View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7686_low_5 (Length: 433)
Name: NF7686_low_5
Description: NF7686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7686_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 388; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 1 - 411
Target Start/End: Complemental strand, 33110172 - 33109755
Alignment:
| Q |
1 |
tttgtgagaagaagacaaaaagtgataggacataaaagaagataagggatataaaatggacttacctgattgaaaatttggtttaggcaatgacttgcca |
100 |
Q |
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| T |
33110172 |
tttgtgagaagaagacaaaaagtgataggacataaaagaagataagggatataaaatggacttacctgattgaaaatttggtttaggcaatgacttgcca |
33110073 |
T |
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| Q |
101 |
atgttgctattaatttatactttgatatcagacttctctgacatttgtaaatgttatcatgattcgtgacttgcgaaatcaaattattattattatcaga |
200 |
Q |
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| T |
33110072 |
atgttgctattaatttatactttgatatcagacttctctgacatttgtaaatgttatcatgatttgtgacttgcgaaatcaaattattattattatcaga |
33109973 |
T |
|
| Q |
201 |
aagatcacttcgagtttgagaagacacgggagaagatatattgttttcagaaagcatggtatgagaaaaatcatgatcaaatgacaggtacactagctgg |
300 |
Q |
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| T |
33109972 |
aagatcacttcgagtttgagaagacacgggagaagatatattgttttcagaaagcatggtatgagaaaaatcatgatcaaatgacaggtacactagctgg |
33109873 |
T |
|
| Q |
301 |
attttgctgaggggtagcaatgcatgatgtat-------gatgcctaagctttcataaaaggaaggataacactctgaattcggtatccggcccaaggac |
393 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33109872 |
attttgctgaggggtagcaatgcatgatgtatgatgaatgatgcctaagctttcataaaaggaaggataacactctgaattcggtatccggcccaaggac |
33109773 |
T |
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| Q |
394 |
atactaatccgaggggtt |
411 |
Q |
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| T |
33109772 |
atactaatccgaggggtt |
33109755 |
T |
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