggccgatttttgaaaattcaaggacgaatttgagg 44267989  T
Q  101 tattagtc 108  Q
    ||||||||    
T  44267988 tattagtc 44267981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 54900056 - 54900163
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| |||||| | ||||||||||||||||||  | |||| ||| ||||||||| ||||||||||||||||||| |||    
T  54900056 atttgattgacattttgtaaattcagggacaaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgagg 54900155  T
Q  101 tattagtc 108  Q
    ||||||||    
T  54900156 tattagtc 54900163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2378965 - 2379071
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  ||| |||||| ||||| ||||||||||  | |||| ||||||||||||||||||||||||||||||||| |||    
T  2378965 atttgattgacattttgtaaattcaaggactaaatagctattttgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgagg 2379064  T
Q  101 tattagt 107  Q
    |||||||    
T  2379065 tattagt 2379071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 27899136 - 27899225
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  27899136 aaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 27899225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 54898526 - 54898437
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  54898526 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 54898437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 611204 - 611312
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| | | |||||| ||||||| ||||||||  | |||||||| | ||||||||||||||||||||||||||| |||    
T  611204 atttgattgacattttgtaaattcaggggctaaatagctatttcgaaaaattcagggacgaatttggctgattttttaaaattcaaggacgaatttgagg 611303  T
Q  101 tattagtct 109  Q
    |||||||||    
T  611304 tattagtct 611312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 38193492 - 38193600
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||| ||||||||| ||||||||||||||||||| |||    
T  38193492 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgagg 38193591  T
Q  101 tattagtct 109  Q
    |||||||||    
T  38193592 tattagtct 38193600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 54412529 - 54412633
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||||||||||||||||||||||  || |||||||||| ||||||||||||| | ||||||||||| ||||||||||||||| |||||||||| ||     
T  54412529 atttgattgacattttgtaaattcaggaactaaatagatatctcgcaaaattcaaggacgaatttgaccaattttttaaaattcacggacgaatttgaga 54412628  T
Q  101 tatta 105  Q
    |||||    
T  54412629 tatta 54412633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 46308914 - 46308807
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||| ||||||||| ||||||||||||||||||| |||    
T  46308914 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgagg 46308815  T
Q  101 tattagtc 108  Q
    ||||||||    
T  46308814 tattagtc 46308807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 46310419 - 46310526
Alignment:
Q  2 tttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggt 101  Q
    ||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||||||||||||| ||||||||| ||||||||| ||||    
T  46310419 tttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaagacgaatttgaggt 46310518  T
Q  102 attagtct 109  Q
    ||||||||    
T  46310519 attagtct 46310526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 53094255 - 53094362
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||| ||||||||| ||||||||||||||||||| |||    
T  53094255 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgagg 53094354  T
Q  101 tattagtc 108  Q
    ||||||||    
T  53094355 tattagtc 53094362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 53187849 - 53187742
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||||||||||||| ||||||||||||| ||||| |||    
T  53187849 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacaaatttgagg 53187750  T
Q  101 tattagtc 108  Q
    ||||||||    
T  53187749 tattagtc 53187742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 53190814 - 53190904
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    |||||||| ||| |||||||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  53190814 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtct 53190904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 2226207 - 2226296
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  2226207 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 2226296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 21348812 - 21348723
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  21348812 aaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaaggacaaatttgaggtattagtc 21348723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17516955 - 17517050
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaattt 96  Q
    |||||||||||||||||||||||||  |||||||||  ||||||||||||||||    |||||||||||||||||| |||||||||||||||||||    
T  17516955 atttgattgacattttgtaaattcaaggacaaaataactatttcgcaaaattcatgaacgaatttgaccgatttttgaaaattcaaggacgaattt 17517050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 41979334 - 41979441
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||| ||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||| ||||||||| ||||||||||||||||||| |||    
T  41979334 atttgattgaaattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgagg 41979433  T
Q  101 tattagtc 108  Q
    ||||||||    
T  41979434 tattagtc 41979441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 10 - 105
Target Start/End: Original strand, 42282464 - 42282559
Alignment:
Q  10 acattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 105  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||| |  |||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  42282464 acattttgtaaattcaaggactaaatagatatttcgcaaaattcagaaacgaatttgactgatttttgaaaattcaaggacgaatttgaggtatta 42282559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 46114087 - 46114195
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccga-ttttttaaaattcaaggacgaatttaag 99  Q
    |||||||||||||||||||||||||  ||| |||||||||||||||||||||||| | | |||||| |||| ||||||||||||||||||  ||||| ||    
T  46114087 atttgattgacattttgtaaattcaatgactaaatagatatttcgcaaaattcaaggacaaatttggccgatttttttaaaattcaaggataaatttgag 46114186  T
Q  100 gtattagtc 108  Q
    ||| |||||    
T  46114187 gtagtagtc 46114195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 38192002 - 38191895
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||| || |||||| |||||| |||||||||||| |||    
T  38192002 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaggacgaatttgagg 38191903  T
Q  101 tattagtc 108  Q
    ||||||||    
T  38191902 tattagtc 38191895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 46611285 - 46611392
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||| ||||||||| ||| || | ||||||||||||||||||  | |||| |||||  |||||| ||||||||||||||||||| |||    
T  46611285 atttgattgacattttataaattcagggactaatttgatatttcgcaaaattcagggacgaaattgacaaatttttcaaaattcaaggacgaatttgagg 46611384  T
Q  101 tattagtc 108  Q
    ||||||||    
T  46611385 tattagtc 46611392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 46112576 - 46112486
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    |||||||  ||| |||||||||||| |||||||||||   |||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  46112576 aaattcatggactaaatagatattttgcaaaattcaataacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtct 46112486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 21350587 - 21350695
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||||    |||||||| ||||||||  |||| ||| ||| |||||| |||    
T  21350587 atttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcagtaacgaatttggccgattttaaaaaaatcacggatgaatttgagg 21350686  T
Q  101 tattagtct 109  Q
    |||||||||    
T  21350687 tattagtct 21350695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 35905767 - 35905843
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatt 95  Q
    |||||||| ||| |||||||||||||||||||||||  | ||||||||||||||||||||||||||||||| |||||    
T  35905767 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggatgaatt 35905843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 43765226 - 43765139
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattag 106  Q
    ||||||||| || ||||||||||||||||||||||     |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  43765226 aaattcagaaactaaatagatatttcgcaaaattccggaacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattag 43765139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 46609256 - 46609149
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | |||||||| |||||||||  | |||| ||| ||||||||| |||||||||| |||||||| ||     
T  46609256 atttgattgacattttgtaaattcagggactaatttgatatttcacaaaattcagggacgaaattggccgatttttcaaaattcaagaacgaatttgaga 46609157  T
Q  101 tattagtc 108  Q
    ||||||||    
T  46609156 tattagtc 46609149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2661890 - 2661992
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  ||| || | ||||||||||||||||||  | |||| |||  |||||||| ||||||||||||||||||| |||    
T  2661890 atttgattgacattttgtaaattcatggactaatttgatatttcgcaaaattcacggacgaaattggtcgatttttcaaaattcaaggacgaatttgagg 2661989  T
Q  101 tat 103  Q
    |||    
T  2661990 tat 2661992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 27897257 - 27897151
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||| ||||||||||||||||||| |||||| || || ||||||||||  | ||||||||| | ||||||||||||| ||| | |||||| |||    
T  27897257 atttgattgatattttgtaaattcagagactaaatagctaatt-gcaaaattcatggacgaatttgatccattttttaaaatttaagaaagaatttgagg 27897159  T
Q  101 tattagtc 108  Q
    ||||||||    
T  27897158 tattagtc 27897151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 28626518 - 28626411
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| |  | ||||||||| | ||||||  | |||| ||||||||||||| ||||||||||||| | ||| |||    
T  28626518 atttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaattgaccgatttttcaaaattcaaggactattttgagg 28626419  T
Q  101 tattagtc 108  Q
    ||||||||    
T  28626418 tattagtc 28626411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 35903932 - 35903825
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||| ||||||||||  |  ||| ||| | ||||||| ||||||||||||| ||||| |||    
T  35903932 atttgattgacattttgtaaattcagggactaatttgatattttgcaaaattcagggatgaaattggctgatttttcaaaattcaaggacaaatttgagg 35903833  T
Q  101 tattagtc 108  Q
    ||||||||    
T  35903832 tattagtc 35903825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 17515399 - 17515309
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    |||||||| ||| |||||||||||||||||||||||  |  ||||||| || |||||| |||||||||||| |||||| ||||||||||||    
T  17515399 aaattcagggactaaatagatatttcgcaaaattcagcgatgaatttggccaatttttaaaaattcaaggaagaatttgaggtattagtct 17515309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 23293225 - 23293314
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||  ||| |||||||||||||||||||||||| |||||||||| | |||||||  ||||||||| || ||||| |||||||||||    
T  23293225 aaattcatggactaaatagatatttcgcaaaattcaagggcgaatttggctgatttttcgaaattcaagaacaaatttgaggtattagtc 23293314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 30599973 - 30600062
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||||||||||||  | | |||||| ||||||| | |||||| |||||||||||| |||||||||||    
T  30599973 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttgtaaaaatttaaggacgaatttgaggtattagtc 30600062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 41977839 - 41977750
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | |||||||||| |||||||  | || ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  41977839 aaattcagggactaatttgatatttcgccaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 41977750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 44795872 - 44795979
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||| |||| ||||||||||||||  ||| || | ||||||||||||||||||    |||| ||  ||||||||| ||||||||||||||||||| |||    
T  44795872 atttgtttgatattttgtaaattcatggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaggacgaatttgagg 44795971  T
Q  101 tattagtc 108  Q
    ||||||||    
T  44795972 tattagtc 44795979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 51686376 - 51686483
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||  |||||||||||||||   ||| ||||| ||||||||||||||| |  | |||||||| | ||||||| |||||| |||||||||||| |||    
T  51686376 atttgatgaacattttgtaaattcgaggactaaataaatatttcgcaaaatttagggacgaatttggctgatttttgaaaatttaaggacgaatttgagg 51686475  T
Q  101 tattagtc 108  Q
    ||||||||    
T  51686476 tattagtc 51686483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 53092730 - 53092623
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||| ||||||||| ||  || | ||||||||||||||||||  | |||| ||| || |||||| |||||| || ||||||||| |||    
T  53092730 atttgattgacattttataaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaagacgaatttgagg 53092631  T
Q  101 tattagtc 108  Q
    ||||||||    
T  53092630 tattagtc 53092623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 7883435 - 7883328
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||| |||||||||||||||  || || | |||||||| ||||||| |  | |||| ||| ||||||||| ||||||||| |||||| || |||    
T  7883435 atttgattgaaattttgtaaattcaggaactaatttgatatttcacaaaatttagggacgaaattggccgatttttcaaaattcaaagacgaaattgagg 7883336  T
Q  101 tattagtc 108  Q
    ||||||||    
