View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7686_high_10 (Length: 273)

Name: NF7686_high_10
Description: NF7686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7686_high_10
NF7686_high_10
[»] scaffold0356 (1 HSPs)
scaffold0356 (13-267)||(17855-18109)
[»] scaffold0134 (1 HSPs)
scaffold0134 (13-267)||(5239-5499)
[»] chr5 (14 HSPs)
chr5 (13-267)||(14192791-14193052)
chr5 (13-267)||(25542772-25543033)
chr5 (22-267)||(17871616-17871868)
chr5 (13-267)||(39883162-39883423)
chr5 (13-267)||(37372915-37373176)
chr5 (13-267)||(8428553-8428814)
chr5 (13-259)||(27881063-27881316)
chr5 (18-267)||(3689961-3690217)
chr5 (18-267)||(3876570-3876826)
chr5 (13-152)||(24629962-24630101)
chr5 (13-152)||(10025042-10025181)
chr5 (13-152)||(30346645-30346784)
chr5 (13-194)||(37261294-37261482)
chr5 (23-56)||(6089199-6089232)
[»] chr4 (8 HSPs)
chr4 (13-267)||(1860656-1860917)
chr4 (13-267)||(49710152-49710412)
chr4 (13-267)||(35855886-35856147)
chr4 (13-267)||(38518075-38518336)
chr4 (13-267)||(49786807-49787068)
chr4 (13-152)||(55559139-55559278)
chr4 (119-267)||(13337320-13337475)
chr4 (202-267)||(618203-618268)
[»] chr2 (11 HSPs)
chr2 (13-267)||(27509353-27509614)
chr2 (21-267)||(24245812-24246065)
chr2 (13-267)||(24269049-24269310)
chr2 (13-267)||(27192468-27192729)
chr2 (13-267)||(27842282-27842543)
chr2 (13-262)||(17683813-17684069)
chr2 (13-267)||(21395349-21395610)
chr2 (13-267)||(41920152-41920413)
chr2 (13-267)||(28666151-28666412)
chr2 (13-207)||(35609664-35609865)
chr2 (13-267)||(37824985-37825246)
[»] scaffold0017 (1 HSPs)
scaffold0017 (13-267)||(186534-186794)
[»] chr3 (13 HSPs)
chr3 (13-267)||(10110579-10110840)
chr3 (13-267)||(10000386-10000647)
chr3 (13-254)||(50410151-50410399)
chr3 (13-257)||(10237535-10237785)
chr3 (13-267)||(52918045-52918305)
chr3 (13-267)||(10968761-10969021)
chr3 (13-267)||(13530018-13530279)
chr3 (13-267)||(32750-33011)
chr3 (13-267)||(11368625-11368888)
chr3 (13-200)||(46913050-46913244)
chr3 (15-243)||(11362239-11362475)
chr3 (17-243)||(10038623-10038846)
chr3 (13-152)||(47692948-47693087)
[»] scaffold1139 (1 HSPs)
scaffold1139 (17-267)||(983-1240)
[»] chr7 (9 HSPs)
chr7 (13-267)||(5828534-5828795)
chr7 (13-267)||(21070041-21070302)
chr7 (13-267)||(7036699-7036960)
chr7 (22-267)||(22843792-22844044)
chr7 (13-267)||(12781127-12781389)
chr7 (13-267)||(9001124-9001385)
chr7 (13-267)||(12785957-12786218)
chr7 (13-152)||(42232063-42232202)
chr7 (156-200)||(18939139-18939183)
[»] chr1 (11 HSPs)
chr1 (13-261)||(36207194-36207449)
chr1 (13-267)||(2453096-2453357)
chr1 (13-262)||(2329148-2329401)
chr1 (13-267)||(16042004-16042265)
chr1 (13-267)||(18148667-18148928)
chr1 (16-267)||(37390131-37390389)
chr1 (13-267)||(6310973-6311235)
chr1 (13-267)||(48775314-48775575)
chr1 (13-200)||(48238523-48238717)
chr1 (13-152)||(52500648-52500787)
chr1 (156-262)||(48233507-48233613)
[»] chr6 (8 HSPs)
chr6 (13-268)||(18344104-18344366)
chr6 (13-267)||(2202158-2202419)
chr6 (13-262)||(10187523-10187779)
chr6 (22-267)||(30881315-30881567)
chr6 (13-268)||(15333622-15333884)
chr6 (15-267)||(29640007-29640266)
chr6 (15-267)||(31510178-31510437)
chr6 (13-152)||(12517367-12517506)
[»] scaffold0262 (1 HSPs)
scaffold0262 (16-262)||(18988-19241)
[»] chr8 (6 HSPs)
chr8 (13-267)||(25218544-25218805)
chr8 (13-267)||(21113723-21113984)
chr8 (13-267)||(30307156-30307417)
chr8 (13-267)||(7821817-7822078)
chr8 (13-240)||(31978533-31978767)
chr8 (13-267)||(25209026-25209272)
[»] scaffold0073 (2 HSPs)
scaffold0073 (13-267)||(31912-32172)
scaffold0073 (13-240)||(19436-19670)
[»] scaffold0002 (1 HSPs)
scaffold0002 (13-267)||(321315-321576)
[»] scaffold0550 (1 HSPs)
scaffold0550 (13-262)||(556-812)
[»] scaffold0090 (1 HSPs)
scaffold0090 (13-267)||(48915-49176)
[»] scaffold0003 (2 HSPs)
scaffold0003 (17-267)||(182794-183051)
scaffold0003 (15-243)||(165511-165747)
[»] scaffold0025 (1 HSPs)
scaffold0025 (13-232)||(16663-16889)
[»] scaffold0118 (1 HSPs)
scaffold0118 (13-152)||(28735-28874)
[»] scaffold0888 (1 HSPs)
scaffold0888 (13-131)||(24-142)
[»] scaffold1424 (1 HSPs)
scaffold1424 (13-89)||(1627-1703)
[»] scaffold0107 (1 HSPs)
scaffold0107 (208-259)||(39937-39988)


Alignment Details
Target: scaffold0356 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 18109 - 17855
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18109 tggacatcataattttcacccgatcggcaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 18010  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttgagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaac 212  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18009 caactaaatcaagcgttggtgcgagtattcccctttcttgagcggatcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaac 17910  T
Q  213 ggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  17909 ggatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttcac 17855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 5499 - 5239
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5499 tggacatcagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctgaaatcagtgacatcatatattcgttaacatgct 5400  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgac 206  Q
    ||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  5399 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtgac 5300  T
Q  207 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    |||||  |||||||||||||||||||||||||||||| ||||| |||||||||||| ||||    
T  5299 atcaatagatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcac 5239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 14193052 - 14192791
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14193052 tggacatcagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 14192953  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||| ||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  14192952 caactgaattaagcgttggtgcgagtattcccctttcttggaaaaatagcggatcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 14192853  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||| |||||||||||||||||||||||||||||| || || |||||||||||| ||||    
T  14192852 catcaacagatttgttgtgtccgatatgagcaaatcttcagaaatttctaccttcatttcac 14192791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 25543033 - 25542772
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25543033 tggacatcataattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 25542934  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25542933 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 25542834  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    |||||||  ||||||||||||||||||||| ||||||| ||||| |||||||||||| ||||    
T  25542833 catcaacatatttgttgtgtccgatatgagaaaatcttcaggaatttctaccttcatttcac 25542772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 22 - 267
Target Start/End: Complemental strand, 17871868 - 17871616
Alignment:
Q  22 gaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaat 121  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17871868 gaattttcacccgatcgacaaacagaaccagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 17871769  T
Q  122 caagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacgg 214  Q
    |||||||||||||||||||| ||||||||||       ||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||||||||    
T  17871768 caagcgttggtgcgagtatttccctttcttggaaaaatagcgggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaacgg 17871669  T
Q  215 atttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| ||||    
T  17871668 atttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcac 17871616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 39883162 - 39883423
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||| |||| |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||||| |||||||||||||||    
T  39883162 tggacatcataattgtcacccgatctacaaacagaatcagagcttaaatactctttctcttcacttggaatcaacgacatcataaattcgttaacatgct 39883261  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       ||| || |||||||||||||||||| |||||||||||||||||||||| ||||    
T  39883262 caactgaatcaagcgttggtgcgagtattcccctttcttggcaaaatagctgggcaccaaggttatcattcagatcgggatacacaaagtctataagtga 39883361  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||| ||||    
T  39883362 catcaacggatttgttgtgtccgatatcagcaaatctttaggaatatctaccttcatttcac 39883423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 37372915 - 37373176
