View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7687_high_1 (Length: 948)

Name: NF7687_high_1
Description: NF7687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7687_high_1
NF7687_high_1
[»] chr4 (46 HSPs)
chr4 (13-643)||(55705562-55706192)
chr4 (715-933)||(55707485-55707703)
chr4 (305-496)||(47293429-47293620)
chr4 (296-498)||(56208510-56208712)
chr4 (332-477)||(45876736-45876881)
chr4 (738-900)||(56046201-56046363)
chr4 (332-465)||(45858817-45858950)
chr4 (314-496)||(54304200-54304388)
chr4 (19-152)||(45878669-45878802)
chr4 (638-704)||(9884949-9885013)
chr4 (636-704)||(20514647-20514716)
chr4 (642-704)||(13910621-13910684)
chr4 (642-704)||(23981120-23981181)
chr4 (643-704)||(31110251-31110313)
chr4 (639-704)||(52439334-52439399)
chr4 (644-704)||(46360688-46360748)
chr4 (638-701)||(46730942-46731005)
chr4 (643-701)||(3475695-3475752)
chr4 (643-704)||(24670722-24670784)
chr4 (643-704)||(28292052-28292113)
chr4 (635-704)||(36405850-36405919)
chr4 (638-704)||(4431524-4431592)
chr4 (638-704)||(13032881-13032948)
chr4 (644-704)||(22451933-22451993)
chr4 (643-704)||(13910847-13910910)
chr4 (643-704)||(27450092-27450154)
chr4 (641-704)||(35370385-35370448)
chr4 (643-704)||(42802557-42802620)
chr4 (19-107)||(45860198-45860286)
chr4 (84-152)||(47293222-47293290)
chr4 (642-704)||(4928821-4928884)
chr4 (642-696)||(23981357-23981409)
chr4 (644-695)||(34318405-34318455)
chr4 (642-704)||(46360890-46360952)
chr4 (50-145)||(56208877-56208972)
chr4 (642-704)||(21508138-21508199)
chr4 (641-704)||(35370150-35370215)
chr4 (666-704)||(40450490-40450528)
chr4 (644-701)||(51353223-51353281)
chr4 (638-695)||(1952729-1952785)
chr4 (642-704)||(7086062-7086125)
chr4 (642-695)||(32595632-32595685)
chr4 (643-703)||(36405658-36405718)
chr4 (638-704)||(41325527-41325595)
chr4 (642-704)||(49166643-49166707)
chr4 (642-704)||(49166958-49167022)
[»] chr5 (19 HSPs)
chr5 (332-478)||(35854542-35854688)
chr5 (334-498)||(10521303-10521467)
chr5 (22-151)||(35802699-35802828)
chr5 (332-408)||(35802504-35802580)
chr5 (633-704)||(18811115-18811187)
chr5 (638-704)||(4221964-4222029)
chr5 (644-703)||(28277459-28277519)
chr5 (638-704)||(31920342-31920409)
chr5 (638-704)||(25962796-25962863)
chr5 (645-704)||(4221737-4221796)
chr5 (643-704)||(9673125-9673188)
chr5 (58-134)||(10521033-10521109)
chr5 (644-696)||(12014723-12014775)
chr5 (644-704)||(22756378-22756440)
chr5 (643-704)||(5661872-5661932)
chr5 (642-695)||(7899719-7899772)
chr5 (642-704)||(12496532-12496596)
chr5 (644-704)||(13012623-13012681)
chr5 (638-695)||(27433731-27433788)
[»] chr8 (34 HSPs)
chr8 (312-495)||(7972058-7972241)
chr8 (296-494)||(7961689-7961887)
chr8 (644-704)||(5160292-5160353)
chr8 (21-152)||(7972414-7972545)
chr8 (644-704)||(11105770-11105831)
chr8 (642-704)||(11424332-11424396)
chr8 (638-704)||(25653698-25653765)
chr8 (638-690)||(38661627-38661679)
chr8 (644-704)||(9855985-9856047)
chr8 (640-704)||(22686973-22687039)
chr8 (643-702)||(41903603-41903662)
chr8 (638-704)||(26711545-26711611)
chr8 (641-704)||(37611477-37611542)
chr8 (638-704)||(20076380-20076448)
chr8 (640-704)||(23428934-23428998)
chr8 (643-704)||(23564101-23564161)
chr8 (643-704)||(5160495-5160558)
chr8 (665-704)||(21692419-21692459)
chr8 (642-701)||(21692605-21692664)
chr8 (643-695)||(31343363-31343415)
chr8 (643-704)||(45530734-45530797)
chr8 (640-704)||(4352309-4352375)
chr8 (642-704)||(13759519-13759582)
chr8 (665-704)||(16358373-16358412)
chr8 (640-704)||(19157926-19157991)
chr8 (636-704)||(23565886-23565955)
chr8 (643-704)||(11105946-11106008)
chr8 (663-704)||(94146-94187)
chr8 (640-704)||(5643021-5643086)
chr8 (640-704)||(5644962-5645027)
chr8 (19-60)||(7962124-7962165)
chr8 (642-704)||(11830489-11830553)
chr8 (642-704)||(12478571-12478635)
chr8 (642-700)||(41708826-41708885)
[»] chr2 (41 HSPs)
chr2 (334-465)||(24357457-24357588)
chr2 (635-704)||(34545680-34545749)
chr2 (643-704)||(39341353-39341413)
chr2 (638-704)||(5558216-5558282)
chr2 (639-704)||(493722-493788)
chr2 (645-695)||(18543804-18543854)
chr2 (644-704)||(17688151-17688210)
chr2 (644-704)||(24413801-24413861)
chr2 (643-704)||(31108345-31108408)
chr2 (642-704)||(40307655-40307719)
chr2 (646-704)||(493955-494014)
chr2 (642-704)||(22552503-22552565)
chr2 (644-704)||(23045167-23045228)
chr2 (642-704)||(45632541-45632603)
chr2 (643-704)||(22552680-22552742)
chr2 (643-704)||(24951903-24951964)
chr2 (643-704)||(8214557-8214617)
chr2 (644-704)||(29640763-29640823)
chr2 (641-704)||(7327765-7327828)
chr2 (645-704)||(17920092-17920151)
chr2 (641-704)||(28739405-28739468)
chr2 (643-704)||(34831490-34831553)
chr2 (645-704)||(43014974-43015031)
chr2 (644-704)||(14745856-14745918)
chr2 (644-704)||(31108579-31108640)
chr2 (644-704)||(33218639-33218701)
chr2 (643-690)||(39341265-39341311)
chr2 (643-700)||(14793456-14793513)
chr2 (643-700)||(24952056-24952113)
chr2 (643-704)||(33441504-33441565)
chr2 (644-704)||(5558449-5558509)
chr2 (644-704)||(8467207-8467267)
chr2 (641-690)||(13691741-13691790)
chr2 (641-704)||(16361130-16361194)
chr2 (643-703)||(17886428-17886489)
chr2 (642-704)||(18544002-18544065)
chr2 (665-703)||(30371405-30371445)
chr2 (638-695)||(32195900-32195956)
chr2 (648-704)||(35337132-35337189)
chr2 (644-704)||(38470956-38471016)
chr2 (643-704)||(43015197-43015258)
[»] chr7 (35 HSPs)
chr7 (639-704)||(45633696-45633761)
chr7 (638-704)||(30335174-30335241)
chr7 (643-704)||(35097762-35097821)
chr7 (647-704)||(4675929-4675986)
chr7 (642-704)||(19336041-19336104)
chr7 (644-704)||(22335515-22335576)
chr7 (638-704)||(24204962-24205030)
chr7 (641-704)||(24374264-24374328)
chr7 (638-703)||(24757355-24757421)
chr7 (645-704)||(25622137-25622194)
chr7 (644-704)||(10659956-10660018)
chr7 (644-704)||(24205199-24205261)
chr7 (638-704)||(28000115-28000181)
chr7 (643-704)||(15108321-15108383)
chr7 (641-695)||(28157020-28157074)
chr7 (642-703)||(29018033-29018095)
chr7 (647-704)||(44412300-44412358)
chr7 (643-704)||(5835730-5835789)
chr7 (642-704)||(14187907-14187971)
chr7 (644-696)||(2248638-2248690)
chr7 (639-704)||(3548758-3548825)
chr7 (643-704)||(21852966-21853028)
chr7 (643-704)||(24374497-24374560)
chr7 (643-704)||(48847935-48847998)
chr7 (643-701)||(19336282-19336341)
chr7 (665-703)||(35097609-35097648)
chr7 (643-704)||(3548998-3549060)
chr7 (643-704)||(11352583-11352645)
chr7 (665-703)||(15037404-15037442)
chr7 (641-704)||(21444179-21444243)
chr7 (643-704)||(27881105-27881167)
chr7 (665-702)||(30335381-30335419)
chr7 (643-704)||(45639721-45639782)
chr7 (642-683)||(442532-442573)
chr7 (644-685)||(24206738-24206779)
[»] scaffold0010 (2 HSPs)
scaffold0010 (638-704)||(145322-145390)
scaffold0010 (641-704)||(145544-145609)
[»] chr3 (36 HSPs)
chr3 (644-704)||(13468342-13468400)
chr3 (642-704)||(31341224-31341285)
chr3 (643-704)||(35359640-35359699)
chr3 (643-704)||(3841180-3841240)
chr3 (642-704)||(18945797-18945861)
chr3 (641-704)||(51102308-51102370)
chr3 (645-704)||(15289985-15290044)
chr3 (641-704)||(55090241-55090303)
chr3 (641-704)||(23388722-23388783)
chr3 (639-704)||(40066701-40066765)
chr3 (643-704)||(15096523-15096586)
chr3 (647-704)||(21655081-21655140)
chr3 (643-704)||(25924040-25924103)
chr3 (643-695)||(45333847-45333899)
chr3 (665-704)||(9797164-9797203)
chr3 (644-704)||(16308105-16308167)
chr3 (640-704)||(17261021-17261086)
chr3 (642-704)||(19301177-19301239)
chr3 (643-701)||(41747305-41747364)
chr3 (641-704)||(13003892-13003957)
chr3 (644-690)||(13041693-13041739)
chr3 (644-690)||(13049770-13049816)
chr3 (643-704)||(15096702-15096764)
chr3 (643-704)||(19111254-19111316)
chr3 (638-704)||(19757095-19757164)
chr3 (666-704)||(21549771-21549809)
chr3 (640-690)||(29013402-29013452)
chr3 (645-704)||(33887072-33887133)
chr3 (643-704)||(39846577-39846638)
chr3 (638-701)||(44512484-44512549)
chr3 (641-704)||(53523389-53523453)
chr3 (642-704)||(9650101-9650165)
chr3 (645-690)||(23526731-23526776)
chr3 (642-704)||(24286150-24286214)
chr3 (642-704)||(35434068-35434131)
chr3 (642-704)||(54012584-54012647)
[»] scaffold0009 (2 HSPs)
scaffold0009 (641-704)||(149983-150047)
scaffold0009 (643-701)||(150224-150284)
[»] chr6 (24 HSPs)
chr6 (643-704)||(21226954-21227017)
chr6 (642-704)||(308320-308384)
chr6 (640-704)||(29239697-29239762)
chr6 (638-704)||(308554-308623)
chr6 (643-704)||(31826403-31826465)
chr6 (665-702)||(7922337-7922374)
chr6 (642-704)||(19376064-19376125)
chr6 (642-704)||(21226724-21226785)
chr6 (642-704)||(7017068-7017130)
chr6 (645-704)||(19418177-19418236)
chr6 (644-704)||(24602639-24602701)
chr6 (642-704)||(33225440-33225502)
chr6 (643-704)||(10366603-10366665)
chr6 (667-704)||(25567724-25567762)
chr6 (642-704)||(31733281-31733346)
chr6 (644-704)||(2181317-2181377)
chr6 (641-704)||(2181544-2181606)
chr6 (638-704)||(11336648-11336716)
chr6 (642-704)||(21544128-21544192)
chr6 (642-704)||(22362616-22362680)
chr6 (644-704)||(27967466-27967526)
chr6 (640-704)||(27967696-27967760)
chr6 (644-704)||(33352612-33352672)
chr6 (668-704)||(33552569-33552606)
[»] chr1 (32 HSPs)
chr1 (644-694)||(43412822-43412872)
chr1 (638-696)||(43413066-43413124)
chr1 (645-704)||(51809986-51810047)
chr1 (642-704)||(15961737-15961801)
chr1 (638-704)||(24730199-24730267)
chr1 (638-704)||(46208193-46208261)
chr1 (642-704)||(50721922-50721986)
chr1 (644-695)||(12277188-12277238)
chr1 (642-704)||(52413119-52413181)
chr1 (645-704)||(6607404-6607464)
chr1 (642-704)||(12277449-12277513)
chr1 (643-704)||(16555525-16555587)
chr1 (643-704)||(24730055-24730118)
chr1 (639-704)||(35384220-35384287)
chr1 (644-704)||(24465903-24465965)
chr1 (642-704)||(39160432-39160494)
chr1 (641-696)||(46584066-46584121)
chr1 (644-704)||(51809756-51809817)
chr1 (644-690)||(972841-972886)
chr1 (647-704)||(15879965-15880023)
chr1 (642-704)||(24004748-24004809)
chr1 (643-704)||(25170955-25171014)
chr1 (639-700)||(27815225-27815287)
chr1 (642-703)||(37356265-37356327)
chr1 (643-704)||(50721720-50721781)
chr1 (639-704)||(50880053-50880118)
chr1 (642-703)||(14910073-14910134)
chr1 (643-700)||(17746480-17746536)
chr1 (643-696)||(23484711-23484764)
chr1 (642-704)||(26190728-26190792)
chr1 (667-704)||(26486556-26486593)
chr1 (665-702)||(47839961-47839998)
[»] scaffold0597 (1 HSPs)
scaffold0597 (644-704)||(6269-6330)
[»] scaffold0111 (1 HSPs)
scaffold0111 (632-704)||(29680-29752)
[»] scaffold1797 (2 HSPs)
scaffold1797 (643-704)||(674-737)
scaffold1797 (642-704)||(470-534)
[»] scaffold0384 (1 HSPs)
scaffold0384 (665-702)||(4427-4464)
[»] scaffold0025 (2 HSPs)
scaffold0025 (644-704)||(2756-2816)
scaffold0025 (638-704)||(2984-3053)
[»] scaffold0148 (1 HSPs)
scaffold0148 (642-704)||(34978-35041)
[»] scaffold0013 (1 HSPs)
scaffold0013 (644-704)||(149615-149677)
[»] scaffold0001 (1 HSPs)
scaffold0001 (665-704)||(53518-53559)
[»] scaffold0192 (2 HSPs)
scaffold0192 (646-704)||(14210-14270)
scaffold0192 (642-704)||(14443-14506)
[»] scaffold0092 (1 HSPs)
scaffold0092 (667-704)||(44581-44618)


