View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7688_low_20 (Length: 271)

Name: NF7688_low_20
Description: NF7688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7688_low_20
NF7688_low_20
[»] chr1 (7 HSPs)
chr1 (1-260)||(4651863-4652122)
chr1 (31-260)||(2987884-2988116)
chr1 (97-257)||(35250110-35250270)
chr1 (31-199)||(11839368-11839536)
chr1 (15-196)||(17993868-17994052)
chr1 (176-227)||(16577378-16577429)
chr1 (178-225)||(28395004-28395051)
[»] chr7 (4 HSPs)
chr7 (13-260)||(38485639-38485888)
chr7 (14-212)||(9349841-9350034)
chr7 (65-260)||(46133085-46133273)
chr7 (91-183)||(12481041-12481132)
[»] chr5 (6 HSPs)
chr5 (31-260)||(31721761-31721990)
chr5 (61-256)||(36979004-36979190)
chr5 (90-258)||(39024268-39024437)
chr5 (81-151)||(31742359-31742429)
chr5 (63-136)||(24436020-24436095)
chr5 (204-260)||(39184126-39184182)
[»] chr2 (6 HSPs)
chr2 (14-258)||(18681151-18681400)
chr2 (63-258)||(12793530-12793725)
chr2 (61-260)||(31902219-31902411)
chr2 (31-185)||(9926373-9926528)
chr2 (138-234)||(915328-915424)
chr2 (82-167)||(29044674-29044760)
[»] chr8 (6 HSPs)
chr8 (56-257)||(35062544-35062744)
chr8 (14-226)||(10552385-10552595)
chr8 (30-260)||(41791029-41791261)
chr8 (13-248)||(30235875-30236112)
chr8 (61-260)||(32945503-32945700)
chr8 (201-260)||(17720644-17720703)
[»] chr3 (4 HSPs)
chr3 (5-230)||(30935127-30935356)
chr3 (13-260)||(1652634-1652883)
chr3 (71-173)||(34574847-34574948)
chr3 (204-260)||(823375-823431)
[»] chr6 (6 HSPs)
chr6 (63-245)||(12794203-12794385)
chr6 (56-260)||(26215811-26216016)
chr6 (30-99)||(27774836-27774905)
chr6 (201-259)||(9224127-9224185)
chr6 (129-257)||(26534588-26534709)
chr6 (90-187)||(21266263-21266360)
[»] chr4 (3 HSPs)
chr4 (121-260)||(43373952-43374091)
chr4 (90-256)||(19432130-19432296)
chr4 (163-260)||(35800573-35800670)


Alignment Details
Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 4652122 - 4651863
Alignment:
Q  1 aaaaaaccatgtgatcaacacccataggtacaacacccaacaaactaaacatcctcctacaactgactcctatagttaccaaccactgaaaaaacgacat 100  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4652122 aaaaaaccctgtgatcaacacccataagtacaacacccaacaaactaaacatcctcctacaactgactcctatagttaccaaccactgaaaaaacgacat 4652023  T
Q  101 ccaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccgaagaactccttc 200  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4652022 ctaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtccccatcaccaacaatgagccacatccgaagaactccttc 4651923  T
Q  201 tctaaagatcattcagcttccaccaccgcgcaacatctagtccaccgaaggaacaccaaa 260  Q
    |||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  4651922 tctaaagatcattcagcttccaccaccgcgcaacctccggtccaccgaaggaacaccaaa 4651863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 31 - 260
Target Start/End: Original strand, 2987884 - 2988116
Alignment:
Q  31 caacacccaacaaactaaacatcctcc--tacaactgactcctatagttaccaaccactgaaaaaac-gacatccaaaacactcgtcaccacaactcacc 127  Q
    ||||||||| |||| ||||||||  ||  || ||||||||| |||| |||||||||||||||||||  ||||| || |||||||||| | ||  | ||||    
T  2987884 caacacccaccaaaataaacatcacccactaaaactgactcatatacttaccaaccactgaaaaaaatgacattcataacactcgtcgcaacttcgcacc 2987983  T
Q  128 tcaaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccgaagaactccttctctaaagatcattcagcttccaccacc 227  Q
    || ||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2987984 tctaaagaacacccttgtaaaagagaaccatgtcctcatcaccaacaccgagccacatccgaagaactccttccctaaagatcattcagcttccaccacc 2988083  T
Q  228 gcgcaacatctagtccaccgaaggaacaccaaa 260  Q
    || |||| ||  ||| | |||||||||||||||    
T  2988084 gcacaacctccggtctatcgaaggaacaccaaa 2988116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 97 - 257
Target Start/End: Original strand, 35250110 - 35250270
Alignment:
Q  97 acatccaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccgaagaactc 196  Q
    ||||||| || ||||||| |||| |||||||||||||||||| ||||||||||||||| | ||||||||||  |||||||| ||||| ||||||||||||    
T  35250110 acatccataaaactcgtcgccactactcacctcaaaagaacatccttgtaaaagagaatccagtcctcatcttcaacaatgtgccacctccgaagaactc 35250209  T
Q  197 cttctctaaagatcattcagcttccaccaccgcgcaacatctagtccaccgaaggaacacc 257  Q
    |||||||||||||||||||||||||||||||||| ||| ||| |||  |||||||||||||    
T  35250210 cttctctaaagatcattcagcttccaccaccgcgtaacctctggtcagccgaaggaacacc 35250270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 11839536 - 11839368
Alignment:
Q  31 caacacccaacaaactaaacatc--ctcctacaactgactcctatagttaccaaccactgaaaaaacgacatccaaaacactcgtcaccacaactcacct 128  Q
    ||||||||| |||| ||||||||  |||||| |||||| ||||| | ||||| |||||| ||||||| ||||||| ||||||| |  |||| |||||||     
T  11839536 caacacccatcaaaataaacatcatctcctaaaactgattcctaaacttaccgaccact-aaaaaacaacatccataacactctttgccaccactcaccc 11839438  T
Q  129 caaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccgaagaactcctt 199  Q
    |||||||||| | ||||||||||||||  | |||||||| ||||||  ||||||||||| |||||||||||    
T  11839437 caaaagaacatc-ttgtaaaagagaactcaatcctcatccccaacatcgagccacatccaaagaactcctt 11839368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 17993868 - 17994052
Alignment:
Q  15 tcaacacccataggtacaacacccaacaaactaaacatcctcc--tacaactgactcctatagttaccaaccactgaaaaaa-cgacatccaaaacactc 111  Q
    |||||||||||| | |||||||||| |||| ||||||||  ||  || || ||| ||||| | ||||| ||||||||||||| |||||  || |||| ||    
T  17993868 tcaacacccataaggacaacacccaccaaaataaacatcaccccttaaaagtgattcctaaacttacctaccactgaaaaaaacgacactcataacagtc 17993967  T
Q  112 gtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccgaagaactc 196  Q
     ||  |||  |||||| ||||||||||||||||||| || ||||| | |||||||||||||||  ||||||||||||||||||||    
T  17993968 atcgtcactgctcaccccaaaagaacacccttgtaatagggaacccaatcctcatcaccaacatcgagccacatccgaagaactc 17994052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 16577429 - 16577378
Alignment:
Q  176 tgagccacatccgaagaactccttctctaaagatcattcagcttccaccacc 227  Q
    ||||||||||||||| | |||||  || ||||||||||||||||||||||||    
T  16577429 tgagccacatccgaaaagctcctattccaaagatcattcagcttccaccacc 16577378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 28395004 - 28395051
Alignment:
Q  178 agccacatccgaagaactccttctctaaagatcattcagcttccacca 225  Q
    ||||| || ||||||||||||| ||||||||||||||| |||||||||    
T  28395004 agccaaattcgaagaactccttttctaaagatcattcaccttccacca 28395051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 169; Significance: 1e-90; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 13 - 260
Target Start/End: Complemental strand, 38485888 - 38485639
Alignment:
Q  13 gatcaacacccataggtacaacacccaacaaactaaacatcctcctacaactgactcctatagttaccaaccactgaaaaaac---gacatccaaaacac 109  Q
    |||||||||||||| |||||||| ||| ||||||||||||| || || ||||||||||||||||||||||||||||||||||    ||||||||||||||    
T  38485888 gatcaacacccataagtacaacatccagcaaactaaacatcttc-taaaactgactcctatagttaccaaccactgaaaaaaaaatgacatccaaaacac 38485790  T
Q  110 tcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccgaagaactccttctctaaagat 209  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  38485789 tcgtcgccacaactcacctcaaaagaacacctttgtaaaagagaaccaagtccttatcaccaacaatgagccacatctgaagaactccttctctaaagat 38485690  T
Q  210 cattcagcttccaccaccgcgcaacatctagtccaccgaaggaacaccaaa 260  Q
    ||||||||||||||||||| ||||| ||  ||||| |||||||||||||||    
T  38485689 cattcagcttccaccaccgtgcaacctccggtccatcgaaggaacaccaaa 38485639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 212
Target Start/End: Complemental strand, 9350034 - 9349841
Alignment:
Q  14 atcaacacccataggtacaacacccaacaaactaaacatcctcctacaactgactcctatagttaccaaccactgaaaaaacgacatccaaaacactcgt 113  Q