T  7883335 tattagtc 7883328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 48829463 - 48829356
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||| |||||||||||||| |   ||| |||||||||||||||||||||||      |||||| | || |||| ||||||||||||||||||| |||    
T  48829463 atttgatggacattttgtaaatccgaggactaaatagatatttcgcaaaattcaggaataaatttggctgaattttgaaaattcaaggacgaatttgagg 48829364  T
Q  101 tattagtc 108  Q
    ||||||||    
T  48829363 tattagtc 48829356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 7884942 - 7884988
Alignment:
Q  62 atttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  7884942 atttggccgattttttaaaattcaaggacgaatttgaggtattagtc 7884988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43767029 - 43767082
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattca 54  Q
    |||||||||||||||||||||||||  |||||||||| ||||| ||||||||||    
T  43767029 atttgattgacattttgtaaattcaaggacaaaatagctattttgcaaaattca 43767082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 51684699 - 51684610
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||  ||| |||||||||||| ||||||||||  |  ||||||| | ||||||| ||||||||||||||||||| || ||||||||    
T  51684699 aaattcaaggactaaatagatattttgcaaaattcagggatgaatttggctgatttttgaaaattcaaggacgaatttgagatattagtc 51684610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 42279596 - 42279510
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 105  Q
    |||||||| ||| |||||||||||| |||||||||  || ||||||   | ||||||| ||||||||| ||||||||| ||||||||    
T  42279596 aaattcagggactaaatagatattttgcaaaattctgagacgaattgagctgatttttgaaaattcaatgacgaatttgaggtatta 42279510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 2660283 - 2660218
Alignment:
Q  37 gatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggta 102  Q
    ||||||||||||||||||  | |||| |||  |||||||| ||||||||||||||||||| |||||    
T  2660283 gatatttcgcaaaattcagggacgaaattggtcgatttttcaaaattcaaggacgaatttgaggta 2660218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 690 - 735
Target Start/End: Complemental strand, 11015686 - 11015641
Alignment:
Q  690 tctacctatggaatccatccatcggacatcacaaacaaataccttt 735  Q
    ||||||||||||||||||| |  |||||||||||||||||||||||    
T  11015686 tctacctatggaatccatcaactggacatcacaaacaaataccttt 11015641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 44794296 - 44794208
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | ||||||||||||||||||  |  ||| ||| ||||||||  ||||||||||||||||||| |||||||||||    
T  44794296 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgattttc-aaaattcaaggacgaatttgaggtattagtc 44794208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 600801 - 600725
Alignment:
Q  32 aaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||||||| | ||||||||    | ||||||  ||||||||||||||||||||| |||||| |||||||||||    
T  600801 aaatagatattttgtaaaattcatgaacaaatttggtcgattttttaaaattcaaggatgaatttgaggtattagtc 600725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 46197809 - 46197750
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgatttttta 78  Q
    ||||||||  || |||||||||||| |||||||||| || ||||||||||||| ||||||    
T  46197809 aaattcaggaactaaatagatattttgcaaaattcagagacgaatttgaccgagttttta 46197750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 2377118 - 2377032
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 105  Q
    |||||||||||| ||||| || ||| ||||||||||  | ||||||||  | |||||| |||||||||  |||||||| ||||||||    
T  2377118 aaattcagagactaaatatattttttgcaaaattcagggacgaatttggtcaatttttgaaaattcaaaaacgaatttgaggtatta 2377032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 35572576 - 35572610
Alignment:
Q  71 attttttaaaattcaaggacgaatttaaggtatta 105  Q
    |||||||||||||||||||||||||||| ||||||    
T  35572576 attttttaaaattcaaggacgaatttaaagtatta 35572610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 3152273 - 3152362
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | ||||||||||||||||||  |  ||| ||| ||||||||| |||||| |||||  ||||| |||||||||||    
T  3152273 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaatttaaggataaatttgaggtattagtc 3152362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 4e-37; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 42943408 - 42943515
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||| |||    
T  42943408 atttgattgacattttgtaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgagg 42943507  T
Q  101 tattagtc 108  Q
    ||||||||    
T  42943508 tattagtc 42943515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 22273873 - 22273981
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| |||||||||||| |||||||||| || | |||||| ||||||||||||||||||||||| ||||| |||    
T  22273873 atttgattgacattttgtaaattcagggactaaatagatattttgcaaaattcagagacaaatttggccgattttttaaaattcaaggacaaatttgagg 22273972  T
Q  101 tattagtct 109  Q
    |||||||||    
T  22273973 tattagtct 22273981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 5038044 - 5038150
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| |||||| |||||||||||||||||   |||||||||||||||||||||||||||| ||||||||| |||    
T  5038044 atttgattgacattttgtaaattcagggactaaatagctatttcgcaaaattcaagaacgaatttgaccgattttttaaaattcaa-gacgaatttgagg 5038142  T
Q  101 tattagtc 108  Q
    ||||||||    
T  5038143 tattagtc 5038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 35510801 - 35510908
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | |||||||| |||||||||| | |||| ||||||||||||| ||||||||||||||||||| |||    
T  35510801 atttgattgacattttgtaaattcagggactaatttgatatttcacaaaattcaaggacgaaattgaccgatttttcaaaattcaaggacgaatttgagg 35510900  T
Q  101 tattagtc 108  Q
    ||||||||    
T  35510901 tattagtc 35510908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 29237258 - 29237151
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||| ||||||||  | |||| ||||||||||||| ||||||||||||||||||| |||    
T  29237258 atttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgagg 29237159  T
Q  101 tattagtc 108  Q
    ||||||||    
T  29237158 tattagtc 29237151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 35509321 - 35509214
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||||||||||||| ||||||||||||| ||||| |||    
T  35509321 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggactaatttgagg 35509222  T
Q  101 tattagtc 108  Q
    ||||||||    
T  35509221 tattagtc 35509214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 13282567 - 13282477
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    |||||||| ||| |||||||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  13282567 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtct 13282477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 601686 - 601794
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||| ||||||||  | |||| ||| ||||||||| ||||||||||||||||||| |||    
T  601686 atttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgagg 601785  T
Q  101 tattagtct 109  Q
    |||||||||    
T  601786 tattagtct 601794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 8608345 - 8608237
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaagg-cgaatttgaccgattttttaaaattcaaggacgaatttaag 99  Q
    |||||||||||||||| ||||||||| ||| || | ||||||||||||||||  | || |||| ||||||||||||| ||||||||||||||||||||||    
T  8608345 atttgattgacattttataaattcagggactaatttgatatttcgcaaaatttcagggacgaaattgaccgatttttcaaaattcaaggacgaatttaag 8608246  T
Q  100 gtattagtc 108  Q
    |||||||||    
T  8608245 gtattagtc 8608237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26238833 - 26238726
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||| ||||||||||||||||   ||| |||||||||||||||||||||||  | |||||||| | ||||||| ||||||||||||||||||| |||    
T  26238833 atttgatggacattttgtaaattcgaggactaaatagatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgagg 26238734  T
Q  101 tattagtc 108  Q
    ||||||||    
T  26238733 tattagtc 26238726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 33762695 - 33762802
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||| ||||||||  | |||| ||| ||||||||| ||||||||||||||||||| |||    
T  33762695 atttgattgacattttgtaaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgagg 33762794  T
Q  101 tattagtc 108  Q
    ||||||||    
T  33762795 tattagtc 33762802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33707313 - 33707207
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||| ||||||||| ||| || | ||||||||| ||||||||  | |||| ||||||||||||| ||||||||||||||||||| |||    
T  33707313 atttgattgacattttataaattcagggactaatttgatatttcgtaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgagg 33707214  T
Q  101 tattagt 107  Q
    |||||||    
T  33707213 tattagt 33707207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 8609842 - 8609931
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||||||||||||  | |||||||| |||||||||||||||||||| |||||||| |||||||||||    
T  8609842 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagaacgaatttgaggtattagtc 8609931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 9672084 - 9671980
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||| ||||||||||||| | ||| |||||||||||||||||||||||  | |||||||||  ||||  | |||||||||||||||||||||||    
T  9672084 atttgattgaaattttgtaaattcggggactaaatagatatttcgcaaaattcatggacgaatttgattgattggtgaaaattcaaggacgaatttaagg 9671985  T
Q  101 tatta 105  Q
    |||||    
T  9671984 tatta 9671980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 13484652 - 13484544
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  |||||||||   |||||||||||||||  | |||||||| ||||||||| ||||||||| ||||||||| |||    
T  13484652 atttgattgacattttgtaaattcaaggacaaaataacaatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatgacgaatttgagg 13484553  T
Q  101 tattagtct 109  Q
     ||||||||    
T  13484552 cattagtct 13484544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 41823997 - 41823889
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||  |||||||||||||||   ||| |||||||||||||||||||||||| | |||| ||  | ||||||| |||||||||||||||||||||||    
T  41823997 atttgatgaacattttgtaaattcgaggactaaatagatatttcgcaaaattcaaggacgaaattagctgatttttgaaaattcaaggacgaatttaagg 41823898  T
Q  101 tattagtct 109  Q
    |||||||||    
T  41823897 tattagtct 41823889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 13106911 - 13106804
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||| ||||| ||||||||| ||| || | ||||||||||||||||||  |  ||| ||| ||||||||| |||||||||||||||||||||||    
T  13106911 atttgattgaaattttataaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttaagg 13106812  T
Q  101 tattagtc 108  Q
    ||||||||    
T  13106811 tattagtc 13106804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 27692819 - 27692926
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||| ||||||||||||||||||||| ||| || | ||||||| ||||||||||  | |||| ||| ||||||||| ||||||||||||||||||| |||    
T  27692819 atttaattgacattttgtaaattcagggactaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgagg 27692918  T
Q  101 tattagtc 108  Q
    ||||||||    
T  27692919 tattagtc 27692926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 33761176 - 33761069
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||| | ||||||| ||||||||| ||||||||| |||    
T  33761176 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggctgatttttcaaaattcaaagacgaatttgagg 33761077  T
Q  101 tattagtc 108  Q
    ||||||||    
T  33761076 tattagtc 33761069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 38548813 - 38548920
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||| ||||||||||||||| ||  || | ||||||||||||||||||  | |||| ||| ||||||||| ||||||||||||||||||| |||    
T  38548813 atttgattgaaattttgtaaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgagg 38548912  T
Q  101 tattagtc 108  Q
    ||||||||    
T  38548913 tattagtc 38548920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 29239169 - 29239277
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||| ||||||||||||||| ||| || | ||||||||| |||||| |  | |||| ||| ||||||||| ||||||||||||||||||| |||    
T  29239169 atttgattgatattttgtaaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggacgaatttgagg 29239268  T
Q  101 tattagtct 109  Q
    |||||||||    
T  29239269 tattagtct 29239277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 34681079 - 34681155
Alignment:
Q  32 aaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||||||||||||||||||  | |||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  34681079 aaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 34681155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 41040827 - 41040720
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  |||||||||| ||||| | |||||||| |  |||||||  ||||||||| ||||||||| ||| ||||| |||    
T  41040827 atttgattgacattttgtaaattcaaggacaaaatagctattttggaaaattcagaaacgaatttagccgatttttaaaaattcaaagacaaatttgagg 41040728  T
Q  101 tattagtc 108  Q
    ||||||||    
T  41040727 tattagtc 41040720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 43262119 - 43262226
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||||||||||||||||||||   ||| ||||||||||||||||||||| |  | |||||||  | ||||||| |||||| |||||||||||| |||    
T  43262119 atttgattgacattttgtaaattcgaggactaaatagatatttcgcaaaatttagggtcgaatttagctgatttttgaaaatttaaggacgaatttgagg 43262218  T
Q  101 tattagtc 108  Q
    ||||||||    
T  43262219 tattagtc 43262226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 13486154 - 13486243