Alignment Details
Target: chr4 (Bit Score: 591; Significance: 0; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 591; E-Value: 0
Query Start/End: Original strand, 13 - 643
Target Start/End: Original strand, 55705562 - 55706192
Alignment:
Q  13 atgggaagaaatcaggtctcttgctgcccaaaaacctgtcattgcttcaatgtatgacgtggcagcaagttcaggatagtacatggcaatgggagctgga 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  55705562 atgggaagaaatcaggtctcttgctgcccaaaaacctgtcattgcttcaatgtatgacgtggcagccagtgcaggatagtacatggcaatgggagctgga 55705661  T
Q  113 ataatagtagcagaaaatcttacattaactggttcaattgaaggagcagtcactcaaaacgtaaatcttgagaatctttatgaaactattcctctgaaag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  55705662 ataatagtagcagaaaatcttacattaactggttcaattgaaggagcagtcactcaaaacgtaaatcttgagaatctttttgaaactattcctctgaaag 55705761  T
Q  213 aaattgtacggaggggtaaactctctactgatacgttggttgatgagctatttgccaagagagaagatcacgattatacattattcgagctaatgcggct 312  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||    
T  55705762 aaattgtacggagcggtaaactctctactgatacgttggttgatgagctatttgccaagagagaagatcacgatcatacattatttgagctaacgcggct 55705861  T
Q  313 ctttccagatctatgactatagacaagatggaagaggttgcgcatgggagggtttggaccggtaaagacgcagcatctcatggtttggttgatgctattg 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55705862 ctttccagatctatgactatagacaagatggaagaggttgcgcatgggagggtttggaccggtaaagacgcagcatctcatggtttggttgatgctattg 55705961  T
Q  413 gtgggatatcgcgtgctattgctattgcaaaattgaaagctaatatacctcaaaacagagaggttattgttgtggagctctcaagaactgatggacttag 512  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  55705962 gtgggatatcgcgtgctattgctattacaaaattgaaagctaatatacctcaaaacagagaggttattgttgtggagctctcaagatctgatggacttag 55706061  T
Q  513 cacattctgatggaccatgttttagaatttggatggatatccatctgcctacaccattccaggatctgtgaatgatcaactcgattctttgtagagggat 612  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55706062 cacattctgatggaccatgttttagaatttggatggatatccatctgcctacaccattccaggatctgtgaatgatcaactcgattctttgtagagggat 55706161  T
Q  613 attttcttggcataataactagtagaaaaaa 643  Q
    |||||||||| ||||||||||||||||||||    
T  55706162 attttcttggtataataactagtagaaaaaa 55706192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 715 - 933
Target Start/End: Original strand, 55707485 - 55707703
Alignment:
Q  715 ttttaacatgagcgtttcctgtgttgcagcaaccgggatatgacattgtagcacagttagtgattggatatctccttcctggaaatccaatagcaaactt 814  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55707485 ttttaacatgagcgtttcctgtgttgcagcaaccgggatatgacattgtagcacagttagtgattggatatctccttcctggaaatccaatagcaaactt 55707584  T
Q  815 gctcttccagatttatgggagaatcaacactgtccacacgctctctttcttgttagatctcaaacttaggcactacatgaaaattcttctcaatgcatgt 914  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  55707585 gctcttccagatttatgggagaatcaacactgtccacacgctctctttcttgtcagatctcaaacttaggcactacatgaaaattcttctcaatgcatgt 55707684  T
Q  915 acacatcaaaggtcttctc 933  Q
    |||||||||||||||||||    
T  55707685 acacatcaaaggtcttctc 55707703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 305 - 496
Target Start/End: Original strand, 47293429 - 47293620
Alignment:
Q  305 atgcggctctttccagatctatgactatagacaagatggaagaggttgcgcatgggagggtttggaccggtaaagacgcagcatctcatggtttggttga 404  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||| || || ||| |||||||| |||| ||||||| ||||||||||||||||||    
T  47293429 atgcggctctttccagatcaatgaccatagacaagatggaagaggttgcacagggaaggatttggaccagtaaggacgcagtatctcatggtttggttga 47293528  T
Q  405 tgctattggtgggatatcgcgtgctattgctattgcaaaattgaaagctaatatacctcaaaacagagaggttattgttgtggagctctcaa 496  Q
    ||||||||||||  ||||||| ||||||||||| ||||||||||| || |||||||||||||||||| |||| | | ||||||||| |||||    
T  47293529 tgctattggtggactatcgcgcgctattgctatagcaaaattgaaggccaatatacctcaaaacagacaggtcactcttgtggagcgctcaa 47293620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 296 - 498
Target Start/End: Complemental strand, 56208712 - 56208510
Alignment:
Q  296 ttcgagctaatgcggctctttccagatctatgactatagacaagatggaagaggttgcgcatgggagggtttggaccggtaaagacgcagcatctcatgg 395  Q
    |||||| ||||||||||||||||||||| |||||||||||  |||||||||||||||| || |||||||||| |||||||||||| |||  ||||| |||    
T  56208712 ttcgagataatgcggctctttccagatcaatgactatagatgagatggaagaggttgcacaggggagggtttagaccggtaaagatgcactatctcttgg 56208613  T
Q  396 tttggttgatgctattggtgggatatcgcgtgctattgctattgcaaaattgaaagctaatatacctcaaaacagagaggttattgttgtggagctctca 495  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||||||||| |||  |||||||||| ||| | | |||| |||||||||  |||||    
T  56208612 tttggttgatgctattggtgggctatctcgtgctattgctatagcaaaattgaaggctggtatacctcaagacaaacatgttactgttgtggacatctca 56208513  T
Q  496 aga 498  Q
    |||    
T  56208512 aga 56208510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 332 - 477
Target Start/End: Complemental strand, 45876881 - 45876736
Alignment:
Q  332 tagacaagatggaagaggttgcgcatgggagggtttggaccggtaaagacgcagcatctcatggtttggttgatgctattggtgggatatcgcgtgctat 431  Q
    |||||||||||||||||||||| || |||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  45876881 tagacaagatggaagaggttgcacaagggagggtttggaccggtaaggatgcagcatcccatggtttggttgatgctattggtgggctatctcgtgctat 45876782  T
Q  432 tgctattgcaaaattgaaagctaatatacctcaaaacagagaggtt 477  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||||    
T  45876781 tgctatagcaaaattgaaagctaatatacctcaagacagacaggtt 45876736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 738 - 900
Target Start/End: Original strand, 56046201 - 56046363
Alignment:
Q  738 ttgcagcaaccgggatatgacattgtagcacagttagtgattggatatctccttcctggaaatccaatagcaaacttgctcttccagatttatgggagaa 837  Q
    ||||||||||| |||||||||||| | ||||||||  |||| || ||||||||||||||||| ||||| ||||||||||||||  |||||||||||||||    
T  56046201 ttgcagcaacctggatatgacattattgcacagttcatgatcgggtatctccttcctggaaaaccaattgcaaacttgctctttaagatttatgggagaa 56046300  T
Q  838 tcaacactgtccacacgctctctttcttgttagatctcaaacttaggcactacatgaaaattc 900  Q
    ||| ||| |||||  | ||||||||||||  |||||| |||||| ||||||||||||||||||    
T  56046301 tcagcaccgtccatgcactctctttcttgcaagatcttaaacttgggcactacatgaaaattc 56046363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 332 - 465
Target Start/End: Complemental strand, 45858950 - 45858817
Alignment:
Q  332 tagacaagatggaagaggttgcgcatgggagggtttggaccggtaaagacgcagcatctcatggtttggttgatgctattggtgggatatcgcgtgctat 431  Q
    |||||||||||||||||| ||| || | |||||||||||||||||| || |||| |||||||||| |||||||||||||||||||| |||| ||||||||    
T  45858950 tagacaagatggaagaggctgcacaggagagggtttggaccggtaaggatgcagtatctcatggtctggttgatgctattggtgggctatcacgtgctat 45858851  T
Q  432 tgctattgcaaaattgaaagctaatatacctcaa 465  Q
    |||||| || |||||||| || ||||||||||||    
T  45858850 tgctatagccaaattgaaggccaatatacctcaa 45858817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 314 - 496
Target Start/End: Original strand, 54304200 - 54304388
Alignment:
Q  314 tttccagatctatgactatagacaagatggaagaggttgcgcatgggaggg------tttggaccggtaaagacgcagcatctcatggtttggttgatgc 407  Q
    |||||| ||| ||||| |||||||| |||||||||||| | || |||||||      ||||||| ||||| |||||| ||||||  ||||||||||||||    
T  54304200 tttccaaatcaatgacaatagacaaaatggaagaggttccacaggggagggggaaggtttggactggtaaggacgcaacatctctcggtttggttgatgc 54304299  T
Q  408 tattggtgggatatcgcgtgctattgctattgcaaaattgaaagctaatatacctcaaaacagagaggttattgttgtggagctctcaa 496  Q
    |||||| ||||| || |||||||||||||| ||||||||||| || |||||||||||||| || ||||||| | |||| || |||||||    
T  54304300 tattggcgggatgtctcgtgctattgctatagcaaaattgaaggccaatatacctcaaaatagtgaggttactcttgttgaactctcaa 54304388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 45878802 - 45878669
Alignment:
Q  19 agaaatcaggtctcttgctgcccaaaaacctgtcattgcttcaatgtatgacgtggcagcaagttcaggatagtacatggcaatgggagctggaataata 118  Q
    ||||||||||  ||| |||||| ||||||| |||||||||||||||| ||| ||||||||||||  |||||| ||||||||||||||||| |||   ||     
T  45878802 agaaatcaggcttctggctgccaaaaaaccagtcattgcttcaatgtctgatgtggcagcaagtggaggatactacatggcaatgggagcaggagctatt 45878703  T
Q  119 gtagcagaaaatcttacattaactggttcaattg 152  Q
    || ||||||| ||| || ||||||||||||||||    
T  45878702 gttgcagaaagtctaaccttaactggttcaattg 45878669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 638 - 704
Target Start/End: Original strand, 9884949 - 9885013
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||||||    
T  9884949 aaaaaagggttaatggtgttttacc--cctgtaatataggtcattttttgttttcccctgtaaaata 9885013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 636 - 704
Target Start/End: Original strand, 20514647 - 20514716
Alignment:
Q  636 agaaaaaagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    |||| |||||||||||||||||||| |   |||||||||||||||||||||| |||||||||||||||||    
T  20514647 agaataaagggttaatggtgttttacccctctgtaatataggtcatttttggttttccccctgtaaaata 20514716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 13910621 - 13910684
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    ||||||||||||||||||| |  | ||||||||||||||||||||| |||||||||||||||||    
T  13910621 aagggttaatggtgttttacccccttgtaatataggtcatttttggttttccccctgtaaaata 13910684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 23981120 - 23981181
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    ||||||||||||||||||| || | ||||||||||||||||||| |||| |||||||||||||    
T  23981120 aagggttaatggtgttttacct-catgtaatataggtcattttttgttttcccctgtaaaata 23981181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 643 - 704
Target Start/End: Original strand, 31110251 - 31110313
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaaata 704  Q
    |||||||||||||||||| |  |||||||||||||||| |||||| |||||||||||||||||    
T  31110251 agggttaatggtgttttacccccctgtaatataggtcattttttgttttccccctgtaaaata 31110313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 704
Target Start/End: Original strand, 52439334 - 52439399
Alignment:
Q  639 aaaaagggttaatggtgttttagctacctgtaatataggtcatttttggtttc-cccctgtaaaata 704  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||| ||||| |||||||||||||    
T  52439334 aaaaagggttaatggtgttttaccc-cctgtaatataggtcattttttgtttctcccctgtaaaata 52439399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 644 - 704
Target Start/End: Original strand, 46360688 - 46360748
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaaata 704  Q
    |||||||||||||||||||  |||||||||||||||| |||||| |||||||||||||||||    
T  46360688 gggttaatggtgttttagcc-cctgtaatataggtcattttttgttttccccctgtaaaata 46360748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 638 - 701
Target Start/End: Original strand, 46730942 - 46731005
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaa 701  Q
    ||||||||||||||||||||||| |  | ||||||||| ||||||||| |||| ||||||||||    
T  46730942 aaaaaagggttaatggtgttttatccccttgtaatatatgtcattttttgttttcccctgtaaa 46731005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 643 - 701
Target Start/End: Complemental strand, 3475752 - 3475695
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaa 701  Q
    ||||||||||||| ||| ||  ||||||||||||||||||||| |||||||||||||||    
T  3475752 agggttaatggtgcttt-gccccctgtaatataggtcattttttgtttccccctgtaaa 3475695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 24670784 - 24670722
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcat-ttttggtttccccctgtaaaata 704  Q
    ||||||||||||| |||| |  ||||||||||||||||| ||||| |||||||||||||||||    
T  24670784 agggttaatggtgctttacccccctgtaatataggtcattttttgttttccccctgtaaaata 24670722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 643 - 704
Target Start/End: Original strand, 28292052 - 28292113
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaaata 704  Q
    |||||||||||||||||| |  |||||||||||||||| |||||| |||||||||||||||||    
T  28292052 agggttaatggtgttttaccc-cctgtaatataggtcattttttgttttccccctgtaaaata 28292113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 635 - 704
Target Start/End: Complemental strand, 36405919 - 36405850
Alignment:
Q  635 tagaaaaaagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    |||||| |||||||||||||| |||| |  ||||||||||||||||||||||| ||| |||||||||||||    
T  36405919 tagaaataagggttaatggtgctttaccc-cctgtaatataggtcatttttggtttttcccctgtaaaata 36405850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 704
Target Start/End: Complemental strand, 4431592 - 4431524
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||||| ||||||| |  ||||||||||||||||||||| ||||  || |||||||||||    
T  4431592 aaaaaagggttaatgatgttttaccctcctgtaatataggtcattttttgttttccctcctgtaaaata 4431524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 704
Target Start/End: Original strand, 13032881 - 13032948
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||| |||||||||||||||||| |  ||||||||||||||||||||||||||  | ||||||||||||    
T  13032881 aaaatagggttaatggtgttttaccc-cctgtaatataggtcatttttggttttcctccctgtaaaata 13032948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 644 - 704
Target Start/End: Original strand, 22451933 - 22451993
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaaata 704  Q
    ||||||||||||||||| |  |||||||||||||||| |||||| |||||||||||||||||    
T  22451933 gggttaatggtgttttaccc-cctgtaatataggtcattttttgttttccccctgtaaaata 22451993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 13910910 - 13910847
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||| |||| |  ||||||||||||||||||||||||||   |||||||||||||    
T  13910910 agggttaatggtgctttacccccctgtaatataggtcatttttggttttctcccctgtaaaata 13910847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 27450154 - 27450092
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||||||| |  ||||||||||| ||||||||||||||  ||||||||||||||    
T  27450154 agggttaatggtgttttaccc-cctgtaatatatgtcatttttggttttcccccctgtaaaata 27450092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 641 - 704
Target Start/End: Complemental strand, 35370448 - 35370385
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    ||||||||||||||| |||| |  ||||||||||||||||||||||| |||||| ||||||||||    
T  35370448 aaagggttaatggtgctttaccc-cctgtaatataggtcatttttggttttccctctgtaaaata 35370385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 42802620 - 42802557
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||||||| |  ||||||||||| ||||||||||||||  || |||||||||||    
T  42802620 agggttaatggtgttttacccccctgtaatataagtcatttttggttttccctcctgtaaaata 42802557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 45860286 - 45860198
Alignment:
Q  19 agaaatcaggtctcttgctgcccaaaaacctgtcattgcttcaatgtatgacgtggcagcaagttcaggatagtacatggcaatgggag 107  Q
    ||||||||||  |||||| ||| |||||||  ||||||||||||||| ||| |||||||| |||  |||||| || ||||| |||||||    
T  45860286 agaaatcaggcttcttgcagccaaaaaaccaatcattgcttcaatgtctgatgtggcagctagtggaggatactatatggcgatgggag 45860198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 47293222 - 47293290
Alignment:
Q  84 caggatagtacatggcaatgggagctggaataatagtagcagaaaatcttacattaactggttcaattg 152  Q
    ||||||| ||| |||||||||| || ||| | || || |||||||||||||| ||||||||||||||||    
T  47293222 caggatactacgtggcaatgggcgcaggagttattgttgcagaaaatcttaccttaactggttcaattg 47293290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 4928821 - 4928884
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaaata 704  Q
    ||||||||||| ||||||| |  |||||||||||||||| |||||| |||||||||||| ||||    
T  4928821 aagggttaatgatgttttacccccctgtaatataggtcattttttgttttccccctgtacaata 4928884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 696
Target Start/End: Complemental strand, 23981409 - 23981357
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccct 696  Q
    |||||||||||||| |||| |  |||||||||||||||||||||||||| |||||    
T  23981409 aagggttaatggtgctttacc--cctgtaatataggtcatttttggttttcccct 23981357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 695
Target Start/End: Original strand, 34318405 - 34318455
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggtttccccc 695  Q
    ||||||||||||||||| |  ||||||||||||||||||||| |||||||||    
T  34318405 gggttaatggtgttttaccc-cctgtaatataggtcattttttgtttccccc 34318455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 46360952 - 46360890
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcat-ttttggtttccccctgtaaaata 704  Q
    |||||||||||||| |||| |  ||||||||||||||||| ||||| |||||||||||||||||    
T  46360952 aagggttaatggtgctttaccc-cctgtaatataggtcattttttgttttccccctgtaaaata 46360890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 145
Target Start/End: Complemental strand, 56208972 - 56208877
Alignment:
Q  50 gtcattgcttcaatgtatgacgtggcagcaagttcaggatagtacatggcaatgggagctggaataatagtagcagaaaatcttacattaactggt 145  Q
    ||||||||||| |||| | |  || ||||||||  ||||||  |||||||||||||||| ||| | || || |||||||||||||| |||||||||    
T  56208972 gtcattgcttcgatgtctcatatgacagcaagtggaggataccacatggcaatgggagcaggagttattgttgcagaaaatcttaccttaactggt 56208877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 21508199 - 21508138
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||| ||| |||| |  |||||||| |||||||||||||| ||||||||||||||||    
T  21508199 aagggttaatagtgctttaaccccctgtaatttaggtcatttttgg-ttccccctgtaaaata 21508138  T