    |||||| |||||| | |||||||||| |||| ||||||||| |||| ||||    |||||| |||||||||||| | ||||||||||||| |||||||||    
T  9350034 atcaacccccataaggacaacacccaccaaaataaacatccccctaaaact----cctatacttaccaaccact-agaaaacgacatccataacactcgt 9349940  T
Q  114 caccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccgaagaactccttctctaaagatcat 212  Q
    | |||| ||||||| |||||||||||||||||||||||||||  | | |||||||||||||  ||||||||||||||||||| |||||||||| |||||    
T  9349939 cgccactactcaccccaaaagaacacccttgtaaaagagaacacaatactcatcaccaacaccgagccacatccgaagaacttcttctctaaatatcat 9349841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 65 - 260
Target Start/End: Original strand, 46133085 - 46133273
Alignment:
Q  65 gactcctatagttaccaaccactgaaaaaacgacatccaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtcctc 164  Q
    ||||| |||| | ||||||||||||||||||||||||||||||||||||  |||| |||||||       |||||| ||||||||||||||| |||| ||    
T  46133085 gactcttatactaaccaaccactgaaaaaacgacatccaaaacactcgttgccactactcacca------aacacc-ttgtaaaagagaacccagtcatc 46133177  T
Q  165 atcaccaacaatgagccacatccgaagaactccttctctaaagatcattcagcttccaccaccgcgcaacatctagtccaccgaaggaacaccaaa 260  Q
    ||||||||||  ||| ||||||| |||||||| || ||||||||||| ||||||||| ||||| |||||| ||  |||||||||||||||||||||    
T  46133178 atcaccaacaccgagtcacatccaaagaactctttatctaaagatcaatcagcttcccccaccacgcaacctccggtccaccgaaggaacaccaaa 46133273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 12481132 - 12481041
Alignment:
Q  91 aaaacgacatccaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccac 183  Q
    |||||| |||||| ||||| | ||  ||| ||||||| |||||||||||| |||||||||| |||| |||||||| |||| | | ||||||||    
T  12481132 aaaacggcatccataacacccatcgtcactactcaccccaaaagaacacctttgtaaaagaaaacc-agtcctcaacacccaaactgagccac 12481041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 142; Significance: 1e-74; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 31 - 260
Target Start/End: Complemental strand, 31721990 - 31721761
Alignment:
Q  31 caacacccaacaaactaaacatcctcctacaactgactcctatagttaccaaccactgaaaaaacgacatccaaaacactcgtcaccacaactcacctca 130  Q
    ||||||||| |||| ||||||||  |||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||    
T  31721990 caacacccaccaaaataaacatcaccctaaaactgactcctatacttaccaaccactgaaaaaacgacatccataacactcgtcgccactactcacctca 31721891  T
Q  131 aaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccgaagaactccttctctaaagatcattcagcttccaccaccgcg 230  Q
    ||| |||||||||||||||||||||  ||||||| |||||||||  ||||||||||| |||||||| |||||||||||||| ||| ||||||||||||||    
T  31721890 aaaaaacacccttgtaaaagagaactcagtcctcgtcaccaacatcgagccacatccaaagaactcattctctaaagatcaatcaacttccaccaccgcg 31721791  T
Q  231 caacatctagtccaccgaaggaacaccaaa 260  Q
    |||||||  |||||| ||||||||||||||    
T  31721790 caacatccggtccactgaaggaacaccaaa 31721761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 256
Target Start/End: Complemental strand, 36979190 - 36979004
Alignment:
Q  61 aactgactcctatagttaccaaccactgaaaaaacgacatccaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagt 160  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||||| ||| |||| ||||||||      ||||||  |||||||||||||| |||    
T  36979190 aactgactcttatacttaccaaccactgaaaaaacaacatccaaaacactggtcgccactactcacct------aacacc--tgtaaaagagaacctagt 36979099  T
Q  161 cctcatcaccaacaatgagccacatccgaagaactccttctctaaagatcattcagcttccaccaccgcgcaacatctagtccaccgaaggaacac 256  Q
    ||| || |||||||   |||||||||| |||||||| |||| ||| ||||||||||||||  ||||| || ||||||  |||||||||||| ||||    
T  36979098 ccttattaccaacaccaagccacatccaaagaactcattctttaatgatcattcagcttctcccaccacgtaacatc-cgtccaccgaagggacac 36979004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 258