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||||||||| || || ||||| |||||||||||| |||||||||| || ||||| |||||||||||    
T  13486154 aaattcagggactaaatagatatttcgcaaaatccagagacgaatctgaccgatttttaaaaattcaagcacaaatttgaggtattagtc 13486243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 41042639 - 41042728
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| ||||||||||||| |||||||||  | | |||||| || ||||||||||||||||||||| ||||||||||||||||    
T  41042639 aaattcagggactaaatagatatttcacaaaattcagggacaaatttggccaattttttaaaattcaaggacggatttaaggtattagtc 41042728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 5036534 - 5036446
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagt 107  Q
    |||||||  ||| ||||||||||||| |||||||||  | |||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  5036534 aaattcaaggactaaatagatatttcacaaaattcagggacgaatttgacggattttttaaaatttaaggacgaatttgaggtattagt 5036446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 13283977 - 13284081
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  ||| || | ||||||||||||||||||  | | || ||| ||||||||| |||||||||||||||||||  ||    
T  13283977 atttgattgacattttgtaaattcatggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttgtgg 13284076  T
Q  101 tatta 105  Q
    |||||    
T  13284077 tatta 13284081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 15308243 - 15308350
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||| | ||||||  | |||| ||| ||||||||| ||||||||||||| | ||| |||    
T  15308243 atttgattgacattttgtaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgagg 15308342  T
Q  101 tattagtc 108  Q
    ||||||||    
T  15308343 tattagtc 15308350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 15488612 - 15488719
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||| | ||||||  | |||| ||| ||||||||| ||||||||||||| | ||| |||    
T  15488612 atttgattgacattttgtaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgagg 15488711  T
Q  101 tattagtc 108  Q
    ||||||||    
T  15488712 tattagtc 15488719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 41825699 - 41825785
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 105  Q
    |||||||| ||| |||||||||||||||||||||||| | |||||||    ||||||| ||||||||||||||||||| ||||||||    
T  41825699 aaattcagggactaaatagatatttcgcaaaattcaaggacgaatttatttgatttttgaaaattcaaggacgaatttgaggtatta 41825785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 42941863 - 42941777
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 105  Q
    |||||||| ||| ||||| ||||||| |||||||||  | |||||||| | ||||||||||||||||||||||||||| ||||||||    
T  42941863 aaattcagggactaaataaatatttctcaaaattcagggacgaatttggctgattttttaaaattcaaggacgaatttgaggtatta 42941777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 27691243 - 27691154
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | ||||||||||||||||||  | |||| ||| ||||||||| ||||||||||||||||||| |||||||||||    
T  27691243 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27691154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 38547317 - 38547228
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | ||||||||||||||||||  | || ||||| |||||||||||||||||||||||||| || |||||||||||    
T  38547317 aaattcagggactaatttgatatttcgcaaaattcatggacgtatttggccgattttttaaaattcaaggacgaacttgaggtattagtc 38547228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 22272425 - 22272334
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccga--ttttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| ||||||||||| |||||||||||  | |||||||||| ||  ||||||||||||||| ||||||||| |||||||||||    
T  22272425 aaattcagggactaaatagatattacgcaaaattcagggacgaatttgactgattttttttaaaattcaaagacgaatttgaggtattagtc 22272334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 7745167 - 7745257
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    |||| ||| ||| ||||| ||||||||||||||||| || |||||||| | ||||||| ||||||||| ||||||||| || |||||||||    
T  7745167 aaatacagggactaaataaatatttcgcaaaattcagagacgaatttggctgatttttgaaaattcaaagacgaatttgagatattagtct 7745257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 26242369 - 26242455
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 105  Q
    |||||||||||| ||||||||||||||||||||| |  | |||||||| | ||||||| |||||||||| ||||| || ||||||||    
T  26242369 aaattcagagactaaatagatatttcgcaaaatttagggacgaatttggctgatttttgaaaattcaagaacgaaattgaggtatta 26242455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 13108391 - 13108480
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | ||||||||||||||||||  | || ||||  ||||||||||||||||||||||||||||| || ||||||||    
T  13108391 aaattcagggactaatttgatatttcgcaaaattcagggacgtatttagccgattttttaaaattcaaggacgaatttgagttattagtc 13108480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 395 - 458
Target Start/End: Original strand, 15348480 - 15348543
Alignment:
Q  395 gttactggtgaattttcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctct 458  Q
    ||||| |||||| | |||||| |||||||||||||||||||||| |||||||||||| ||||||    
T  15348480 gttaccggtgaagtctcttatacgtttcaaatgcgtttgtaagtcttggttttctcttatctct 15348543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 33708878 - 33708947
Alignment:
Q  38 atatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||||||||||||  | |||| ||||||| |||||||||||||||||| |||||| |||||||||||    
T  33708878 atatttcgcaaaattcagggacgaaattgaccg-ttttttaaaattcaaggatgaatttgaggtattagtc 33708947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 3152064 - 3151967
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaa 98  Q
    ||||||||||||||||||||||| || ||| |||||| ||||| | |||| |||  | | |||||| || ||||||| |||||||||||| |||||||    
T  3152064 atttgattgacattttgtaaattaagggactaaatagctattttgaaaaactcagggacaaatttggccaatttttttaaattcaaggacaaatttaa 3151967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15562530 - 15562439
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaa 93  Q
    |||||||||||||||| ||||||| || || |||| |||||||  ||||||| || | |||||||||| ||||||| ||||||||| ||||||    
T  15562530 atttgattgacattttataaattcgga-actaaattgatattttacaaaatttaaggacgaatttgactgatttttaaaaattcaaagacgaa 15562439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 27404317 - 27404213
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||| |||||| || ||| |  | ||||||||| | ||||||  | |||| ||| ||||||||| ||||||||||||| | ||| |||    
T  27404317 atttgattgacattttataaatttagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgagg 27404218  T
Q  101 tatta 105  Q
    |||||    
T  27404217 tatta 27404213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 600819 - 600760
Alignment:
Q  49 aattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    ||||||| | |||| ||| | ||||||| ||||||||||||||||||| |||||||||||    
T  600819 aattcaaggacgaaattggctgatttttcaaaattcaaggacgaatttgaggtattagtc 600760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 759 - 813
Target Start/End: Complemental strand, 4031990 - 4031936
Alignment:
Q  759 atttatatggttttgggtatgatcactcaacaaatgattatttagtggtttcaat 813  Q
    |||||||||||||||||||||| || ||||||||||| ||  | |||||||||||    
T  4031990 atttatatggttttgggtatgaccagtcaacaaatgactacctggtggtttcaat 4031936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 695 - 745
Target Start/End: Complemental strand, 4032072 - 4032022
Alignment:
Q  695 ctatggaatccatccatcggacatcacaaacaaatacctttgtctcctatt 745  Q
    ||||||||| ||||||| |||  |||||||||||||||||| |||||||||    
T  4032072 ctatggaattcatccattggagttcacaaacaaatacctttatctcctatt 4032022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 3e-35; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 19906789 - 19906685
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||  | ||| |||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  19906789 atttgattgacattttgtaaattatgggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttaagg 19906690  T
Q  101 tatta 105  Q
    |||||    
T  19906689 tatta 19906685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 39663261 - 39663154
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||  | |||||||||||||||||| ||||||||||||||||||| |||    
T  39663261 atttgattgacattttgtaaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgatttttaaaaattcaaggacgaattttagg 39663162  T
Q  101 tattagtc 108  Q
    ||||||||    
T  39663161 tattagtc 39663154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 16376843 - 16376736
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||| ||||||||||||||| ||| |||||| ||||||| ||||||||  | |||||||||||||||||||||||||||| ||||||||| |||    
T  16376843 atttgattgatattttgtaaattcagggactaaatagctatttcgtaaaattcagggacgaatttgaccgattttttaaaattcaaagacgaatttgagg 16376744  T
Q  101 tattagtc 108  Q
    ||||||||    
T  16376743 tattagtc 16376736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 16763165 - 16763076
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  16763165 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttaaaaattcaaggacgaatttgaggtattagtc 16763076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 14387456 - 14387348
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||| ||||||||  | |||| ||| ||||||||| ||||||||||||||||||| |||    
T  14387456 atttgattgacattttgtaaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgagg 14387357  T
Q  101 tattagtct 109  Q
    |||||||||    
T  14387356 tattagtct 14387348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 34400421 - 34400314
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||| ||||||||||||||  |||||||||| ||||||||||||||||  |  ||||||| ||||||||| |||||||||||| |||||| |||    
T  34400421 atttgattgatattttgtaaattcaaggacaaaatagctatttcgcaaaattcagggatgaatttggccgatttttgaaaattcaaggatgaatttgagg 34400322  T
Q  101 tattagtc 108  Q
    ||||||||    
T  34400321 tattagtc 34400314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 14389122 - 14389228
Alignment:
Q  2 tttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggt 101  Q
    |||||| ||||||| | |||||||| ||| |||||||||||||||||||||||  | |||||||| ||||||||| ||||||||| ||||||||| ||||    
T  14389122 tttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatgacgaatttgaggt 14389221  T
Q  102 attagtc 108  Q
    |||||||    
T  14389222 attagtc 14389228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 16764594 - 16764700
Alignment:
Q  2 tttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggt 101  Q
    ||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||| ||||||| | ||||||||||||||||||| ||||    
T  16764594 tttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaaggacgaatttgaggt 16764693  T
Q  102 attagtc 108  Q
    |||||||    
T  16764694 attagtc 16764700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 2767023 - 2766934
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||||||| || ||||||||    
T  2767023 aaattcagggactaaatagatatttcgcaaaattcaaggacgagtttgaccgatttttaaaaattcaaggacgaatttgagctattagtc 2766934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 39456762 - 39456869
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||| ||||||||| ||| |||||| ||||| ||||||||||  | ||||||| ||| ||||||||||||||||||| |||||| | |    
T  39456762 atttgattgacattttataaattcagggactaaatagctattttgcaaaattcatggacgaatttaaccaattttttaaaattcaaggatgaatttgaag 39456861  T
Q  101 tattagtc 108  Q
    ||||||||    
T  39456862 tattagtc 39456869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 40561860 - 40561967
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | | |||||| ||||||||| || |||| ||| ||||||||| ||||||||| ||||||||| |||    
T  40561860 atttgattgacattttgtaaattcagggactaatttgctatttcacaaaattcagagacgaaattggccgatttttcaaaattcaaagacgaatttgagg 40561959  T
Q  101 tattagtc 108  Q
    ||||||||    
T  40561960 tattagtc 40561967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 39664803 - 39664892
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||| |||||||   | |||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  39664803 aaattcagggactaaatagatatttcgtaaaattcggggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 39664892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 44709800 - 44709889
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||| ||||||||||||||||  | |||||||| ||| ||||||||||||||||||||||||| |||||||||||    
T  44709800 aaattcagggactaaatagttatttcgcaaaattcagggccgaatttggccggttttttaaaattcaaggacgaatttgaggtattagtc 44709889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 6783471 - 6783364
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||| | | ||||||  | |||| ||||||||||||||||||||||||||| | ||| |||    
T  6783471 atttgattgacattttgtaaattcagggactaatttgatattttgaataattcagggacgaaattgaccgattttttaaaattcaaggactattttgagg 6783372  T
Q  101 tattagtc 108  Q
    ||||||||    
T  6783371 tattagtc 6783364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 24205705 - 24205598
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||| ||||||||  | |||| ||| ||||||||| ||||||||||||| | ||| |||    
T  24205705 atttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgagg 24205606  T
Q  101 tattagtc 108  Q
    ||||||||    
T  24205605 tattagtc 24205598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 40560312 - 40560223
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||||||||||||  | |||||||| | ||||||||||||||||| ||||||||| | |||||||||    
T  40560312 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggctgattttttaaaattcaaagacgaatttgaagtattagtc 40560223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 19581521 - 19581413