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Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 641 - 704
Target Start/End: Original strand, 35370150 - 35370215
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||||| |||| |  ||| ||||||||||||||||| ||||  ||||||||||||||    
T  35370150 aaagggttaatggtgctttacccccctataatataggtcattttttgttttcccccctgtaaaata 35370215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 666 - 704
Target Start/End: Complemental strand, 40450528 - 40450490
Alignment:
Q  666 ctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  40450528 ctgtaatataggtcattttttgttttcccctgtaaaata 40450490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 644 - 701
Target Start/End: Original strand, 51353223 - 51353281
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaa 701  Q
    |||||||||||||||||  | | |||||||||||||||||| || ||||||||||||||    
T  51353223 gggttaatggtgttttacatccgtgtaatataggtcattttcggttttccccctgtaaa 51353281  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 695
Target Start/End: Original strand, 1952729 - 1952785
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccc 695  Q
    |||||||||||||||||| |||| |  ||||||||||||||||||||| |||| ||||    
T  1952729 aaaaaagggttaatggtgctttaccc-cctgtaatataggtcatttttagttttcccc 1952785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 7086125 - 7086062
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| ||||  || |||||||||||    
T  7086125 aagggttaatggtgttttaccc-cctgtaatataggtcattttttgttttccctcctgtaaaata 7086062  T

