View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7685_low_5 (Length: 270)
Name: NF7685_low_5
Description: NF7685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7685_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 19 - 256
Target Start/End: Complemental strand, 38592537 - 38592300
Alignment:
| Q |
19 |
acattttatgactttacaagatcaatatttaaagataaacaaaattttcgtagcgcaaaataaattgtagcataaattgcaaacaatatttcaattgtga |
118 |
Q |
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| T |
38592537 |
acattttatgactttacaagatcaatatttaaagataaacaaaattttcgtagcgcaaaataaattgtagcataaattgcaaacaatatttcaattgtga |
38592438 |
T |
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| Q |
119 |
atcggtggcttccttctagctggagtgtaatccattgaaaatacttcatctcccacattatgttcttcttttgccttaaacatatgatcttcctcattat |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
38592437 |
atcggtggcttccttctagctggagtgtaatccattgaaaatacttcatctcccacattatgttcttcttttgccttaaacatatgatcttccttattat |
38592338 |
T |
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| Q |
219 |
tatgagtattactcgttacatcattgcttttttccttc |
256 |
Q |
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| T |
38592337 |
tatgagtattactcgttacatcattgcttttttccttc |
38592300 |
T |
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