View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7689_high_14 (Length: 398)

Name: NF7689_high_14
Description: NF7689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7689_high_14
NF7689_high_14
[»] chr5 (68 HSPs)
chr5 (20-365)||(38473468-38473813)
chr5 (155-332)||(19523976-19524152)
chr5 (179-286)||(15613522-15613629)
chr5 (167-332)||(1273094-1273259)
chr5 (171-286)||(42980701-42980816)
chr5 (167-291)||(19827127-19827251)
chr5 (157-328)||(5975751-5975922)
chr5 (167-285)||(5382947-5383065)
chr5 (171-269)||(15614969-15615067)
chr5 (167-269)||(18677981-18678083)
chr5 (167-335)||(5384289-5384457)
chr5 (171-268)||(27894033-27894130)
chr5 (185-285)||(42979471-42979571)
chr5 (167-278)||(19525288-19525399)
chr5 (157-291)||(224577-224711)
chr5 (167-281)||(1663192-1663306)
chr5 (160-269)||(12933749-12933858)
chr5 (167-291)||(12936089-12936213)
chr5 (171-279)||(15509204-15509312)
chr5 (161-285)||(40058017-40058141)
chr5 (216-291)||(15857605-15857680)
chr5 (179-269)||(7345399-7345489)
chr5 (160-286)||(8762392-8762518)
chr5 (160-269)||(12947910-12948019)
chr5 (171-269)||(18693707-18693805)
chr5 (171-269)||(21387646-21387744)
chr5 (167-332)||(22812332-22812498)
chr5 (167-332)||(12950206-12950371)
chr5 (216-285)||(42510168-42510237)
chr5 (171-279)||(4567973-4568081)
chr5 (157-279)||(10085844-10085966)
chr5 (179-234)||(32521703-32521758)
chr5 (171-237)||(5061037-5061103)
chr5 (180-269)||(26403325-26403414)
chr5 (167-269)||(26404219-26404321)
chr5 (171-291)||(18695634-18695754)
chr5 (221-285)||(32734190-32734254)
chr5 (160-235)||(1273383-1273458)
chr5 (231-286)||(10084667-10084722)
chr5 (171-273)||(4566960-4567062)
chr5 (171-237)||(5062227-5062293)
chr5 (160-286)||(40059320-40059446)
chr5 (220-285)||(12830931-12830996)
chr5 (220-285)||(12862911-12862976)
chr5 (220-269)||(22819558-22819607)
chr5 (171-237)||(15510304-15510370)
chr5 (231-285)||(22819510-22819564)
chr5 (179-269)||(26912347-26912437)
chr5 (171-237)||(32521963-32522029)
chr5 (212-334)||(32735423-32735545)
chr5 (216-294)||(42511650-42511728)
chr5 (216-269)||(326398-326451)
chr5 (220-269)||(2167523-2167572)
chr5 (180-237)||(22650669-22650726)
chr5 (157-214)||(33362631-33362688)
chr5 (180-285)||(38471307-38471412)
chr5 (171-239)||(20988699-20988767)
chr5 (212-280)||(24761719-24761787)
chr5 (167-206)||(24805296-24805335)
chr5 (171-237)||(15153886-15153952)
chr5 (171-237)||(19050758-19050824)
chr5 (221-291)||(21389130-21389200)
chr5 (157-249)||(223220-223313)
chr5 (171-243)||(1982721-1982793)
chr5 (171-243)||(12952769-12952841)
chr5 (171-243)||(28236928-28237000)
chr5 (171-243)||(37371066-37371138)
chr5 (167-227)||(41905180-41905240)
[»] scaffold0003 (2 HSPs)
scaffold0003 (157-365)||(48369-48577)
scaffold0003 (167-285)||(47075-47193)
[»] chr6 (35 HSPs)
chr6 (157-365)||(27438785-27438993)
chr6 (227-365)||(13800096-13800233)
chr6 (179-286)||(22299895-22300002)
chr6 (173-285)||(9927617-9927728)
chr6 (167-269)||(5311284-5311386)
chr6 (167-285)||(27440168-27440286)
chr6 (170-279)||(8412315-8412424)
chr6 (153-264)||(34084148-34084257)
chr6 (155-285)||(293633-293764)
chr6 (179-286)||(8411103-8411210)
chr6 (171-256)||(19368540-19368625)
chr6 (171-285)||(31738372-31738486)
chr6 (167-285)||(33802010-33802128)
chr6 (170-291)||(33807697-33807818)
chr6 (171-239)||(13173046-13173114)
chr6 (171-291)||(31740259-31740379)
chr6 (171-269)||(2138646-2138744)
chr6 (171-269)||(26581962-26582059)
chr6 (220-285)||(14328767-14328832)
chr6 (220-285)||(14421777-14421842)
chr6 (171-236)||(26584079-26584144)
chr6 (179-266)||(34083075-34083163)
chr6 (167-269)||(18139496-18139598)
chr6 (179-237)||(18773671-18773729)
chr6 (171-269)||(22298613-22298711)
chr6 (179-237)||(8447238-8447296)
chr6 (179-237)||(8456042-8456100)
chr6 (171-237)||(28225433-28225499)
chr6 (179-237)||(19367734-19367792)
chr6 (180-234)||(28226462-28226516)
chr6 (170-271)||(13176340-13176441)
chr6 (224-269)||(14326215-14326260)
chr6 (224-269)||(14419225-14419270)
chr6 (179-243)||(12203306-12203370)
chr6 (171-243)||(17916504-17916576)
[»] chr1 (85 HSPs)
chr1 (212-365)||(14171181-14171334)
chr1 (181-335)||(26054916-26055070)
chr1 (171-279)||(26056146-26056254)
chr1 (157-291)||(49139796-49139930)
chr1 (167-280)||(3978049-3978162)
chr1 (179-286)||(13641274-13641381)
chr1 (216-294)||(36511315-36511393)
chr1 (170-279)||(3979312-3979421)
chr1 (167-279)||(25787163-25787275)
chr1 (170-286)||(52181297-52181413)
chr1 (167-269)||(13930684-13930786)
chr1 (167-269)||(14071212-14071314)
chr1 (167-269)||(25785973-25786075)
chr1 (170-279)||(47410992-47411101)
chr1 (171-279)||(14390267-14390375)
chr1 (171-291)||(50679808-50679928)
chr1 (167-280)||(48467266-48467378)
chr1 (179-279)||(16217457-16217557)
chr1 (170-266)||(21277002-21277098)
chr1 (160-288)||(52741486-52741614)
chr1 (167-266)||(47411460-47411559)
chr1 (202-291)||(9592278-9592367)
chr1 (152-269)||(34531653-34531770)
chr1 (182-279)||(42248304-42248401)
chr1 (171-239)||(13568484-13568552)
chr1 (171-279)||(20953297-20953405)
chr1 (167-279)||(47136686-47136798)
chr1 (202-285)||(19466198-19466281)
chr1 (167-332)||(13929300-13929465)
chr1 (211-279)||(16218477-16218545)
chr1 (167-294)||(47560144-47560271)
chr1 (171-239)||(51424260-51424328)
chr1 (202-269)||(14169659-14169726)
chr1 (171-237)||(1061337-1061403)
chr1 (171-237)||(33941326-33941392)
chr1 (171-256)||(2236822-2236907)
chr1 (212-273)||(19464650-19464711)
chr1 (216-265)||(51726857-51726906)
chr1 (171-279)||(2237977-2238085)
chr1 (173-237)||(9119813-9119877)
chr1 (171-279)||(35683064-35683172)
chr1 (179-279)||(48935109-48935209)
chr1 (170-237)||(14312783-14312850)
chr1 (171-269)||(13642566-13642664)
chr1 (171-237)||(48974447-48974513)
chr1 (212-273)||(14764279-14764340)
chr1 (216-285)||(36509865-36509934)
chr1 (171-279)||(35684202-35684309)
chr1 (179-243)||(40135372-40135436)
chr1 (171-243)||(47512119-47512191)
chr1 (179-234)||(1873898-1873953)
chr1 (158-237)||(2973049-2973128)
chr1 (171-237)||(1061493-1061559)
chr1 (171-237)||(1898013-1898079)
chr1 (171-233)||(13567175-13567237)
chr1 (171-237)||(34532743-34532809)
chr1 (179-237)||(48934258-48934316)
chr1 (171-235)||(9123442-9123506)
chr1 (157-249)||(9633770-9633862)
chr1 (220-268)||(22167837-22167885)
chr1 (220-328)||(24516392-24516500)
chr1 (171-243)||(32823467-32823539)
chr1 (150-230)||(33793767-33793847)
chr1 (173-237)||(44340104-44340168)
chr1 (157-285)||(45570314-45570441)
chr1 (180-243)||(32823576-32823639)
chr1 (171-234)||(42244513-42244576)
chr1 (276-354)||(14429868-14429946)
chr1 (275-357)||(19194816-19194898)
chr1 (223-285)||(40811256-40811318)
chr1 (167-285)||(52742969-52743087)
chr1 (179-243)||(2971715-2971780)
chr1 (221-282)||(21278214-21278275)
chr1 (157-237)||(29264867-29264946)
chr1 (170-243)||(39193589-39193662)
chr1 (179-256)||(48973215-48973292)
chr1 (216-289)||(51725397-51725470)
chr1 (171-243)||(20171197-20171269)
chr1 (171-243)||(27114692-27114764)
chr1 (171-243)||(28309771-28309843)
chr1 (171-239)||(31859600-31859667)
chr1 (171-207)||(33850311-33850347)
chr1 (171-207)||(33943631-33943667)
chr1 (220-328)||(40110602-40110710)
chr1 (171-243)||(47511376-47511448)
[»] chr8 (68 HSPs)
chr8 (167-360)||(36939951-36940144)
chr8 (180-294)||(37274905-37275019)
chr8 (167-285)||(36756069-36756187)
chr8 (167-278)||(38589826-38589936)
chr8 (171-291)||(24068339-24068459)
chr8 (179-279)||(31625383-31625483)
chr8 (167-269)||(38591016-38591118)
chr8 (167-269)||(37472408-37472510)
chr8 (167-269)||(43275755-43275857)
chr8 (167-263)||(14820198-14820294)
chr8 (167-291)||(29739630-29739754)
chr8 (167-279)||(31623911-31624023)
chr8 (160-279)||(16363811-16363930)
chr8 (171-285)||(35943916-35944031)
chr8 (160-271)||(43277928-43278039)
chr8 (179-285)||(117065-117171)
chr8 (167-269)||(36070183-36070285)
chr8 (220-285)||(20308663-20308728)
chr8 (220-285)||(21095296-21095361)
chr8 (150-279)||(41867915-41868044)
chr8 (171-279)||(45385793-45385901)
chr8 (150-277)||(7796809-7796935)
chr8 (167-273)||(4810129-4810234)
chr8 (179-283)||(6843772-6843878)
chr8 (171-285)||(19913501-19913615)
chr8 (171-269)||(24069455-24069553)
chr8 (216-335)||(34616183-34616307)
chr8 (171-285)||(37994-38108)
chr8 (179-277)||(7816090-7816187)
chr8 (170-332)||(35945383-35945545)
chr8 (179-285)||(37324681-37324787)
chr8 (179-285)||(39546670-39546776)
chr8 (216-285)||(13367043-13367112)
chr8 (171-332)||(19914852-19915013)
chr8 (171-271)||(3237427-3237526)
chr8 (171-271)||(39515208-39515308)
chr8 (216-279)||(1570205-1570268)
chr8 (212-279)||(27750620-27750687)
chr8 (167-262)||(37323353-37323447)
chr8 (171-237)||(6844614-6844680)
chr8 (171-237)||(21267173-21267239)
chr8 (231-285)||(36938750-36938804)
chr8 (160-207)||(8395022-8395069)
chr8 (155-237)||(10052097-10052179)
chr8 (171-278)||(29738300-29738407)
chr8 (167-269)||(37276252-37276354)
chr8 (167-250)||(43386730-43386813)
chr8 (220-285)||(2421286-2421351)
chr8 (216-285)||(7486131-7486200)
chr8 (220-269)||(8095404-8095453)
chr8 (169-273)||(41866901-41867005)
chr8 (167-331)||(10053691-10053855)
chr8 (309-357)||(31844518-31844566)