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Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 695
Target Start/End: Original strand, 32595632 - 32595685
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccc 695  Q
    |||||||||||||| || | |  ||| |||||||||||||||||||||||||||    
T  32595632 aagggttaatggtgcttaaccctcctataatataggtcatttttggtttccccc 32595685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 703
Target Start/End: Original strand, 36405658 - 36405718
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcattttt-ggtttccccctgtaaaat 703  Q
    ||||||||||||| |||| |  ||||||||||||||||||||| | ||||||||||||||||    
T  36405658 agggttaatggtgctttaccc-cctgtaatataggtcatttttagttttccccctgtaaaat 36405718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 704
Target Start/End: Complemental strand, 41325595 - 41325527
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||| |||||||| |  |||||||||||| ||||||| |||||  || |||||||||||    
T  41325595 aaaaaagggttaatagtgttttacccccctgtaatatagatcattttcggttttacctcctgtaaaata 41325527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 49166643 - 49166707
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||| |||||||| |  |||||||||||||||||||  |||||  ||||||||||||||    
T  49166643 aagggttaatagtgttttacccccctgtaatataggtcatttccggttttaccccctgtaaaata 49166707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 49167022 - 49166958
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||| |||||||| |  |||||||||||||||||||  |||||  ||||||||||||||    
T  49167022 aagggttaatagtgttttacccccctgtaatataggtcatttccggttttcccccctgtaaaata 49166958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 2e-55; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 332 - 478
Target Start/End: Original strand, 35854542 - 35854688
Alignment:
Q  332 tagacaagatggaagaggttgcgcatgggagggtttggaccggtaaagacgcagcatctcatggtttggttgatgctattggtgggatatcgcgtgctat 431  Q
    ||||||||||| || ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35854542 tagacaagatgaaaaaggttgcacatgggaggatttggaccggtaaggacgcagcatctcatggtttggttgatgctattggtgggatatcgcgtgctat 35854641  T
Q  432 tgctattgcaaaattgaaagctaatatacctcaaaacagagaggtta 478  Q
    |||||| ||||||||||| || |||||||||||||||||| ||||||    
T  35854642 tgctatagcaaaattgaaggccaatatacctcaaaacagacaggtta 35854688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 334 - 498
Target Start/End: Original strand, 10521303 - 10521467
Alignment:
Q  334 gacaagatggaagaggttgcgcatgggagggtttggaccggtaaagacgcagcatctcatggtttggttgatgctattggtgggatatcgcgtgctattg 433  Q
    ||||||||| ||||| || | ||| ||||| |||||| ||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10521303 gacaagatgaaagagattccacataggaggatttggatcgggaaggacgcagcatctcaaggtttggttgatgctattggtgggatatcgcgtgctattg 10521402  T
Q  434 ctattgcaaaattgaaagctaatatacctcaaaacagagaggttattgttgtggagctctcaaga 498  Q
    |||| |||||||| || || |||||||||||||||| | |||||| | |||| ||||||||||||    
T  10521403 ctatcgcaaaattcaaggccaatatacctcaaaacaaacaggttaatcttgtcgagctctcaaga 10521467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 22 - 151
Target Start/End: Complemental strand, 35802828 - 35802699
Alignment:
Q  22 aatcaggtctcttgctgcccaaaaacctgtcattgcttcaatgtatgacgtggcagcaagttcaggatagtacatggcaatgggagctggaataatagta 121  Q
    |||||| ||||||||| |  ||||||| |||||||||||||||| ||| | |||| ||||| ||||||| ||||||||||||||||| |||   || |||    
T  35802828 aatcagatctcttgcttcaaaaaaacccgtcattgcttcaatgtctgatgcggcaacaagtgcaggatactacatggcaatgggagcaggagctatcgta 35802729  T
Q  122 gcagaaaatcttacattaactggttcaatt 151  Q
    |||||||||||||| |||||||||||||||    
T  35802728 gcagaaaatcttactttaactggttcaatt 35802699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 332 - 408
Target Start/End: Complemental strand, 35802580 - 35802504
Alignment:
Q  332 tagacaagatggaagaggttgcgcatgggagggtttggaccggtaaagacgcagcatctcatggtttggttgatgct 408  Q
    ||||||||||| || ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  35802580 tagacaagatgaaaaaggttgcacatgggaggatttggaccggtaaggacgcagcatctcatggtttggttgatgct 35802504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 633 - 704
Target Start/End: Original strand, 18811115 - 18811187
Alignment:
Q  633 agtagaaaaaagggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaaata 704  Q
    |||||||||||||||||||||||||||| |  ||| |||||||||||| |||||| |||||||||||||||||    
T  18811115 agtagaaaaaagggttaatggtgttttacccccctataatataggtcattttttgttttccccctgtaaaata 18811187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 638 - 704
Target Start/End: Complemental strand, 4222029 - 4221964
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    ||||| ||||||||||| ||||| |  |||||||||||||||||||||||||| |||||||||||||    
T  4222029 aaaaaggggttaatggtattttaccc-cctgtaatataggtcatttttggttttcccctgtaaaata 4221964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 703
Target Start/End: Complemental strand, 28277519 - 28277459
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcat-ttttggtttccccctgtaaaat 703  Q
    ||||||||||||||||| |  ||||||||||||||||| ||||| ||||||||||||||||    
T  28277519 gggttaatggtgttttacccccctgtaatataggtcattttttgttttccccctgtaaaat 28277459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 638 - 704
Target Start/End: Complemental strand, 31920409 - 31920342
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    |||||||||||||| ||| |||| || |||||||||||||||||||  || |||||||||||||||||    
T  31920409 aaaaaagggttaatagtgatttacctccctgtaatataggtcatttccggttttccccctgtaaaata 31920342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 704
Target Start/End: Original strand, 25962796 - 25962863
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||| |||||||| |  |||||||||||||||||||| |||||  ||||||||||||||    
T  25962796 aaaaaagggttaatagtgttttaccc-cctgtaatataggtcattttcggttttaccccctgtaaaata 25962863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 645 - 704
Target Start/End: Original strand, 4221737 - 4221796
Alignment:
Q  645 ggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaaata 704  Q
    ||||||||||||||||||  |||||||||||||||| |||||| |||| ||||||||||||    
T  4221737 ggttaatggtgttttagcc-cctgtaatataggtcattttttgttttctccctgtaaaata 4221796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 9673188 - 9673125
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||| ||| |||| |  ||||||||||||||||||||||||||  ||||||||||||||    
T  9673188 agggttaatcgtgctttacccccctgtaatataggtcatttttggttttcccccctgtaaaata 9673125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 10521033 - 10521109
Alignment:
Q  58 ttcaatgtatgacgtggcagcaagttcaggatagtacatggcaatgggagctggaataatagtagcagaaaatctta 134  Q
    |||||||| ||| || ||||||||| ||||||| |||||||||| |||||| |||   || ||||||||||||||||    
T  10521033 ttcaatgtctgatgtagcagcaagtgcaggatactacatggcaacgggagcaggagatatcgtagcagaaaatctta 10521109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 644 - 696
Target Start/End: Complemental strand, 12014775 - 12014723
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggtttccccct 696  Q
    ||||||||||||||||| |  ||||||||||||||||||||| |||| |||||    
T  12014775 gggttaatggtgttttacccccctgtaatataggtcatttttagttttcccct 12014723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 704
Target Start/End: Complemental strand, 22756440 - 22756378
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||| |||||||| |  |||||||||||||||||||| |||||  ||||||||||||||    
T  22756440 gggttaatagtgttttacccccctgtaatataggtcattttcggttttaccccctgtaaaata 22756378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 5661932 - 5661872
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    ||||||||||||| |||| |  |||||||||||| |||||||| |||| |||||||||||||    
T  5661932 agggttaatggtgctttaccc-cctgtaatatagatcattttttgttttcccctgtaaaata 5661872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 695
Target Start/End: Original strand, 7899719 - 7899772
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccc 695  Q
    ||||||||||| ||||||| |  ||||||||||||||||||||| |||| ||||    
T  7899719 aagggttaatgatgttttacccccctgtaatataggtcattttttgttttcccc 7899772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 12496532 - 12496596
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||| |||| |  |||||| |||||||||||||| ||||  ||||||||||||||    
T  12496532 aagggttaatggtgctttacccccctgtagtataggtcattttttgttttcccccctgtaaaata 12496596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 704
Target Start/End: Complemental strand, 13012681 - 13012623
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||||| |||| |  |||||||||||||||||||| | ||| |||||||||||||    
T  13012681 gggttaatggtgctttacc--cctgtaatataggtcattttggtttttcccctgtaaaata 13012623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 695
Target Start/End: Complemental strand, 27433788 - 27433731
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccc 695  Q
    |||| ||||||||||||| |||| |  | |||||||||||||||||||||||| ||||    
T  27433788 aaaatagggttaatggtgctttacccccttgtaatataggtcatttttggttttcccc 27433731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 3e-44; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 312 - 495
Target Start/End: Complemental strand, 7972241 - 7972058
Alignment:
Q  312 tctttccagatctatgactatagacaagatggaagaggttgcgcatgggagggtttggaccggtaaagacgcagcatctcatggtttggttgatgctatt 411  Q
    |||||||||||| |||||| |||||||||||||||||||||| ||  ||||| |||||||||||||||| |||| |||| |||||||||| ||||||||     
T  7972241 tctttccagatcaatgactgtagacaagatggaagaggttgcacagaggaggatttggaccggtaaagatgcagtatctaatggtttggtcgatgctatc 7972142  T
Q  412 ggtgggatatcgcgtgctattgctattgcaaaattgaaagctaatatacctcaaaacagagaggttattgttgtggagctctca 495  Q
     ||||  ||||||||||||||||||| ||||||||||| || ||| | |||||||||||| | |||| | ||||||||||||||    
T  7972141 agtggactatcgcgtgctattgctatagcaaaattgaaggccaatcttcctcaaaacagacatgttactattgtggagctctca 7972058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 296 - 494
Target Start/End: Complemental strand, 7961887 - 7961689
Alignment:
Q  296 ttcgagctaatgcggctctttccagatctatgactatagacaagatggaagaggttgcgcatgggagggtttggaccggtaaagacgcagcatctcatgg 395  Q
    |||||| | ||||||||||||| ||||  ||||||||||||||||||||||||||||| || |||||  ||||||| |||||||| |||  |||| |||     
T  7961887 ttcgagatgatgcggctctttcaagattaatgactatagacaagatggaagaggttgcacaagggagaatttggactggtaaagatgcaatatctaatga 7961788  T
Q  396 tttggttgatgctattggtgggatatcgcgtgctattgctattgcaaaattgaaagctaatatacctcaaaacagagaggttattgttgtggagctctc 494  Q
    |||||| |||||||||||||| |||||||  ||||||||||| ||||||||||| || ||||| |||||||||| | | |||| | |||||||| ||||    
T  7961787 tttggtcgatgctattggtggaatatcgcacgctattgctatagcaaaattgaaggccaatattcctcaaaacaaacatgttactattgtggagttctc 7961689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 644 - 704
Target Start/End: Original strand, 5160292 - 5160353
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggttt-ccccctgtaaaata 704  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||||||||    
T  5160292 gggttaatggtgttttacccccctgtaatataggtcatttttggtttcccccctgtaaaata 5160353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 152
Target Start/End: Complemental strand, 7972545 - 7972414
Alignment:
Q  21 aaatcaggtctcttgctgcccaaaaacctgtcattgcttcaatgtatgacgtggcagcaagttcaggatagtacatggcaatgggagctggaataatagt 120  Q
    ||||||||||||||||| || ||||||| || |||||||  |||| |||  |||||   ||  ||||||| |||||||||||||| || ||| | || ||    
T  7972545 aaatcaggtctcttgcttccaaaaaaccagttattgctttgatgtctgatctggcaatgagcgcaggatactacatggcaatgggcgcaggagttattgt 7972446  T
Q  121 agcagaaaatcttacattaactggttcaattg 152  Q
     |||||||| ||||| ||||||||||||||||    
T  7972445 tgcagaaaaccttaccttaactggttcaattg 7972414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 644 - 704
Target Start/End: Original strand, 11105770 - 11105831
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    |||||||||||| |||| |  ||||||||||||||||||||||| |||||||||||||||||    
T  11105770 gggttaatggtgctttatccccctgtaatataggtcatttttggttttccccctgtaaaata 11105831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 11424396 - 11424332
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||| |||| |  ||||||||||||||||||||||||||  ||||||||||||||    
T  11424396 aagggttaatggtgctttacccccctgtaatataggtcatttttggttttcccccctgtaaaata 11424332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 638 - 704
Target Start/End: Original strand, 25653698 - 25653765
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||| |||||||| |  ||||||||||||||||||||||||||  ||||||||||||||    
T  25653698 aaaaaagggttaatagtgttttaccc-cctgtaatataggtcatttttggttttcccccctgtaaaata 25653765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 638 - 690
Target Start/End: Complemental strand, 38661679 - 38661627
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt 690  Q
    |||| |||||||||||||||||| |  ||||||||||||||||||||||||||    
T  38661679 aaaatagggttaatggtgttttatccccctgtaatataggtcatttttggttt 38661627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 644 - 704
Target Start/End: Original strand, 9855985 - 9856047
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||| |||| || |||||||||||| |||||||||||||  ||||||||||||||    
T  9855985 gggttaatggtgctttacctccctgtaatatagatcatttttggttttcccccctgtaaaata 9856047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 640 - 704
Target Start/End: Complemental strand, 22687039 - 22686973
Alignment:
Q  640 aaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||||| ||||||  ||| ||||||| ||||||||||||||  ||||||||||||||    
T  22687039 aaaagggttaatggtgctttagcctcctataatatatgtcatttttggttttcccccctgtaaaata 22686973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 643 - 702
Target Start/End: Original strand, 41903603 - 41903662
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaa 702  Q
    |||||||||||||||||| |  |||||||||||||||||||||  ||||||||| |||||    
T  41903603 agggttaatggtgttttaccctcctgtaatataggtcatttttaatttccccctataaaa 41903662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 638 - 704
Target Start/End: Complemental strand, 26711611 - 26711545
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||| |||||||||||||||| |  |||||||||||||||||||| | || |||||||| |||||    
T  26711611 aaaaaaaggttaatggtgttttatccccctgtaatataggtcattttggtttcccccctgtgaaata 26711545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 641 - 704
Target Start/End: Complemental strand, 37611542 - 37611477
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||||| |||| |  ||||||||||||||||||||| ||||  ||||||||||||||    
T  37611542 aaagggttaatggtgctttacccccctgtaatataggtcattttttgttttcccccctgtaaaata 37611477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 704
Target Start/End: Complemental strand, 20076448 - 20076380
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||| ||||||||||||  |||| |  ||||||||||||||||||||||||||  ||||||||||||||    
T  20076448 aaaatagggttaatggtactttatccccctgtaatataggtcatttttggttttcccccctgtaaaata 20076380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 640 - 704
Target Start/End: Complemental strand, 23428998 - 23428934
Alignment:
Q  640 aaaagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    ||||||||||||||||||||| |  |||||||||||||| ||||| || |||||||||||||||||    
T  23428998 aaaagggttaatggtgtttta-ccccctgtaatataggtaattttcggttttccccctgtaaaata 23428934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 704
Target Start/End: Original strand, 23564101 - 23564161
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    ||||||||||||| |||| |  ||||||||||||||||||||| |||| |||||||||||||    
T  23564101 agggttaatggtgctttaccc-cctgtaatataggtcattttttgttttcccctgtaaaata 23564161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 5160558 - 5160495
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||| |||| |  ||||||||||||||||||||| ||||  ||||||||||||||    
T  5160558 agggttaatggtgctttacccccctgtaatataggtcattttttgttttcccccctgtaaaata 5160495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 21692419 - 21692459
Alignment:
Q  665 cctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  21692419 cctgtaatataggtcatttttggttttccccctgtaaaata 21692459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 642 - 701
Target Start/End: Complemental strand, 21692664 - 21692605
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaa 701  Q
    |||||||||||||| |||| |  ||||||||||||||||||||||| ||||||||||||||    
T  21692664 aagggttaatggtgctttaccc-cctgtaatataggtcatttttggttttccccctgtaaa 21692605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 643 - 695
Target Start/End: Original strand, 31343363 - 31343415
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggtttccccc 695  Q
    ||||||||||||| |||| |  |||||||||||||||||||||||||| ||||    
T  31343363 agggttaatggtgctttacccccctgtaatataggtcatttttggttttcccc 31343415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 45530797 - 45530734
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||| ||||||| |  |||||||||||||| |||||||||||  ||||||||||||||    
T  45530797 agggttaatgatgttttacccccctgtaatataggttatttttggttttcccccctgtaaaata 45530734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 640 - 704
Target Start/End: Original strand, 4352309 - 4352375
Alignment:
Q  640 aaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||||  |||| |  |||||||||||||| |||||||||||  ||||||||||||||    
T  4352309 aaaagggttaatggtactttatccccctgtaatataggttatttttggttttcccccctgtaaaata 4352375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 13759582 - 13759519
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    |||||||||||||| ||||    |||| |||||||||||||||||| |||||||||||||||||    
T  13759582 aagggttaatggtgctttactctcctggaatataggtcatttttggttttccccctgtaaaata 13759519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 16358373 - 16358412
Alignment:
Q  665 cctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  16358373 cctgtaatataggtcattttttatttccccctgtaaaata 16358412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 640 - 704
Target Start/End: Original strand, 19157926 - 19157991
Alignment:
Q  640 aaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||||| |||| |  ||||| ||||||||||||||||||||  ||||||||||||||    
T  19157926 aaaagggttaatggtgctttaccc-cctgttatataggtcatttttggttttcccccctgtaaaata 19157991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 704
Target Start/End: Original strand, 23565886 - 23565955
Alignment:
Q  636 agaaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||||||||| |||| |  | ||||||||||||||||||| ||||  ||||||||||||||    
T  23565886 agaaaaaagggttaatggtgctttaccctc-tgtaatataggtcattttttgttttcccccctgtaaaata 23565955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 11106008 - 11105946
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcat-ttttggtttccccctgtaaaata 704  Q
    ||||||||||||| |||| |  ||||||||||||||||| ||||| ||| |||||||||||||    
T  11106008 agggttaatggtgctttacccccctgtaatataggtcattttttgtttttcccctgtaaaata 11105946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 663 - 704
Target Start/End: Original strand, 94146 - 94187
Alignment:
Q  663 tacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||| |||||||| |||||||||||||||| |||||||||||    
T  94146 tacccgtaatataagtcatttttggtttcctcctgtaaaata 94187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 704