Target Start/End: Original strand, 39024268 - 39024437
Alignment:
Q  90 aaaaacgacatccaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaag-agaaccaagtcctcatcaccaacaatgagccacatccg 188  Q
    |||||||| ||||| ||||||| ||  ||| |||||||  ||||||||||||||||||||| || ||| |||||||||||||||   | | ||||||| |    
T  39024268 aaaaacgatatccataacactcatcgtcactactcaccctaaaagaacacccttgtaaaagaagcacccagtcctcatcaccaaatctaaaccacatcgg 39024367  T
Q  189 aagaactccttctctaaagatcattcagcttccaccaccgcgcaacatctagtccaccgaaggaacacca 258  Q
    ||| ||||||| |||| ||||||||||  |||||||||| | |||| || | ||||||||| ||||||||    
T  39024368 aaggactccttttctacagatcattcaagttccaccacctctcaacttccaatccaccgaaagaacacca 39024437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 31742429 - 31742359
Alignment:
Q  81 aaccactgaaaaaacgacatccaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaaga 151  Q
    ||||||||||||||||| ||||| ||||| | || |||| ||||||| |||||||||||||||||||||||    
T  31742429 aaccactgaaaaaacgatatccataacacccatcgccactactcaccccaaaagaacacccttgtaaaaga 31742359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 24436095 - 24436020
Alignment:
Q  63 ctgactcctatagttaccaaccactgaaaaaa--cgacatccaaaacactcgtcaccacaactcacctcaaaagaa 136  Q
    |||||||||| | |||||||||||||||||||  ||||||| | |||||||||| |||| ||||| || |||||||    
T  24436095 ctgactcctaaacttaccaaccactgaaaaaaaacgacatctataacactcgtcgccactactcatcttaaaagaa 24436020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 39184126 - 39184182
Alignment:
Q  204 aaagatcattcagcttccaccaccgcgcaacatctagtccaccgaaggaacaccaaa 260  Q
    |||||||| ||||||||||| ||| | |||| ||| |||||||||| ||||||||||    
T  39184126 aaagatcaatcagcttccactacctcacaacctctggtccaccgaaagaacaccaaa 39184182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 5e-74; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 18681400 - 18681151
Alignment:
Q  14 atcaacacccataggtacaacacccaacaaactaaacatc--ctcctacaactgactcctatagttaccaaccactgaaaaaa---cgacatccaaaaca 108  Q
    ||||||||||||| | |||||||||   ||| ||||||||  | |||| |||||||||||||| |||||||||||| ||||||   ||||||||||||||    
T  18681400 atcaacacccataagaacaacaccctctaaaataaacatcaccccctaaaactgactcctatacttaccaaccactaaaaaaaacacgacatccaaaaca 18681301  T
Q  109 ctcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccgaagaactccttctctaaaga 208  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  18681300 ctcgtcgccaccactcacctcaaaagaacacccttgtaaaagagaacctagtcctcatcaccaacattgagccacatccgaagagctccttctctaaaga 18681201  T
Q  209 tcattcagcttccaccaccgcgcaacatctagtccaccgaaggaacacca 258  Q
    ||||||||||| |||||||| ||||| |||  |||||| |||||||||||    
T  18681200 tcattcagctttcaccaccgtgcaacctctgatccaccaaaggaacacca 18681151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 63 - 258
Target Start/End: Original strand, 12793530 - 12793725
Alignment:
Q  63 ctgactcctatagttaccaaccactgaaaaaa-cgacatccaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtc 161  Q
    |||||||||||  | |||| ||||| |||||| ||||||  | | ||||||||||||| |||||||||||||||||||| ||||||||||||||  | |     
T  12793530 ctgactcctatgctaaccagccactaaaaaaagcgacataaatatcactcgtcaccactactcacctcaaaagaacacctttgtaaaagagaacttactt 12793629  T
Q  162 ctcatcaccaacaatgagccacatccgaagaactccttctctaaagatcattcagcttccaccaccgcgcaacatctagtccaccgaaggaacacca 258  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||  ||||| |||||||||||||    
T  12793630 ctcatcaccaacaccgagccacatccgaagaactccttctctaaagatcattcagcttccaccaccgcacaacctccggtcca-cgaaggaacacca 12793725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 61 - 260
Target Start/End: Original strand, 31902219 - 31902411
Alignment:
Q  61 aactgactcctatagttaccaaccactgaaaaaacgacatccaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagt 160  Q
    |||||||||||||| | |||||||| |||||||||||||||  ||||||||||| |||| ||| |||      ||||||| |||||||||||||||||||    