chr8 (160-243)||(4675750-4675833)
chr8 (157-268)||(4807361-4807472)
chr8 (275-357)||(2075488-2075570)
chr8 (179-277)||(7770899-7770996)
chr8 (179-236)||(7815060-7815117)
chr8 (171-237)||(13360362-13360428)
chr8 (171-233)||(29441625-29441687)
chr8 (198-248)||(36757260-36757310)
chr8 (179-285)||(45194500-45194606)
chr8 (171-243)||(3612618-3612690)
chr8 (276-361)||(42793816-42793901)
chr8 (216-325)||(45195757-45195866)
chr8 (171-243)||(15989013-15989085)
chr8 (229-269)||(31871462-31871502)
chr8 (153-329)||(37473985-37474161)
[»] chr4 (93 HSPs)
chr4 (167-286)||(33376223-33376342)
chr4 (167-328)||(31711097-31711258)
chr4 (156-279)||(1273432-1273554)
chr4 (171-285)||(15446663-15446777)
chr4 (171-353)||(46795951-46796133)
chr4 (152-285)||(11114973-11115106)
chr4 (167-279)||(33377363-33377475)
chr4 (160-332)||(21104256-21104428)
chr4 (157-363)||(38553924-38554130)
chr4 (171-353)||(47667188-47667369)
chr4 (167-328)||(28103436-28103597)
chr4 (155-267)||(26393138-26393250)
chr4 (167-270)||(27408768-27408871)
chr4 (170-285)||(35787804-35787919)
chr4 (167-286)||(40146615-40146734)
chr4 (167-285)||(86808-86926)
chr4 (167-285)||(11113747-11113865)
chr4 (171-285)||(38370291-38370405)
chr4 (180-289)||(44304968-44305077)
chr4 (167-287)||(10403408-10403527)
chr4 (167-279)||(37560298-37560410)
chr4 (179-279)||(53400202-53400302)
chr4 (188-279)||(5688636-5688727)
chr4 (216-294)||(34439644-34439722)
chr4 (170-255)||(30682728-30682813)
chr4 (181-269)||(10403298-10403386)
chr4 (171-239)||(15445445-15445513)
chr4 (179-291)||(15787489-15787601)
chr4 (216-279)||(5687229-5687292)
chr4 (180-279)||(26788540-26788639)
chr4 (170-249)||(40143662-40143741)
chr4 (212-334)||(6139047-6139169)
chr4 (171-237)||(26791466-26791531)
chr4 (171-279)||(29833381-29833489)
chr4 (216-268)||(34438460-34438512)
chr4 (167-279)||(37559003-37559115)
chr4 (171-286)||(48206169-48206284)
chr4 (166-269)||(55952830-55952932)
chr4 (179-269)||(3217618-3217708)
chr4 (171-237)||(19049913-19049979)
chr4 (167-269)||(27410692-27410792)
chr4 (147-285)||(39592282-39592420)
chr4 (160-269)||(55953861-55953970)
chr4 (180-285)||(11094544-11094649)
chr4 (171-256)||(30671003-30671088)
chr4 (212-285)||(38419010-38419083)
chr4 (154-285)||(30683020-30683151)
chr4 (201-328)||(307755-307882)
chr4 (220-291)||(38417611-38417682)
chr4 (167-269)||(6616220-6616322)
chr4 (171-237)||(12396915-12396981)
chr4 (167-285)||(15786957-15787075)
chr4 (171-269)||(48207726-48207824)
chr4 (220-334)||(50531700-50531814)
chr4 (196-361)||(3528224-3528389)
chr4 (216-269)||(17319096-17319149)
chr4 (225-285)||(6140353-6140413)
chr4 (171-279)||(44128333-44128441)
chr4 (157-237)||(52881971-52882051)
chr4 (171-291)||(56001255-56001375)
chr4 (154-237)||(28370682-28370765)
chr4 (202-285)||(50530543-50530626)
chr4 (179-269)||(56000304-56000394)
chr4 (171-237)||(23752025-23752091)
chr4 (212-266)||(26121920-26121974)
chr4 (171-285)||(44302729-44302843)
chr4 (171-237)||(53401492-53401558)
chr4 (167-356)||(39590946-39591135)
chr4 (245-318)||(43895577-43895650)
chr4 (171-269)||(44126605-44126705)
chr4 (171-332)||(52658920-52659081)
chr4 (157-237)||(38555317-38555397)
chr4 (211-266)||(29663691-29663746)
chr4 (167-286)||(29686261-29686380)
chr4 (196-271)||(52660221-52660296)
chr4 (179-237)||(52880830-52880889)
chr4 (171-237)||(526760-526826)
chr4 (171-233)||(937143-937205)
chr4 (171-237)||(2310823-2310889)
chr4 (171-237)||(30672105-30672171)
chr4 (171-233)||(44690900-44690962)
chr4 (167-269)||(47668606-47668708)
chr4 (216-269)||(43419384-43419437)
chr4 (220-285)||(44159143-44159208)
chr4 (174-243)||(56297714-56297783)
chr4 (171-234)||(2309853-2309916)
chr4 (171-243)||(26202421-26202493)
chr4 (217-285)||(31712499-31712567)
chr4 (167-291)||(35789577-35789701)
chr4 (179-243)||(43894122-43894186)
chr4 (171-227)||(43895648-43895704)
chr4 (171-207)||(44655730-44655766)
chr4 (171-207)||(44664397-44664433)
[»] chr7 (87 HSPs)
chr7 (167-279)||(19278358-19278470)
chr7 (171-286)||(43936132-43936247)
chr7 (212-365)||(27897742-27897896)
chr7 (171-265)||(43935194-43935288)
chr7 (171-265)||(7347233-7347327)
chr7 (167-291)||(13446645-13446769)
chr7 (155-279)||(22060456-22060580)
chr7 (202-286)||(35127850-35127934)
chr7 (180-327)||(24873548-24873695)
chr7 (179-286)||(47163170-47163277)
chr7 (167-265)||(4858357-4858455)
chr7 (171-269)||(19279621-19279719)
chr7 (160-285)||(43930317-43930442)
chr7 (171-271)||(36702786-36702886)
chr7 (171-283)||(41126248-41126360)
chr7 (155-243)||(41516379-41516467)
chr7 (160-265)||(43007662-43007767)
chr7 (181-279)||(48754015-48754113)
chr7 (154-291)||(40926506-40926643)
chr7 (170-279)||(48672774-48672883)
chr7 (167-286)||(22744751-22744870)
chr7 (167-279)||(43006390-43006502)
chr7 (167-269)||(36702959-36703062)
chr7 (211-289)||(14206722-14206800)
chr7 (211-289)||(14215412-14215490)
chr7 (167-265)||(18802402-18802500)
chr7 (157-279)||(22746319-22746441)
chr7 (167-332)||(14107837-14108002)
chr7 (167-332)||(14417794-14417959)
chr7 (154-269)||(25153650-25153765)
chr7 (160-328)||(41514996-41515162)
chr7 (171-279)||(41618498-41618606)
chr7 (167-279)||(46674933-46675045)
chr7 (170-285)||(38406026-38406141)
chr7 (167-285)||(4857206-4857324)
chr7 (171-233)||(13446388-13446450)
chr7 (171-249)||(17288249-17288327)
chr7 (171-245)||(18801224-18801298)
chr7 (171-245)||(19848867-19848941)
chr7 (167-249)||(33459572-33459654)
chr7 (171-269)||(36673845-36673943)
chr7 (171-237)||(38002555-38002621)
chr7 (167-279)||(22061794-22061906)
chr7 (217-285)||(26406180-26406248)
chr7 (171-279)||(30222655-30222763)
chr7 (170-237)||(33341306-33341373)
chr7 (179-271)||(34557414-34557506)
chr7 (179-291)||(45721753-45721865)
chr7 (167-278)||(25154936-25155047)
chr7 (171-237)||(1884249-1884315)
chr7 (167-245)||(1970818-1970896)
chr7 (160-269)||(38408283-38408392)
chr7 (171-237)||(41616633-41616699)
chr7 (216-278)||(46458713-46458775)
chr7 (179-268)||(7148068-7148157)
chr7 (167-332)||(25532151-25532314)
chr7 (211-268)||(45719664-45719721)
chr7 (167-279)||(33458315-33458426)
chr7 (171-271)||(38001513-38001613)
chr7 (227-291)||(43931853-43931917)
chr7 (179-271)||(46457087-46457179)
chr7 (202-269)||(27899223-27899290)
chr7 (158-264)||(48671074-48671179)
chr7 (171-237)||(1885282-1885348)
chr7 (170-328)||(28326340-28326497)
chr7 (171-237)||(30224017-30224083)
chr7 (171-237)||(34558342-34558408)
chr7 (167-243)||(28325078-28325153)
chr7 (220-271)||(10256181-10256232)
chr7 (220-334)||(10257332-10257444)
chr7 (171-234)||(48755592-48755655)
chr7 (179-237)||(2903061-2903119)
chr7 (171-237)||(7345923-7345989)
chr7 (171-237)||(18670544-18670610)
chr7 (171-237)||(21171527-21171593)
chr7 (157-191)||(32894884-32894918)
chr7 (227-269)||(35128200-35128242)
chr7 (171-233)||(35480217-35480278)
chr7 (179-237)||(41127212-41127270)
chr7 (179-289)||(45089489-45089598)
chr7 (212-265)||(35315235-35315288)
chr7 (184-269)||(46673512-46673596)
chr7 (181-269)||(7146799-7146886)
chr7 (179-243)||(8439783-8439847)
chr7 (171-243)||(33228856-33228928)
chr7 (171-243)||(37373543-37373615)
chr7 (167-207)||(44114726-44114766)
[»] chr3 (90 HSPs)
chr3 (167-278)||(43101899-43102010)
chr3 (167-279)||(54653965-54654077)
chr3 (160-271)||(51825628-51825739)
chr3 (179-281)||(47808103-47808205)
chr3 (160-332)||(8372562-8372734)
chr3 (171-279)||(11219439-11219547)
chr3 (171-291)||(11220645-11220765)
chr3 (171-279)||(29536723-29536831)
chr3 (171-286)||(47855330-47855445)
chr3 (160-332)||(32980398-32980570)
chr3 (160-291)||(25585820-25585951)
chr3 (154-285)||(26798899-26799030)
chr3 (171-361)||(48252942-48253132)
chr3 (174-286)||(13077943-13078055)
chr3 (171-286)||(7820399-7820514)
chr3 (167-285)||(8371225-8371343)
chr3 (167-273)||(53808323-53808429)
chr3 (167-279)||(42632711-42632823)
chr3 (167-269)||(42633895-42633997)
chr3 (160-269)||(49122011-49122120)
chr3 (179-239)||(39190763-39190823)
chr3 (171-279)||(41386139-41386247)
chr3 (160-279)||(51824124-51824243)
chr3 (171-279)||(53049036-53049144)
chr3 (167-286)||(10987645-10987764)
chr3 (181-328)||(19252952-19253099)
chr3 (216-335)||(43345373-43345492)
chr3 (212-285)||(23559869-23559942)
chr3 (173-258)||(51401371-51401456)
chr3 (171-279)||(32974222-32974330)
chr3 (171-251)||(32979097-32979177)
chr3 (167-279)||(41387432-41387544)
chr3 (179-279)||(47806835-47806934)
chr3 (171-279)||(53047906-53048014)
chr3 (167-335)||(53809436-53809604)
chr3 (196-279)||(2124063-2124146)
chr3 (167-285)||(25583119-25583237)
chr3 (172-279)||(39287480-39287587)
chr3 (171-237)||(7822027-7822093)
chr3 (167-284)||(19622010-19622127)
chr3 (156-237)||(39133011-39133092)
chr3 (160-269)||(43103305-43103414)
chr3 (180-353)||(47766876-47767048)
chr3 (171-256)||(48825821-48825906)
chr3 (179-239)||(48034026-48034086)
chr3 (171-286)||(29537134-29537249)
chr3 (227-334)||(35173212-35173319)
chr3 (160-279)||(36626729-36626848)
chr3 (183-286)||(49334329-49334432)
chr3 (171-237)||(19579229-19579295)
chr3 (171-237)||(32973148-32973214)
chr3 (171-237)||(39288480-39288546)
chr3 (171-233)||(40502260-40502322)