Target Start/End: Complemental strand, 5643086 - 5643021
Alignment:
Q  640 aaaagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    |||||||||||| ||| |||| |  |||||||| |||||||||| ||| |||||||||||||||||    
T  5643086 aaaagggttaatagtgctttaaccccctgtaatttaggtcatttctggttttccccctgtaaaata 5643021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 704
Target Start/End: Complemental strand, 5645027 - 5644962
Alignment:
Q  640 aaaagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    |||||||||||| ||| |||| |  |||||||| |||||||||| ||| |||||||||||||||||    
T  5645027 aaaagggttaatagtgctttaaccccctgtaatttaggtcatttctggttttccccctgtaaaata 5644962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 7962165 - 7962124
Alignment:
Q  19 agaaatcaggtctcttgctgcccaaaaacctgtcattgcttc 60  Q
    |||||||||||||||||||||| ||||||| || ||||||||    
T  7962165 agaaatcaggtctcttgctgccaaaaaaccagttattgcttc 7962124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 11830553 - 11830489
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||| |||||||| |  |||||||||||||||||||  |||||  ||||||||||||||    
T  11830553 aagggttaatagtgttttacccccctgtaatataggtcatttccggttttcccccctgtaaaata 11830489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 12478571 - 12478635
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||| |||||||| |  |||||||||||||||||||  |||||  ||||||||||||||    
T  12478571 aagggttaatagtgttttacccccctgtaatataggtcatttccggttttaccccctgtaaaata 12478635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 700
Target Start/End: Original strand, 41708826 - 41708885
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttgg--tttccccctgtaa 700  Q
    |||||||||||||| |||| |  |||||||||||||||||||||||  |||||||||||||    
T  41708826 aagggttaatggtgctttaccc-cctgtaatataggtcatttttggtttttccccctgtaa 41708885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 4e-25; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 334 - 465
Target Start/End: Original strand, 24357457 - 24357588
Alignment:
Q  334 gacaagatggaagaggttgcgcatgggagggtttggaccggtaaagacgcagcatctcatggtttggttgatgctattggtgggatatcgcgtgctattg 433  Q
    |||||||||||  |||| || || ||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||||||  | || || |||||||    
T  24357457 gacaagatggagaaggtagcacaggggagagtttggactggtaaagatgcagcatcacatggtttggttgatgctattggtggcctttcccgagctattg 24357556  T
Q  434 ctattgcaaaattgaaagctaatatacctcaa 465  Q
    | || ||||||||||| || ||||||||||||    
T  24357557 ccatagcaaaattgaaggccaatatacctcaa 24357588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 635 - 704
Target Start/End: Original strand, 34545680 - 34545749
Alignment:
Q  635 tagaaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    ||||||||||||||||||||| |||| |   |||||||||| |||||||||||||| |||||||||||||    
T  34545680 tagaaaaaagggttaatggtgctttacccctctgtaatataagtcatttttggttttcccctgtaaaata 34545749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 39341413 - 39341353
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||||||||||| |  |||||||||||||||||||||||||| |||||||||||||    
T  39341413 agggttaatggtgttttaccc-cctgtaatataggtcatttttggttttcccctgtaaaata 39341353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 638 - 704
Target Start/End: Original strand, 5558216 - 5558282
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt-ccccctgtaaaata 704  Q
    |||||| |||||||||||||||| |  |||||||||||||||||||||||||| ||||||||||||||    
T  5558216 aaaaaaaggttaatggtgttttaccc-cctgtaatataggtcatttttggtttcccccctgtaaaata 5558282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 704
Target Start/End: Original strand, 493722 - 493788
Alignment:
Q  639 aaaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt-ccccctgtaaaata 704  Q
    ||||||||||||||||| |||| |  ||||||||||||||||||||| |||| ||||||||||||||    
T  493722 aaaaagggttaatggtgctttacccccctgtaatataggtcattttttgtttcccccctgtaaaata 493788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 695
Target Start/End: Original strand, 18543804 - 18543854
Alignment:
Q  645 ggttaatggtgttttagctacctgtaatataggtcatttttggtttccccc 695  Q
    |||||||||||||||| |  |||||||||||||||||||||||||||||||    
T  18543804 ggttaatggtgttttatccccctgtaatataggtcatttttggtttccccc 18543854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 704
Target Start/End: Complemental strand, 17688210 - 17688151
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    ||||||||||||||||| |  ||||||||||||||||||||| |||| |||||||||||||    
T  17688210 gggttaatggtgttttaccc-cctgtaatataggtcattttttgttttcccctgtaaaata 17688151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 704
Target Start/End: Complemental strand, 24413861 - 24413801
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||||| ||||    ||||||||||| ||||||||||||||||||||||||||||    
T  24413861 gggttaatggtgctttacacccctgtaatataagtcatttttggtttccccctgtaaaata 24413801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 704
Target Start/End: Original strand, 31108345 - 31108408
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||| |||| |  ||||||||||||||||||||||||||  ||||||||||||||    
T  31108345 agggttaatggtgctttacccccctgtaatataggtcatttttggttttcccccctgtaaaata 31108408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 40307655 - 40307719
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggtt-tcc-ccctgtaaaata 704  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||||| ||| ||||||||||||    
T  40307655 aagggttaatggtgttttacccccctgtaatataggtcatttttggttatcctccctgtaaaata 40307719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 646 - 704
Target Start/End: Complemental strand, 494014 - 493955
Alignment:
Q  646 gttaatggtgttttagctacctgtaatataggtcat-ttttggtttccccctgtaaaata 704  Q
    ||||||||||||||| |  ||||||||||||||||| ||||| |||||||||||||||||    
T  494014 gttaatggtgttttacccccctgtaatataggtcattttttgttttccccctgtaaaata 493955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 22552503 - 22552565
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaaata 704  Q
    ||||||||||||||||||| |  |||||||||||||||| |||||| |||||||||||||||||    
T  22552503 aagggttaatggtgttttaccc-cctgtaatataggtcattttttgttttccccctgtaaaata 22552565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 644 - 704
Target Start/End: Original strand, 23045167 - 23045228
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||| |||| || ||||||||||||||||||||||||||  ||||||||||||||    
T  23045167 gggttaatggtgatttacct-cctgtaatataggtcatttttggttttcccccctgtaaaata 23045228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 45632541 - 45632603
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaaata 704  Q
    ||||||||||||||||||| |  |||||||||||||||| |||||| |||||||||||||||||    
T  45632541 aagggttaatggtgttttaccc-cctgtaatataggtcattttttgttttccccctgtaaaata 45632603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 22552742 - 22552680
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt-ccccctgtaaaata 704  Q
    |||||||||||||||||| |  ||||||||||||||||||||| |||| | ||||||||||||    
T  22552742 agggttaatggtgttttacccccctgtaatataggtcattttttgtttactccctgtaaaata 22552680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 643 - 704
Target Start/End: Original strand, 24951903 - 24951964
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    ||||||||||||| |||| |  ||||||||||||||||||||||| |||||||||||||||||    
T  24951903 agggttaatggtgctttaacc-cctgtaatataggtcatttttggttttccccctgtaaaata 24951964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 8214617 - 8214557
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    ||||||||||||| |||| |  ||||||||||||||||||||||||||  ||||||||||||    
T  8214617 agggttaatggtgctttaccc-cctgtaatataggtcatttttggtttttccctgtaaaata 8214557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 644 - 704
Target Start/End: Original strand, 29640763 - 29640823
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    |||||||||||| |||| |  ||||||||||||||||||||||| |||||||||||||||||    
T  29640763 gggttaatggtgctttaccc-cctgtaatataggtcatttttggttttccccctgtaaaata 29640823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 641 - 704
Target Start/End: Original strand, 7327765 - 7327828
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaaata 704  Q
    ||||||||||||||| |||| |  |||||||||||||||| |||||| |||||||||||||||||    
T  7327765 aaagggttaatggtgctttaccc-cctgtaatataggtcattttttgttttccccctgtaaaata 7327828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 645 - 704
Target Start/End: Original strand, 17920092 - 17920151
Alignment:
Q  645 ggttaatggtgttttagctacctgtaatataggtcatttttggttt-ccccctgtaaaata 704  Q
    |||||||||||||||| |  ||||||||||||||||||||| |||| ||||||||||||||    
T  17920092 ggttaatggtgttttaccc-cctgtaatataggtcattttttgtttcccccctgtaaaata 17920151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 641 - 704
Target Start/End: Original strand, 28739405 - 28739468
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtcatttttggt-ttccccctgtaaaata 704  Q
    ||||||||||||||| |||| |  ||||||||||||||||||||| || ||||||||||||||||    
T  28739405 aaagggttaatggtgctttaccc-cctgtaatataggtcattttttgtcttccccctgtaaaata 28739468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 643 - 704
Target Start/End: Original strand, 34831490 - 34831553
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||| |||||||| |  ||||||||||| ||||||||||||||  ||||||||||||||    
T  34831490 agggttaatagtgttttatccccctgtaatatatgtcatttttggttttgccccctgtaaaata 34831553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 645 - 704
Target Start/End: Original strand, 43014974 - 43015031
Alignment:
Q  645 ggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||||||||| |  || |||||||||||||||||||||| |||| |||||||||    
T  43014974 ggttaatggtgttttacc--cccgtaatataggtcatttttggttcccccatgtaaaata 43015031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 704
Target Start/End: Original strand, 14745856 - 14745918
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||||||| |  | ||||||||||||||||||| ||||  ||||||||||||||    
T  14745856 gggttaatggtgttttacccccttgtaatataggtcattttttgttttcccccctgtaaaata 14745918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 704
Target Start/End: Complemental strand, 31108640 - 31108579
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||||||| |  ||||||||||||||||||||| ||||  ||||||||||||||    
T  31108640 gggttaatggtgttttaccc-cctgtaatataggtcattttttgttttcccccctgtaaaata 31108579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 704
Target Start/End: Complemental strand, 33218701 - 33218639
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||| |||||||| |  |||||||||||||||||||| |||||  ||||||||||||||    
T  33218701 gggttaatagtgttttacccccctgtaatataggtcattttcggttttaccccctgtaaaata 33218639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 690
Target Start/End: Original strand, 39341265 - 39341311
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt 690  Q
    |||||||||||||||||| |  ||||||||||||||||||||||||||    
T  39341265 agggttaatggtgttttaccc-cctgtaatataggtcatttttggttt 39341311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 14793513 - 14793456
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaa 700  Q
    ||||||||||||| |||| |  ||||||||||||||||||||||| |||||||||||||    
T  14793513 agggttaatggtgctttaccc-cctgtaatataggtcatttttggttttccccctgtaa 14793456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 24952113 - 24952056
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaa 700  Q
    ||||||||||||| |||| |  ||||||||||||||||||||||| |||||||||||||    
T  24952113 agggttaatggtgctttaccc-cctgtaatataggtcatttttggttttccccctgtaa 24952056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 643 - 704
Target Start/End: Original strand, 33441504 - 33441565
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt-ccccctgtaaaata 704  Q
    ||||||||||||| |||| |  |||||||||||||| ||||||||||| ||||||||||||||    
T  33441504 agggttaatggtgctttaccc-cctgtaatataggttatttttggtttcccccctgtaaaata 33441565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 704
Target Start/End: Complemental strand, 5558509 - 5558449
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcat-ttttggtttccccctgtaaaata 704  Q
    |||||||||||| |||| |  ||||||||||||||||| ||||| |||||||||||||||||    
T  5558509 gggttaatggtgctttatcc-cctgtaatataggtcattttttgttttccccctgtaaaata 5558449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 704
Target Start/End: Original strand, 8467207 - 8467267
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaaata 704  Q
    |||||||||||| |||| || |||||||||||||||| |||||| ||| |||||||||||||    
T  8467207 gggttaatggtgcttta-ctccctgtaatataggtcattttttgtttttcccctgtaaaata 8467267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 641 - 690
Target Start/End: Original strand, 13691741 - 13691790
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtcatttttggttt 690  Q
    ||||||||||||||| |||| |  ||||||||||||||||||||| ||||    
T  13691741 aaagggttaatggtgctttacccccctgtaatataggtcattttttgttt 13691790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 641 - 704
Target Start/End: Complemental strand, 16361194 - 16361130
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtcattttt-ggttt-ccccctgtaaaata 704  Q
    ||||||||||||||| |||| || ||||||||||||| ||||||| ||||| ||||||||||||||    
T  16361194 aaagggttaatggtgctttacct-cctgtaatataggccatttttaggtttaccccctgtaaaata 16361130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 703
Target Start/End: Original strand, 17886428 - 17886489
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaat 703  Q
    ||||||||| |||||||| |  |||||||||||||| ||||| || ||||||||||||||||    
T  17886428 agggttaatagtgttttaccatcctgtaatataggttattttcggttttccccctgtaaaat 17886489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 18544065 - 18544002
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttgg--tttccccctgtaaaata 704  Q
    ||||||||||||||||||| |  | ||||||||||||||||||| |  |||||||||||||||||    
T  18544065 aagggttaatggtgttttaccctc-tgtaatataggtcattttttgtttttccccctgtaaaata 18544002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 665 - 703
Target Start/End: Original strand, 30371405 - 30371445
Alignment:
Q  665 cctgtaatataggtcatttttggttt--ccccctgtaaaat 703  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  30371405 cctgtaatataggtcatttttggttttcccccctgtaaaat 30371445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 695
Target Start/End: Original strand, 32195900 - 32195956
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccc 695  Q
    ||||||||||||||||||||||| |  ||| ||||||||||||| |||||||| ||||    
T  32195900 aaaaaagggttaatggtgtttta-ccccctataatataggtcatatttggttttcccc 32195956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 704
Target Start/End: Complemental strand, 35337189 - 35337132
Alignment:
Q  648 taatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    |||||||| |||| |  ||||||||||||||||||||||| ||| |||||||||||||    
T  35337189 taatggtgctttacccccctgtaatataggtcatttttggtttttcccctgtaaaata 35337132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 704
Target Start/End: Complemental strand, 38471016 - 38470956
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggtttcc-ccctgtaaaata 704  Q
    ||||||||||||||||| |  ||||||||||||||| |||||| ||||| ||||||||||||    
T  38471016 gggttaatggtgttttaccc-cctgtaatataggtcttttttgttttcctccctgtaaaata 38470956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 43015258 - 43015197
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||| |||| |  ||||||||||||||||||||||||||   |||||||||||||    
T  43015258 agggttaatggtgctttacc--cctgtaatataggtcatttttggttttgtcccctgtaaaata 43015197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 1e-16; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 639 - 704
Target Start/End: Complemental strand, 45633761 - 45633696
Alignment:
Q  639 aaaaagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    ||||||||||||||||| |||| |  | ||||||||||||||||||||||||||||||||||||||    
T  45633761 aaaaagggttaatggtgctttatccccatgtaatataggtcatttttggtttccccctgtaaaata 45633696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 638 - 704
Target Start/End: Original strand, 30335174 - 30335241
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaaata 704  Q
    ||||||||||||||||||||||| |  |||||||||||||||| |||||| |||||||||||||||||    
T  30335174 aaaaaagggttaatggtgttttacccccctgtaatataggtcattttttgttttccccctgtaaaata 30335241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 35097821 - 35097762
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||||    
T  35097821 agggttaatggtgttttacc--cctgtaatataggtcattttttgtttccccctgtaaaata 35097762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 647 - 704
Target Start/End: Original strand, 4675929 - 4675986
Alignment:
Q  647 ttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    ||||||||| |||| |  |||||||||||||||||||||||||| |||||||||||||    
T  4675929 ttaatggtgctttacccccctgtaatataggtcatttttggttttcccctgtaaaata 4675986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 19336041 - 19336104
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||||||  ||||||||||||||    
T  19336041 aagggttaatggtgttttaccc-cctgtaatataggtcatttttggttttcccccctgtaaaata 19336104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 644 - 704
Target Start/End: Complemental strand, 22335576 - 22335515
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    |||||||||||| |||| |  ||||||||||||||||||||||| |||||||||||||||||    
T  22335576 gggttaatggtgctttacccccctgtaatataggtcatttttggttttccccctgtaaaata 22335515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 638 - 704
Target Start/End: Original strand, 24204962 - 24205030
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||||||| |||| |  ||||||||||||||||| ||||||||  ||||||||||||||    
T  24204962 aaaaaagggttaatggtgctttacccccctgtaatataggtcatatttggttttcccccctgtaaaata 24205030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 641 - 704
Target Start/End: Original strand, 24374264 - 24374328
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    ||||||||||||||| |||| |  |||||||||||||||||||| || |||||||||||||||||    
T  24374264 aaagggttaatggtgctttacccccctgtaatataggtcattttgggttttccccctgtaaaata 24374328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 638 - 703
Target Start/End: Original strand, 24757355 - 24757421
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttgg--tttccccctgtaaaat 703  Q
    |||| |||||||||||||||||| || | |||||||||||||||||||||  ||||||||||||||||    
T  24757355 aaaatagggttaatggtgttttaccttc-tgtaatataggtcatttttggtttttccccctgtaaaat 24757421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 645 - 704
Target Start/End: Original strand, 25622137 - 25622194
Alignment:
Q  645 ggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    ||||||||||| |||| |  |||||||||||||||||||||||||| |||||||||||||    
T  25622137 ggttaatggtgctttacc--cctgtaatataggtcatttttggttttcccctgtaaaata 25622194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 644 - 704
Target Start/End: Complemental strand, 10660018 - 10659956
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||| |||| |  ||||||||||||||||||||||||||  ||||||||||||||    