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||| ||||||| ||||||||   ||| |||||||||||||||||||||||  | | |||||| | ||||||| |||||| |||||||||||| |||    
T  19581521 atttgatggacatttggtaaattcgaggactaaatagatatttcgcaaaattcagggacaaatttggctgatttttaaaaatttaaggacgaatttgagg 19581422  T
Q  101 tattagtct 109  Q
    |||||||||    
T  19581421 tattagtct 19581413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 19908301 - 19908392
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgatttt-ttaaaattcaaggacgaatttaaggtattagtct 109  Q
    |||||||  ||| |||||||||||||||||||||||  | | |||||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  19908301 aaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccgatttttttaaaattcaaggacgaatttgaggtattagtct 19908392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 37022167 - 37022274
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||| ||||||||  | |||| |||  |||||||| ||||||||||||| | ||| |||    
T  37022167 atttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggtcgatttttcaaaattcaaggactattttgagg 37022266  T
Q  101 tattagtc 108  Q
    ||||||||    
T  37022267 tattagtc 37022274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 6799401 - 6799494
Alignment:
Q  12 attttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 105  Q
    ||||| ||||||||  |||||||||| ||||| ||||||||||  | |||||||| ||||||||| ||||||||||||||||||| || |||||    
T  6799401 attttataaattcaaggacaaaatagctatttggcaaaattcatggacgaatttgtccgatttttaaaaattcaaggacgaatttgagatatta 6799494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2577462 - 2577569
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||  ||||||||  | |||| |||  |||||||| ||||||||||||| | ||| |||    
T  2577462 atttgattgacattttgtaaattcagggactaatttgatatttcaaaaaattcagggacgaaattggacgatttttcaaaattcaaggactattttgagg 2577561  T
Q  101 tattagtc 108  Q
    ||||||||    
T  2577562 tattagtc 2577569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 17696312 - 17696209
Alignment:
Q  2 tttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggt 101  Q
    |||||||||| |||   |||||||| ||| ||||||||||||  |||||||||  |  ||||||| ||||||||| ||||||||||||||||||| ||||    
T  17696312 tttgattgacgtttgtaaaattcagggactaaatagatattttccaaaattcagggatgaatttggccgatttttgaaaattcaaggacgaatttgaggt 17696213  T
Q  102 atta 105  Q
    ||||    
T  17696212 atta 17696209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 42517664 - 42517558
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaat---ttgaccgattttttaaaattcaaggacgaattta 97  Q
    |||||||||||||||||||||||||  |||||||||| ||||||| |||||    || ||| |   ||| ||||||||| |||||||||||||||||||     
T  42517664 atttgattgacattttgtaaattcaaggacaaaatagctatttcgtaaaat----agccgatttgattggccgatttttaaaaattcaaggacgaatttg 42517569  T
Q  98 aggtattagtc 108  Q
    |||||||||||    
T  42517568 aggtattagtc 42517558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 42519260 - 42519346
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaa-ttcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatt 104  Q
    |||||||| ||| |||||||||||| |||||| ||||| | | ||||||| | |||||||||||||||||||||||||| |||||||    
T  42519260 aaattcagggactaaatagatattttgcaaaaattcaaggactaatttgatcaattttttaaaattcaaggacgaatttgaggtatt 42519346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 37646460 - 37646552
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaa 93  Q
    ||||||||| ||||||| |||||||| ||| |||||||||||||||| ||||  | | |||||||||| ||||||| ||| |||||| |||||    
T  37646460 atttgattggcattttgaaaattcagggactaaatagatatttcgcagaatttgaggacgaatttgactgatttttgaaagttcaagaacgaa 37646552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 6797596 - 6797507
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    ||||| || ||| |||||||||||||||||||||||    |||||||  || ||||||||||||||||  | ||||||||||||||||||    
T  6797596 aaattaagggactaaatagatatttcgcaaaattcaggaacgaatttagccaattttttaaaattcaaatatgaatttaaggtattagtc 6797507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 39455258 - 39455169
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||  ||| |||||||||||| ||||||||||     |||||| |||||||||||||||||||||||| ||||| || ||||||||    
T  39455258 aaattcatggactaaatagatattttgcaaaattcaggactgaatttaaccgattttttaaaattcaaggacaaatttgagatattagtc 39455169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17698091 - 17698140
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaa 50  Q
    |||||||||||||||||||||||||  |||||||||| ||||||| ||||    
T  17698091 atttgattgacattttgtaaattcaaggacaaaatagctatttcggaaaa 17698140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 31475061 - 31475166
Alignment:
Q  1 atttgattgacatttt-gtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaag 99  Q
    |||||||||||||||| | |||||||| ||  ||||||||||||| |||||||    | |||||||||| ||||||| |||||| ||| ||||| || ||    
T  31475061 atttgattgacatttttgaaaattcagggattaaatagatatttctcaaaatttggtgacgaatttgactgatttttgaaaattaaagaacgaagttgag 31475160  T
Q  100 gtatta 105  Q
    ||||||    
T  31475161 gtatta 31475166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 37020597 - 37020508
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | ||||||||  ||||||||| | | || ||||||||||||| ||||||||||||| | ||| |||||||||||    
T  37020597 aaattcagggactaatttgatatttcaaaaaattcaaggacaaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 37020508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 37645576 - 37645481
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtctgccat 114  Q
    |||||||  ||| |||||||||||||  |||||| || | |||||| ||| ||||||| |||||||||||||||| ||  ||||||| ||| ||||    
T  37645576 aaattcaaggactaaatagatatttcctaaaatttaaggacgaattcgactgatttttaaaaattcaaggacgaagttggggtattactctaccat 37645481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 1e-34; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 49524715 - 49524822
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||  | |||||||||||||||||||||||||||||||||||||| |||    
T  49524715 atttgattgacattttgtaaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgagg 49524814  T
Q  101 tattagtc 108  Q
    ||||||||    
T  49524815 tattagtc 49524822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 35401856 - 35401749
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  ||| ||||||||||||| |||||||||  | |||||||| ||||||||||||||||||||||||||||| |||    
T  35401856 atttgattgacattttgtaaattcaaggactaaatagatatttcacaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgagg 35401757  T
Q  101 tattagtc 108  Q
    ||||||||    
T  35401756 tattagtc 35401749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20493934 - 20493827
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||||||||||||||||||||||  || ||||||||||||||||||||||||   |||||||| ||||| ||||||||||||| ||||||||| |||    
T  20493934 atttgattgacattttgtaaattcaggaactaaatagatatttcgcaaaattcaagaacgaatttggccgatattttaaaattcaatgacgaatttgagg 20493835  T
Q  101 tattagtc 108  Q
    ||||||||    
T  20493834 tattagtc 20493827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 39345671 - 39345576
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaattt 96  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||  | |||||||| |||||||||||||||||||||||||||||    
T  39345671 atttgattgacattttgtaaattcagggactaaatagctatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaattt 39345576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 355 - 481
Target Start/End: Original strand, 48862819 - 48862945
Alignment:
Q  355 tgtttctacctcatgatttgatcatccaaatactgctaatgttactggtgaattttcttattcgtttcaaatgcgtttgtaagttttggttttctctaat 454  Q
    ||||||| |||||||| |||||||||| ||| ||||||| ||||| |||||| | |||||||||||||||||||||||| |||| |||||||||||| ||    
T  48862819 tgtttctgcctcatgaattgatcatcctaatcctgctaaggttaccggtgaagtctcttattcgtttcaaatgcgtttgcaagtcttggttttctcttat 48862918  T
Q  455 ctctcatgataccgagtttgcaaattc 481  Q
    |||||||||| |  | |||||||||||    
T  48862919 ctctcatgatcctcactttgcaaattc 48862945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 4169792 - 4169685
Alignment:
Q  2 tttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggt 101  Q
    ||||||||||||||||||||||||| ||| || | |||||||||||||||||| || |||| |||| | |||||| ||||||||||||||||||| ||||    
T  4169792 tttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagagacgaaattgatcaatttttcaaaattcaaggacgaatttgaggt 4169693  T
Q  102 attagtct 109  Q
    ||||||||    
T  4169692 attagtct 4169685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 43507274 - 43507167
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||| ||||||||| ||||||||||||||||||| |||    
T  43507274 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgagg 43507175  T
Q  101 tattagtc 108  Q
    ||||||||    
T  43507174 tattagtc 43507167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 43508635 - 43508742
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||| ||||||||| ||||||||||||||||||| |||    
T  43508635 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgagg 43508734  T
Q  101 tattagtc 108  Q
    ||||||||    
T  43508735 tattagtc 43508742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 319379 - 319273
Alignment:
Q  2 tttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggt 101  Q
    |||||||||||||||||||||||||  || || | ||||||||||||||||||  | |||| ||||||||||||| ||||||||||||||||||| ||||    
T  319379 tttgattgacattttgtaaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggt 319280  T
Q  102 attagtc 108  Q
    |||||||    
T  319279 attagtc 319273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 51012015 - 51011925
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    |||||||||||| ||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||| || |||||||||    
T  51012015 aaattcagagactaaatagatatttcgcaaaattcaagaaagaatttgaccgattttttaaaattcaaggacgaatttgagatattagtct 51011925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 48645362 - 48645254
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||  |||||||||||||||   ||| |||||||||||||||||||||||  | |||||||||| ||||||| ||||||||||||||||||| |||    
T  48645362 atttgatgaacattttgtaaattcgaggactaaatagatatttcgcaaaattcatggacgaatttgactgatttttgaaaattcaaggacgaatttgagg 48645263  T
Q  101 tattagtct 109  Q
    |||||||||    
T  48645262 tattagtct 48645254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 11254226 - 11254123
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  ||||||| || |||||||||||||| | || || ||||| ||||||||| ||||||||||||||||||| |||    
T  11254226 atttgattgacattttgtaaattcaaggacaaaagagctatttcgcaaaatttagagacggatttggccgatttttaaaaattcaaggacgaatttgagg 11254127  T
Q  101 tatt 104  Q
    ||||    
T  11254126 tatt 11254123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 33264489 - 33264382
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||||||||||||||||||||||  || || | ||||||| ||||||||||  | |||| ||||||||||||| ||||||||||||||||||| |||    
T  33264489 atttgattgacattttgtaaattcaggaactaatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgagg 33264390  T
Q  101 tattagtc 108  Q
    ||||||||    
T  33264389 tattagtc 33264382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 42982434 - 42982541
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  |||||||||  ||||||||||||||||  | |||||||||| ||||||| ||||||||||||  ||||||| |    
T  42982434 atttgattgacattttgtaaattcaaggacaaaataactatttcgcaaaattcagggacgaatttgacagatttttaaaaattcaaggaaaaatttaacg 42982533  T
Q  101 tattagtc 108  Q
    ||||||||    
T  42982534 tattagtc 42982541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 51013868 - 51013975
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| |||  | | ||||||| ||||||||||  | |||| ||||||||||||| ||||||||||||||||||| |||    
T  51013868 atttgattgacattttgtaaattcagggactcatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgagg 51013967  T
Q  101 tattagtc 108  Q
    ||||||||    
T  51013968 tattagtc 51013975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 4173724 - 4173829
Alignment:
Q  3 ttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggta 102  Q
    ||||||||| |||||||||||||| ||| || | ||||||||||||||||||  | |||| ||| ||||||||| ||||||||||||||||||| |||||    
T  4173724 ttgattgacgttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggta 4173823  T
Q  103 ttagtc 108  Q
    ||||||    
T  4173824 ttagtc 4173829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 648 - 809
Target Start/End: Original strand, 48898585 - 48898746
Alignment:
Q  648 gttcgtgtagagggtttatacttttgcattctggtgcatgcttctacctatggaatccatccatcggacatcacaaacaaatacctttgtctcctattga 747  Q
    |||| |||||||| ||||||||||||||| || |  ||    || |||||||||||||||||| ||||  |||||||||||||||||||||||||| | |    
T  48898585 gttcatgtagaggctttatacttttgcatacttgctcagatatccacctatggaatccatccaccggagctcacaaacaaatacctttgtctcctaatca 48898684  T
Q  748 ttatatttttaatttatatggttttgggtatgatcactcaacaaatgattatttagtggttt 809  Q
    || |  |||  |||| |||||||||||||||||||| | |||| ||||||| ||||||||||    
T  48898685 tttttctttatatttctatggttttgggtatgatcagttaacagatgattacttagtggttt 48898746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 52868183 - 52868254
Alignment:
Q  18 taaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaagga 89  Q
    ||||||||||||| ||||||||||||||||||||| | || |||||||||||||||||||||||||||||||    
T  52868183 taaattcagagactaaatagatatttcgcaaaatttatagacgaatttgaccgattttttaaaattcaagga 52868254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 43521091 - 43521193