T  31902219 aactgactcctatactaaccaaccagtgaaaaaacgacatctgaaacactcgtcgccactactaacc------gaacacc-ttgtaaaagagaaccaagt 31902311  T
Q  161 cctcatcaccaacaatgagccacatccgaagaactccttctctaaagatcattcagcttccaccaccgcgcaacatctagtccaccgaaggaacaccaaa 260  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||  ||||||| |||||||| ||||    
T  31902312 cctcaacaccaacactgagtcacatccgaagaactccttctctaaagatcattcagcttcccccaccacgcaacctccggtccaccaaaggaacatcaaa 31902411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 185
Target Start/End: Complemental strand, 9926528 - 9926373
Alignment:
Q  31 caacacccaacaaactaaacatc---ctcctacaactgactcctatagttaccaaccactgaaaaaacgacatccaaaacactcgtcaccacaactcacc 127  Q
    ||||||||| |||| ||||||||   | |||| |||||||||||||| ||||| ||||||||||||  |||||||| |||||||||| |||| |||||||    
T  9926528 caacacccaccaaaataaacatcacccgcctaaaactgactcctatacttaccgaccactgaaaaa--gacatccataacactcgtcgccactactcacc 9926431  T
Q  128 tcaaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacat 185  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  9926430 tcaaaaaaacacccttgtaaaagagaacccagtcctcatcaccaacaacgagccacat 9926373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 915328 - 915424
Alignment:
Q  138 acccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccgaagaactccttctctaaagatcattcagcttccaccaccgcgcaac 234  Q
    |||||||||| |||||||| | ||||||||||||||| ||||| |||||||||||||||||| ||| || |||||| ||||||||||||||||||||    
T  915328 acccttgtaatagagaacccaatcctcatcaccaacactgagcaacatccgaagaactccttttcttaaaatcattgagcttccaccaccgcgcaac 915424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 29044674 - 29044760
Alignment:
Q  82 accactgaaaaaacgacatccaaaacactcgtcaccacaactcacctc-aaaagaacacccttgtaaaagagaaccaagtcctcatc 167  Q
    ||||||||| |||||||||||| ||||| | ||  ||| ||||||||| |||||||||||||||||| ||| |||| ||||||||||    
T  29044674 accactgaacaaacgacatccataacacccatcgtcactactcacctccaaaagaacacccttgtaacagaaaacccagtcctcatc 29044760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 5e-65; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 56 - 257
Target Start/End: Complemental strand, 35062744 - 35062544
Alignment:
Q  56 cctacaactgactcctatagttaccaaccactgaaaaaacgacatccaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaac 155  Q
    |||| ||||||||| |||| | |||||||||| ||||||| ||||||| |||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  35062744 cctaaaactgactcatatactaaccaaccact-aaaaaacaacatccataacactcgtcgccactactcacctcaagagaacacccttgtaaaagagaac 35062646  T
Q  156 caagtcctcatcaccaacaatgagccacatccgaagaactccttctctaaagatcattcagcttccaccaccgcgcaacatctagtccaccgaaggaaca 255  Q
    | ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||  |||||||||||||||    
T  35062645 ccagtcctcatcaccaacattgtgccacctccgaagaactccttctctaaagatcattcaccttccaccaccgcgcaacctctgatccaccgaaggaaca 35062546  T
Q  256 cc 257  Q
    ||    
T  35062545 cc 35062544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 226
Target Start/End: Complemental strand, 10552595 - 10552385
Alignment:
Q  14 atcaacacccataggtacaacacccaacaaactaaacatcctcctacaactgactcctatagttaccaaccactgaaaaaacgacatccaaaacactcgt 113  Q
    |||||||||| || | |||||||| | |||| ||||||||| |||| ||||||||| |||| | | |||||||| ||||||||||||||| || ||||||    
T  10552595 atcaacacccttaaggacaacaccaaccaaaataaacatcc-cctaaaactgactcatatactaagcaaccact-aaaaaacgacatccataaaactcgt 10552498  T
Q  114 caccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccgaagaactccttctctaaagatcatt 213  Q
    | |||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||||| ||||||||||| |||||||||||||||||    
T  10552497 cgccactactcacctcaaaagaacacccttgtaaaagagaacccagtcctcatctccaacactgtgccacctccgaagaacttcttctctaaagatcatt 10552398  T
Q  214 cagcttccaccac 226  Q
