View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7682_low_13 (Length: 328)
Name: NF7682_low_13
Description: NF7682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7682_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 27332449 - 27332760
Alignment:
| Q |
1 |
agacaccggaacaagccacggtgaggctaaacaaaacaggtctgaaaaagcgtgagctgagtcaaattccggtgactgtgtacggtggttccggagagga |
100 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
27332449 |
agacaccggaacaagccacggtaaggctaaacaaaacaggtctgaaaaagcgtgagctgagtcaaattccggtgactgtgtacggtggtgccggagagga |
27332548 |
T |
|
| Q |
101 |
tattccagtgacggagtgtcctatttgtttaggagagtttgagaaaggggacaaagttcgaatgttgccaaagtgtaatcacgggtttcatgttaggtgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27332549 |
tattccagtgacggagtgtcctatttgtttaggagagtttgagaaaggggacaaagttcgaatgttgccaaagtgtaatcacgggtttcatgttaggtgt |
27332648 |
T |
|
| Q |
201 |
attgacacgtggttggtgtcacattcttcgtgtccaaattgtaggaattcacttcttgttgagagagaatccaaagatggggttgccggagatgggttgc |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
27332649 |
attgacacgtggttggtgtcacattcttcgtgtccaaattgtaggaattcacttcttgttgagggagaatccaaagatggggttgccggagatgggttgc |
27332748 |
T |
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| Q |
301 |
cggaaaatgttg |
312 |
Q |
| |
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|||||||||||| |
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| T |
27332749 |
cggaaaatgttg |
27332760 |
T |
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