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||||  |||| ||||| ||||||| |||||||||| || ||||| |||    
T  43521091 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcaaaaacgaaattgactgatttttcaaaattcaagaacaaatttgagg 43521190  T
Q  101 tat 103  Q
    |||    
T  43521191 tat 43521193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 320884 - 320989
Alignment:
Q  3 ttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggta 102  Q
    |||||||||||||||||| ||||  ||| || | ||||||||||||||||||| |  ||| ||| ||||||||| ||||||||||||||||||| |||||    
T  320884 ttgattgacattttgtaatttcaaggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggta 320983  T
Q  103 ttagtc 108  Q
    ||||||    
T  320984 ttagtc 320989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 49523213 - 49523125
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagt 107  Q
    |||||||| ||| |||||||||||||||||||||||  | |||||||  ||||||||||||||||||| ||||||||| ||||||||||    
T  49523213 aaattcagggactaaatagatatttcgcaaaattcatggacgaatttagccgattttttaaaattcaatgacgaatttgaggtattagt 49523125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 621 - 742
Target Start/End: Original strand, 48870381 - 48870502
Alignment:
Q  621 aatcttatttcgatattggaattaaaggttcgtgtagagggtttatacttttgcattctggtgcatgcttctacctatggaatccatccatcggacatca 720  Q
    |||||||||  ||| ||| |||||||||||| |||||||| |||||| | ||||||| || | ||  | ||||||||||||||||||||| ||||  |||    
T  48870381 aatcttattatgattttgaaattaaaggttcatgtagaggctttatattattgcattgtgctccaaccctctacctatggaatccatccaccggatttca 48870480  T
Q  721 caaacaaatacctttgtctcct 742  Q
    ||||||||||||||||| ||||    
T  48870481 caaacaaatacctttgtgtcct 48870502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 621 - 742
Target Start/End: Original strand, 48886067 - 48886188
Alignment:
Q  621 aatcttatttcgatattggaattaaaggttcgtgtagagggtttatacttttgcattctggtgcatgcttctacctatggaatccatccatcggacatca 720  Q
    |||||||||  ||| ||| |||||||||||| |||||||| |||||| | ||||||| || | ||  | ||||||||||||||||||||| ||||  |||    
T  48886067 aatcttattatgattttgaaattaaaggttcatgtagaggctttatattattgcattgtgctccaaccctctacctatggaatccatccaccggatttca 48886166  T
Q  721 caaacaaatacctttgtctcct 742  Q
    ||||||||||||||||| ||||    
T  48886167 caaacaaatacctttgtgtcct 48886188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 33265992 - 33266099
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||    |||| ||  ||||||||| |||||||||| |||||||| ||     
T  33265992 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaagaacgaatttgaga 33266091  T
Q  101 tattagtc 108  Q
    ||||||||    
T  33266092 tattagtc 33266099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 41761781 - 41761867
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 105  Q
    |||||||| ||| |||||||||||||||||||||    | |||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  41761781 aaattcagggactaaatagatatttcgcaaaatttcgggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtatta 41761867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 363 - 481
Target Start/End: Complemental strand, 45366713 - 45366595
Alignment:
Q  363 cctcatgatttgatcatccaaatactgctaatgttactggtgaattttcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctctcatg 462  Q
    |||||||| ||||| |||||||| || |||| |||||  ||||| | |||||| |||||||| ||||||||||||| |||||||||||| ||||||| ||    
T  45366713 cctcatgaattgatgatccaaatcctactaaggttaccagtgaagtctcttatacgtttcaagtgcgtttgtaagtattggttttctcttatctctcgtg 45366614  T
Q  463 ataccgagtttgcaaattc 481  Q
    || |  | |||||||||||    
T  45366613 attcacactttgcaaattc 45366595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 340 - 481
Target Start/End: Complemental strand, 48735833 - 48735689
Alignment:
Q  340 agaagaagaatccattg---tttctacctcatgatttgatcatccaaatactgctaatgttactggtgaattttcttattcgtttcaaatgcgtttgtaa 436  Q
    |||||||||||||| ||   ||||| |||||||| |||||  | ||||| || || | ||||| |||||| | |||||||||||||||||| ||||||||    
T  48735833 agaagaagaatccactgccgtttctgcctcatgagttgatagttcaaattcttctgaggttaccggtgaagtctcttattcgtttcaaatgtgtttgtaa 48735734  T
Q  437 gttttggttttctctaatctctcatgataccgagtttgcaaattc 481  Q
    || |||||||||||| |||||   |||||| || |||||||||||    
T  48735733 gtcttggttttctcttatctcctgtgatactgattttgcaaattc 48735689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 640 - 742
Target Start/End: Original strand, 48875704 - 48875806
Alignment:
Q  640 aattaaaggttcgtgtagagggtttatacttttgcattctggtgcatgcttctacctatggaatccatccatcggacatcacaaacaaatacctttgtct 739  Q
    |||||||||||| || ||||| |||||||| ||||||| |  | || || ||||||||||||||||||||| ||||  |||||||||||||||| |||||    
T  48875704 aattaaaggttcttgcagaggctttatactgttgcattgtttttcaagcctctacctatggaatccatccaccggatttcacaaacaaatacctatgtct 48875803  T
Q  740 cct 742  Q
    |||    
T  48875804 cct 48875806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 41781628 - 41781539
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| ||||| |||||| ||||||||||  | | ||||||||||||||||||||||||||| || ||||| |||||||||||    
T  41781628 aaattcagggactaaataaatattttgcaaaattcagggacaaatttgaccgattttttaaaattcaagaacaaatttgaggtattagtc 41781539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 43519513 - 43519424
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | ||||||||||||||||||  | |||| ||| ||||||||| ||||||||||||||||||| |||||||||||    
T  43519513 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43519424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 641 - 749
Target Start/End: Original strand, 48891271 - 48891379
Alignment:
Q  641 attaaaggttcgtgtagagggtttatacttttgcattctggtgcatgcttctacctatggaatccatccatcggacatcacaaacaaatacctttgtctc 740  Q
    ||||||| ||| |||||||||||| ||||||||||| ||    ||  | ||||  |||||||||||||||  |||| |||||||||||||||||||||||    
T  48891271 attaaagcttcatgtagagggtttgtacttttgcatactaactcaaacatctatgtatggaatccatccactggacttcacaaacaaatacctttgtctc 48891370  T
Q  741 ctattgatt 749  Q
    |||||||||    
T  48891371 ctattgatt 48891379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 833330 - 833223
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| |  | ||||||||| | ||||||  | |||| ||| ||||||||| ||||||||||||| | ||| |||    
T  833330 atttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgagg 833231  T
Q  101 tattagtc 108  Q
    ||||||||    
T  833230 tattagtc 833223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 5439629 - 5439736
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| |  | ||||||||| | ||||||  | |||| ||| ||||||||| ||||||||||||| | ||| |||    
T  5439629 atttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgagg 5439728  T
Q  101 tattagtc 108  Q
    ||||||||    
T  5439729 tattagtc 5439736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 353 - 464
Target Start/End: Original strand, 33133613 - 33133724
Alignment:
Q  353 attgtttctacctcatgatttgatcatccaaatactgctaatgttactggtgaattttcttattcgtttcaaatgcgtttgtaagttttggttttctcta 452  Q
    ||||| ||| |||||||| ||||||||||  || ||||||| |||||   |||| | ||||||||||||||||| | |||||||| |||||||||||||     
T  33133613 attgtatctgcctcatgaattgatcatccttattctgctaaggttaccaatgaagtctcttattcgtttcaaattcatttgtaagctttggttttctctt 33133712  T
Q  453 atctctcatgat 464  Q
    |||||| |||||    
T  33133713 atctctaatgat 33133724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 20820092 - 20819986
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||||||||||||| |||||||| ||| ||||| |||||| |||||||| |      |||||||| ||||||| |||||||||||||||| || |||    
T  20820092 atttgattgacattttgaaaattcagggactaaataaatattttgcaaaatttaggaataaatttgactgatttttgaaaattcaaggacgaagttgagg 20819993  T
Q  101 tattagt 107  Q
    |||||||    
T  20819992 tattagt 20819986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 759 - 813
Target Start/End: Complemental strand, 45384957 - 45384903
Alignment:
Q  759 atttatatggttttgggtatgatcactcaacaaatgattatttagtggtttcaat 813  Q
    |||| |||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  45384957 atttctatggttttgggtatgatcagtcaacaaatgattatttggtggtttcaat 45384903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 640 - 749
Target Start/End: Complemental strand, 50251007 - 50250898
Alignment:
Q  640 aattaaaggttcgtgtagagggtttatacttttgcattctggtgcatgcttctacctatggaatccatccatcggacatcacaaacaaatacctttgtct 739  Q
    |||||||||||| |||||||| |||||| |||| || | |  | || || ||||||||||||||||||||| ||| | ||||| ||||||||||||||||    
T  50251007 aattaaaggttcatgtagaggatttatatttttccactgtttttcaagcctctacctatggaatccatccaccgggcttcacatacaaatacctttgtct 50250908  T
Q  740 cctattgatt 749  Q
    | | ||||||    
T  50250907 cattttgatt 50250898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 401 - 457
Target Start/End: Original strand, 48870166 - 48870222
Alignment:
Q  401 ggtgaattttcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctc 457  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  48870166 ggtgaattctcttattcgtttcaaatgcgtttgtaagtcttggttttttcttatctc 48870222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 401 - 457
Target Start/End: Original strand, 48885852 - 48885908
Alignment:
Q  401 ggtgaattttcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctc 457  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  48885852 ggtgaattctcttattcgtttcaaatgcgtttgtaagtcttggttttttcttatctc 48885908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 5437918 - 5437811
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| |  | ||||||||| | ||||||  | |||| ||  ||||||||| ||||||||||||| | ||| |||    
T  5437918 atttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaaggactattttgagg 5437819  T
Q  101 tattagtc 108  Q
    ||||||||    
T  5437818 tattagtc 5437811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 620 - 743
Target Start/End: Complemental strand, 45372306 - 45372183
Alignment:
Q  620 caatcttatttcgatattggaattaaaggttcgtgtagagggtttatacttttgcattctggtgcatgcttctacctatggaatccatccatcggacatc 719  Q
    |||||| |||| ||| ||| |||||||||||| ||||||||||||||| ||||||||  |  | ||  |||||| ||||||||||||||||  ||   ||    
T  45372306 caatctcattttgatcttgaaattaaaggttcatgtagagggtttatatttttgcatggtaattcaaccttctatctatggaatccatccactggtgttc 45372207  T
Q  720 acaaacaaatacctttgtctccta 743  Q
    | |||||||||||||| |||||||    
T  45372206 agaaacaaatacctttttctccta 45372183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 648 - 747
Target Start/End: Complemental strand, 48170789 - 48170690
Alignment:
Q  648 gttcgtgtagagggtttatacttttgcattctggtgcatgcttctacctatggaatccatccatcggacatcacaaacaaatacctttgtctcctattga 747  Q
    |||| |||||||| |||||| ||||||||  |  | || | |||||||||||||||||||||| | ||  ||| ||||||||||||||||||||||||||    
T  48170789 gttcctgtagaggctttatatttttgcatcataattcaagtttctacctatggaatccatccacccgagttcataaacaaatacctttgtctcctattga 48170690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 692 - 811
Target Start/End: Complemental strand, 49041320 - 49041201
Alignment:
Q  692 tacctatggaatccatccatcggacatcacaaacaaatacctttgtctcctattgattatatttttaatttatatggttttgggtatgatcactcaacaa 791  Q
    ||||||||||| ||||||| ||||  |||||||| |||||||||| |||||| | || ||   || ||||| |||||||||||||||||||  ||||||     
T  49041320 tacctatggaacccatccaccggagctcacaaactaatacctttgcctcctaatcatgattacttaaatttctatggttttgggtatgatccgtcaacag 49041221  T
Q  792 atgattatttagtggtttca 811  Q
    ||||||| ||  ||||||||    
T  49041220 atgattacttgatggtttca 49041201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 481
Target Start/End: Complemental strand, 33134318 - 33134200
Alignment:
Q  363 cctcatgatttgatcatccaaatactgctaatgttactggtgaattttcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctctcatg 462  Q
    |||||||| ||||||||||  || ||| | |  |||| |||||| | ||||||||||||||||||||||||||||  ||| |||||||| |||||| |||    
T  33134318 cctcatgaattgatcatccttattctgttgagattaccggtgaagtctcttattcgtttcaaatgcgtttgtaagccttgattttctcttatctctaatg 33134219  T
Q  463 ataccgagtttgcaaattc 481  Q
    || |  | |||||||||||    
T  33134218 atcctcactttgcaaattc 33134200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 410 - 464
Target Start/End: Complemental strand, 48148130 - 48148076
Alignment:
Q  410 tcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctctcatgat 464  Q
    |||||||||||||||||| || ||||||| |||||||||||| ||||||||||||    
T  48148130 tcttattcgtttcaaatgtgtctgtaagtcttggttttctcttatctctcatgat 48148076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 695 - 749
Target Start/End: Original strand, 48852576 - 48852630
Alignment:
Q  695 ctatggaatccatccatcggacatcacaaacaaatacctttgtctcctattgatt 749  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||| |||||||    
T  48852576 ctatggaatccatccaccggagttcacaaacaaatacctttgtctcccattgatt 48852630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 35404480 - 35404569
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||  ||||| ||||||||||||||| || | |||||||  |||||||||||||||||||| | |||| | |||||||||||    
T  35404480 aaattcagggattaaataaatatttcgcaaaattgaaggacgaatttagccgattttttaaaattcaagtatgaatctgaggtattagtc 35404569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 690 - 811
Target Start/End: Original strand, 48863137 - 48863258
Alignment:
Q  690 tctacctatggaatccatccatcggacatcacaaacaaatacctttgtctcctattgattatatttttaatttatatggttttgggtatgatcactcaac 789  Q
    ||||||||||||||||||||| ||||  ||| ||||||||||||| | |||||| |||||||  ||| |||||    ||||||||||||||||  |||      