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    |||||||||||||| |||||||||| | ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  37372915 tggacatcagaattatcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcataaattggttaacatgct 37373014  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttctt-------gagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    |||||||||||||||||||||||||||||||||||||||        ||  ||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  37373015 caactgaatcaagcgttggtgcgagtattcccctttcttcgaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 37373114  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    |||||||||||||||| |||| ||||| |||||||||| ||||| |||||||||||| ||||    
T  37373115 catcaacggatttgttatgtctgatatcagcaaatcttcaggaatttctaccttcatttcac 37373176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 8428814 - 8428553
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||| ||||||||||| | ||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  8428814 tggacatcagaatattcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 8428715  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||| |||||||||||| |||||||||||||||||||||||       ||  ||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  8428714 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 8428615  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||| ||||    
T  8428614 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcac 8428553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 13 - 259
Target Start/End: Original strand, 27881063 - 27881316
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||| ||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||    
T  27881063 tggacatcataattttcacccgatctacaaatagaatcagagcttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgct 27881162  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    || |||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  27881163 cagctgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 27881262  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctacctt 259  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||  |||||||||    
T  27881263 catcaacggatttgttgggtccgatatcagcaaatcttcaggagtttctacctt 27881316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 3689961 - 3690217
Alignment:
Q  18 atcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 117  Q
    |||||||||||| |||||||||||||| |||||| |||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||     
T  3689961 atcagaattttcgcccgatcgacaaactgaatcagagcttaaatactctttctctccacttggaatcactgacatcatatattcgttaacatgctcaacc 3690060  T
Q  118 gaatcaagcgttggtgcgagtattcccctttctt-------gagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 210  Q
    ||||||||||||||||||||||||| | ||||||       ||| |||||||||| ||||||||||||||||||||| |||||||| ||  |||||||||    
T  3690061 gaatcaagcgttggtgcgagtattcacttttcttgaaaaaagagtgggtcaccaatgttatcattcaaatcgggatatacaaagtccattagtgacatca 3690160  T
Q  211 acggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||| ||||||||| || ||||||||||||||||| |||| |||||||||||| ||||    
T  3690161 acgaatttgttgtatcggatatgagcaaatctttgggaatttctaccttcatttcac 3690217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 3876826 - 3876570
Alignment:
Q  18 atcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 117  Q
    |||||||||||| |||||||||||||| |||||| |||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||     
T  3876826 atcagaattttcgcccgatcgacaaactgaatcagagcttaaatactctttctctccacttggaatcactgacatcatatattcgttaacatgctcaacc 3876727  T
Q  118 gaatcaagcgttggtgcgagtattcccctttctt-------gagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatca 210  Q
    ||||||||||||||||||||||||| | ||||||       ||| ||||| |||| ||||||||||||||||||||| |||||||| ||  |||||||||    
T  3876726 gaatcaagcgttggtgcgagtattcacttttcttgaaaaaagagtgggtccccaatgttatcattcaaatcgggatatacaaagtccattagtgacatca 3876627  T
Q  211 acggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||| ||||||||| || ||||||||||||||||| |||| |||||||||||| ||||    
T  3876626 acgaatttgttgtatcggatatgagcaaatctttgggaatttctaccttcatttcac 3876570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 24630101 - 24629962
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24630101 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 24630002  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg 152  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24630001 caactgaatcaagcgttggtgcgagtattcccctttcttg 24629962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 10025042 - 10025181
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |    
T  10025042 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacttggaatcaatgacatcatatattcgttaacatgtt 10025141  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg 152  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10025142 caactgaatcaagcgttggtgcgagtattcccctttcttg 10025181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 30346784 - 30346645
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  30346784 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 30346685  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg 152  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  30346684 caacttaatcaagtgttggtgcgagtattcccctttcttg 30346645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 194
Target Start/End: Original strand, 37261294 - 37261482
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||    
T  37261294 tggacatcaaaattttcacccgatcgacaaacagaatcagagcttaaatactatttctcttcacctggaatcagtgacatcatatattcattaatatgct 37261393  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaag 194  Q
    ||||||||||||| ||||| || |||||||||||||||||       | |||||||  ||||||||||||||||| |||||||||||||    
T  37261394 caactgaatcaagtgttggcgcaagtattcccctttcttgaaaaaataacgggtcattaaggttatcattcaaattgggatacacaaag 37261482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 6089199 - 6089232
Alignment:
Q  23 aattttcacccgatcgacaaacagaatcaaagct 56  Q
    ||||||||||||||||||||||||||||| ||||    
T  6089199 aattttcacccgatcgacaaacagaatcagagct 6089232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 1860656 - 1860917
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  1860656 tggacatcagaattttcacccgatcaacaaacagaatcagagcttaaatactctttctcttcacccagaatcagtgacatcatatattcgttaacatgct 1860755  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  1860756 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtga 1860855  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  1860856 catcaacagatttgttgtgtccgatatgagcaaatctttaggaatttctaccttcatttcac 1860917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 49710152 - 49710412
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  49710152 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 49710251  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  49710252 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 49710351  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    |||||| |||||||||||||||||||| |||||||||| ||||| |||||||||||| ||||    
T  49710352 catcaa-ggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatttcac 49710412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 35855886 - 35856147
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| | ||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  35855886 tggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 35855985  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  35855986 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 35856085  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||| ||||    
T  35856086 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcac 35856147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 38518075 - 38518336
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| | ||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  38518075 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 38518174  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||| ||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||| | |||||||||||||||||||||| ||||    
T  38518175 caattgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatttagatcgggatacacaaagtctataagtga 38518274  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||| ||||    
T  38518275 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcac 38518336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 49787068 - 49786807
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    |||||||||||||||||||| |||| | ||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||    
T  49787068 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaatatgct 49786969  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||| |||||||||||| |||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  49786968 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtga 49786869  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||| ||||    
T  49786868 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcac 49786807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 55559278 - 55559139
