View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7683_low_10 (Length: 249)
Name: NF7683_low_10
Description: NF7683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7683_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 21 - 232
Target Start/End: Complemental strand, 16085505 - 16085294
Alignment:
| Q |
21 |
aaaaagccatattaaaaagatgcagaatatatgagctacaaatgatatcttcataaagaccaaattgaaacaaaacatgcatccaccaacaacagtaaaa |
120 |
Q |
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| T |
16085505 |
aaaaagccatattaaaaagatgcagaatatatgagcttcaaatgatatcttcataaagaccaaattgaaacaaaacatgcatccaccaacaacagtaaaa |
16085406 |
T |
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| Q |
121 |
caagcaataaataaaactgaatgaaactaatactaataaagacatttacatagctcccacgatgatccctagcacttaaactactactaccaatgaaaca |
220 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
16085405 |
caagcaataaataaaactgaatgaaactaatactaataaagacatttacatagctcccatgatgatccctagcacttaaactactactaccaatgaaaca |
16085306 |
T |
|
| Q |
221 |
aaattaagattt |
232 |
Q |
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|||||||||||| |
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| T |
16085305 |
aaattaagattt |
16085294 |
T |
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