T  48863137 tctacctatggaatccatccaccggagctcagaaacaaataccttcgcctcctaatgattattatttaaatttcgccggttttgggtatgatccgtcaga 48863236  T
Q  790 aaatgattatttagtggtttca 811  Q
    | ||||||| || |||||||||    
T  48863237 agatgattacttggtggtttca 48863258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 54387864 - 54387971
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaagg--cgaatttgaccgattttttaaaattcaaggacgaatttaa 98  Q
    ||||||| ||||||||||||||||   ||| |||||||||||||||||||||   |||  | |||||| | ||||||| |||||| ||||||||||||||    
T  54387864 atttgatggacattttgtaaattcgaggactaaatagatatttcgcaaaatt---aggaactaatttggctgatttttaaaaatttaaggacgaatttaa 54387960  T
Q  99 ggtattagtct 109  Q
    | |||| ||||    
T  54387961 gatattggtct 54387971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 363 - 458
Target Start/End: Original strand, 7877306 - 7877401
Alignment:
Q  363 cctcatgatttgatcatccaaatactgctaatgttactggtgaattttcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctct 458  Q
    |||||||| ||||| |||||||| ||| |   ||| |||||||| | |||||| |||||||||||| |||||||| | ||||||||||| ||||||    
T  7877306 cctcatgaattgattatccaaatcctgatttggttgctggtgaagtctcttatacgtttcaaatgcatttgtaagctatggttttctcttatctct 7877401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 363 - 458
Target Start/End: Complemental strand, 45372549 - 45372454
Alignment:
Q  363 cctcatgatttgatcatccaaatactgctaatgttactggtgaattttcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctct 458  Q
    |||||||| ||||| || ||||| || |||| ||| | |||||| | |||||| ||||||||||| |||||||||| |||||||||| | ||||||    
T  45372549 cctcatgaattgatgattcaaattctactaaggttgccggtgaagtctcttatacgtttcaaatgtgtttgtaagtcttggttttctattatctct 45372454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 762 - 813
Target Start/End: Complemental strand, 50250867 - 50250816
Alignment:
Q  762 tatatggttttgggtatgatcactcaacaaatgattatttagtggtttcaat 813  Q
    ||||||||||||| ||||| ||||||||| |||||||||| |||||||||||    
T  50250867 tatatggttttggttatgaccactcaacagatgattatttggtggtttcaat 50250816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2691480 - 2691394
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaag 87  Q
    ||||||||||||||||  |||||||| ||| |||||||||||| ||||||||    | |||||||| | ||||||| ||||||||||    
T  2691480 atttgattgacattttaaaaattcagggactaaatagatattttgcaaaatttgtggacgaatttggctgatttttgaaaattcaag 2691394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 401 - 458
Target Start/End: Original strand, 7771028 - 7771085
Alignment:
Q  401 ggtgaattttcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctct 458  Q
    |||||| | ||||||  ||||||||||||||||||||| |||||||||||| ||||||    
T  7771028 ggtgaagtctcttatatgtttcaaatgcgtttgtaagtcttggttttctcttatctct 7771085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 48813876 - 48813787
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    ||||||||  || ||||| |||||| ||||||||||  |   |||||| | ||||||| ||||||||||||||||||| |||||||||||    
T  48813876 aaattcaggaactaaatatatattttgcaaaattcagggataaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 48813787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 410 - 451
Target Start/End: Original strand, 48891042 - 48891083
Alignment:
Q  410 tcttattcgtttcaaatgcgtttgtaagttttggttttctct 451  Q
    |||||| |||||||||||||||||||||| ||||||||||||    
T  48891042 tcttatacgtttcaaatgcgtttgtaagtcttggttttctct 48891083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 410 - 458
Target Start/End: Original strand, 7904665 - 7904713
Alignment:
Q  410 tcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctct 458  Q
    |||||| ||||||||||| ||||||||||| ||||||||||| ||||||    
T  7904665 tcttatacgtttcaaatgtgtttgtaagttatggttttctcttatctct 7904713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 417 - 481
Target Start/End: Complemental strand, 48171027 - 48170963
Alignment:
Q  417 cgtttcaaatgcgtttgtaagttttggttttctctaatctctcatgataccgagtttgcaaattc 481  Q
    ||||||||||| |||||||||| ||||||| |||| |||||||||||| |  | |||||||||||    
T  48171027 cgtttcaaatgtgtttgtaagtcttggtttgctcttatctctcatgatcctcactttgcaaattc 48170963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 761 - 809
Target Start/End: Original strand, 48870536 - 48870584
Alignment:
Q  761 ttatatggttttgggtatgatcactcaacaaatgattatttagtggttt 809  Q
    ||||||||||||||||||||||| | |||| ||||||| ||||||||||    
T  48870536 ttatatggttttgggtatgatcagttaacagatgattacttagtggttt 48870584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 761 - 809
Target Start/End: Original strand, 48886222 - 48886270
Alignment:
Q  761 ttatatggttttgggtatgatcactcaacaaatgattatttagtggttt 809  Q
    ||||||||||||||||||||||| | |||| ||||||| ||||||||||    
T  48886222 ttatatggttttgggtatgatcagttaacagatgattacttagtggttt 48886270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 359 - 451
Target Start/End: Original strand, 48902532 - 48902624
Alignment:
Q  359 tctacctcatgatttgatcatccaaatactgctaatgttactggtgaattttcttattcgtttcaaatgcgtttgtaagttttggttttctct 451  Q
    |||||||||||| ||||||||||||||  |||    ||| | ||| || | ||| |||||||||||||| |||||||||| ||||||||||||    
T  48902532 tctacctcatgaattgatcatccaaattttgcagtggttgccggtaaagtctctcattcgtttcaaatgtgtttgtaagtcttggttttctct 48902624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 410 - 458
Target Start/End: Complemental strand, 49041583 - 49041535
Alignment:
Q  410 tcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctct 458  Q
    ||||||| |||||||||||||||| |||| |||||||||||| ||||||    
T  49041583 tcttatttgtttcaaatgcgtttgcaagtcttggttttctcttatctct 49041535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 835024 - 835131
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||||||| |||||||||||||| ||| |  | ||||||||| | ||||||  | | || |||  |||||||| ||||||||||||| | ||| |||    
T  835024 atttgattgacgttttgtaaattcagggactattttgatatttcgaataattcagggacaaaattggtcgatttttcaaaattcaaggactattttgagg 835123  T
Q  101 tattagtc 108  Q
    ||||||||    
T  835124 tattagtc 835131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 354 - 449
Target Start/End: Original strand, 7789666 - 7789761
Alignment:
Q  354 ttgtttctacctcatgatttgatcatccaaatactgctaatgttactggtgaattttcttattcgtttcaaatgcgtttgtaagttttggttttct 449  Q
    |||| ||| ||||||||  |||| |||||||| ||| | | ||| | |||||| | ||||||  ||||||||||||||||||||| ||||||||||    
T  7789666 ttgtatctgcctcatgaactgataatccaaattctgatgaggttgccggtgaagtctcttatatgtttcaaatgcgtttgtaagtcttggttttct 7789761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 457
Target Start/End: Original strand, 48875483 - 48875526
Alignment:
Q  414 attcgtttcaaatgcgtttgtaagttttggttttctctaatctc 457  Q
    |||||||||||||||||||| |||| |||||||||||| |||||    
T  48875483 attcgtttcaaatgcgtttgcaagtcttggttttctctcatctc 48875526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 395 - 457
Target Start/End: Complemental strand, 48156887 - 48156825
Alignment:
Q  395 gttactggtgaattttcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctc 457  Q
    ||||| |||||| | |||| | |||||||| ||||||||||||| |||||||||||| |||||    
T  48156887 gttaccggtgaagtctcttctacgtttcaagtgcgtttgtaagtcttggttttctcttatctc 48156825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 762 - 824
Target Start/End: Complemental strand, 48170648 - 48170586
Alignment:
Q  762 tatatggttttgggtatgatcactcaacaaatgattatttagtggtttcaatttcccgtgatc 824  Q
    |||||||||||||||||||||| | || | ||||||| |||||||||||| | ||| ||||||    
T  48170648 tatatggttttgggtatgatcagttaagagatgattacttagtggtttcagtgtcctgtgatc 48170586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 48646782 - 48646852
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaagga 89  Q
    |||||||| ||| ||||||||||||||| |||||||| | |||||||  | || |||| ||||||||||||    
T  48646782 aaattcagggactaaatagatatttcgctaaattcaaggacgaatttagctgacttttgaaaattcaagga 48646852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 343 - 460
Target Start/End: Complemental strand, 49049109 - 49048994
Alignment:
Q  343 agaagaatccattgtttctacctcatgatttgatcatccaaatactgctaatgttactggtgaattttcttattcgtttcaaatgcgtttgtaagttttg 442  Q
    ||||||||||| | | ||| |||||||| ||||| |||| ||| ||||  | ||| |||||||  | |||| | |||||||| || ||||||||||| ||    
T  49049109 agaagaatccactttatctgcctcatgacttgattatcctaattctgc--aggttgctggtgatgtctcttttacgtttcaagtgtgtttgtaagttatg 49049012  T
Q  443 gttttctctaatctctca 460  Q
    ||||||||| ||||||||    
T  49049011 gttttctcttatctctca 49048994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 7149615 - 7149542
Alignment:
Q  32 aaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 105  Q
    ||||| ||||||||||||||| ||||  ||||| | | ||||||| |||||||||||| |||||| | ||||||    
T  7149615 aaataaatatttcgcaaaatttaaagatgaattcggctgatttttgaaaattcaaggatgaattttatgtatta 7149542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 673
Target Start/End: Original strand, 7771265 - 7771298
Alignment:
Q  640 aattaaaggttcgtgtagagggtttatacttttg 673  Q
    ||||| ||||||||||||||||||||||||||||    
T  7771265 aattagaggttcgtgtagagggtttatacttttg 7771298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 673
Target Start/End: Complemental strand, 7774043 - 7774010
Alignment:
Q  640 aattaaaggttcgtgtagagggtttatacttttg 673  Q
    ||||| ||||||||||||||||||||||||||||    
T  7774043 aattagaggttcgtgtagagggtttatacttttg 7774010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 401 - 458
Target Start/End: Complemental strand, 7774283 - 7774226
Alignment:
Q  401 ggtgaattttcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctct 458  Q
    |||||| | |||||||| ||||||||| ||||||||| | ||||||||||| ||||||    
T  7774283 ggtgaagtctcttattcatttcaaatgtgtttgtaagctatggttttctcttatctct 7774226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 673
Target Start/End: Original strand, 7789950 - 7789983
Alignment:
Q  640 aattaaaggttcgtgtagagggtttatacttttg 673  Q
    ||||| ||||||||||||||||||||||||||||    
T  7789950 aattagaggttcgtgtagagggtttatacttttg 7789983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 673
Target Start/End: Original strand, 7904894 - 7904927
Alignment:
Q  640 aattaaaggttcgtgtagagggtttatacttttg 673  Q
    ||||| ||||||||||||||||||||||||||||    
T  7904894 aattagaggttcgtgtagagggtttatacttttg 7904927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 7e-33; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 3011962 - 3011858
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    |||||||||| |||||||||||||| |||||||||||| |||    
T  3011962 atttgattgacattttgtaaattcagagactaaatagatatttcgcaaaattcaggaacgaatttgactgattttttaaaatttaaggacgaatttgagg 3011863  T
Q  101 tatta 105  Q
    |||||    
T  3011862 tatta 3011858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31236926 - 31236819
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||| |||||||||||||||  || |||||||||||||||||||||||  | | |||||||||||||||||||||||||||||||||||| |||    
T  31236926 atttgattgatattttgtaaattcaggaactaaatagatatttcgcaaaattcagggacaaatttgaccgattttttaaaattcaaggacgaatttgagg 31236827  T
Q  101 tattagtc 108  Q
    ||||||||    
T  31236826 tattagtc 31236819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 2871058 - 2871166
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||  | |||||||  ||||||||| ||||||||||||||||||| ||     
T  2871058 atttgattgacattttgtaaattcaaagacaaaatagctatttcgcaaaattcagggacgaatttagccgatttttaaaaattcaaggacgaatttgaga 2871157  T
Q  101 tattagtct 109  Q
    |||||||||    
T  2871158 tattagtct 2871166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26223694 - 26223587
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||||||||||||| ||||||||||||||||||| |||    
T  26223694 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgagg 26223595  T
Q  101 tattagtc 108  Q
    ||||||||    
T  26223594 tattagtc 26223587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 8168049 - 8167941
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||||||||||||||| |||||| ||| || | |||||||||||||||||| || |||| ||| ||||||||| ||||||||||||||||||| |||    
T  8168049 atttgattgacattttgtacattcagggactaatttgatatttcgcaaaattcagagacgaaattggccgatttttcaaaattcaaggacgaatttgagg 8167950  T
Q  101 tattagtct 109  Q
    |||||||||    
T  8167949 tattagtct 8167941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 51894674 - 51894570
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| ||||| ||||||||||||||||| || | ||||||||| ||||||||||||||||| |||||||| | |    
T  51894674 atttgattgacattttgtaaattcagggactaaatatatatttcgcaaaattcagagacaaatttgacccattttttaaaattcaagaacgaatttgatg 51894575  T
Q  101 tatta 105  Q
    |||||    
T  51894574 tatta 51894570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 25276849 - 25276742
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||| |  ||| ||| ||||||||| ||||||||||||||||||| |||    
T  25276849 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgagg 25276750  T
Q  101 tattagtc 108  Q
    ||||||||    
T  25276749 tattagtc 25276742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 33599325 - 33599230
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaattt 96  Q
    |||||||||||||||||||||||||||||  || | ||||||||||||||||||  | |||||||||||||||||| |||||||||||||||||||    
T  33599325 atttgattgacattttgtaaattcagagattaatttgatatttcgcaaaattcatggacgaatttgaccgatttttcaaaattcaaggacgaattt 33599230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 37088118 - 37088225
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||||||||||||||||||| |  |||||||||| ||||||||||||||||    |||||||| |||||||||||||||||||||| |||||| |||    