T  10660018 gggttaatggtgctttacccccctgtaatataggtcatttttggttttcccccctgtaaaata 10659956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 644 - 704
Target Start/End: Complemental strand, 24205261 - 24205199
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||||||| |  ||||||||||||||||||||| ||||  ||||||||||||||    
T  24205261 gggttaatggtgttttacccccctgtaatataggtcattttttgttttcccccctgtaaaata 24205199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 638 - 704
Target Start/End: Complemental strand, 28000181 - 28000115
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcat-ttttggtttccccctgtaaaata 704  Q
    |||||||||||||||||| |||| |  ||||||||||||||||| ||||| |||||||||||||||||    
T  28000181 aaaaaagggttaatggtgctttaccc-cctgtaatataggtcattttttgttttccccctgtaaaata 28000115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 15108383 - 15108321
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcat-ttttggtttccccctgtaaaata 704  Q
    ||||||||||||| |||| |  ||||||||||||||||| ||||| |||||||||||||||||    
T  15108383 agggttaatggtgctttaccctcctgtaatataggtcattttttgttttccccctgtaaaata 15108321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 641 - 695
Target Start/End: Original strand, 28157020 - 28157074
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccc 695  Q
    ||||||||||||||| |||| |  |||||||||||||||||||||||||| ||||    
T  28157020 aaagggttaatggtgctttacccccctgtaatataggtcatttttggttttcccc 28157074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 642 - 703
Target Start/End: Complemental strand, 29018095 - 29018033
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaaat 703  Q
    ||||||||||||||||||| |  |||||||||||||| | |||||| ||||||||||||||||    
T  29018095 aagggttaatggtgttttacccccctgtaatataggttattttttgttttccccctgtaaaat 29018033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 647 - 704
Target Start/End: Original strand, 44412300 - 44412358
Alignment:
Q  647 ttaatggtgttttagctacctgtaatataggtcatttttggttt-ccccctgtaaaata 704  Q
    ||||||||| |||| |  |||||||||||||||||||||||||| ||||||||||||||    
T  44412300 ttaatggtgctttacccccctgtaatataggtcatttttggtttcccccctgtaaaata 44412358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 704
Target Start/End: Original strand, 5835730 - 5835789
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||||||||||| || |||||||||||||||||||||  ||| |||||||||||||    
T  5835730 agggttaatggtgtttta-ct-cctgtaatataggtcattttttattttcccctgtaaaata 5835789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 14187971 - 14187907
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||| |||||||| |  |||||||||||||||||||| |||||  ||||||||||||||    
T  14187971 aagggttaatagtgttttacccccctgtaatataggtcattttcggtttgaccccctgtaaaata 14187907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 644 - 696
Target Start/End: Complemental strand, 2248690 - 2248638
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggtttccccct 696  Q
    |||||||||||| |||| |  |||||||||||||||||||||||||| |||||    
T  2248690 gggttaatggtgctttaccctcctgtaatataggtcatttttggttttcccct 2248638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 639 - 704
Target Start/End: Original strand, 3548758 - 3548825
Alignment:
Q  639 aaaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||||||| |||| |  | ||||||||||||||||||| ||||  ||||||||||||||    
T  3548758 aaaaagggttaatggtgctttaccaccatgtaatataggtcattttttgttttcccccctgtaaaata 3548825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 21853028 - 21852966
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||| |||| || ||||||||||||||||||||||||||  || |||||||||||    
T  21853028 agggttaatggtgctttacct-cctgtaatataggtcatttttggttttccctcctgtaaaata 21852966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 24374560 - 24374497
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||| |||| |  ||||||||||||||||||||| ||||  ||||||||||||||    
T  24374560 agggttaatggtgctttatccccctgtaatataggtcattttttgttttcccccctgtaaaata 24374497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 643 - 704
Target Start/End: Original strand, 48847935 - 48847998
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||||||| |  |||||||||||||||||||||  |||  ||||||||||||||    
T  48847935 agggttaatggtgttttacccccctgtaatataggtcattttttattttcccccctgtaaaata 48847998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 701
Target Start/End: Complemental strand, 19336341 - 19336282
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcat-ttttggtttccccctgtaaa 701  Q
    ||||||||||||| |||| |  ||||||||||||||||| ||||| ||||||||||||||    
T  19336341 agggttaatggtgctttacccccctgtaatataggtcattttttgttttccccctgtaaa 19336282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 703
Target Start/End: Original strand, 35097609 - 35097648
Alignment:
Q  665 cctgtaatataggtcatttttgg-tttccccctgtaaaat 703  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  35097609 cctgtaatataggtcatttttggttttccccctgtaaaat 35097648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 3549060 - 3548998
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    |||||||||||||||||| |  ||| ||||||||||||||| ||| |||||| ||||||||||    
T  3549060 agggttaatggtgttttacccccctataatataggtcatttatggttttcccactgtaaaata 3548998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 11352645 - 11352583
Alignment:
Q  643 agggttaatggtgttttagctacc-tgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||||||||||| |  || |||||||||||||||||  |||| ||||||||||||||    
T  11352645 agggttaatggtgttttaccccccctgtaatataggtcatttccggttcccccctgtaaaata 11352583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 665 - 703
Target Start/End: Complemental strand, 15037442 - 15037404
Alignment:
Q  665 cctgtaatataggtcatttttggtttccccctgtaaaat 703  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  15037442 cctgtaatataggtcatttctggtttccccccgtaaaat 15037404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 641 - 704
Target Start/End: Complemental strand, 21444243 - 21444179
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||| |||||||| |  |||||||||||||||||||| |||||  ||||||||||||||    
T  21444243 aaagggttaatagtgttttaccc-cctgtaatataggtcattttcggttttaccccctgtaaaata 21444179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 27881167 - 27881105
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaaata 704  Q
    |||||||||||||||||| |  |||||||||||||| | |||||| ||| |||||||||||||    
T  27881167 agggttaatggtgttttacccccctgtaatataggttattttttgtttttcccctgtaaaata 27881105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 665 - 702
Target Start/End: Complemental strand, 30335419 - 30335381
Alignment:
Q  665 cctgtaatataggtcatttttgg-tttccccctgtaaaa 702  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  30335419 cctgtaatataggtcatttttggttttccccctgtaaaa 30335381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 45639782 - 45639721
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcat-ttttggtttccccctgtaaaata 704  Q
    ||||||||||||| |||| |  ||||||||||||||||| ||||| |||||||||||||||||    
T  45639782 agggttaatggtgctttaccc-cctgtaatataggtcattttttgttttccccctgtaaaata 45639721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 683
Target Start/End: Original strand, 442532 - 442573
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcattt 683  Q
    |||||||||| ||||||||||  |||||||||||||||||||    
T  442532 aagggttaatagtgttttagccccctgtaatataggtcattt 442573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 685
Target Start/End: Complemental strand, 24206779 - 24206738
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcattttt 685  Q
    ||||||||||||||||| |  |||||||||||||||||||||    
T  24206779 gggttaatggtgttttacccccctgtaatataggtcattttt 24206738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 638 - 704
Target Start/End: Original strand, 145322 - 145390
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttg--gtttccccctgtaaaata 704  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||||   |||||||||||||||||    
T  145322 aaaaaagggttaatggtgttttacccccctgtaatataggtcatttttgatttttccccctgtaaaata 145390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 641 - 704
Target Start/End: Complemental strand, 145609 - 145544
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||||| |||| |  ||||||||||||||||||||| ||||  ||||||||||||||    
T  145609 aaagggttaatggtgctttatccccctgtaatataggtcattttttgttttcccccctgtaaaata 145544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 644 - 704
Target Start/End: Complemental strand, 13468400 - 13468342
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||||||| |||||||||    
T  13468400 gggttaatggtgttttacc--cctgtaatataggtcatttttggtttccccatgtaaaata 13468342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 31341224 - 31341285
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||||||| |||| |  ||||||||||||||||||||| ||||||||||||||||||    
T  31341224 aagggttaatggtgctttatcc-cctgtaatataggtcattttttgtttccccctgtaaaata 31341285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 35359699 - 35359640
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||||||||||| |  ||||||||||||||||||||||||||  ||||||||||||    
T  35359699 agggttaatggtgttttacc--cctgtaatataggtcatttttggtttttccctgtaaaata 35359640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 643 - 704
Target Start/End: Original strand, 3841180 - 3841240
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    ||||||||||||  |||| | ||||||||||||||||||||||||||| |||||||||||||    
T  3841180 agggttaatggttctttacc-acctgtaatataggtcatttttggttttcccctgtaaaata 3841240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 18945797 - 18945861
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||  |||| | |||||||||||||||||||||||||||  ||||||||||||||    
T  18945797 aagggttaatggtactttacccacctgtaatataggtcatttttggttttaccccctgtaaaata 18945861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 641 - 704
Target Start/End: Complemental strand, 51102370 - 51102308
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtcatttttggtttcccc-ctgtaaaata 704  Q
    ||||||||||||||| |||| |  |||||||||||||||||||||||||||||| ||||||||||    
T  51102370 aaagggttaatggtgctttacc--cctgtaatataggtcatttttggtttcccctctgtaaaata 51102308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 645 - 704
Target Start/End: Complemental strand, 15290044 - 15289985
Alignment:
Q  645 ggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    ||||||||||| |||| |  |||||||||||||||||||||||||| ||| |||||||||    
T  15290044 ggttaatggtgctttacccccctgtaatataggtcatttttggttttcccgtgtaaaata 15289985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 641 - 704
Target Start/End: Complemental strand, 55090303 - 55090241
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    ||||||||||||||| |||| |  ||||||||||||||||||||| |||| |||||||||||||    
T  55090303 aaagggttaatggtgctttaccc-cctgtaatataggtcattttttgttttcccctgtaaaata 55090241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 641 - 704
Target Start/End: Original strand, 23388722 - 23388783
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaaata 704  Q
    ||||||||||||||||||||||   ||||||||||||||| |||||| ||||||| |||||||||    
T  23388722 aaagggttaatggtgttttagc---ctgtaatataggtcattttttgttttccccttgtaaaata 23388783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 704
Target Start/End: Original strand, 40066701 - 40066765
Alignment:
Q  639 aaaaagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||| |||| |||||||||||||    
T  40066701 aaaatgggttaatggtgctttaccc-cctgtaatataggtcattttttgttttcccctgtaaaata 40066765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 643 - 704
Target Start/End: Original strand, 15096523 - 15096586
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttgg--tttccccctgtaaaata 704  Q
    ||||||||||||| |||| |  ||||||||||||||||||||| |  |||||||||||||||||    
T  15096523 agggttaatggtgctttacccccctgtaatataggtcattttttgtttttccccctgtaaaata 15096586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 647 - 704
Target Start/End: Original strand, 21655081 - 21655140
Alignment:
Q  647 ttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||| |  ||||||||||||||||||||||||||  | ||||||||||||    
T  21655081 ttaatggtgttttacccccctgtaatataggtcatttttggttttcctccctgtaaaata 21655140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 643 - 704
Target Start/End: Original strand, 25924040 - 25924103
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||| |||| |  ||||||||||||||||||||| ||||  ||||||||||||||    
T  25924040 agggttaatggtgctttacccccctgtaatataggtcattttttgttttcccccctgtaaaata 25924103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 643 - 695
Target Start/End: Original strand, 45333847 - 45333899
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggtttccccc 695  Q
    |||||||||||||||||| |  ||||||||||||||||||||| |||| ||||    
T  45333847 agggttaatggtgttttaccctcctgtaatataggtcattttttgttttcccc 45333899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 9797203 - 9797164
Alignment:
Q  665 cctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  9797203 cctgtaatataggtcattttaggttttcccctgtaaaata 9797164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 704
Target Start/End: Original strand, 16308105 - 16308167
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||| |||| |  ||||||||||||||||||||||||||  | ||||||||||||    
T  16308105 gggttaatggtgctttacccccctgtaatataggtcatttttggttttcctccctgtaaaata 16308167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 640 - 704
Target Start/End: Original strand, 17261021 - 17261086
Alignment:
Q  640 aaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||||| |||| |  ||||||||||||||||||||||||||  || |||||||||||    
T  17261021 aaaagggttaatggtgctttaccc-cctgtaatataggtcatttttggttttccctcctgtaaaata 17261086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 19301177 - 19301239
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaaata 704  Q
    ||||||||||||||||||| |  |||||||||||||||| |||||  |||||||||||||||||    
T  19301177 aagggttaatggtgttttaccc-cctgtaatataggtcattttttattttccccctgtaaaata 19301239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 701
Target Start/End: Original strand, 41747305 - 41747364
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaa 701  Q
    ||||||||||||| |||| |  |||||||||||||||| |||||| ||||||||||||||    
T  41747305 agggttaatggtgctttacccccctgtaatataggtcattttttgttttccccctgtaaa 41747364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 641 - 704
Target Start/End: Complemental strand, 13003957 - 13003892
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||||| |||| |  | ||||||||||||||||||| ||||  ||||||||||||||    
T  13003957 aaagggttaatggtgatttacccccttgtaatataggtcattttttgttttcccccctgtaaaata 13003892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 644 - 690
Target Start/End: Complemental strand, 13041739 - 13041693
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggttt 690  Q
    |||||||| |||||||| |  ||||||||||||||||||||||||||    
T  13041739 gggttaatagtgttttacccccctgtaatataggtcatttttggttt 13041693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 644 - 690
Target Start/End: Complemental strand, 13049816 - 13049770
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggttt 690  Q
    |||||||| |||||||| |  ||||||||||||||||||||||||||    
T  13049816 gggttaatagtgttttacccccctgtaatataggtcatttttggttt 13049770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 15096764 - 15096702
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcat-ttttggtttccccctgtaaaata 704  Q
    ||||||||||||| | || |  ||||||||||||||||| ||||| |||||||||||||||||    
T  15096764 agggttaatggtgctctacccccctgtaatataggtcattttttgttttccccctgtaaaata 15096702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 19111316 - 19111254
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    ||||||||| |||||||| |  |||||||||||||||| |||||| ||| |||||||||||||    
T  19111316 agggttaatagtgttttacccccctgtaatataggtcacttttggttttacccctgtaaaata 19111254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 638 - 704
Target Start/End: Complemental strand, 19757164 - 19757095
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacc-tgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||||||| |||| |  || ||||||||||||||||||| ||||  ||||||||||||||    
T  19757164 aaaaaagggttaatggtgctttaccccccctgtaatataggtcattttttgttttcccccctgtaaaata 19757095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 666 - 704
Target Start/End: Original strand, 21549771 - 21549809
Alignment:
Q  666 ctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||||| |||||||||||| |||||||||||||    
T  21549771 ctgtaatataggccatttttggttttcccctgtaaaata 21549809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 640 - 690
Target Start/End: Original strand, 29013402 - 29013452
Alignment:
Q  640 aaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt 690  Q
    |||||||||||||||| |||| |  ||||||||||||||||||| ||||||    
T  29013402 aaaagggttaatggtgctttatccccctgtaatataggtcatttctggttt 29013452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 645 - 704
Target Start/End: Original strand, 33887072 - 33887133
Alignment:
Q  645 ggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||| |||| |  ||||||||||||||||||||| ||||  ||||||||||||||    
T  33887072 ggttaatggtgctttacccccctgtaatataggtcattttttgttttcccccctgtaaaata 33887133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 39846638 - 39846577
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    ||||||||||||| |||| |  ||||||||||||||||||||||| ||| |||||||||||||    
T  39846638 agggttaatggtgctttaccc-cctgtaatataggtcatttttggtttttcccctgtaaaata 39846577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 638 - 701
Target Start/End: Complemental strand, 44512549 - 44512484
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaa 701  Q
    ||||| |||||||||||| |||| |  ||||||||||||||||||||| ||||  |||||||||||    
T  44512549 aaaaatgggttaatggtgctttacccccctgtaatataggtcattttttgttttcccccctgtaaa 44512484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 641 - 704
Target Start/End: Original strand, 53523389 - 53523453
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||||| |||| || | ||||||||||||||||||| ||||  ||||||||||||||    
T  53523389 aaagggttaatggtgctttacct-cttgtaatataggtcattttttgttttcccccctgtaaaata 53523453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 9650165 - 9650101
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttgg--tttccccctgtaaaata 704  Q
    |||||||||||||| |||| |  | ||||||||| |||||||||||  |||||||||||||||||    
T  9650165 aagggttaatggtgctttacccccatgtaatatatgtcatttttggtttttccccctgtaaaata 9650101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 690
Target Start/End: Original strand, 23526731 - 23526776
Alignment:
Q  645 ggttaatggtgttttagctacctgtaatataggtcatttttggttt 690  Q
    ||||||||||| |||| |  ||||||||||||||||||||||||||    
T  23526731 ggttaatggtgctttaccctcctgtaatataggtcatttttggttt 23526776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 24286150 - 24286214
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||| |||| |   |||||||||||||||||||| ||||  ||||||||||||||    
T  24286150 aagggttaatggtgctttaccccactgtaatataggtcattttttgttttcccccctgtaaaata 24286214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 35434131 - 35434068