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  55559278 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 55559179  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg 152  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  55559178 caactgaatcaagcgttggtgcgagtattcccctttcttg 55559139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 119 - 267
Target Start/End: Original strand, 13337320 - 13337475
Alignment:
Q  119 aatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaa 211  Q
    |||||||||||| |||||||||||||||||||||       ||  |||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||    
T  13337320 aatcaagcgttgatgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtgacataaa 13337419  T
Q  212 cggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||| |||||||||| | ||| |||||||||||| ||||    
T  13337420 cggatttgttgtgtccgatatcagcaaatcttcatgaatttctaccttcatttcac 13337475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 618268 - 618203
Alignment:
Q  202 gtgacatcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||    
T  618268 gtgacatgaacggatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcac 618203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 27509353 - 27509614
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27509353 tggacattagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 27509452  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    |||||||||||||||||| |||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27509453 caactgaatcaagcgttgatgcgagtattcccctttcttggaaaaatagcaggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 27509552  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
     ||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  27509553 tatcaacgaatttgttgtgtccgacatgagcaaatctttaggaatttctaccttcatctcac 27509614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 21 - 267
Target Start/End: Original strand, 24245812 - 24246065
Alignment:
Q  21 agaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaa 120  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24245812 agaattttcacccgatcgacaaacagaatcagatcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaa 24245911  T
Q  121 tcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacg 213  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||    
T  24245912 tcaagcgttggtgcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaggtctataagtgacatccacg 24246011  T
Q  214 gatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||    
T  24246012 gatttgttgtgtccgttatgagcaaatctttaggaatttctaccttcatttcac 24246065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 24269310 - 24269049
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24269310 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 24269211  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  24269210 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtga 24269111  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||| ||||    
T  24269110 catcaacagatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcac 24269049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 27192468 - 27192729
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  27192468 tggacatcaaaaatttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcatatattcgttaacatgct 27192567  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27192568 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 27192667  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  27192668 catcaacagatttgttgtgtccgatatgagcaaatctttaggaatttctaccttcatttcac 27192729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 27842282 - 27842543
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  27842282 tggacatcaaaaatttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcatatattcgttaacatgct 27842381  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27842382 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 27842481  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  27842482 catcaacagatttgttgtgtccgatatgagcaaatctttaggaatttctaccttcatttcac 27842543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 262
Target Start/End: Complemental strand, 17684069 - 17683813
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684069 tggacatcaaaattttcacccgatcgacaaacaaaatcatagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 17683970  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||| ||||||||||||||| ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17683969 caattgaatcaagcgttggagcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 17683870  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcat 262  Q
    |||||||||||||||||||||| |||||||| ||| || ||||| ||||||||||||    
T  17683869 catcaacggatttgttgtgtccaatatgagcgaatattcaggaatttctaccttcat 17683813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 21395349 - 21395610
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  21395349 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 21395448  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||| |||||||||||| | ||    
T  21395449 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatatacaaagtctataagcga 21395548  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||| ||||    
T  21395549 catcaacggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatttcac 21395610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 41920413 - 41920152
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| | ||| ||||||| || ||||||||||||| ||||||||||||||||  ||||||||| |||||||||||||||    
T  41920413 tggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttatcttcacctggaatcaacgacatcataaattcgttaacatgct 41920314  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
     || |||||||||||| |||||||||||||||||||||||       ||  ||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  41920313 taattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 41920214  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||| ||||    
T  41920213 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcac 41920152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 28666412 - 28666151
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    |||||||||||||||||||| |||| | ||| ||||||| || ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  28666412 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 28666313  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||| |||||||||||| |||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  28666312 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtga 28666213  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||  ||||| |||||||||| ||||| |||||||||||| ||||    
T  28666212 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcac 28666151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 13 - 207
Target Start/End: Original strand, 35609664 - 35609865
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  35609664 tggacatcagaattttcactcgatcgacaaacataatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatact 35609763  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||    
T  35609764 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaatgttatcattcaaatcggaatacacaaagtctataagtga 35609863  T
Q  206 ca 207  Q
    ||    
T  35609864 ca 35609865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 37825246 - 37824985
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    |||||||||||||||||||| |||| | ||| ||||||| || ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  37825246 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 37825147  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||| |||||||||||| |||||||||||||||||||||||       ||  ||||||||||||||||||| | ||||||||||||| |||||||| ||||    
T  37825146 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatttagatcgggatacacagagtctataagtga 37825047  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||  ||||| |||||||||| ||||| |||||||||||| ||||    
T  37825046 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcac 37824985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 186534 - 186794
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  186534 tggacatcagaattt-cacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 186632  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    || ||||||||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  186633 cagctgaatcaagcgttggtgcgagtattcccctttattggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 186732  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||    