chr3 (171-237)||(48035365-48035431)
chr3 (171-269)||(51400224-51400322)
chr3 (171-237)||(52293564-52293630)
chr3 (167-269)||(54752621-54752723)
chr3 (171-256)||(19579316-19579401)
chr3 (220-277)||(43346448-43346505)
chr3 (171-239)||(7583479-7583547)
chr3 (149-237)||(17350143-17350231)
chr3 (171-239)||(53347038-53347105)
chr3 (171-234)||(33563958-33564021)
chr3 (171-234)||(35633236-35633299)
chr3 (171-237)||(1301041-1301107)
chr3 (171-237)||(5416207-5416273)
chr3 (171-269)||(11482996-11483094)
chr3 (171-237)||(46446378-46446444)
chr3 (171-233)||(52292603-52292665)
chr3 (179-237)||(53342733-53342791)
chr3 (171-233)||(55015662-55015724)
chr3 (171-237)||(55443591-55443657)
chr3 (170-335)||(17345319-17345483)
chr3 (171-239)||(2225063-2225131)
chr3 (179-291)||(19622906-19623018)
chr3 (171-243)||(30431384-30431456)
chr3 (281-361)||(45422082-45422162)
chr3 (220-271)||(21127983-21128034)
chr3 (160-243)||(30838505-30838588)
chr3 (170-265)||(48254902-48254995)
chr3 (182-237)||(52705349-52705404)
chr3 (179-234)||(55442611-55442666)
chr3 (275-357)||(143096-143178)
chr3 (171-229)||(5417097-5417155)
chr3 (275-357)||(21515376-21515458)
chr3 (179-285)||(35174375-35174481)
chr3 (167-285)||(47765444-47765561)
chr3 (171-221)||(47854519-47854569)
chr3 (220-269)||(12060716-12060765)
chr3 (171-243)||(51214201-51214273)
[»] chr2 (65 HSPs)
chr2 (171-279)||(12852895-12853003)
chr2 (171-332)||(6706935-6707096)
chr2 (227-365)||(25569834-25569972)
chr2 (167-291)||(23178869-23178993)
chr2 (167-291)||(23590126-23590250)
chr2 (180-286)||(6209057-6209162)
chr2 (167-279)||(42028957-42029069)
chr2 (179-286)||(1624968-1625074)
chr2 (167-285)||(23177678-23177797)
chr2 (167-285)||(23588935-23589054)
chr2 (157-279)||(15650436-15650558)
chr2 (171-251)||(12854131-12854211)
chr2 (221-332)||(40174711-40174821)
chr2 (184-294)||(21012064-21012174)
chr2 (160-291)||(12958415-12958545)
chr2 (167-285)||(7036971-7037089)
chr2 (171-239)||(10477351-10477419)
chr2 (216-285)||(14509263-14509332)
chr2 (160-269)||(34039261-34039370)
chr2 (167-243)||(7038367-7038443)
chr2 (167-291)||(37867761-37867885)
chr2 (171-278)||(37869040-37869147)
chr2 (171-269)||(42027202-42027300)
chr2 (171-286)||(42246600-42246715)
chr2 (171-237)||(3254865-3254931)
chr2 (179-269)||(4829482-4829572)
chr2 (171-233)||(33837800-33837862)
chr2 (167-279)||(2581808-2581920)
chr2 (179-239)||(4630123-4630183)
chr2 (220-280)||(14510507-14510567)
chr2 (181-248)||(2583576-2583643)
chr2 (220-291)||(3533613-3533684)
chr2 (202-269)||(7490204-7490271)
chr2 (171-237)||(5564068-5564134)
chr2 (171-237)||(5565186-5565252)
chr2 (160-285)||(28109862-28109987)
chr2 (157-289)||(10368374-10368506)
chr2 (170-243)||(42368343-42368415)
chr2 (179-279)||(2305557-2305657)
chr2 (179-271)||(4628899-4628991)
chr2 (180-268)||(11386642-11386730)
chr2 (170-237)||(3666309-3666376)
chr2 (171-237)||(3665233-3665299)
chr2 (171-237)||(15268390-15268456)
chr2 (171-269)||(29424621-29424719)
chr2 (179-237)||(33836786-33836844)
chr2 (212-273)||(3532244-3532305)
chr2 (179-259)||(10367256-10367336)
chr2 (179-239)||(3255917-3255977)
chr2 (171-243)||(27264608-27264680)
chr2 (179-243)||(35799529-35799593)
chr2 (171-239)||(41312509-41312577)
chr2 (160-259)||(12959724-12959823)
chr2 (171-234)||(41313311-41313374)
chr2 (167-237)||(41795993-41796063)
chr2 (171-237)||(2306702-2306767)
chr2 (171-237)||(14482132-14482198)
chr2 (171-237)||(17179069-17179135)
chr2 (160-230)||(21010542-21010612)
chr2 (216-286)||(35801037-35801107)
chr2 (171-232)||(14573854-14573915)
chr2 (216-285)||(15850652-15850721)
chr2 (259-319)||(8538583-8538643)
chr2 (171-243)||(15816701-15816773)
chr2 (171-243)||(43015548-43015620)
[»] scaffold0051 (2 HSPs)
scaffold0051 (167-291)||(22133-22256)
scaffold0051 (170-249)||(39930-40009)
[»] scaffold0369 (1 HSPs)
scaffold0369 (160-273)||(12908-13021)
[»] scaffold1974 (1 HSPs)
scaffold1974 (167-285)||(621-739)
[»] scaffold1878 (1 HSPs)
scaffold1878 (167-285)||(535-653)
[»] scaffold0290 (2 HSPs)
scaffold0290 (167-285)||(9471-9589)
scaffold0290 (167-332)||(8384-8549)
[»] scaffold0025 (2 HSPs)
scaffold0025 (167-260)||(56718-56811)
scaffold0025 (167-249)||(54596-54678)
[»] scaffold0178 (2 HSPs)
scaffold0178 (171-286)||(2257-2372)
scaffold0178 (179-285)||(1229-1334)
[»] scaffold2127 (1 HSPs)
scaffold2127 (167-279)||(514-626)
[»] scaffold0177 (1 HSPs)
scaffold0177 (171-279)||(1764-1872)
[»] scaffold0155 (1 HSPs)
scaffold0155 (171-238)||(5178-5245)
[»] scaffold0007 (1 HSPs)
scaffold0007 (167-286)||(145861-145980)
[»] scaffold0098 (1 HSPs)
scaffold0098 (222-332)||(42292-42402)
[»] scaffold0045 (2 HSPs)
scaffold0045 (167-281)||(77178-77292)
scaffold0045 (179-230)||(75762-75813)
[»] scaffold0046 (2 HSPs)
scaffold0046 (171-291)||(24802-24922)
scaffold0046 (167-250)||(23411-23494)
[»] scaffold0024 (1 HSPs)
scaffold0024 (167-335)||(72929-73097)
[»] scaffold0084 (1 HSPs)
scaffold0084 (171-328)||(11715-11872)
[»] scaffold0013 (1 HSPs)
scaffold0013 (167-271)||(96165-96269)
[»] scaffold0038 (2 HSPs)
scaffold0038 (171-237)||(25931-25997)
scaffold0038 (180-234)||(26960-27014)
[»] scaffold1827 (1 HSPs)
scaffold1827 (180-237)||(1100-1156)
[»] scaffold0166 (1 HSPs)
scaffold0166 (212-280)||(4216-4284)
[»] scaffold0002 (1 HSPs)
scaffold0002 (185-237)||(458501-458553)
[»] scaffold0687 (1 HSPs)
scaffold0687 (179-236)||(6606-6663)
[»] scaffold0630 (1 HSPs)
scaffold0630 (171-237)||(2019-2085)
[»] scaffold0064 (1 HSPs)
scaffold0064 (171-237)||(20623-20689)
[»] scaffold0839 (1 HSPs)
scaffold0839 (170-243)||(160-233)


Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 20 - 365
Target Start/End: Complemental strand, 38473813 - 38473468
Alignment:
Q  20 tcaatgacatggctccgtttcttattgatgtgcagatgttagtgtgtaaaattagattttgggttgtcacgtctacacattcgtaaggacggtgatcatg 119  Q
    ||||||||||||||||||| ||||||||| ||||||||||| |||  || |||||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  38473813 tcaatgacatggctccgttccttattgatatgcagatgttaatgta-aatattagattttgggttgtcacatctacacattcataagaacggtgatcatg 38473715  T
Q  120 ttgttgtgtcggatgacaataattgagtttaataattggtttaatgtatcatttggtctcttaactta-tttttagattttattttggttctctaattat 218  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| ||| ||||||||  |||| ||| ||||||||||| ||||||||  ||||| | |    
T  38473714 ttgttgtgttggatgacactaattgagtttaataattggtttaatatattatttggtcctttaatttactttttagatttcattttggtcatctaactgt 38473615  T
Q  219 aaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaacca 318  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  38473614 aaagtgtcttaatttggtcccataaatcttctgtcgtttactattttggtcatttccgttaattttttaatgtatattaatcttgatatcattttaacca 38473515  T
Q  319 cttgattgcaggtctatggtaactaagagtgaaccatcaacacttga 365  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  38473514 cttgattgcaggtctatagtatctaagagtgaaccatcaacacttga 38473468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 155 - 332
Target Start/End: Original strand, 19523976 - 19524152
Alignment:
Q  155 ttggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcg 254  Q
    |||| ||||| |||||||||||| |||||||||||||| | ||| | |||||| |  ||| ||||||||||||||||||||||| |||||| ||||||||    
T  19523976 ttggcttaatatatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtct-ataaattttctgtcg 19524074  T
Q  255 tttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 332  Q
    ||||| ||||||||||| | ||||  ||||||||||| || |||| |||||||  |||| |||| | |||||||||||    
T  19524075 tttaccattttggtcatgtccgtttgttttttaatgtctaataattttgatattgttttgaccattcgattgcaggtc 19524152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 179 - 286
Target Start/End: Original strand, 15613522 - 15613629
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||| ||||| ||||||||  ||||| |||||||||||||||||||||| ||||||||||||  ||||||||||||||||| ||| ||||    
T  15613522 cttaacttatttttggatttcattttggtcttctaactataaagtgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgtt 15613621  T
Q  279 aatttttt 286  Q
    ||||||||    
T  15613622 aatttttt 15613629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 167 - 332
Target Start/End: Original strand, 1273094 - 1273259
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| ||||| |||||||| | ||| |||||||| || ||| |||||| ||||||||||||||| |||||||||||||  |||||| ||||||    
T  1273094 atcatttggtcccttaatttatttttggttttcattttggtcctttaactataaaatgtctcaatttggtcccataaatcttctgcagtttacaattttg 1273193  T
Q  267 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 332  Q
    |||  || ||||| ||||||||||| || || | ||||||| |||| ||||| | |||||||||||    
T  1273194 gtcccctccgttagttttttaatgtttaatatttttgatatgatttcaaccattcgattgcaggtc 1273259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 171 - 286
Target Start/End: Complemental strand, 42980816 - 42980701
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    |||| ||| |||| |||||||||||||| |||||||| || ||| ||||||||||||||||||||||||||| |||||||| | ||||| |||||||||     
T  42980816 tttgatcttttaatttatttttagatttcattttggtcctataactataaagtgtctcaatttggtctcatatatcttctgccatttaccattttggtcc 42980717  T
Q  271 tcttcgttaatttttt 286  Q