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||| |||| |  ||||||||||||||||||||||||||  || |||||||||||    
T  35434131 aagggttaatggtgctttaccc-cctgtaatataggtcatttttggttttccctcctgtaaaata 35434068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 54012647 - 54012584
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||| |||| |  ||||||||||||||||||||||||||  | ||||||||||||    
T  54012647 aagggttaatggtgctttaccc-cctgtaatataggtcatttttggttttcctccctgtaaaata 54012584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 641 - 704
Target Start/End: Original strand, 149983 - 150047
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    ||||||||||||||| |||| |  ||||||||||||||||||||||| |||||||||||||||||    
T  149983 aaagggttaatggtgctttacccccctgtaatataggtcatttttggttttccccctgtaaaata 150047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 701
Target Start/End: Complemental strand, 150284 - 150224
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaa 701  Q
    ||||||||||||| ||||    ||||||||||||||||||||||||||  |||||||||||    
T  150284 agggttaatggtgctttacacccctgtaatataggtcatttttggttttcccccctgtaaa 150224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 21227017 - 21226954
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||||||| |  ||||||||||||||||||||||||||  ||||||||||||||    
T  21227017 agggttaatggtgttttacccccctgtaatataggtcatttttggttttcccccctgtaaaata 21226954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 308320 - 308384
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||| ||||||  ||||||||||| ||||||||||||||  ||||||||||||||    
T  308320 aagggttaatggtgctttagccccctgtaatatatgtcatttttggttttcccccctgtaaaata 308384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 640 - 704
Target Start/End: Complemental strand, 29239762 - 29239697
Alignment:
Q  640 aaaagggttaatggtgttttagctacctgtaatataggtcatttttgg--tttccccctgtaaaata 704  Q
    |||||||||||||||| |||| | || |||||||||||||||||||||  |||||||||||||||||    
T  29239762 aaaagggttaatggtgctttacccac-tgtaatataggtcatttttggtttttccccctgtaaaata 29239697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 638 - 704
Target Start/End: Complemental strand, 308623 - 308554
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacc-tgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||||||| |||| |  || ||||||||||||||||||||||||  ||||||||||||||    
T  308623 aaaaaagggttaatggtgctttaccccccctgtaatataggtcatttttggttttcccccctgtaaaata 308554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 31826465 - 31826403
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcat-ttttggtttccccctgtaaaata 704  Q
    |||||||||||||||||| |  ||||||||||||||||| ||||| ||| |||||||||||||    
T  31826465 agggttaatggtgttttacccccctgtaatataggtcattttttgtttttcccctgtaaaata 31826403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 665 - 702
Target Start/End: Original strand, 7922337 - 7922374
Alignment:
Q  665 cctgtaatataggtcatttttggtttccccctgtaaaa 702  Q
    |||||||||||||||||||||||||| |||||||||||    
T  7922337 cctgtaatataggtcatttttggttttcccctgtaaaa 7922374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 19376064 - 19376125
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    |||||||||||||| |||| |  ||||||||||||||||||||||| ||||||||| |||||||    
T  19376064 aagggttaatggtgctttacc--cctgtaatataggtcatttttggttttccccctataaaata 19376125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 21226724 - 21226785
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    |||||||||||||| |||| |  |||||||||||||||||||| || |||||||||||||||||    
T  21226724 aagggttaatggtgctttacc--cctgtaatataggtcattttgggttttccccctgtaaaata 21226785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 7017068 - 7017130
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt-ccccctgtaaaata 704  Q
    |||||||||||||| |||| |  ||||||||||||||||||||| |||| ||||||||||||||    
T  7017068 aagggttaatggtgctttaccc-cctgtaatataggtcattttttgtttcccccctgtaaaata 7017130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 704
Target Start/End: Complemental strand, 19418236 - 19418177
Alignment:
Q  645 ggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||||||||| |   || ||||||||||||||||| |||| |||||||||||||    
T  19418236 ggttaatggtgttttacccctctataatataggtcatttttagttttcccctgtaaaata 19418177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 704
Target Start/End: Complemental strand, 24602701 - 24602639
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||| |||| |  | ||||||||||||||||||||||||  ||||||||||||||    
T  24602701 gggttaatggtgctttacccccatgtaatataggtcatttttggttttcccccctgtaaaata 24602639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 33225440 - 33225502
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    |||||||||||||| |||| |  |||||||||||||| |||||||| |||||||||||||||||    
T  33225440 aagggttaatggtgctttaccc-cctgtaatataggttatttttgggtttccccctgtaaaata 33225502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 10366665 - 10366603
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    ||||||||| |||||||| |  | ||||||||||||||||||||| ||||||||| |||||||    
T  10366665 agggttaattgtgttttacccccttgtaatataggtcatttttggttttccccctataaaata 10366603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 667 - 704
Target Start/End: Original strand, 25567724 - 25567762
Alignment:
Q  667 tgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  25567724 tgtaatataggtcatttttggttttccccctgtaaaata 25567762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 31733346 - 31733281
Alignment:
Q  642 aagggttaatggtgttttagctacct-gtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||| |||| |  ||| |||||||||||||||||||||||  ||||||||||||||    
T  31733346 aagggttaatggtgctttaccccccttgtaatataggtcatttttggttttcccccctgtaaaata 31733281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 704
Target Start/End: Original strand, 2181317 - 2181377
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtca-tttttggtttccccctgtaaaata 704  Q
    ||||||||||||||||| |  |||||||||||||||| |||||| ||||||| |||||||||    
T  2181317 gggttaatggtgttttaccc-cctgtaatataggtcattttttgttttccccatgtaaaata 2181377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 641 - 704
Target Start/End: Complemental strand, 2181606 - 2181544
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtcatttttggttt-ccccctgtaaaata 704  Q
    ||||||||||||||| |||| |  |||||||||||||| |||||| |||| ||||||||||||||    
T  2181606 aaagggttaatggtgctttacc--cctgtaatataggttattttttgttttccccctgtaaaata 2181544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 704
Target Start/End: Original strand, 11336648 - 11336716
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttgg--tttccccctgtaaaata 704  Q
    |||| |||||||||||||||||| |  | ||||||||||||||||||| |  |||| ||||||||||||    
T  11336648 aaaatagggttaatggtgttttacccccttgtaatataggtcattttttgtttttctccctgtaaaata 11336716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 21544128 - 21544192
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||| |||||||| |  |||||||||||||||||||  |||||  ||||||||||||||    
T  21544128 aagggttaatagtgttttacccccctgtaatataggtcatttccggttttaccccctgtaaaata 21544192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 22362616 - 22362680
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||| |||||||| || | |||||||||||||||||  |||||  ||||||||||||||    
T  22362616 aagggttaatagtgttttacctccgtgtaatataggtcatttccggttttaccccctgtaaaata 22362680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 704
Target Start/End: Original strand, 27967466 - 27967526
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcat-ttttggtttccccctgtaaaata 704  Q
    |||||||||||| |||| |  ||||||||||||||||| ||||| |||||||||||||||||    
T  27967466 gggttaatggtgctttaccc-cctgtaatataggtcatcttttgttttccccctgtaaaata 27967526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 704
Target Start/End: Complemental strand, 27967760 - 27967696
Alignment:
Q  640 aaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt-ccccctgtaaaata 704  Q
    |||| ||||||||||| ||||||  |||||||||||| |||||||| |||| ||||||||||||||    
T  27967760 aaaatggttaatggtgctttagcc-cctgtaatatagatcattttttgttttccccctgtaaaata 27967696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 704
Target Start/End: Complemental strand, 33352672 - 33352612
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcat-ttttggtttccccctgtaaaata 704  Q
    |||||||||||| |||| |  ||||||||||||||||| ||||| |||||||||||||||||    
T  33352672 gggttaatggtgctttaccc-cctgtaatataggtcattttttgttttccccctgtaaaata 33352612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 668 - 704
Target Start/End: Original strand, 33552569 - 33552606
Alignment:
Q  668 gtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    |||||||||||||||||||| |||||||||||||||||    
T  33552569 gtaatataggtcatttttggttttccccctgtaaaata 33552606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 644 - 694
Target Start/End: Original strand, 43412822 - 43412872
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggtttcccc 694  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  43412822 gggttaatggtgttttacccccctgtaatataggtcatttttggtttcccc 43412872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 638 - 696
Target Start/End: Complemental strand, 43413124 - 43413066
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccct 696  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||| |||| |||||    
T  43413124 aaaaaagggttaatggtgttttaccctcctgtaatataggtcattttttgttttcccct 43413066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 704
Target Start/End: Complemental strand, 51810047 - 51809986
Alignment:
Q  645 ggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||||| || ||||||||||||||||||||| ||||  ||||||||||||||    
T  51810047 ggttaatggtgttttacctccctgtaatataggtcattttttgttttcccccctgtaaaata 51809986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 15961801 - 15961737
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||| |||| |  ||||||||||||||||||||||||||  ||||||||||||||    
T  15961801 aagggttaatggtgctttacccccctgtaatataggtcatttttggttttcccccctgtaaaata 15961737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 638 - 704
Target Start/End: Complemental strand, 24730267 - 24730199
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||||||| |||| |  |||||||||||||||| |||||||||  ||||||||||||||    
T  24730267 aaaaaagggttaatggtgctttacccccctgtaatataggtcacttttggttttcccccctgtaaaata 24730199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 638 - 704
Target Start/End: Original strand, 46208193 - 46208261
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacctgtaatataggtcatttttgg--tttccccctgtaaaata 704  Q
    |||| ||||||||||||| |||| || ||||||||||||||||||||| |  |||||||||||||||||    
T  46208193 aaaatagggttaatggtgctttacctccctgtaatataggtcattttttgtttttccccctgtaaaata 46208261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 50721986 - 50721922
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||| |||| |  ||||||||||||||||||||||||||  ||||||||||||||    
T  50721986 aagggttaatggtgctttacccccctgtaatataggtcatttttggttttcccccctgtaaaata 50721922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 644 - 695
Target Start/End: Original strand, 12277188 - 12277238
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggtttccccc 695  Q
    ||||||||||||||||| || |||||||||||||||||||||||||| ||||    
T  12277188 gggttaatggtgttttacct-cctgtaatataggtcatttttggttttcccc 12277238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 52413119 - 52413181
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt-ccccctgtaaaata 704  Q
    |||||||||||||| |||| |  |||||||||||||||||||||||||| ||||||||||||||    
T  52413119 aagggttaatggtgctttaccc-cctgtaatataggtcatttttggtttcccccctgtaaaata 52413181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 645 - 704
Target Start/End: Complemental strand, 6607464 - 6607404
Alignment:
Q  645 ggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||||| || ||||||||||| ||||||||||||||  ||||||||||||||    
T  6607464 ggttaatggtgttttacct-cctgtaatatatgtcatttttggttttcccccctgtaaaata 6607404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 12277513 - 12277449
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||| |||| |  ||||||||||||||||||||||||||   |||||||||||||    
T  12277513 aagggttaatggtgctttacccccctgtaatataggtcatttttggttttctcccctgtaaaata 12277449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 16555587 - 16555525
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||| |||| || ||||||||||||||||||||| ||||  ||||||||||||||    
T  16555587 agggttaatggtgcttta-ctccctgtaatataggtcattttttgttttcccccctgtaaaata 16555525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 643 - 704
Target Start/End: Original strand, 24730055 - 24730118
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttgg--tttccccctgtaaaata 704  Q
    ||||||||||||| |||| |  |||||||||||||||||||||||  |||| ||||||||||||    
T  24730055 agggttaatggtgctttacccccctgtaatataggtcatttttggtttttctccctgtaaaata 24730118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 639 - 704
Target Start/End: Original strand, 35384220 - 35384287
Alignment:
Q  639 aaaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||||||| |||| |  |||||||||||||||||||||  |||  ||||||||||||||    
T  35384220 aaaaagggttaatggtgctttacccccctgtaatataggtcattttttattttcccccctgtaaaata 35384287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 704
Target Start/End: Original strand, 24465903 - 24465965
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||| |||| |  ||||||||||||||||||||| ||||  ||||||||||||||    
T  24465903 gggttaatggtgctttatcaccctgtaatataggtcattttttgttttcccccctgtaaaata 24465965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 39160432 - 39160494
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    |||||||||||||| |||| |  ||||| ||||||||||||||||| |||||||||||||||||    
T  39160432 aagggttaatggtgctttaccc-cctgtcatataggtcatttttggttttccccctgtaaaata 39160494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 641 - 696
Target Start/End: Complemental strand, 46584121 - 46584066
Alignment:
Q  641 aaagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccct 696  Q
    ||||||||||| |||||||| || | ||||||||||||||||||| |||| |||||    
T  46584121 aaagggttaatagtgttttaccttcttgtaatataggtcattttttgttttcccct 46584066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 704
Target Start/End: Original strand, 51809756 - 51809817
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttgg--tttccccctgtaaaata 704  Q
    ||||||||||||||||| |  |||||||||||||| ||||||||  |||||||||||||||||    
T  51809756 gggttaatggtgttttaccc-cctgtaatataggttatttttggtttttccccctgtaaaata 51809817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 644 - 690
Target Start/End: Original strand, 972841 - 972886
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggttt 690  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  972841 gggttaatggtgttttaccc-cctgtaatataggtcatttttggttt 972886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 647 - 704
Target Start/End: Complemental strand, 15880023 - 15879965
Alignment:
Q  647 ttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    ||||||||| |||| |  ||||||||||||||||||||||| |||||| ||||||||||    
T  15880023 ttaatggtgctttacccccctgtaatataggtcatttttggttttccctctgtaaaata 15879965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 24004809 - 24004748
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||||||| |||| |  | ||||||||||||||||||| |||| |||||||||||||    
T  24004809 aagggttaatggtgctttaccc-cttgtaatataggtcattttttgttttcccctgtaaaata 24004748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 643 - 704
Target Start/End: Original strand, 25170955 - 25171014
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||||||||||| |  |||||||||||||||||||||  |||| |||| |||||||    
T  25170955 agggttaatggtgttttacc--cctgtaatataggtcattttttttttctccctataaaata 25171014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 639 - 700
Target Start/End: Complemental strand, 27815287 - 27815225
Alignment:
Q  639 aaaaagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaa 700  Q
    ||||||||||||| ||| |||| || |||||||| |||||||||| ||| |||||||||||||    
T  27815287 aaaaagggttaatagtgctttaactccctgtaatttaggtcatttctggttttccccctgtaa 27815225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 642 - 703
Target Start/End: Complemental strand, 37356327 - 37356265
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaat 703  Q
    |||||||||||||| |||| |  | ||||||||||||||||| ||| ||||||||||||||||    
T  37356327 aagggttaatggtgctttaccctcttgtaatataggtcatttatggttttccccctgtaaaat 37356265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 643 - 704
Target Start/End: Original strand, 50721720 - 50721781
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    ||||||||||||| |||| |  |||||| |||||||||||||||| |||||||||||||||||    
T  50721720 agggttaatggtgctttacccccctgta-tataggtcatttttggttttccccctgtaaaata 50721781  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 639 - 704
Target Start/End: Complemental strand, 50880118 - 50880053
Alignment:
Q  639 aaaaagggttaatggtgttttagctacctgtaatataggtcatttttggttt-ccccctgtaaaata 704  Q
    |||||||||||||||||||||| |  ||||||||||| ||||||||| |||| ||| ||||||||||    
T  50880118 aaaaagggttaatggtgtttta-ccccctgtaatataagtcattttttgtttaccctctgtaaaata 50880053  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 703
Target Start/End: Complemental strand, 14910134 - 14910073
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaat 703  Q
    |||||||||| ||||||||    |||||||||||||||||||| ||||| ||||| ||||||    
T  14910134 aagggttaatagtgttttactcccctgtaatataggtcattttcggttttcccctataaaat 14910073  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 700
Target Start/End: Complemental strand, 17746536 - 17746480
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaa 700  Q
    |||||||||||||||||| |  ||| |||||||||||||||| ||||| |||||||||    
T  17746536 agggttaatggtgttttaccc-cctataatataggtcattttcggttttcccctgtaa 17746480  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 696
Target Start/End: Original strand, 23484711 - 23484764
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggtttccccct 696  Q
    |||||||||||||||||| |   ||||||||||||||||||| ||||| |||||    
T  23484711 agggttaatggtgttttacccctctgtaatataggtcattttcggttttcccct 23484764  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 26190728 - 26190792
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||| |||||||| |  | |||||||||||||||||| |||||  ||||||||||||||    
T  26190728 aagggttaatagtgttttacccccttgtaatataggtcattttcggttttaccccctgtaaaata 26190792  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 667 - 704
Target Start/End: Original strand, 26486556 - 26486593
Alignment:
Q  667 tgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  26486556 tgtaatataggtcattttttgttttcccctgtaaaata 26486593  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 665 - 702
Target Start/End: Complemental strand, 47839998 - 47839961
Alignment:
Q  665 cctgtaatataggtcatttttggtttccccctgtaaaa 702  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  47839998 cctgtaatataggtcattttttgttttcccctgtaaaa 47839961  T