T  186733 catcaacagatttgttgtgtacgatatgagcaaatcttcaggaatttctaccttcatttcac 186794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 10110579 - 10110840
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10110579 tggacatcagaattttcacccgatcaacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 10110678  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||||| || ||||    
T  10110679 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtga 10110778  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||| ||||||||| ||| |||||||||||||||| ||||| |||||||||||| ||||    
T  10110779 catcaacagatttgttgcgtctgatatgagcaaatcttcaggaatttctaccttcatttcac 10110840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 10000386 - 10000647
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10000386 tggacatcagaattttcacccgatcaacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 10000485  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||| |||||||||||||| || ||||    
T  10000486 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtga 10000585  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
     |||||| |||||||||  || |||||||||||||||| ||||| |||||||||||| ||||    
T  10000586 tatcaacagatttgttgcatctgatatgagcaaatcttcaggaatttctaccttcatttcac 10000647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 254
Target Start/End: Original strand, 50410151 - 50410399
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  50410151 tggacatcagaattttcacccgatcgacaaagagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatatttgttaacatgct 50410250  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    | ||||||||||||||||||||||||||||||||||||||       || ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  50410251 cgactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagtgggtcgccaaggttatcattcaaatcgggatacacaaagtctataagtga 50410350  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttct 254  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||| ||||    
T  50410351 catcagcggatttgttgtgtccgatatgagaaaatcttcaggaatttct 50410399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 13 - 257
Target Start/End: Original strand, 10237535 - 10237785
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10237535 tggacatcagaattttcacccgatcaacaaacataatcaaagcttaa-tactctttctcttcacctggaatcagtaacatcatatattcgttaacatgct 10237633  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||||| || ||||    
T  10237634 caactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtga 10237733  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctacc 257  Q
    ||||||| ||||||||| ||| ||||||||||| |||| ||||| |||||||    
T  10237734 catcaacagatttgttgcgtctgatatgagcaattcttcaggaatttctacc 10237785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 52918045 - 52918305
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52918045 tggacatcagaattttcacccgatcgacaaacaaaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 52918144  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||| ||||||||||||||||       |||| ||||||||||||||||||||||||||||||||| ||||||||| |||     
T  52918145 caactgaatcaagcgttggtgcgggtattcccctttcttggaaaaatagcgagtcaccaaggttatcattcaaatcgggatacacgaagtctataagtgg 52918244  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||| ||||||||||||||| ||   ||||||| | ||||| |||||||||||| ||||    
T  52918245 catcaacagatttgttgtgtccggtaacggcaaatc-tcaggaatttctaccttcatttcac 52918305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 10969021 - 10968761
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10969021 tggacatcagaattttcacccgatcgacaaacaaaataagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 10968922  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttctt-------gagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
     |||||||||||||||||||||||||||||||||| |||        ||| |||||| ||| ||||||||||||||||||||||||||||||||| |||     
T  10968921 aaactgaatcaagcgttggtgcgagtattccccttgcttagaaaaatagcaggtcacgaagtttatcattcaaatcgggatacacaaagtctataagtgg 10968822  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||||||||| |||||||| | || || |||||||||||| ||||    
T  10968821 catcaacggatttgttgtgtccgatatcagcaaatc-tcagaaatttctaccttcatttcac 10968761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 13530018 - 13530279
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    |||||| || |||||||||| ||||||||| ||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  13530018 tggacaccaaaattttcacctgatcgacaagcagaaccagagcttaaatactctttctcttcacctggactcagtgacatcatatattcgttaaaatgct 13530117  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||| ||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13530118 caactgaatgaagtgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 13530217  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||| ||||||| ||||||||   ||| |||||||||||| ||||    
T  13530218 catcaacggatttgttgtgtctgatatgaccaaatcttctagaatttctaccttcatttcac 13530279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 32750 - 33011
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| | ||| ||||||| || ||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||    
T  32750 tggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgct 32849  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| |||||||||||||||||| ||| ||||    
T  32850 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtccataagtga 32949  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||  ||||| |||||||||| ||||| |||||||||||| ||||    
T  32950 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcac 33011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 11368625 - 11368888
Alignment:
Q  13 tggacatcagaatttt-cacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgc 111  Q
    ||||||||||| |||| ||||| |||||||||  |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11368625 tggacatcagactttttcacccaatcgacaaattgaatcagagcttaaatactctttctcttcacctggaatcactgacatcatatattcgttaacatgc 11368724  T
Q  112 tcaactgaatcaagcgttggtgcgagtattcccctttctt--------gagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggt 203  Q
    ||||| ||||||||||||||||||||||||||| ||||||        |||||||||||||| ||||||||||||||||||||| |||||||||||  ||    
T  11368725 tcaaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaaagagcgggtcaccaatgttatcattcaaatcgggatatacaaagtctatgagt 11368824  T
Q  204 gacatcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||||| ||||||||||||||||  |||| |||||| ||||| ||||    
T  11368825 gacatcaacggatttgttgtgtcggatatgagcaaatcttcgggaatttctacattcatttcac 11368888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 46913050 - 46913244
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||| | ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||||||||    
T  46913050 tggacatcagaatttccccccgatcgacaaacataatcaaagcttaaatactatttttcttcacctggaattggtgacatcatatattcgttaacatgct 46913149  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctata 200  Q
    |||||||||||||||||||||||||||||| |||||||||       |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  46913150 caactgaatcaagcgttggtgcgagtattctcctttcttggaaaaatagcgggtcgccaaagttatcattcaaatcgggatacacaaagtctata 46913244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 11362239 - 11362475
Alignment:
Q  15 gacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatac-tctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 113  Q
    ||||||||| ||||| |||||||||||||| |||||| |||||||| |  |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11362239 gacatcagacttttcgcccgatcgacaaactgaatcagagcttaaaaaaatctttctcttcacctggaatcactgacatcatatattcgttaacatgctc 11362338  T
Q  114 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgac 206  Q
    ||| ||||||||||||||||||||||||||| |||||||       || |||||||||| ||||||||| ||||||||||| |||||||||||  |||||    
T  11362339 aaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaatagtgggtcaccaatgttatcatttaaatcgggatatacaaagtctattagtgac 11362438  T
Q  207 atcaacggatttgttgtgtccgatatgagcaaatctt 243  Q
    ||||||| ||||||||| || |||||||| |||||||    
T  11362439 atcaacgaatttgttgtatcggatatgagtaaatctt 11362475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 10038623 - 10038846
Alignment:
Q  17 catcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaac 116  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| | |||||||||||||||||||||||||||||||||||| |||| ||||||||     
T  10038623 catcagaattttcacccgatcgacaaacagaatgagagcttaaataatatttctcttcacctggaatcagtgacatcatatattcattaatatgctcaat 10038722  T
Q  117 tgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatc 209  Q
    ||||||||| ||||| ||||||||||||||||||||       |||||||||| ||||||||||||||||| ||||||||||||          ||||||    
T  10038723 tgaatcaagtgttggcgcgagtattcccctttcttggaaaaatagcgggtcactaaggttatcattcaaattgggatacacaaa----------gacatc 10038812  T