    | | ||||||||||||    
T  42980716 tttccgttaatttttt 42980701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 167 - 291
Target Start/End: Complemental strand, 19827251 - 19827127
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||| |||||||||||||||||| | ||| | |||||| |  |||||||||||||||||||||||||| ||||||||||||  ||||||| ||||||    
T  19827251 atcatttagtctcttaacttatttttggttttcaatttggtcccataattataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttg 19827152  T
Q  267 gtcatcttcgttaattttttaatgt 291  Q
    ||||  | ||||  |||||||||||    
T  19827151 gtcacatccgtttgttttttaatgt 19827127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 328
Target Start/End: Original strand, 5975751 - 5975922
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 256  Q
    ||||||||  |||||||||||  |||||||||||||   ||| |||||||| | ||||||||||||||||||||||||||||||||| |||||    |||    
T  5975751 ggtttaatacatcatttggtcctttaacttattttttattttaattttggtcccctaattataaagtgtctcaatttggtctcataagtcttcctctgtt 5975850  T
Q  257 tactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgca 328  Q
    ||||||| ||||  |||  |||| ||||||||||| ||    | ||||||| |||||||||| |||||||||    
T  5975851 tactattgtggttctctctgttagttttttaatgtctaaagtttttgatatgattttaaccatttgattgca 5975922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 5382947 - 5383065
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | |||   ||||||   ||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  5382947 atcatttggtcccttaacttatttttggttttctatttggtctcctaattataaagtgtctcaatttggtcccataaatctttggtcgtttactattttg 5383046  T
Q  267 gtcatcttcgttaattttt 285  Q
     || ||| ||||| |||||    
T  5383047 atcctctccgttagttttt 5383065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 15615067 - 15614969
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||| |||| ||||||||| ||||| |||||||| | |||| |||||||||||||||||||||  ||||||| ||||| |||||||||||||||||    
T  15615067 tttggtcccttatcttatttttggatttcattttggtccgctaactataaagtgtctcaatttggttccataaattttctgccgtttactattttggtc 15614969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 269
Target Start/End: Original strand, 18677981 - 18678083
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||| | | |||| |||||||||||||||||||||| |||||||||||||||||||||  |||||    
T  18677981 atcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtctcaatttggtcccataaatcttctgtcgtttaccgttttg 18678080  T
Q  267 gtc 269  Q
    |||    
T  18678081 gtc 18678083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 167 - 335
Target Start/End: Complemental strand, 5384457 - 5384289
Alignment:
Q  167 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    ||||||||||  ||||| |||||||| |||||| | |||| | | |||| |||||||||||||||||||||| |||||||||||   |||||||||||||    
T  5384457 atcatttggttccttaatttattttt-gattttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttcgtccgtttactatttt 5384359  T
Q  266 ggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctat 335  Q
    |||| ||| ||||| ||||||||||| || || | ||||||| |||| ||||| | ||||| || |||||    
T  5384358 ggtcctctccgttagttttttaatgtttaatatttttgatataatttcaaccattcgattgtagatctat 5384289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 171 - 268
Target Start/End: Complemental strand, 27894130 - 27894033
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 268  Q
    ||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  27894130 tttggtcgcttaacttattttttgttttcactttggtcccctaactataaagtgtttcaatttggtctcataaattttccgtcgtttactattttggt 27894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 42979471 - 42979571
Alignment:
Q  185 ttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatttt 284  Q
    |||||||| ||||| |||||||| |||||| |||||||||| |||||||||||  |||| ||||||| ||||||||||||||||| ||| |||| |||||    
T  42979471 ttatttttggatttcattttggtcctctaactataaagtgtttcaatttggtccaataattcttctgccgtttactattttggtcctctccgttgatttt 42979570  T
Q  285 t 285  Q
    |    
T  42979571 t 42979571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 19525399 - 19525288
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| ||||||||||||| |||||||| ||||| ||||||| ||||||| ||||||    
T  19525399 atcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctccatttggtcacataagtcttctgccgtttaccattttg 19525300  T
Q  267 gtcatcttcgtt 278  Q
    ||| ||| ||||    
T  19525299 gtcctctccgtt 19525288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 291
Target Start/End: Complemental strand, 224711 - 224577
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 256  Q
    ||||||||  ||||| ||||| |||||||||||||  | ||| |||||||| | |||| |||||||||||||||||||||||||||| |||||   || |    
T  224711 ggtttaatacatcatctggtcccttaacttattttatgttttcattttggtcccctaactataaagtgtctcaatttggtctcataagtcttcctccgat 224612  T
Q  257 tactattttggtcatcttcgttaattttttaatgt 291  Q
    ||||| | | ||||||| ||||| |||||||||||    
T  224611 tactaatgtagtcatctccgttagttttttaatgt 224577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 167 - 281
Target Start/End: Original strand, 1663192 - 1663306
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||| ||| |||||||||||||| ||||| | |||| | |  ||| |||||||||||| |||||||||  |||||||||||| ||||||||||||||    
T  1663192 atcatttagtcccttaacttatttttggatttcactttgatccattaactataaagtgtcttaatttggtcctataaatcttctgccgtttactattttg 1663291  T
Q  267 gtcatcttcgttaat 281  Q
    ||| ||| |||||||    
T  1663292 gtcttctccgttaat 1663306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 12933749 - 12933858
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| |||||||| ||| |||||||||||||| | ||| |||||| | | |||| ||||||||||||||||||| |||||||| ||||||| |||||||    
T  12933749 ttaatatatcatttagtcccttaacttatttttggttttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttctgccgtttac 12933848  T
Q  260 tattttggtc 269  Q
     |||| ||||    
T  12933849 catttcggtc 12933858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 167 - 291
Target Start/End: Complemental strand, 12936213 - 12936089
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||| ||| |||||||||||||| | ||| |||||||| | |||| ||||||||||||||||||||||  |||| |||| ||  |||||| ||||||    
T  12936213 atcatttagtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgctgtttaccattttg 12936114  T
Q  267 gtcatcttcgttaattttttaatgt 291  Q
    ||||| | ||||  |||||||||||    
T  12936113 gtcatttccgtttgttttttaatgt 12936089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 15509204 - 15509312
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||  |||||||||||||| | |||| |||||||||||||||||||||| | ||  ||||||| ||||  |||||||||||     
T  15509204 tttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctattttggtcc 15509303  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  15509304 tctccgtta 15509312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 161 - 285
Target Start/End: Original strand, 40058017 - 40058141
Alignment:
Q  161 taatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttact 260  Q
    |||| |||| |||| ||||||||||||||||| | ||| |||||| | |  ||| ||| |||||| |||| |||||||||||| ||||||| |||||||     
T  40058017 taatatatcgtttgatctcttaacttatttttggttttcattttgatcccttaactattaagtgtttcaaattggtctcataactcttctgccgtttacc 40058116  T
Q  261 attttggtcatcttcgttaattttt 285  Q
    ||||||||||||| ||||| |||||    
T  40058117 attttggtcatctccgttagttttt 40058141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 291
Target Start/End: Complemental strand, 15857680 - 15857605
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 291  Q
    |||||||||| |||||||| || |||||||||| |||||||||| ||||||||||||| ||||| |||||||||||    
T  15857680 tataaagtgtttcaatttgttcccataaatcttatgtcgtttaccattttggtcatctccgttagttttttaatgt 15857605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 7345489 - 7345399
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||||||||||  |||| |||||||| |||||| |||||||||||||||||||||| ||||||| || |||||||  || ||||||||    
T  7345489 cttaacttatttttgaatttcattttggtcctctaactataaagtgtctcaatttggtcccataaatattttgtcgttatctcttttggtc 7345399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 286
Target Start/End: Complemental strand, 8762518 - 8762392
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| |||| ||||||| |||||||||||||||  ||| | |||||| |  | | |||||| ||||||||||||||| ||||||| || ||||||||||    
T  8762518 ttaatatatcgtttggtcccttaacttatttttaattttcaatttggtcccatgactataaaatgtctcaatttggtcacataaattttatgtcgtttac 8762419  T
Q  260 tattttggtcatcttcgttaatttttt 286  Q
    |||||| ||| ||| ||||||| ||||    
T  8762418 tattttagtcctctccgttaatatttt 8762392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 12947910 - 12948019
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgttta 258  Q
    ||||| |||||||| ||| |||||||||||||| |||||| |||||| | | |||| ||||||||||||||||||| |||||||| |||| |||||||||    
T  12947910 ttaatatatcatttagtcccttaacttattttt-gattttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttatgtcgttta 12948008  T
Q  259 ctattttggtc 269  Q
    | |||| ||||    
T  12948009 ccatttcggtc 12948019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 18693707 - 18693805