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Target: scaffold0597 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 644 - 704
Target Start/End: Original strand, 6269 - 6330
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttgg-tttccccctgtaaaata 704  Q
    |||||||||||| |||| || |||||||||||| |||||||||| |||||||||||||||||    
T  6269 gggttaatggtgatttacctccctgtaatatagctcatttttggttttccccctgtaaaata 6330  T

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Target: scaffold0111 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 632 - 704
Target Start/End: Complemental strand, 29752 - 29680
Alignment:
Q  632 tagtagaaaaaagggttaatggtgttttagctacctgtaatataggtcat-ttttggtttccccctgtaaaata 704  Q
    ||||| ||| ||||||||||||||||||| |  ||||||||||||||||| ||||| |||||||||||||||||    
T  29752 tagtaaaaataagggttaatggtgttttaccc-cctgtaatataggtcattttttgttttccccctgtaaaata 29680  T

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Target: scaffold1797 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold1797
Description:

Target: scaffold1797; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 704
Target Start/End: Complemental strand, 737 - 674
Alignment:
Q  643 agggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||||||| |  ||||||||||||||||||||||||||   |||||||||||||    
T  737 agggttaatggtgttttacccccctgtaatataggtcatttttggttttctcccctgtaaaata 674  T

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Target: scaffold1797; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 704
Target Start/End: Original strand, 470 - 534
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||| |||| |  ||||||||||||||||||||| ||||  ||||||||||||||    
T  470 aagggttaatggtgctttatccccctgtaatataggtcattttttgtttacccccctgtaaaata 534  T

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Target: scaffold0384 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 665 - 702
Target Start/End: Complemental strand, 4464 - 4427
Alignment:
Q  665 cctgtaatataggtcatttttggtttccccctgtaaaa 702  Q
    |||||||||||||||||||| |||||||||||||||||    
T  4464 cctgtaatataggtcattttcggtttccccctgtaaaa 4427  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000006; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 644 - 704
Target Start/End: Original strand, 2756 - 2816
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    |||||||||||| |||| |  |||||||||||||||||||||  ||| |||||||||||||    
T  2756 gggttaatggtgctttacccccctgtaatataggtcattttttattttcccctgtaaaata 2816  T

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Target: scaffold0025; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 638 - 704
Target Start/End: Complemental strand, 3053 - 2984
Alignment:
Q  638 aaaaaagggttaatggtgttttagctacc--tgtaatataggtcatttttggtttc-cccctgtaaaata 704  Q
    |||| |||||||||||||||||| |  ||  ||||||||| ||||||||||||||| |||||||||||||    
T  3053 aaaatagggttaatggtgttttacccccccttgtaatataagtcatttttggtttcccccctgtaaaata 2984  T

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Target: scaffold0148 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 35041 - 34978
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcat-ttttggtttccccctgtaaaata 704  Q
    |||||||||||||  |||| |  ||||||||||||||||| ||||| |||||||||||||||||    
T  35041 aagggttaatggtactttacccccctgtaatataggtcattttttgttttccccctgtaaaata 34978  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 704
Target Start/End: Complemental strand, 149677 - 149615
Alignment:
Q  644 gggttaatggtgttttagctacctgtaatataggtcatttttgg--tttccccctgtaaaata 704  Q
    |||||||||||| |||| |  |||||||||||||||||||||||  || ||||||||||||||    
T  149677 gggttaatggtgctttacccccctgtaatataggtcatttttggatttcccccctgtaaaata 149615  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 53559 - 53518
Alignment:
Q  665 cctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  53559 cctgtaatataggtcatttttggttttcccccctgtaaaata 53518  T

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Target: scaffold0192 (Bit Score: 30; Significance: 0.0000003; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 704
Target Start/End: Original strand, 14210 - 14270
Alignment:
Q  646 gttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||| |||| |  ||||||||||||||||||||||||||  | ||||||||||||    
T  14210 gttaatggtgctttacccccctgtaatataggtcatttttggttttcctccctgtaaaata 14270  T

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Target: scaffold0192; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 704
Target Start/End: Complemental strand, 14506 - 14443
Alignment:
Q  642 aagggttaatggtgttttagctacctgtaatataggtcatttttggttt--ccccctgtaaaata 704  Q
    |||||||||||||| |||| |  |||||||||||||||||||||| |||  ||||||||||||||    
T  14506 aagggttaatggtgctttaccc-cctgtaatataggtcatttttgattttcccccctgtaaaata 14443  T

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Target: scaffold0092 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 667 - 704
Target Start/End: Complemental strand, 44618 - 44581
Alignment:
Q  667 tgtaatataggtcatttttggtttccccctgtaaaata 704  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  44618 tgtaatataggtcatttctggtttcctcctgtaaaata 44581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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