Q  210 aacggatttgttgtgtccgatatgagcaaatctt 243  Q
    ||| ||||||||||||| ||||| ||||||||||    
T  10038813 aacagatttgttgtgtctgatataagcaaatctt 10038846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 47692948 - 47693087
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    |||||||||||||||||  |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  47692948 tggacatcagaattttcgtccgatcgacaaacagaatcagaggttaaatactctttctcttcacctggaattagtgacatcatgtattcgttaacatgct 47693047  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg 152  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  47693048 caactgaatcaagcgttggtgcgaggattcccctttcttg 47693087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1139 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold1139
Description:

Target: scaffold1139; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 17 - 267
Target Start/End: Original strand, 983 - 1240
Alignment:
Q  17 catcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaac 116  Q
    ||||||||||||| |||||| |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  983 catcagaattttcgcccgattgacaaacaaaatcagagcttaaatactctttctcttcacttggaatcagtgacatcatatattcgttaacatgctcgac 1082  T
Q  117 tgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatc 209  Q
    ||||| ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1083 tgaattaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatc 1182  T
Q  210 aacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||    
T  1183 aacggatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcac 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 5828795 - 5828534
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5828795 tggacatcataattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 5828696  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||| ||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  5828695 caactgagtcaagtgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtga 5828596  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||  |||||||||||||||||||||||||||||| ||||| |||||||||||| ||||    
T  5828595 catcaaaagatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcac 5828534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 21070302 - 21070041
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||  ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21070302 tggacatctaaattttcacccgatcaacaaacagaatcagagcttaaatactctttctcttcaccaggaatcagtgacatcatatattcgttaacatgct 21070203  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       ||| ||| ||||||||||||||||| |||||||||||||||||||||| ||||    
T  21070202 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcaggttaccaaggttatcattcagatcgggatacacaaagtctataagtga 21070103  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||| ||||    
T  21070102 catcaacggatttgttgtgtctgatatgagcaaatcttcaggaatttctaccttcatttcac 21070041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 7036699 - 7036960
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| | ||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  7036699 tggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 7036798  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  7036799 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaagtagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 7036898  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||| ||||| ||| |||||| ||||| |||||||||||| ||||    
T  7036899 catcaacggatttgttgtgtctgatatcagcgaatcttcaggaatttctaccttcatttcac 7036960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 22 - 267
Target Start/End: Original strand, 22843792 - 22844044
Alignment:
Q  22 gaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaat 121  Q
    ||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22843792 gaattttcacccgatcgacaaacagaaacagaacttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 22843891  T
Q  122 caagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacgg 214  Q
    |||||||||||||||||||||||||||||||       ||| ||||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||| |    
T  22843892 caagcgttggtgcgagtattcccctttcttggaaaaatagcaggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaacag 22843991  T
Q  215 atttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    |||||||||||| |||||||||||||||| | ||| |||||||||||| ||||    
T  22843992 atttgttgtgtcagatatgagcaaatcttcaagaatttctaccttcatttcac 22844044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 12781389 - 12781127
Alignment:
Q  13 tggacatcagaattttcacccgatcg-acaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgc 111  Q
    |||||||||||||||||||||||||  | ||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  12781389 tggacatcagaattttcacccgatctcaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgc 12781290  T
Q  112 tcaactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtg 204  Q
    |||||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| |||||||||||||||||||||| |||    
T  12781289 tcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtg 12781190  T
Q  205 acatcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||||  |||| |||||||||| ||||| |||||||||||| ||||    
T  12781189 acatcaacggatttgttgtgtcttatatcagcaaatcttcaggaatttctaccttcatttcac 12781127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 9001385 - 9001124
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  9001385 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 9001286  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||| ||||||||||||||||||||||       ||  ||||||||||||||||| ||| ||||||||| |||||||||||| | ||    
T  9001285 caactgaatcaagcgttagtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcaatcagatcgggataaacaaagtctataagaga 9001186  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||||||||| | |||||||| | ||| |||||||||||| ||||    
T  9001185 catcaacggatttgttgtgtccgatatcaacaaatcttcaagaatttctaccttcatttcac 9001124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 12786218 - 12785957
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    |||||||||||||||||||| |||| | ||| ||||||| || ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  12786218 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 12786119  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||| |||||||||||| |||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  12786118 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtga 12786019  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||  ||||| |||||||||| ||||| |||||||||||| ||||    
T  12786018 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcac 12785957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 42232063 - 42232202
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||| ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  42232063 tggacatcagaattttcacccgagcgacaaacaaaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 42232162  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg 152  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  42232163 caactgaatcaagcgttggtgagagtattcccctttcttg 42232202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 18939139 - 18939183
Alignment:
Q  156 gggtcaccaaggttatcattcaaatcgggatacacaaagtctata 200  Q
    |||| ||||| ||||||||||||||||||||||||||||| ||||    
T  18939139 gggttaccaaagttatcattcaaatcgggatacacaaagtttata 18939183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 13 - 261
Target Start/End: Original strand, 36207194 - 36207449
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36207194 tggacatcataattttcacccgatcgacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 36207293  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||  ||||| ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36207294 caactgaatcaattgttggggcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 36207393  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttca 261  Q
    ||||||||||||||||||||| |||||||| ||||| | ||||| |||||||||||    
T  36207394 catcaacggatttgttgtgtcggatatgagaaaatcatcaggaatttctaccttca 36207449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 2453357 - 2453096
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2453357 tggacatcagaattttcacccgatcgacaaatagaatcagagcctaaatactctttctcttcacctggaattagtgacatcatatattcgttaacatgct 2453258  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||| ||| ||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || ||||||||||||| ||||    
T  2453257 caactcaataaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcggaattcacaaagtctataagtga 2453158  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||    
T  2453157 catcaacggatttgttgtgttcgatatgagcaaatcttcaggaatttctaccttcatttcac 2453096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 13 - 262