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||| ||||||||||||||  ||||||||||||| |  ||| |||||| ||||||||| ||||| ||||||||||||||||||  || ||||||||    
T  18693707 tttggtcccttaacttatttttgaattttattttggtcccttaactataaaatgtctcaatctggtcccataaatcttctgtcgttacctcttttggtc 18693805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 21387646 - 21387744
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||| ||||||||||||||  |||| |||||||| | |||| |||||| ||||||||||||||| ||||||||||||| ||||  || ||||||||    
T  21387646 tttggtcccttaacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtcccataaatcttctgccgttacctcttttggtc 21387744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 332
Target Start/End: Complemental strand, 22812498 - 22812332
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| ||||||||||||||   ||| ||||| || |  ||| |||||| ||||||| |||| || |||||||||||||  |||||||||||||    
T  22812498 atcatttggtcccttaacttattttttattttcattttagtcccttaactataaaatgtctcactttgatcccataaatcttctgcagtttactattttg 22812399  T
Q  267 gtcatcttcgtta-attttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 332  Q
    |||  || |||||  ||||||||||| || || | ||||||| |||| ||||| | |||||||||||    
T  22812398 gtcccctccgttagtttttttaatgtttaatatttttgatatgatttcaaccattcgattgcaggtc 22812332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 167 - 332
Target Start/End: Complemental strand, 12950371 - 12950206
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||| ||| |||||||||||| | | ||| |||||||| | |||| ||||||||||||||||||||||  |||| |||| ||  |||||| ||||||    
T  12950371 atcatttagtcccttaacttatttatggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgatgtttaccattttg 12950272  T
Q  267 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 332  Q
    ||||| | ||||  ||||||||||| || || | || ||||  ||| ||||| |||||||| ||||    
T  12950271 gtcatttccgtttgttttttaatgtttactattttttatattgtttcaaccatttgattgctggtc 12950206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 42510168 - 42510237
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||  ||| ||||| |||||    
T  42510168 tataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctccgttagttttt 42510237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 279
Target Start/End: Complemental strand, 4568081 - 4567973
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||| | ||  ||||||||||||    
T  4568081 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgcctttacctattttggtca 4567982  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  4567981 tctccgtta 4567973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 279
Target Start/End: Complemental strand, 10085966 - 10085844
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctct-aattataaagtgtctcaatttggtctcataaatcttctgtcgt 255  Q
    ||||||||  ||||||||||| ||||||||||||||  |||| | |||||| |||| || | |||||||| ||||||||||| |||||||||||||   |    
T  10085966 ggtttaatacatcatttggtcccttaacttatttttgaatttcactttggt-ctcttaactttaaagtgtttcaatttggtcccataaatcttctgctat 10085868  T
Q  256 ttactattttggtcatcttcgtta 279  Q
    |||||||||||||| ||| |||||    
T  10085867 ttactattttggtcctctccgtta 10085844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 32521703 - 32521758
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 234  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||||||||||||    
T  32521703 cttaacttatttttagattttattttggtcccctaactataaagtgtctcaatttg 32521758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 5061037 - 5061103
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||| ||||| |||||||| | ||||| |||||||||||||||||||||    
T  5061037 tttggtcccttaacttatttttggatttcattttggtcccctaatgataaagtgtctcaatttggtc 5061103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 269
Target Start/End: Original strand, 26403325 - 26403414
Alignment:
Q  180 ttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||||||||| |||||| | |||||| |  ||| ||||||||||||||||||| |||||||||| || ||||||||||||||||||||    
T  26403325 ttaacttattttt-gattttcaatttggtcccttaactataaagtgtctcaatttgatctcataaattttatgtcgtttactattttggtc 26403414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 269
Target Start/End: Complemental strand, 26404321 - 26404219
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||| || ||||| |||||| |   ||||| |||||| || ||| ||||||||||||||||||| || |||||||||| |||| ||||||||||||    
T  26404321 atcatttgatcccttaatttatttatgatttttaatttggtcctttaactataaagtgtctcaatttgatcccataaatcttatgtcatttactattttg 26404222  T
Q  267 gtc 269  Q
    |||    
T  26404221 gtc 26404219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 291
Target Start/End: Complemental strand, 18695754 - 18695634
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| ||||| |||||||| | ||| |||||  | |  ||| |||||||||||||||||||||| ||||| |||||   ||||||||| | ||||||    
T  18695754 tttggtcccttaatttatttttggttttcattttattcccttaactataaagtgtctcaatttggtcccataagtcttcatccgtttactaatatggtca 18695655  T
Q  271 tcttcgttaattttttaatgt 291  Q
    ||| ||||| |||||||||||    
T  18695654 tctccgttagttttttaatgt 18695634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 32734190 - 32734254
Alignment:
Q  221 agtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||||||| | ||||| |||||    
T  32734190 agtgtcttaatttggtcccataactcttctgtcgtttactattttggtcatttccgttagttttt 32734254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 1273458 - 1273383
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttgg 235  Q
    ||||| |||| ||||||| |||||||||||||| | ||| |||||||| |  ||||||||||||||||||||||||    
T  1273458 ttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccttaattataaagtgtctcaatttgg 1273383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 286
Target Start/End: Original strand, 10084667 - 10084722
Alignment:
Q  231 tttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatttttt 286  Q
    |||||||||||||||||| |||||||||||||||||||| ||| ||||||| ||||    
T  10084667 tttggtctcataaatcttttgtcgtttactattttggtcctctccgttaatatttt 10084722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 273
Target Start/End: Original strand, 4566960 - 4567062
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||| ||||||  ||||| |||||| | | |||| |||||||||||||||||||||| | ||  ||||||||||||  || |||||||||    
T  4566960 tttggtcccttaacatattttcggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtca 4567059  T
Q  271 tct 273  Q
    |||    
T  4567060 tct 4567062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 5062293 - 5062227
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| ||||||||||||||  |||| |||||||| | ||||| |||||||||||||||||||||    
T  5062293 tttggtcccttaacttatttttgaatttcattttggtcccctaatgataaagtgtctcaatttggtc 5062227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 160 - 286
Target Start/End: Complemental strand, 40059446 - 40059320
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| ||| |||||||| |||||||||||||| | ||| |||||| | | |||| ||| |||||| | || ||||||  |||| ||||||| ||||||     
T  40059446 ttaatatataatttggtcccttaacttatttttggttttcattttgatcccctaactattaagtgttttaaattggtccaataactcttctgccgtttat 40059347  T
Q  260 tattttggtcatcttcgttaatttttt 286  Q
     |||||||| |||| ||||||||||||    
T  40059346 cattttggtgatctccgttaatttttt 40059320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 12830996 - 12830931
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    ||||||||||||||||||  |||| |||||||  |||||||||||||||| ||| |||||||||||    
T  12830996 aagtgtctcaatttggtcctataactcttctgctgtttactattttggtcctctccgttaattttt 12830931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 12862976 - 12862911
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    ||||||||||||||||||  |||| |||||||  |||||||||||||||| ||| |||||||||||    
T  12862976 aagtgtctcaatttggtcctataactcttctgctgtttactattttggtcctctccgttaattttt 12862911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 22819607 - 22819558
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  22819607 aagtgtctcaatttggtcccataactcttctgccgtttactattttggtc 22819558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 15510370 - 15510304
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||  ||||| |||||| | | |||| ||||||||||||||||||||||    
T  15510370 tttggtcccttaacttattttcggatttcattttgatcccctaactataaagtgtctcaatttggtc 15510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 22819564 - 22819510
Alignment:
Q  231 tttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||| ||||| |||||    
T  22819564 tttggtcccataactcttctgccgtttactattttggtcatctccgttagttttt 22819510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 26912437 - 26912347
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||||||||| | ||| |||||||||  |||||||||||||| || ||||| |||  |||| |||||| |||||||| ||| |||||    
T  26912437 cttaacttattttttgttttcattttggtttcctaattataaagtgacttaatttagtcctataattcttctatcgtttacaattgtggtc 26912347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 32522029 - 32521963
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||||||||| |||||||  ||||| |||||||| | |||| |||| |||||||||||||||||    