    |||||||||||||    
T  10552397 cagcttccaccac 10552385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 30 - 260
Target Start/End: Original strand, 41791029 - 41791261
Alignment:
Q  30 acaacacccaacaaactaaacatc--ctcctacaactgactcctatagttaccaaccactgaaaaaacgacatccaaaacactcgtcaccacaactcacc 127  Q
    ||||| |||| |||| ||||||||  | |||| ||||||||| |||| ||||  ||||||||||||||||||| || ||| ||| ||||||| |||||||    
T  41791029 acaacccccaccaaaataaacatcaccccctaaaactgactcatatacttactgaccactgaaaaaacgacattcataaccctcatcaccactactcacc 41791128  T
Q  128 tcaaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccgaagaactccttctctaaagatcattcagcttccaccacc 227  Q
    ||||||||||||||||||||||||| | | ||||||||||||||| | |||| |||||| |||||||||||| || ||| |||| || ||||||||||||    
T  41791129 tcaaaagaacacccttgtaaaagaggaaccagtcctcatcaccaaaagtgagtcacatctgaagaactccttttccaaatatcaatccgcttccaccacc 41791228  T
Q  228 gcgcaacatctagtccaccgaaggaacaccaaa 260  Q
    ||||||| ||||||||| ||||  |||||||||    
T  41791229 gcgcaacctctagtccatcgaaataacaccaaa 41791261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 30235875 - 30236112
Alignment:
Q  13 gatcaacacccataggtacaacacccaacaaactaaacatc--ctcctacaactgactcctatagttaccaaccactgaaaaaacgacatccaaaacact 110  Q
    |||||||||||| | | |||||||||| |||| ||||||||  | |||| |||||||||||||| | ||| |||| | || |||||||||||| ||||||    
T  30235875 gatcaacacccaaaaggacaacacccaccaaaataaacatcaccccctaaaactgactcctatattaaccgaccattaaataaacgacatccataacact 30235974  T
Q  111 cgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccgaagaactccttctctaaagatc 210  Q
    | || |||| ||||||| |||| ||||||||| | || |||||| | ||||||||  |||||||  ||| ||||||| ||||||| ||| ||||||||||    
T  30235975 catcgccactactcaccacaaacgaacaccctagcaagagagaaaccagtcctcaataccaacaccgagtcacatccaaagaacttcttttctaaagatc 30236074  T
Q  211 attcagcttccaccaccgcgcaacatctagtccaccga 248  Q
    | |||||||||||||| ||||||  ||| |||||||||    
T  30236075 aatcagcttccaccactgcgcaatctctggtccaccga 30236112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 61 - 260
Target Start/End: Original strand, 32945503 - 32945700
Alignment:
Q  61 aactgactcctatagttaccaaccactgaaaaaacgacatccaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagt 160  Q
    ||||||||||||||  |||| ||  |||||| ||||||||||| ||||||| || |||| |||||||||||||||||||  |||||||| |||| | |||    
T  32945503 aactgactcctatacctaccgacg-ctgaaagaacgacatccataacactcatcgccactactcacctcaaaagaacacttttgtaaaaaagaaaccagt 32945601  T
Q  161 cctcatcaccaacaatgagccacatccgaagaactccttctctaaagatcattcagcttccaccaccgcgcaacatctagtccaccgaaggaacaccaaa 260  Q
    | ||||||||||||  ||| |||||| |||||||| ||| |||||||||||||||||||||| || || || || || ||||||||||| ||||| ||||    
T  32945602 catcatcaccaacaccgagtcacatctgaagaacttcttttctaaagatcattcagcttccatca-cgtgcgacctccagtccaccgaaagaacatcaaa 32945700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 17720644 - 17720703
Alignment:
Q  201 tctaaagatcattcagcttccaccaccgcgcaacatctagtccaccgaaggaacaccaaa 260  Q
    ||||||||||| ||| ||||||||||| | |||| || ||||||||||| ||||||||||    
T  17720644 tctaaagatcaatcaacttccaccacctctcaacctcaagtccaccgaaagaacaccaaa 17720703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 1e-56; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 5 - 230
Target Start/End: Original strand, 30935127 - 30935356
Alignment:
Q  5 aaccatgtgatcaacacccataggtacaacacccaacaaactaaacatc--ctcctacaactgactcctatagttaccaaccactg--aaaaaacgacat 100  Q
    |||| ||| |||||||||| || |  ||||| ||| |||| ||||||||  | |||| ||||||||| |||| |||||| |||| |  ||||||||||||    
T  30935127 aaccctgtaatcaacacccttaagagcaacatccaccaaaataaacatcaccccctaaaactgactcttatacttaccagccaccggaaaaaaacgacat 30935226  T
Q  101 ccaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccgaagaactccttc 200  Q