Target Start/End: Original strand, 2329148 - 2329401
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2329148 tggacatcagaattttcacccgatcgacaaagagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 2329247  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    | ||||||||||||||||||||||||||||||||||||||       || || ||||||||||||||||||||||||||||||||   ||||||| ||||    
T  2329248 cgactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagtggatcaccaaggttatcattcaaatcgggatacac---gtctataagtga 2329344  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcat 262  Q
    |||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  2329345 catcaacggatttgttgtgtccgatatgagaaaatcttcaggaatttctaccttcat 2329401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 16042004 - 16042265
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||    
T  16042004 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgct 16042103  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       ||| || |||||||||||||||||| || ||||||||||||||||||| | ||    
T  16042104 caactgaatcaagcgttggtgcgagtattcccctttcttggcaaaatagctgggcaccaaggttatcattcagattgggatacacaaagtctataagcga 16042203  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||| ||||    
T  16042204 catcaacggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatttcac 16042265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 18148667 - 18148928
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||| |||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18148667 tggacataagaattttcatccgatcgacaaacagaataagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 18148766  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||| ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||| | ||||||||||||| ||| ||||    
T  18148767 caaatgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaattgagatacacaaagtcgataagtga 18148866  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||| |||||||||||||||||||||| ||||||| |  || |||||||||||| ||||    
T  18148867 catcaacagatttgttgtgtccgatatgagaaaatcttcataaatttctaccttcatttcac 18148928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 16 - 267
Target Start/End: Complemental strand, 37390389 - 37390131
Alignment:
Q  16 acatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaa 115  Q
    |||||||||||||||||||||| | ||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  37390389 acatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaa 37390290  T
Q  116 ctgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacat 208  Q
    |||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  37390289 ctgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgacat 37390190  T
Q  209 caacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    |||||||||||||||||| ||||| |||||||||| ||||| |||||||||||| ||||    
T  37390189 caacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcac 37390131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 6311235 - 6310973
Alignment:
Q  13 tggacatcagaattttcacccgatcg-acaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgc 111  Q
    |||||||||||||||||||||||||  | ||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  6311235 tggacatcagaattttcacccgatctcaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgc 6311136  T
Q  112 tcaactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtg 204  Q
    |||||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| |||||||||||||||||||||| |||    
T  6311135 tcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtg 6311036  T
Q  205 acatcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    |||||||||||||||||||||| ||||| ||| |||||| ||||| |||||||||||| ||||    
T  6311035 acatcaacggatttgttgtgtctgatatcagcgaatcttcaggaatttctaccttcatttcac 6310973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 48775575 - 48775314
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||| ||||  |||||||||||||| |||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  48775575 tggacatcagactttttgcccgatcgacaaactgaatcagagcttaaatactctttctcttcacctggaatcatttacatcatatattcgttaacatgct 48775476  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttctt-------gagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    |||| ||||||||||||||||||||||||||| ||||||       |||| ||||||||| |||||||||| |||||||||| ||||||| |||  ||||    
T  48775475 caaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaagagcaggtcaccaatgttatcattctaatcgggatatacaaagtgtattagtga 48775376  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    |||||| | |||||||||||| ||||||||||||||||  |||| |||||||||||| ||||    
T  48775375 catcaaagaatttgttgtgtcggatatgagcaaatcttcgggaatttctaccttcatttcac 48775314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 200
Target Start/End: Complemental strand, 48238717 - 48238523
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  48238717 tggacatcaaagttttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcgcctggaatcagcgacatcatatattcgttaacatgct 48238618  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctata 200  Q
    ||||||||||||||||||||||||||||||| ||||||||       || ||||| |||||||||||||||||||||||||||||||||||||||    
T  48238617 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcgccaaggttatcattcaaatcgggatacacaaagtctata 48238523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 52500648 - 52500787
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  52500648 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 52500747  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg 152  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  52500748 caactgaatcaagcgttggtgcgagtattcccctttcttg 52500787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 156 - 262
Target Start/End: Original strand, 48233507 - 48233613
Alignment:
Q  156 gggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacggatttgttgtgtccgatatgagcaaatctttaggaacttcta 255  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||| ||||| |||||    
T  48233507 gggtcgccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcagcggatttgttgtgttcgatatgagtaaatcttcaggaatttcta 48233606  T
Q  256 ccttcat 262  Q
    |||||||    
T  48233607 ccttcat 48233613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 13 - 268
Target Start/End: Original strand, 18344104 - 18344366
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  18344104 tggacatcaaaattttcacccgatcgacaaatagaatcaaagcttaaatactctttctcttcgcctggaatcagcgacatcatatattcgtcaacatgct 18344203  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    |||||||||||||||||||||| |||||||||||||||||       ||  |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18344204 caactgaatcaagcgttggtgcaagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 18344303  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcact 268  Q
    ||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||    
T  18344304 catgaacggatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcact 18344366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 2202419 - 2202158
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2202419 tggacatcagaattttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 2202320  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    | ||||||| ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2202319 ctactgaattaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 2202220  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||| |||||| |||||||||||||||||  |||| |||||| ||||| ||||    
T  2202219 catcaacggatttattgtgttcgatatgagcaaatcttcgggaatttctacattcatttcac 2202158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 13 - 262
Target Start/End: Original strand, 10187523 - 10187779
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10187523 tggacatcaaaattttcacccgatcgacaaacagaatcatagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 10187622  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||| ||||||||| ||||| |||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10187623 caattgaatcaagtgttggagcgagtattcccttttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 10187722  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcat 262  Q
    ||||||||||||| |||||||| |||||||||||| || ||||| ||||||||||||    
T  10187723 catcaacggattttttgtgtccaatatgagcaaatattcaggaatttctaccttcat 10187779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 22 - 267
Target Start/End: Original strand, 30881315 - 30881567
Alignment:
Q  22 gaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaat 121  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30881315 gaattttcacccgatcgacaaacagaaccagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 30881414  T