T  37088118 atttgattgacattttgtaaatttaaggacaaaatagctatttcgcaaaattcaggaacgaatttggccgattttttaaaattcaaggaagaatttgagg 37088217  T
Q  101 tattagtc 108  Q
    ||||||||    
T  37088218 tattagtc 37088225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 2869668 - 2869578
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    ||||| |||||| |||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  2869668 aaatttagagactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtct 2869578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 50554270 - 50554164
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||||||||||||| ||||||||  || |||||| |||||  |||||||||  | |||||||||||||||||||||||||||||||||||||| |||    
T  50554270 atttgattgacattttgcaaattcaggaactaaatagctattttacaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgagg 50554171  T
Q  101 tattagt 107  Q
    |||||||    
T  50554170 tattagt 50554164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 37344431 - 37344342
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    ||||||| |||| |||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37344431 aaattcaaagactaaataggtatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 37344342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 46582117 - 46582009
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||| ||||||||| ||||||||||||| ||||| |||    
T  46582117 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacaaatttgagg 46582018  T
Q  101 tattagtct 109  Q
    |||||||||    
T  46582017 tattagtct 46582009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 3013511 - 3013600
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||||||||||||  | |||||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  3013511 aaattcagggactaaatagatatttcgcaaaattcatggacgaatttgactgatgttttaaaattcaaggacgaatttgaggtattagtc 3013600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 25278403 - 25278492
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||  ||| |||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25278403 aaattcaaggactaaataggtatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 25278492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 27087372 - 27087283
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||| |||||||||||    
T  27087372 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttgaccgattttttaaaatttaaggacgaatttgaggtattagtc 27087283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 8169550 - 8169657
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||| | ||||||||  | |||| ||| ||||||||| ||||||||||||||||||| |||    
T  8169550 atttgattgacattttgtaaattcagggactaatttgatattttgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgagg 8169649  T
Q  101 tattagtc 108  Q
    ||||||||    
T  8169650 tattagtc 8169657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 9120146 - 9120039
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||| ||||||||  | |||| ||||||||||||| ||||||||||||| | ||| |||    
T  9120146 atttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgagg 9120047  T
Q  101 tattagtc 108  Q
    ||||||||    
T  9120046 tattagtc 9120039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 27089261 - 27089368
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||  || | |||||||| |||||||||| | |||| ||  ||||||||| ||||||||||||||||||| |||    
T  27089261 atttgattgacattttgtaaattcagggattaatttgatatttcacaaaattcaaggacgaaatttgccgatttttcaaaattcaaggacgaatttgagg 27089360  T
Q  101 tattagtc 108  Q
    ||||||||    
T  27089361 tattagtc 27089368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 37345944 - 37346051
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  |  ||| |||  |||||||| ||||||||||||||||||| |||    
T  37345944 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaaggacgaatttgagg 37346043  T
Q  101 tattagtc 108  Q
    ||||||||    
T  37346044 tattagtc 37346051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 50556132 - 50556222
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    ||||| || ||| ||||||||||||||||||||||| || |||||||||| ||||||||||||||||| ||||||||| || |||||||||    
T  50556132 aaatttagggactaaatagatatttcgcaaaattcagagacgaatttgactgattttttaaaattcaaagacgaatttgagatattagtct 50556222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 31238530 - 31238619
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||||||||||||  | | |||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  31238530 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgattttttaaaattcaaggacaaatttgaggtattagtc 31238619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 34776673 - 34776569
Alignment:
Q  4 tgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtat 103  Q
    ||||||| ||||||||||||||| ||| || | ||||||||| ||||||||  | |||| ||| ||||||||| ||||||||||||||||||| ||||||    
T  34776673 tgattgaaattttgtaaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtat 34776574  T
Q  104 tagtc 108  Q
    |||||    
T  34776573 tagtc 34776569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4854517 - 4854410
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||| ||||||||||||||| ||| || | ||| ||||||||||||||  | |||| |||| |||||||| ||||||||||||||||||| | |    
T  4854517 atttgattgaaattttgtaaattcagggactaatttgatctttcgcaaaattcagggacgaaattgaacgatttttcaaaattcaaggacgaatttgaag 4854418  T
Q  101 tattagtc 108  Q
    ||||||||    
T  4854417 tattagtc 4854410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 34778173 - 34778263
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    |||||||| ||| || | ||||||||||||||||||  | || ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  34778173 aaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtct 34778263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 4856001 - 4856090
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | ||||||||||||||||||  | || ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  4856001 aaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 4856090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 52641995 - 52641887
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||  ||||||||||||||    ||| ||||| |||||||||||||||||  | |||||||| | ||||||| ||||||||||||||||||| |||    
T  52641995 atttgatgaacattttgtaaatttgaggactaaatatatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgagg 52641896  T
Q  101 tattagtct 109  Q
    |||||||||    
T  52641895 tattagtct 52641887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 6816933 - 6816866
Alignment:
Q  40 atttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagt 107  Q
    |||| ||||||||||  | |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6816933 attttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 6816866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 6818713 - 6818802
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||| || |||| ||  | ||| |||| ||||||||||||||||||||||||||||| |||||||||||    
T  6818713 aaattcagggactaaatagatattttgctaaatccagggacgagtttggccgattttttaaaattcaaggacgaatttgaggtattagtc 6818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 25278988 - 25279077
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| ||||||||||||||||||||| |    |||||||| | ||||||| ||||||||||||||||||| |||||||||||    
T  25278988 aaattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 25279077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 46583591 - 46583680
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | ||||||||||||||||||  | | || ||||||||||||| ||||||||||||||||||| |||||||||||    
T  46583591 aaattcagggactaatttgatatttcgcaaaattcagggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 46583680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 47011561 - 47011456
Alignment:
Q  3 ttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggta 102  Q
    ||||||||| |||||||||||||| ||| || | ||||||||| ||||||||  | |||| ||| ||||||||| ||||||||||||| | ||| |||||    
T  47011561 ttgattgactttttgtaaattcagggactaatttgatatttcgaaaaattcatggacgaaattgtccgatttttcaaaattcaaggactattttgaggta 47011462  T
Q  103 ttagtc 108  Q
    ||||||    
T  47011461 ttagtc 47011456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 51896187 - 51896276
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||||||||||||  | | |||||||| |||||||||||||| ||||||| |||| |||||| ||||    
T  51896187 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttgactgattttttaaaatttaaggacggatttgaggtatcagtc 51896276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 25278930 - 25278854
Alignment:
Q  32 aaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||||||||||||||||||  | | |||||||| ||||||| |||||||||||| |||||| |||||||||||    
T  25278930 aaatagatatttcgcaaaattcagggacaaatttgactgatttttgaaaattcaaggatgaatttgaggtattagtc 25278854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 390 - 457
Target Start/End: Original strand, 24322075 - 24322142
Alignment:
Q  390 ctaatgttactggtgaattttcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctc 457  Q
    |||| ||| |||||||| | ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  24322075 ctaaggttgctggtgaagtctcttattcgtttcaaatgcgtttgtaagtcttggttttctcttatctc 24322142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 109
Target Start/End: Complemental strand, 33599249 - 33599186
Alignment:
Q  46 caaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    |||||||||| | |||||||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  33599249 caaaattcaaggacgaatttgcccgatttttcaaaattcaaggacgaatttgaggtattagtct 33599186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 33602679 - 33602765
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 105  Q
    |||||||| ||| || | |||||||| |||||||||  | |||| ||||||||||||| ||||||||||||||||||| ||||||||    
T  33602679 aaattcagggactaatttgatatttcacaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 33602765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 52643650 - 52643736
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 105  Q
    |||||||| ||| ||||| |||||||||||||||||  | ||||||| || ||||||| |||||| |||||||||||| ||||||||    
T  52643650 aaattcagggactaaataaatatttcgcaaaattcagggacgaatttaactgatttttaaaaatttaaggacgaatttgaggtatta 52643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 1444163 - 1444271
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||| | ||||||||  | | || ||| ||||||||| |||||| |||||| | ||| |||    
T  1444163 atttgattgacattttgtaaattcagggactaatttgatattttgaaaaattcagggacaaaattggccgatttttcaaaatttaaggactattttgagg 1444262  T
Q  101 tattagtct 109  Q
    |||||||||    
T  1444263 tattagtct 1444271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 45044998 - 45044949
Alignment:
Q  59 cgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||| |||| |||||||||||||||||||||||||| |||||||||||    
T  45044998 cgaattggaccaattttttaaaattcaaggacgaatttgaggtattagtc 45044949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 410 - 458
Target Start/End: Original strand, 24309810 - 24309858
Alignment:
Q  410 tcttattcgtttcaaatgcgtttgtaagttttggttttctctaatctct 458  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  24309810 tcttattcgtttcaaatccgtttgtaagttatggttttctcttatctct 24309858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 47013117 - 47013207
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    |||||||| ||| || | ||||||||| ||||||||  | |||| ||| ||||||||| ||||||||||||| | ||| ||||||||||||    
T  47013117 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatttttcaaaattcaaggactattttgaggtattagtct 47013207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 410 - 451
Target Start/End: Original strand, 24415470 - 24415511
Alignment:
Q  410 tcttattcgtttcaaatgcgtttgtaagttttggttttctct 451  Q
    |||||||||||||||||||||| |||||| ||||||||||||    
T  24415470 tcttattcgtttcaaatgcgttcgtaagtcttggttttctct 24415511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 51123541 - 51123590
Alignment:
Q  3 ttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaatt 52  Q
    |||||||||||||| ||||||||| ||| |||| ||||||||||||||||    
T  51123541 ttgattgacattttataaattcagggacgaaattgatatttcgcaaaatt 51123590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 23577743 - 23577635
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||| ||||||||||| |||||||  ||| || | |||||||||||||||| || | |||| ||| ||||||||| |  ||| ||||| |||||| | |    
T  23577743 atttggttgacattttgcaaattcattgactaatttgatatttcgcaaaattgaaggtcgaaattgcccgatttttcaggattgaaggatgaatttgatg 23577644  T
Q  101 tattagtct 109  Q
    |||||||||    
T  23577643 tattagtct 23577635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 9121703 - 9121793
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    |||||||| ||| || | ||||||||| |||||| |  | |||| ||| ||||||||| ||||||||||||| | ||| ||||||||||||    
T  9121703 aaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtct 9121793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 2e-27; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 9400017 - 9400124
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||| ||||||||||||| | ||| || ||||||||||||||||||||| |  ||||||||| ||||||| ||||||||||||||||||| |||    
T  9400017 atttgattgatattttgtaaattcggggactaattagatatttcgcaaaattcaaggatgaatttgactgatttttcaaaattcaaggacgaatttgagg 9400116  T
Q  101 tattagtc 108  Q
    ||||||||    
