View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7688_low_18 (Length: 295)
Name: NF7688_low_18
Description: NF7688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7688_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 12417999 - 12418264
Alignment:
| Q |
13 |
aatatataactaggacgaaagataagaaggactacttgattgaattttatatttcctaatttaggcctttcaattccctttgaatatttaaattaggaac |
112 |
Q |
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| T |
12417999 |
aatatataactaggacgaaagataagaaggactacttgattgaattttatatttcctaatttaggcctttcaattccctttgaatatttaaattaggaac |
12418098 |
T |
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| Q |
113 |
ccctaatcccatattaggttcttaaactccatgccatgtactttttgacatagctatttaatcgaagttttaaaatctacatcttatactatataaggca |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12418099 |
ccctaatcccatattaggttcttaaactccatgccatgtactttttgacatagctatttaatcgaagttttaaaatctacatcttatactatataaggca |
12418198 |
T |
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| Q |
213 |
gacaaggtacattcaattttaaacaaggcacacaaggtatcaaccacatgaataaaatatagctag |
278 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12418199 |
gacaaggtacattcaatattaaacaaggcacacaaggtatcaaccacatgaataaaatatagctag |
12418264 |
T |
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