T  32522029 tttggtctcttaatttattttcggatttcattttggtcccctaactatagagtgtctcaatttggtc 32521963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 334
Target Start/End: Complemental strand, 32735545 - 32735423
Alignment:
Q  212 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcatt 311  Q
    ||||||| || ||| | ||||||||| ||||| ||||||| |||||| ||||||||||||||  |||| | ||||||||| || || | || |||| |||    
T  32735545 taattattaaatgttttaatttggtcccataactcttctgccgtttattattttggtcatctctgttagtattttaatgtctaatattttttatataatt 32735446  T
Q  312 ttaaccacttgattgcaggtcta 334  Q
    | |||   |||||||||||||||    
T  32735445 tcaacagtttgattgcaggtcta 32735423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 294
Target Start/End: Complemental strand, 42511728 - 42511650
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtata 294  Q
    ||||||||||||||||||| |  ||||||||||||| ||||| |||||||||  |||| ||||  |||| |||||||||    
T  42511728 tataaagtgtctcaatttgcttccataaatcttctgccgtttcctattttggctatctccgttggttttctaatgtata 42511650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 326398 - 326451
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||||||||||||||||  |||||||||||||| |||||  |||||||||    
T  326398 tataaagtgtctcaatttggttgcataaatcttctgttgtttatcattttggtc 326451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 2167572 - 2167523
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||| ||||||||||| ||||||||||||| |||||| ||||||||||    
T  2167572 aagtgtttcaatttggtcccataaatcttctgccgtttattattttggtc 2167523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 22650726 - 22650669
Alignment:
Q  180 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  22650726 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 22650669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 33362688 - 33362631
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaa 214  Q
    |||||||| |||||||||||| |||||||||||||| | ||||| |||||| ||||||    
T  33362688 ggtttaatatatcatttggtcccttaacttattttttgtttttaatttggtcctctaa 33362631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 285
Target Start/End: Original strand, 38471307 - 38471412
Alignment:
Q  180 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 279  Q
    |||||||||||||  |||| |||||||| |  ||| | |||| ||| ||||||||||  ||||||||||||  ||||||||||||||||  |||  ||||    
T  38471307 ttaacttatttttgaatttcattttggtcccttaactttaaattgtttcaatttggttccataaatcttcttccgtttactattttggttctctctgtta 38471406  T
Q  280 attttt 285  Q
    ||||||    
T  38471407 attttt 38471412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 20988699 - 20988767
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 239  Q
    ||||||| |||||||||||||   |||| |||||||| | |||| |||||||||||||||||| |||||    
T  20988699 tttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttagtctc 20988767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 24761787 - 24761719
Alignment:
Q  212 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaa 280  Q
    ||||||| ||||||||||||||| |||||||| || |||| ||||||| |||||| || ||| ||||||    
T  24761787 taattattaagtgtctcaatttgatctcataactcgtctgccgtttaccattttgttcctctccgttaa 24761719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 24805296 - 24805335
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttgg 206  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  24805296 atcatttggtctcttaacttatttttggtttttattttgg 24805335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 15153886 - 15153952
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| ||||||||||||||  |||||| |||||| || ||| | |||| |||||||||||||||    
T  15153886 tttggtcccttaacttatttttgaattttaatttggtcctttaactttaaactgtctcaatttggtc 15153952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 19050758 - 19050824
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||| ||||| | |||||| | |||| | |||| |||||||||||||||    
T  19050758 tttggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttggtc 19050824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 21389200 - 21389130
Alignment:
Q  221 agtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 291  Q
    ||||||||||||||||| ||||| |||||   ||||||||| | ||||| ||| ||||| |||||||||||    
T  21389200 agtgtctcaatttggtcccataagtcttcctccgtttactaatatggtcctctccgttagttttttaatgt 21389130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 223220 - 223313
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagattt-tattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 249  Q
    |||||||| |||| ||| ||| |||||||||||||||| |||  | |||||| | |||| |||||||||| | ||||||||| ||||| |||||    
T  223220 ggtttaatatatcgttttgtcccttaacttatttttagttttccactttggtcccctaactataaagtgtattaatttggtcccataagtcttc 223313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 1982721 - 1982793
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||| ||||||||||||||  ||||||||||||| |  ||| | |||| | ||||||||||||| |||||    
T  1982721 tttggtcccttaacttatttttgaattttattttggtcccttaactttaaactatctcaatttggtcccataa 1982793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 12952841 - 12952769
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||| ||||||||||||||| |||| |||||||| |  ||| | ||||  |||||||||||||| |||||    
T  12952841 tttggtcccttaacttatttttaaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 12952769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 28237000 - 28236928
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||| ||||||||||||||  |||| ||||| || || ||||| ||||  |||||||||| |||||||||    
T  28237000 tttggtcccttaacttatttttgaatttcattttagtcctttaattttaaaccgtctcaatttagtctcataa 28236928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 37371066 - 37371138
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||| | |||| ||||||||||||||| |||||    
T  37371066 tttggtcccttaacttatttttgaatttcattttggtcccttaactttaaattgtctcaatttggtcccataa 37371138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 41905180 - 41905240
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtct 227  Q
    ||||||||||| |||||||||||||| | ||| |||||||| | |||| |||||| |||||    
T  41905180 atcatttggtcccttaacttatttttggttttcattttggtcccctaactataaaatgtct 41905240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 157 - 365
Target Start/End: Complemental strand, 48577 - 48369
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 256  Q
    ||||||||  ||||||||||| |||||||||||||| ||||| |||||||| || ||| ||||||||||||||||||| || ||||||| ||||| ||||    
T  48577 ggtttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtt 48478  T
Q  257 tactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatc 356  Q
    |||| |||||||||||| ||||||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  48477 tactcttttggtcatctccgttaattttttaaaatatattattcttgatataattttaaccacttgattgcaggtctatagtatctaagagtgaaccatc 48378  T
Q  357 aacacttga 365  Q
    |||||||||    
T  48377 aacacttga 48369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 47075 - 47193
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| ||||||||||||||  |||| |||||| | |  ||| | |||| ||||||||||||||| ||||||||||||  ||||||||||||||    
T  47075 atcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttg 47174  T
Q  267 gtcatcttcgttaattttt 285  Q
    ||| ||| |||||||||||    
T  47175 gtcctctccgttaattttt 47193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 1e-66; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 157 - 365
Target Start/End: Original strand, 27438785 - 27438993
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 256  Q
    ||||||||  ||||||||||| |||||||||||||| ||||| |||||||| || ||| ||||||||||||||||||| || ||||||| ||||| ||||    
T  27438785 ggtttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtt 27438884  T
Q  257 tactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatc 356  Q
    |||| |||||||||||| ||||||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  27438885 tactcttttggtcatctccgttaattttttaaaatatattattcttgatataattttaaccacttgattgcaggtctatagtatctaagagtgaaccatc 27438984  T
Q  357 aacacttga 365  Q
    |||||||||    
T  27438985 aacacttga 27438993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 13800096 - 13800233
Alignment:
Q  227 tcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattg 326  Q
    ||||||||||| ||||||||||    ||| |||| |||||||  | || |||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  13800096 tcaatttggtcccataaatctttctccgtatactgttttggttttttt-gttagttttttaatgtatattattcttgatatcattttaaccacttgattg 13800194  T
Q  327 caggtctatggtaactaagagtgaaccatcaacacttga 365  Q
    ||||||||| |||  ||||||||||||||||||||||||    
T  13800195 caggtctatagtatttaagagtgaaccatcaacacttga 13800233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 22300002 - 22299895
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  22300002 cttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctccgtt 22299903  T
Q  279 aatttttt 286  Q
    | ||||||    
T  22299902 attttttt 22299895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 173 - 285
Target Start/End: Original strand, 9927617 - 9927728
Alignment:
Q  173 tggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatc 272  Q
    ||||| |||||||||||||| | ||||| |||||| | |||| |||||||||||||||||||||| |||||| ||||  |||||||||||||||||||||    
T  9927617 tggtcccttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaatttggtcccataaa-cttcaatcgtttactattttggtcatc 9927715  T
Q  273 ttcgttaattttt 285  Q
    | |||||||||||    
T  9927716 tccgttaattttt 9927728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 269
Target Start/End: Original strand, 5311284 - 5311386
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | ||| || | |||| ||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  5311284 atcatttggtcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcctataaatcttatgtcgtttactattttg 5311383  T
Q  267 gtc 269  Q
    |||    
T  5311384 gtc 5311386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 27440286 - 27440168
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| ||||||||||||||  |||| |||||| | |  ||| | |||| ||||||||||||||| ||||||||||||  ||||||||||||||    
T  27440286 atcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttg 27440187  T
Q  267 gtcatcttcgttaattttt 285  Q
    ||| ||| |||||||||||    
T  27440186 gtcctctccgttaattttt 27440168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 8412424 - 8412315
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||| |||||||||||||| | ||| | ||| || | |||| |||||||||||||||||||||| |||||||||| || |||||||||||||||||    
T  8412424 atttggtcccttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtttactattttggtc 8412325  T
Q  270 atcttcgtta 279  Q
     ||| |||||    
T  8412324 ctctccgtta 8412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 264
Target Start/End: Complemental strand, 34084257 - 34084148
Alignment:
Q  153 aattggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgt 252  Q
    |||||| |||||  ||||||||||| |||||||||||| | | ||| | |||||| ||  || |||||||||||||||||||||||||||||||||||||    
T  34084257 aattggcttaatacatcatttggtcccttaacttatttctggttttcactttggtcct--aaatataaagtgtctcaatttggtctcataaatcttctgt 34084160  T
Q  253 cgtttactattt 264  Q
    ||||||| ||||    
T  34084159 cgtttaccattt 34084148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 155 - 285
Target Start/End: Complemental strand, 293764 - 293633
Alignment:
Q  155 ttggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctc-taattataaagtgtctcaatttggtctcataaatcttctgtc 253  Q
    |||| ||||| ||| |||||||||||||| ||||||||   ||||   || | |||| |||||||||||||| ||||||||||||||||| |||||||||    
T  293764 ttggcttaatatattatttggtctcttaatttatttttttgttttcaatttgatctcctaattataaagtgtttcaatttggtctcataagtcttctgtc 293665  T
Q  254 gtttactattttggtcatcttcgttaattttt 285  Q
    |||||| ||||||||| ||| |||| ||||||    
T  293664 gtttaccattttggtcctctccgtttattttt 293633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 286
Target Start/End: Original strand, 8411103 - 8411210
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||| | ||| | ||| || | |||| ||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||| ||||    
T  8411103 cttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcttataaatcttatgccgtttactattttggtcctctccgtt 8411202  T
Q  279 aatttttt 286  Q
    ||| ||||    
T  8411203 aatatttt 8411210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 19368625 - 19368540
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 256  Q
    ||||||| |||||||||||||  ||||| |||||||| |||||| |||||||||||||||||||||||| ||  ||||||||||||    
T  19368625 tttggtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtctcttatgtcttctgtcgtt 19368540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 285
Target Start/End: Original strand, 31738372 - 31738486
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||| ||||||||||| ||||| |||||||  |||||| |||||||||     
T  31738372 tttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataagtcttctgcggtttaccattttggtcc 31738471  T
Q  271 tcttcgttaattttt 285  Q
    ||| ||||| |||||    
T  31738472 tctccgttagttttt 31738486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 33802128 - 33802010
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||| |||||| || |||||||||||||| ||||||  | |||    
T  33802128 atcatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaatttgatcccataaatcttctgtagtttaccgtattg 33802029  T
Q  267 gtcatcttcgttaattttt 285  Q
    ||| ||| ||||| |||||    
T  33802028 gtcctctccgttagttttt 33802010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 170 - 291
Target Start/End: Original strand, 33807697 - 33807818
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||| || |||||||||||||| | ||| | |||||| |  ||| ||||||||||||||||||| |  ||||||| ||||| |||||||  ||||||||    
T  33807697 atttgatcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaatttgatgccataaattttctgccgtttaccgttttggtc 33807796  T
Q  270 atcttcgttaattttttaatgt 291  Q
     ||| |||||||||||||||||    
T  33807797 ctctccgttaattttttaatgt 33807818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 13173046 - 13173114
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 239  Q
    ||||||| |||||||||||||  |||||||||||||| | |||| ||||||||||||||||||||||||    
T  13173046 tttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtctc 13173114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 291
Target Start/End: Complemental strand, 31740379 - 31740259
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    |||||||  ||||||||||||| | ||| | |||||| |  ||| |||||||||||||||||||||| |||||||||| || ||||||| |||||||||     
T  31740379 tttggtcctttaacttattttttgttttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttatgccgtttaccattttggtcc 31740280  T
Q  271 tcttcgttaattttttaatgt 291  Q
    | | ||||  |||||||||||    
T  31740279 tatccgtttgttttttaatgt 31740259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 2138744 - 2138646
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||| ||||| |||||||| |||||||||||||| | |||| |||||||||||||||||| ||| | ||  ||||||||||||  || ||||||||    
T  2138744 tttggtcccttaatttatttttggattttattttggtcccctaactataaagtgtctcaatttagtcccttatgtcttctgtcgttacctcttttggtc 2138646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 26581962 - 26582059
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||| |||||||||||||| |||||||||||||| |  ||| ||||||||| |||||||||||| | || ||||| ||||| ||||| ||||||||    
T  26581962 tttggtcccttaacttatttttggattttattttggtcccttaactataaagtgactcaatttggtcccttatatcttttgtcg-ttactcttttggtc 26582059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 14328832 - 14328767
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||| ||| ||||| |||||    
T  14328832 aagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctccgttacttttt 14328767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 14421842 - 14421777
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||| ||| ||||| |||||    
T  14421842 aagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctccgttacttttt 14421777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 26584144 - 26584079
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggt 236  Q
    ||||||| |||||||||||||  |||||||||||||| | |||| |||||||||||||||||||||    
T  26584144 tttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggt 26584079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 266
Target Start/End: Original strand, 34083075 - 34083163
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaa-tttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||||||||||| ||| | ||||||   ||||||||||| |||||||| |||| |||||||||| ||| ||||||||||||||||    
T  34083075 cttaacttatttttagttttcactttggtctcctaattataaactgtctcaaatttgatctcataaattttcagtcgtttactattttg 34083163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 269
Target Start/End: Complemental strand, 18139598 - 18139496
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||  | ||| | |||| | |||||| ||||||||||||||| |||||| | || |||||||| |||||| | |||||    
T  18139598 atcatttggtcccttaacttattttccgttttcactttgatcctctaactataaagtgtctcaaattggtcccttatatcttctgccgtttattgttttg 18139499  T
Q  267 gtc 269  Q
    |||    
T  18139498 gtc 18139496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 18773671 - 18773729
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||||||||| ||||| |||||||| | ||||||||||| |||||||||||||||    
T  18773671 cttaacttatttttggatttcattttggtcccctaattataaaatgtctcaatttggtc 18773729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 22298613 - 22298711
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||  ||||||||||||| | ||| |||||||| |||||||| |||||||||||| |||| || ||||| | ||||| ||||||  |||||||||    
T  22298613 tttggtcctttaacttatttttggttttcattttggtcctctaattttaaagtgtctcagtttgatcccataactattctgccgtttataattttggtc 22298711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 8447238 - 8447296
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  8447238 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 8447296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 8456042 - 8456100