Q  122 caagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatcaacgg 214  Q
    |||||||||||||||||||| ||||||||||       ||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||||||||    
T  30881415 caagcgttggtgcgagtatttccctttcttggaaaaatagcgggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaacgg 30881514  T
Q  215 atttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| ||||    
T  30881515 atttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcac 30881567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 13 - 268
Target Start/End: Original strand, 15333622 - 15333884
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    |||||||||||||||||||| |||| ||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  15333622 tggacatcagaattttcacctgatctacaaacagaatcagagcctaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 15333721  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||| |||||||||||||||||| ||| |||       ||| ||||||||||||||||||||| |||||||||||||||||||||  ||||    
T  15333722 caactgaatcaagtgttggtgcgagtattcccatttgttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctattagtga 15333821  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcact 268  Q
    ||||||||||||||||  || |||||| | |||||||| ||||| |||||||||||| |||||    
T  15333822 catcaacggatttgttacgtacgatatcaacaaatcttcaggaatttctaccttcatttcact 15333884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 15 - 267
Target Start/End: Complemental strand, 29640266 - 29640007
Alignment:
Q  15 gacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctca 114  Q
    ||||||||||||||||||||||| | ||| ||||| | || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  29640266 gacatcagaattttcacccgatctaaaaatagaattagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctca 29640167  T
Q  115 actgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgaca 207  Q
    ||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| ||| |||||||||||||||||| ||||||    
T  29640166 actgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcaggatacacaaagtctataagtgaca 29640067  T
Q  208 tcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||| |||||||||||   ||||| |||||||||| ||||| |||||||||||| ||||    
T  29640066 tcaacagatttgttgtggttgatatcagcaaatcttcaggaatttctaccttcatttcac 29640007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 15 - 267
Target Start/End: Complemental strand, 31510437 - 31510178
Alignment:
Q  15 gacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctca 114  Q
    ||||||||||||||||||||||| | ||| ||||| | || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  31510437 gacatcagaattttcacccgatctaaaaatagaattagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctca 31510338  T
Q  115 actgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgaca 207  Q
    ||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| ||  |||||||||||||||||| ||||||    
T  31510337 actgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagttggtcaccaaggttatcattcagattaggatacacaaagtctataagtgaca 31510238  T
Q  208 tcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||| |||||||||||   ||||| |||||||||| || || |||||||||||| ||||    
T  31510237 tcaacagatttgttgtggttgatatcagcaaatcttaagaaatttctaccttcatttcac 31510178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 12517367 - 12517506
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||| |||  |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  12517367 tggacatcagaattttcaccccatcatcaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 12517466  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg 152  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  12517467 caactgaatcaagcgttggtgcaaatattcccctttcttg 12517506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 18988 - 19241
Alignment:
Q  16 acatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaa 115  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18988 acatcagaattttcactcgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaa 19087  T
Q  116 ctgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacat 208  Q
    ||||||||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||  ||||||||||||||||| |||||||    
T  19088 ctgaatcaagcgttggtgcgagtattccccttttttggaaaaatagcgggtcaccaaggttatcattcaaatcaagatacacaaagtctataagtgacat 19187  T
Q  209 caacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcat 262  Q
    ||||  ||||||||||||||||||||||||||||| || || ||||||||||||    
T  19188 caacatatttgttgtgtccgatatgagcaaatcttcagaaatttctaccttcat 19241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 184; Significance: 1e-99; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 25218805 - 25218544
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  25218805 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 25218706  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  25218705 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 25218606  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||| ||||    
T  25218605 catcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcac 25218544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 21113984 - 21113723
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21113984 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 21113885  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    |||||||||||||||||||||| ||||||||||||| |||       |||||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  21113884 caactgaatcaagcgttggtgcaagtattccccttttttggaaaaatagcgggtcaccaaggttatcattcaaatcaagatacacaaagtctataagtga 21113785  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||| |||||||||||| ||||    
T  21113784 catcaacagatttgttgtgtccgatataagcaaatcttcaggaatttctaccttcatttcac 21113723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 30307156 - 30307417
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| | ||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  30307156 tggacatcagaattttcacccgatctaaaaatagaatcggagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 30307255  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       ||  |||||||||||||||| |||| |||||||||||||||||||||| ||||    
T  30307256 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcgttcagatcgggatacacaaagtctataagtga 30307355  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| |||||| ||||| ||||    
T  30307356 catcaacggatttgttgtgtccgatatcagcaaatcttcaggaatttctacattcatttcac 30307417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 7821817 - 7822078
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| | ||| ||||||| ||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||    
T  7821817 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctgaaatcagcgacatcataaattcgttaacatgct 7821916  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||| |||||||||||||||| ||||    
T  7821917 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcggaatacacaaagtctataagtga 7822016  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||  ||||| |||||||||| ||||| |||||||||||| ||||    
T  7822017 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcac 7822078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 13 - 240
Target Start/End: Complemental strand, 31978767 - 31978533
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    |||||||| |||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||| ||| |||||||    
T  31978767 tggacatctgaattttcccccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaatttgttgacatgct 31978668  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    |||||||||||||||||| |||||||||||||||||||||       ||| ||||||||||||||||||||| ||||||||||||||||| |||| ||||    
T  31978667 caactgaatcaagcgttgatgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtttataagtga 31978568  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaat 240  Q
    ||||||| ||||||||||| ||||||| |||||||    
T  31978567 catcaacagatttgttgtgcccgatatcagcaaat 31978533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 25209272 - 25209026
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||| ||||||| | ||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  25209272 tggacatcagaattttcgcccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 25209173  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||||||||||||||||||||||||||||||||||||||||       ||  |||||||||||||||||||               |||||||||| ||||    
T  25209172 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatt---------------aaagtctataagtga 25209088  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||| || || |||||||||| ||||| |||||||||||| ||||    
T  25209087 catcaacggatttgttgtgtctgacatcagcaaatcttcaggaatttctaccttcatttcac 25209026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 172; Significance: 2e-92; HSPs: 2)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 31912 - 32172