T  9400117 tattagtc 9400124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 10569901 - 10570009
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||  | |||||||| | ||||||||||||||||||||||||||| |||    
T  10569901 atttgatggacattttgtaaattcgaggactaaatagatattttgcaaaattcatggacgaatttggctgattttttaaaattcaaggacgaatttgagg 10570000  T
Q  101 tattagtct 109  Q
    |||||||||    
T  10570001 tattagtct 10570009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 11357176 - 11357284
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||| ||||||||||||||||||| ||| |||| | |||||  |||||||||  | |||||||||||||||||||||||||||||||||||||| | |    
T  11357176 atttgaatgacattttgtaaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatg 11357275  T
Q  101 tattagtct 109  Q
    |||||||||    
T  11357276 tattagtct 11357284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 18645086 - 18645193
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  ||| || | |||||||||||||||||| || |||| ||| ||||||||| ||||||||||||||||||| |||    
T  18645086 atttgattgacattttgtaaattcatggactaatttgatatttcgcaaaattcagagacgaa-ttgtccgatttttcaaaattcaaggacgaatttgagg 18645184  T
Q  101 tattagtct 109  Q
    |||||||||    
T  18645185 tattagtct 18645193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 32518479 - 32518587
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  |  ||| ||| ||||||||| ||||||||||||||||||| |||    
T  32518479 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttgagg 32518578  T
Q  101 tattagtct 109  Q
    |||||||||    
T  32518579 tattagtct 32518587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 20525316 - 20525423
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||  |||||||||| ||||| ||||||||||  |  |||||||||| |||||| ||||||||| ||||||||| |||    
T  20525316 atttgattgacattttgtaaattcaaggacaaaatagctattttgcaaaattcagggatgaatttgacctatttttaaaaattcaaagacgaatttgagg 20525415  T
Q  101 tattagtc 108  Q
    ||||||||    
T  20525416 tattagtc 20525423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 13613617 - 13613706
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | ||||||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13613617 aaattcagggactaatttgatatttcgcaaaattcagggacgaatttgaccgatttttcaaaattcaaggacgaatttaaggtattagtc 13613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 32439126 - 32439215
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| |||||||||||||||||||||||  | |||||||||||||||||||||||||||| ||| ||||| |||||||||||    
T  32439126 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaatgactaatttgaggtattagtc 32439215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 7371282 - 7371175
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||| ||||||||  |||||||||  ||||||||||||||||  | | |||||| ||||||||| |||||||||||||||| || |||    
T  7371282 atttgattgacattttataaattcaaggacaaaatatctatttcgcaaaattcagggaccaatttggccgatttttgaaaattcaaggacgaagttgagg 7371183  T
Q  101 tattagtc 108  Q
    ||||||||    
T  7371182 tattagtc 7371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 13610796 - 13610690
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||  | ||| || | ||||||||||||||||||  | | ||||||| |||||||| |||||||||||||||||||||||    
T  13610796 atttgattgacattttgtaaattatg-gactaatttgatatttcgcaaaattcagggacaaatttgatcgatttttcaaaattcaaggacgaatttaagg 13610698  T
Q  101 tattagtc 108  Q
    ||||||||    
T  13610697 tattagtc 13610690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 32454355 - 32454248
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||| ||||||||| | |||| ||| ||||||||| ||||||||||||| | ||| |||    
T  32454355 atttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcaaggacgaaattggccgatttttcaaaattcaaggactattttgagg 32454256  T
Q  101 tattagtc 108  Q
    ||||||||    
T  32454255 tattagtc 32454248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 6902880 - 6902987
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||| ||||||||||||||||   ||| ||||||||||| ||||||||| |  | |||||||||| ||||||| ||||||||||||||||||| |||    
T  6902880 atttgatggacattttgtaaattcgaggactaaatagatatt-cgcaaaatttagggacgaatttgactgatttttgaaaattcaaggacgaatttgagg 6902978  T
Q  101 tattagtct 109  Q
    |||||||||    
T  6902979 tattagtct 6902987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 7051258 - 7051334
Alignment:
Q  32 aaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||||||||||   |||||||||||||||||||    
T  7051258 aaatagatatttcgcaaaattcagagacgaatttgactgattttttaaaattcaaattcgaatttaaggtattagtc 7051334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 20523455 - 20523367
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagt 107  Q
    |||||||| ||| |||||||||||||||||||||||| | |||||||||||||||||| ||||||| |||| |||||| | ||||||||    
T  20523455 aaattcagggactaaatagatatttcgcaaaattcaaggacgaatttgaccgatttttgaaaattctaggaagaatttgatgtattagt 20523367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 11355297 - 11355223
Alignment:
Q  33 aatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagt 107  Q
    ||||||||||||  ||||||||  | |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11355297 aatagatatttcataaaattcagtgacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 11355223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 33276905 - 33276816
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaa 93  Q
    |||||||||||||||| |||||||||   | ||||||||||||||||||||| | |  |||||||||| ||||||||||||||||||||||||    
T  33276905 atttgattgacattttataaattcag---ctaaatagatatttcgcaaaatttagaaacgaatttgactgattttttaaaattcaaggacgaa 33276816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 21068732 - 21068628
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    ||||||||||||||||||||||||   ||| |||||||||||||| ||||||    | |||||||||| |||| || ||||||||||||||||||| |||    
T  21068732 atttgattgacattttgtaaattcgaggactaaatagatatttcgtaaaatttgtggacgaatttgactgattgttgaaaattcaaggacgaatttgagg 21068633  T
Q  101 tatta 105  Q
    |||||    
T  21068632 tatta 21068628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 32516953 - 32516877
Alignment:
Q  32 aaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||| ||||| | ||||||||  | |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32516953 aaataggtattttgtaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 32516877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3480639 - 3480746
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| |  | ||||||||| ||||||||  | |||| ||| ||||||||| ||||||||||||| | ||| |||    
T  3480639 atttgattgacattttgtaaattcagggactagtttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgagg 3480738  T
Q  101 tattagtc 108  Q
    ||||||||    
T  3480739 tattagtc 3480746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 6899574 - 6899485
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    ||||| || ||| ||||||||||||| ||||||| | || |||||||||| ||||||| ||||||||||||| ||||| |||||||||||    
T  6899574 aaatttagggactaaatagatatttcacaaaatttagagacgaatttgactgatttttgaaaattcaaggacaaatttgaggtattagtc 6899485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 10568488 - 10568411
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaattt 96  Q
    |||||||| ||| ||||| ||||||||| |||||||| | |||||||||| ||||||| |||||||||||||||||||    
T  10568488 aaattcagggactaaataaatatttcgctaaattcaaggacgaatttgactgatttttgaaaattcaaggacgaattt 10568411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 7372993 - 7373079
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 105  Q
    |||||||| ||| ||||| |||||||||||||||||  | ||||||||||| |||||| |||||||||  |||||||| ||||||||    
T  7372993 aaattcagggactaaataaatatttcgcaaaattcagggacgaatttgaccaatttttaaaaattcaatcacgaatttgaggtatta 7373079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 634 - 743
Target Start/End: Original strand, 21015658 - 21015767
Alignment:
Q  634 tattggaattaaaggttcgtgtagagggtttatacttttgcattctggtgcatgcttctacctatggaatccatccatcggacatcacaaacaaatacct 733  Q
    ||||| || |||| |||| ||||||||||||||| |||||||   || | ||  | |||||||||||||||||||||   ||  ||||||||||||||||    
T  21015658 tattgaaactaaatgttcatgtagagggtttatatttttgcaccatgattcaaacatctacctatggaatccatccactagagttcacaaacaaatacct 21015757  T
Q  734 ttgtctccta 743  Q
    ||||||||||    
T  21015758 ttgtctccta 21015767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 32455926 - 32456015
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | ||||||||| ||||||||  | |||| ||||||||||||| ||||||||||||| | ||| |||||||||||    
T  32455926 aaattcagtgactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 32456015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 21045417 - 21045366
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaatt 52  Q
    |||||||||||||||||||||||| | ||| |||||||||||||| ||||||    
T  21045417 atttgattgacattttgtaaattcggggactaaatagatatttcgtaaaatt 21045366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 8605365 - 8605415
Alignment:
Q  59 cgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtct 109  Q
    |||||||| | ||||||| ||||||||||||||||||| ||||||||||||    
T  8605365 cgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtct 8605415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 32437208 - 32437140
Alignment:
Q  40 atttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||||||||||  | |||| ||| ||||||||| ||||||||| ||| ||||| |||||||||||    
T  32437208 atttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacaaatttgaggtattagtc 32437140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 33267168 - 33267117
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaatt 52  Q
    |||||||||||||||| ||||||| |  || |||||||||||||||||||||    
T  33267168 atttgattgacattttataaattcgggaactaaatagatatttcgcaaaatt 33267117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 61; Significance: 1e-25; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 1537 - 1645
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||| ||||||||||||||||||| ||| |||| | |||||  |||||||||  | |||||||||||||||||||||||||||||||||||||| | |    
T  1537 atttgaatgacattttgtaaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatg 1636  T
Q  101 tattagtct 109  Q
    |||||||||    
T  1637 tattagtct 1645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 60; Significance: 4e-25; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 14325 - 14432
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||||||||||||  | |||| ||  ||||||||| ||||||||||||||||||| |||    
T  14325 atttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgagg 14424  T
Q  101 tattagtc 108  Q
    ||||||||    
T  14425 tattagtc 14432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 3383 - 3294
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | ||||||||||||||||||  | | || ||| ||||||||| ||||||||||||||||||| |||||||||||    
T  3383 aaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 3294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 4555 - 4466
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattagtc 108  Q
    |||||||| ||| || | ||||||||||||||||||  | | || ||| ||||||||| ||||||||||||||||||| |||||||||||    
T  4555 aaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 4466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 56; Significance: 9e-23; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 54240 - 54347
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| || | ||||||||| ||||||||  | |||| ||||||||||||| ||||||||||||| | ||| |||    
T  54240 atttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgagg 54339  T
Q  101 tattagtc 108  Q
    ||||||||    
T  54340 tattagtc 54347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 8351 - 8264
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtattag 106  Q
    |||||||| ||| |||||||||||| |||||||||||   |||||||| || |||||||||||||||||||||||||| |||||||||    
T  8351 aaattcagggactaaatagatattttgcaaaattcaagaacgaatttggccaattttttaaaattcaaggacgaatttgaggtattag 8264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 1352 - 1266
Alignment:
Q  19 aaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 105  Q
    |||||||| ||| |||||||||||||  ||||||||  | ||||||| ||| ||||||||||||||||||||| |||| ||||||||    
T  1352 aaattcagggactaaatagatatttcataaaattcatggacgaatttaaccaattttttaaaattcaaggacggatttgaggtatta 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1089 - 982
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaagg 100  Q
    |||||||||||||||||||||||||| ||| |  | ||||||||| | ||||||  | |||| ||  ||||||||| ||||||||||||| | ||| |||    
T  1089 atttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaaggactattttgagg 990  T
Q  101 tattagtc 108  Q
    ||||||||    
T  989 tattagtc 982  T

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Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 106775 - 106722
Alignment:
Q  1 atttgattgacattttgtaaattcagagacaaaatagatatttcgcaaaattca 54  Q
    |||||||||||||||||||||||| || || |||||||||||||| ||||||||    
T  106775 atttgattgacattttgtaaattcggaaactaaatagatatttcgtaaaattca 106722  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 436343 - 436272
Alignment:
Q  30 caaaatagatatttcgcaaaattcaaaggcgaatttgaccgattttttaaaattcaaggacgaatttaaggt 101  Q
    ||||||||||||||||||||||| |  |  ||||||| | ||||||| |||||||||| |||||||| ||||    
T  436343 caaaatagatatttcgcaaaatttatggatgaatttggctgatttttgaaaattcaagaacgaatttgaggt 436272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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