    | | |||||||||| |||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||  |||||||||||||||||||||||     
T  30935227 ctataacactcgtcgccactactcacctcaaaagaacacccttgtaaaagagaactcagtcctcatcaccaacaccgagccacatccgaagaactccttt 30935326  T
Q  201 tctaaagatcattcagcttccaccaccgcg 230  Q
    ||||||||||||||||||||||||||||||    
T  30935327 tctaaagatcattcagcttccaccaccgcg 30935356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 13 - 260
Target Start/End: Original strand, 1652634 - 1652883
Alignment:
Q  13 gatcaacacccataggtacaacacccaacaaactaaacatc--ctcctacaactgactcctatagttaccaaccactgaaaaaacgacatccaaaacact 110  Q
    ||||||||| |||| | |||||||||| |||| ||||||||  | |||| |||||||| ||||  ||| |||||||| |||||||||||| || ||||||    
T  1652634 gatcaacactcataaggacaacacccaccaaaataaacatcaccccctaaaactgacttctatgtttaacaaccactaaaaaaacgacattcataacact 1652733  T
Q  111 cgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccgaagaactccttctctaaagatc 210  Q
    | ||  ||| |||||||||||||||||||||||| ||||||| | | | |||| ||||||||||  |||||| || ||| ||||||||| ||||||||||    
T  1652734 catcgtcactactcacctcaaaagaacacccttgaaaaagaggaaccattccttatcaccaacaccgagccaaattcgaggaactccttttctaaagatc 1652833  T
Q  211 attcagcttccaccaccgcgcaacatctagtccaccgaaggaacaccaaa 260  Q
    ||||| ||||| |||||||  ||| ||  |||||||||| ||||||||||    
T  1652834 attcaacttccgccaccgcttaacctccggtccaccgaaagaacaccaaa 1652883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 173
Target Start/End: Complemental strand, 34574948 - 34574847
Alignment:
Q  71 tatagttaccaaccactgaaaaaacgacatccaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtcctcatcacc 170  Q
    |||||| |||||||| | ||||||||||||||| ||||||||||| ||  ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  34574948 tatagtaaccaaccatt-aaaaaacgacatccataacactcgtcatcaatactcacctcaaaagaacacccttataaaagagaatcaagtcctcatcacc 34574850  T
Q  171 aac 173  Q
    |||    
T  34574849 aac 34574847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 823375 - 823431
Alignment:
Q  204 aaagatcattcagcttccaccaccgcgcaacatctagtccaccgaaggaacaccaaa 260  Q
    |||||||||||||||||| ||||| | |||| ||| ||| |||||| ||||||||||    
T  823375 aaagatcattcagcttccgccacctctcaacctctggtctaccgaaagaacaccaaa 823431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 9e-42; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 63 - 245
Target Start/End: Complemental strand, 12794385 - 12794203
Alignment:
Q  63 ctgactcctatagttaccaaccactgaaaaaacgacatccaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtcc 162  Q
    |||||||||||| ||| | ||||||||||||||||||| || ||||||| |  |||| ||||||||||||||||||||||| |||||||||| | |||||    
T  12794385 ctgactcctatacttatcgaccactgaaaaaacgacattcataacactcattgccactactcacctcaaaagaacacccttataaaagagaaaccagtcc 12794286  T
Q  163 tcatcaccaacaatgagccacatccgaagaactccttctctaaagatcattcagcttccaccaccgcgcaacatctagtccac 245  Q
    ||| | ||||||  ||| |||||| |||||| ||||| ||||||||||| || ||||||||||||||||||| || |||||||    
T  12794285 tcaaccccaacaccgagtcacatctgaagaaatccttttctaaagatcaatctgcttccaccaccgcgcaacctccagtccac 12794203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 56 - 260
Target Start/End: Original strand, 26215811 - 26216016
Alignment:
Q  56 cctacaactgactcctatagttaccaaccactgaa-aaaacgacatccaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaa 154  Q
    |||| |||||| ||||||| ||||| || |||||| ||||| |||| || ||||||||||||||| ||||||||||||||||||||  ||||||||||||    
T  26215811 cctaaaactgattcctatatttaccgac-actgaagaaaacaacattcataacactcgtcaccacgactcacctcaaaagaacaccaatgtaaaagagaa 26215909  T
Q  155 ccaagtcctcatcaccaacaatgagccacatccgaag-aactccttctctaaagatcattcagcttccaccaccgcgcaacatctagtccaccgaaggaa 253  Q
     | ||||||||||||||||| ||||||||||  |||| |||||||| || |||||||| |||||||||||||||||||||  ||  ||||||| || |||    