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  31912 tggacatcagaattttcacccgatctacaaacagaatcagagtttaaatactctttctcttcacctggaatcagcaacatcataaattcgttaacatgct 32011  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    |||||||||||||||||||||| |||| ||||||||||||       ||| ||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  32012 caactgaatcaagcgttggtgcaagta-tcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 32110  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||| ||||    
T  32111 catcaacggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatttcac 32172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 19436 - 19670
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||| ||| |||||||    
T  19436 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaatttgttgacatgct 19535  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    |||||||||||||||||| |||||||||||||||||||||       ||| ||||||||||||||||||||| ||||||||||||||||| |||| ||||    
T  19536 caactgaatcaagcgttgatgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtttataagtga 19635  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaat 240  Q
    ||||||| ||||||||||||||||||| |||||||    
T  19636 catcaacagatttgttgtgtccgatatcagcaaat 19670  T

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Target: scaffold0002 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 321576 - 321315
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| || |||||| |||||||||||||||    
T  321576 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctgaaatcagcgatatcataaattcgttaacatgct 321477  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    |||||||||||||| |||||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||||| |||||||||| ||||    
T  321476 caactgaatcaagcattggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacaaaaagtctataagtga 321377  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    |||||||||||||||| |||||||||| |||||||||| ||||| |||||||||||| ||||    
T  321376 catcaacggatttgttttgtccgatatcagcaaatcttcaggaatttctaccttcatttcac 321315  T

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Target: scaffold0550 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 13 - 262
Target Start/End: Complemental strand, 812 - 556
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  812 tggacatcagaattttcacccaatctacaaacagaatcagaggttaaatactctttcttttcacctggaatcagcgacatcataaattcattaacatgct 713  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    |||||||||||||||||||||||||||||||||||| |||       ||| ||||||||||||||||||| | ||||||||||||||||| |||| ||||    
T  712 caactgaatcaagcgttggtgcgagtattcccctttattggaaaaatagctggtcaccaaggttatcatttagatcgggatacacaaagtttataagtga 613  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcat 262  Q
    ||||||||| ||||||||||| ||||| |||||||||| ||||| ||||||||||||    
T  612 catcaacgggtttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcat 556  T

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Target: scaffold0090 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 13 - 267
Target Start/End: Complemental strand, 49176 - 48915
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    |||||||||||||||||||| |||| | ||| ||||||| || ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  49176 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 49077  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    ||| |||||||||||| |||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  49076 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtga 48977  T
Q  206 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    ||||||||||||||||||||  ||||| |||||||||| ||||| |||||||||||| ||||    
T  48976 catcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcac 48915  T

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Target: scaffold0003 (Bit Score: 148; Significance: 4e-78; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 17 - 267
Target Start/End: Original strand, 182794 - 183051
Alignment:
Q  17 catcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaac 116  Q
    ||||||| ||||| |||||||||||||| |||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  182794 catcagatttttcgcccgatcgacaaactgaatcagagcttaaatactctttctcttcacttggaatcactgacatcatatattcgttaacatgctcaac 182893  T
Q  117 tgaatcaagcgttggtgcgagtattcccctttctt-------gagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgacatc 209  Q
     ||||||||||||||||||||||||||| ||||||       ||| |||||||||| | ||||||||||||||||||| |||||||||||  ||||||||    
T  182894 cgaatcaagcgttggtgcgagtattcccttttcttggaaaaagagtgggtcaccaatgatatcattcaaatcgggatatacaaagtctattagtgacatc 182993  T
Q  210 aacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatctcac 267  Q
    |||| ||||||||| || ||||||||||||||||  |||| |||||||||||| ||||    
T  182994 aacgaatttgttgtatcggatatgagcaaatcttcgggaatttctaccttcatttcac 183051  T

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Target: scaffold0003; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 165511 - 165747
Alignment:
Q  15 gacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatac-tctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 113  Q
    ||||||||| ||||| |||||||||||||| |||||| |||||||| |  |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  165511 gacatcagacttttcgcccgatcgacaaactgaatcagagcttaaaaaaatctttctcttcacctggaatcactgacatcatatattcgttaacatgctc 165610  T
Q  114 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtgac 206  Q
    ||| ||||||||||||||||||||||||||| |||||||       || |||||||||| ||||||||| ||||||||||| |||||||||||  |||||    
T  165611 aaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaatagtgggtcaccaatgttatcatttaaatcgggatatacaaagtctattagtgac 165710  T
Q  207 atcaacggatttgttgtgtccgatatgagcaaatctt 243  Q
    ||||||| ||||||||| || |||||||| |||||||    
T  165711 atcaacgaatttgttgtatcggatatgagtaaatctt 165747  T

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Target: scaffold0025 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 13 - 232
Target Start/End: Original strand, 16663 - 16889
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||||||||||| | |||| || ||||||||||| |||||||| ||||||||||||||||| |||||||||| ||||||||| ||||||||| ||    
T  16663 tggacatcagaattttcgctcgattgaaaaacagaatcatagcttaaaaactctttctcttcacctagaatcagtgaaatcatatatgcgttaacatact 16762  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataggtga 205  Q
    | ||| ||| ||||||||||||||||||||||||||||||       ||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  16763 ccactaaattaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaagttatcattcaaatcgggatacacaaagtctataagtga 16862  T
Q  206 catcaacggatttgttgtgtccgatat 232  Q
    |||||||||||||||||||||||||||    
T  16863 catcaacggatttgttgtgtccgatat 16889  T

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Target: scaffold0118 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 28874 - 28735
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    ||||||||| ||||||||||| | ||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  28874 tggacatcaaaattttcacccaagcgacaaacagaatcagagtttaaatactttttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 28775  T
Q  113 caactgaatcaagcgttggtgcgagtattcccctttcttg 152  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28774 caactgaatcaagcgttggtgcgagtattcccctttcttg 28735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 142 - 24
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 112  Q
    |||| |||||||||||||||||||||||| ||| ||||| |||||||||||||||||||  |||||| ||||||||||||| ||||||||||||||||||    
T  142 tggaaatcagaattttcacccgatcgacatacaaaatcagagcttaaatactctttctcgccacctgaaatcagtgacatcgtatattcgttaacatgct 43  T
Q  113 caactgaatcaagcgttgg 131  Q
    |||||||||||||| ||||    
T  42 caactgaatcaagccttgg 24  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1424 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1424
Description:

Target: scaffold1424; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 1627 - 1703
Alignment:
Q  13 tggacatcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtga 89  Q
    ||||||||| ||||||||||||||||| ||||| ||||| || |||||||| |||||||||||||||||||||||||    
T  1627 tggacatcaaaattttcacccgatcgataaacataatcagagtttaaatacgctttctcttcacctggaatcagtga 1703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 39937 - 39988
Alignment:
Q  208 tcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctacctt 259  Q
    ||||||||||||||||||||||||| |||||||||| | ||| |||||||||    
T  39937 tcaacggatttgttgtgtccgatatcagcaaatcttcaagaatttctacctt 39988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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