View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7683_high_2 (Length: 432)
Name: NF7683_high_2
Description: NF7683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7683_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 17 - 418
Target Start/End: Original strand, 7480675 - 7481083
Alignment:
| Q |
17 |
aagtactttagataattagaaatcaacagggagaggattcaatctttcctctattgaatccttgagggaaaatcatctaggttgataaatttgtaagcta |
116 |
Q |
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| T |
7480675 |
aagtattttagataattagaaatcaatagggagaggattcaatctttcctctattgaatgcttgagtgaaaatcatctaggttgatagatttgtaagcta |
7480774 |
T |
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| Q |
117 |
ctttttataaagatttattgatgatggatcaaagagttggtttttccttgtaattgtacgttaccnnnnnnnggattgaactacatcaac---------- |
206 |
Q |
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| T |
7480775 |
ctttttatgaagatttattgatgatggatcaaagagttggtttttccttgtaattgtacgttacctttttttggattgaactacatcaacaaacatcaac |
7480874 |
T |
|
| Q |
207 |
tttattcttctactatctatctttgtctttggtgtgattgtttggaatttcgtttgcacatcaaaaat-aattgttctaggctgaatctttatctgccaa |
305 |
Q |
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| T |
7480875 |
tttattcttctactatctatctttctctttggtgtgattgtttggaatttcgtttgcacataaaaaaagaattgttctaggctgaatctttatctgccaa |
7480974 |
T |
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| Q |
306 |
gttatttaatttgattgccatcattatttaaattttttaacaaaatgttatgttataaagtttctgtctaatattaattgtgtatgagggacctgtccaa |
405 |
Q |
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| T |
7480975 |
gtcatttaatttgattgctattattatttaaattttttaacaaaatgttatgttataaagtttctgtctaatatt----gtttttaagggacctgtccaa |
7481070 |
T |
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| Q |
406 |
tattcttatttat |
418 |
Q |
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| T |
7481071 |
tattcttatttat |
7481083 |
T |
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