T  26215910 actagtcctcatcaccaacactgagccacatttgaagaaactccttttccaaagatcaatcagcttccaccaccgcgcaatctccggtccaccaaaagaa 26216009  T
Q  254 caccaaa 260  Q
    |||||||    
T  26216010 caccaaa 26216016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 27774905 - 27774836
Alignment:
Q  30 acaacacccaacaaactaaacatcctcctacaactgactcctatagttaccaaccactgaaaaaacgaca 99  Q
    |||||||||| |||| ||||||||| |  | |||||||| ||||| ||||||||||||||||||||||||    
T  27774905 acaacacccaccaaaataaacatcccctaaaaactgacttctatatttaccaaccactgaaaaaacgaca 27774836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 9224185 - 9224127
Alignment:
Q  201 tctaaagatcattcagcttccaccaccgcgcaacatctagtccaccgaaggaacaccaa 259  Q
    ||||||||||||||||||||||||||||| |||| ||  || ||||||| || ||||||    
T  9224185 tctaaagatcattcagcttccaccaccgcacaacctccggtgcaccgaaagagcaccaa 9224127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 257
Target Start/End: Original strand, 26534588 - 26534709
Alignment:
Q  129 caaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccgaagaactccttctctaaagatcattcagcttccaccaccg 228  Q
    ||||||||||||| ||||| ||| |||| |||| ||||||||   | ||||||||||||        |||| ||||||||||| ||||||||||||||||    
T  26534588 caaaagaacacccgtgtaacagaaaacccagtcatcatcacccctactgagccacatcca-------ccttttctaaagatcaatcagcttccaccaccg 26534680  T
Q  229 cgcaacatctagtccaccgaaggaacacc 257  Q
    | |||| |   |||||||||| |||||||    
T  26534681 cacaaccttcggtccaccgaaagaacacc 26534709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 21266360 - 21266263
Alignment:
Q  90 aaaaacgacatccaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatcc 187  Q
    |||||||||||||| ||||  | ||  ||| ||||||| |||| ||||||| |||||||||| |||  | |||||| |||||| | ||||||||||||    
T  21266360 aaaaacgacatccagaacaaccatcgtcactactcaccccaaaggaacaccgttgtaaaagaaaactcaatcctcaacaccaaaactgagccacatcc 21266263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 121 - 260
Target Start/End: Original strand, 43373952 - 43374091
Alignment:
Q  121 actcacctcaaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccgaagaactccttctctaaagatcattcagcttc 220  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||| ||| || ||||||||| || ||||||||||| ||||||||    
T  43373952 actcacctcaaaagaacacccttgtaaaagagaaacaagtcatcatcaccaacaccgagtcacctctgaagaactcattttctaaagatcaatcagcttc 43374051  T
Q  221 caccaccgcgcaacatctagtccaccgaaggaacaccaaa 260  Q
    |||||||||||||| ||   ||||| ||| ||||||||||    
T  43374052 caccaccgcgcaacctccgatccactgaaagaacaccaaa 43374091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 256
Target Start/End: Complemental strand, 19432296 - 19432130
Alignment:
Q  90 aaaaacgacatccaaaacactcgtcaccacaactcacctcaaaagaacacccttgtaaaagagaaccaagtcctcatcaccaacaatgagccacatccga 189  Q
    ||||||||||| |||||||||| |  || | ||||| ||| || |||||||||||||||||||||   |||||||||||||||||   || |||| ||||    
T  19432296 aaaaacgacattcaaaacactcattgccgctactcatctctaaggaacacccttgtaaaagagaaatcagtcctcatcaccaacaccaagtcacaaccga 19432197  T
Q  190 agaactccttctctaaagatcattcagcttccaccaccgcgcaacatctagtccaccgaaggaacac 256  Q
    | |||||||  || ||| ||||||||||||||||||| ||||||  ||| ||||||| || ||||||    
T  19432196 ataactcctcttccaaatatcattcagcttccaccactgcgcaatctctggtccaccaaaagaacac 19432130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 35800670 - 35800573
Alignment:
Q  163 tcatcaccaacaatgagccacatccgaagaactccttctctaaagatcattcagcttccaccaccgcgcaacatctagtccaccgaaggaacaccaaa 260  Q
    ||||||||||||| ||||||||||| |||||||||||  | ||||||||||||| ||||||||||||| ||| ||  |||||||||| ||||||||||    
T  35800670 tcatcaccaacaacgagccacatccaaagaactcctttaccaaagatcattcaggttccaccaccgcgaaacctccggtccaccgaaagaacaccaaa 35800573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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