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  8456042 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 8456100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 28225433 - 28225499
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||   |||| |||||||| | |||| ||||||||||||||||||||||    
T  28225433 tttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 28225499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 19367734 - 19367792
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||||||||   |||| |||||||| | |||| ||||||||||||||||||||||    
T  19367734 cttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 19367792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 28226516 - 28226462
Alignment:
Q  180 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 234  Q
    ||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||    
T  28226516 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttg 28226462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 271
Target Start/End: Complemental strand, 13176441 - 13176340
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||| ||||| | |||||  ||||||||||| || | |||| |||||| ||||||||||||||||  ||  |||| |||||||  || ||||||||    
T  13176441 atttggtcccttaattcattttcggattttattttagtcccctaactataaaatgtctcaatttggtcttttatgtcttttgtcgttacctcttttggtc 13176342  T
Q  270 at 271  Q
    ||    
T  13176341 at 13176340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 14326215 - 14326260
Alignment:
Q  224 gtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||||||||| ||||| |||||| |||||||||||| |||||    
T  14326215 gtctcaatttggtcccataattcttctatcgtttactattgtggtc 14326260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 14419225 - 14419270
Alignment:
Q  224 gtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||||||||| ||||| |||||| |||||||||||| |||||    
T  14419225 gtctcaatttggtcccataattcttctatcgtttactattgtggtc 14419270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 12203370 - 12203306
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||||||||||  |||| |||||||| || ||| | |||| ||||||||||||||| |||||    
T  12203370 cttaacttatttttgaatttcattttggtcctttaactttaaactgtctcaatttggtcccataa 12203306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 17916576 - 17916504
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||| | |||| ||||||||||||||| |||||    
T  17916576 tttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcacataa 17916504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 2e-43; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 212 - 365
Target Start/End: Complemental strand, 14171334 - 14171181
Alignment:
Q  212 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcatt 311  Q
    |||||||||| ||| ||||||||||| |||||||| |||||| |||||||||||| |||| | | ||||||||||||||||||||| ||||||||| |||    
T  14171334 taattataaaatgtttcaatttggtcccataaatcatctgtcatttactattttgatcatttcctttaattttttaatgtatattattcttgatattatt 14171235  T
Q  312 ttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacacttga 365  Q
    ||||||||||||||||||||||||  ||  ||||||||||||||| ||||||||    
T  14171234 ttaaccacttgattgcaggtctataatatataagagtgaaccatccacacttga 14171181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 181 - 335
Target Start/End: Original strand, 26054916 - 26055070
Alignment:
Q  181 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaa 280  Q
    |||||||||||| ||||| |||||||| | |||| |||||||||| ||||||||||  |||||||||||||||||||||||||||||||  ||||||||     
T  26054916 taacttatttttggatttcattttggtcccctaactataaagtgtttcaatttggttccataaatcttctgtcgtttactattttggtctccttcgttag 26055015  T
Q  281 ttttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctat 335  Q
    |||||||||||  | || |  |||||| |||| ||||| | ||||||||||||||    
T  26055016 ttttttaatgtcaaatatttatgatataatttcaaccattagattgcaggtctat 26055070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 171 - 279
Target Start/End: Complemental strand, 26056254 - 26056146
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||| ||||| |||||||| | |||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||     
T  26056254 tttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttttgtcgtttactattttggtcc 26056155  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  26056154 tctccgtta 26056146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 157 - 291
Target Start/End: Original strand, 49139796 - 49139930
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 256  Q
    ||||||||  ||||||||||| |||||||||||||| | |||  ||||||| |  ||| |||||||||||||||||||||||||||||||||| |  |||    
T  49139796 ggtttaatacatcatttggtcccttaacttatttttggttttcgttttggtcccataactataaagtgtctcaatttggtctcataaatcttccgcagtt 49139895  T
Q  257 tactattttggtcatcttcgttaattttttaatgt 291  Q
    |||||||||||| |||| ||||| |||||||||||    
T  49139896 tactattttggtaatctccgttagttttttaatgt 49139930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 167 - 280
Target Start/End: Original strand, 3978049 - 3978162
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| ||||||||||||||  |||| |||||||| || ||| ||||||||||||||||||| || ||||| ||||||||||||||||||||||    
T  3978049 atcatttggtcccttaacttatttttgaatttcattttggtcctttaactataaagtgtctcaatttgatcccataattcttctgtcgtttactattttg 3978148  T
Q  267 gtcatcttcgttaa 280  Q
    ||| ||| ||||||    
T  3978149 gtcctctccgttaa 3978162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 179 - 286
Target Start/End: Original strand, 13641274 - 13641381
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  13641274 cttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctccgtt 13641373  T
Q  279 aatttttt 286  Q
    | ||||||    
T  13641374 attttttt 13641381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 216 - 294
Target Start/End: Complemental strand, 36511393 - 36511315
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtata 294  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  36511393 tataaagtgtctcaatttggtcccataaatcttctgtcgtttactattttggtcatctccgttagttttctaatgtata 36511315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 3979421 - 3979312
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||| |||||||||||||| ||||| |||||||| |  ||| |||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  3979421 atttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtc 3979322  T
Q  270 atcttcgtta 279  Q
     ||| |||||    
T  3979321 ctctccgtta 3979312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 25787275 - 25787163
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| ||||||||||||||||||||||||||||||||| || | ||||||||||||    
T  25787275 atcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtctcataaatcttatgccatttactattttg 25787176  T
Q  267 gtcatcttcgtta 279  Q
    ||| ||| |||||    
T  25787175 gtcctctccgtta 25787163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 170 - 286
Target Start/End: Complemental strand, 52181413 - 52181297
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||||  |||||||||||||   ||| | |||||| |||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  52181413 atttggtcctttaacttattttttattttcaatttggtcctctaactataaagtgtctcaatttagtctcataaatcttatgttgtttactattttggtc 52181314  T
Q  270 atcttcgttaatttttt 286  Q
    |||| ||||||| ||||    
T  52181313 atctccgttaatatttt 52181297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 167 - 269
Target Start/End: Complemental strand, 13930786 - 13930684
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||||| |||||| |||||||||||||||||||||| ||||| |||| |||||||||| ||||||    
T  13930786 atcatttggtcccttaacttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttaccattttg 13930687  T
Q  267 gtc 269  Q
    |||    
T  13930686 gtc 13930684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 167 - 269
Target Start/End: Complemental strand, 14071314 - 14071212
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| ||||| |||||||| | ||| | |||||| |||||| |||||||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  14071314 atcatttggtcccttaatttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttctgtcgtttaccattttg 14071215  T
Q  267 gtc 269  Q
    |||    
T  14071214 gtc 14071212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 167 - 269
Target Start/End: Original strand, 25785973 - 25786075
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  25785973 atcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgtcgtttattattttg 25786072  T
Q  267 gtc 269  Q
    |||    
T  25786073 gtc 25786075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 47410992 - 47411101
Alignment:
Q  170 atttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 268  Q
    |||||||| ||||| |||||||| |||||| | |||| | | |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  47410992 atttggtcccttaaattattttt-gattttcaatttgatcccctaactataaagtgtctcaatttggtctcataaatcttatgtcgtttactattttggt 47411090  T
Q  269 catcttcgtta 279  Q
    ||||| |||||    
T  47411091 catctccgtta 47411101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 14390267 - 14390375
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| ||||||||||||||  |||| |||||||| |||||| |||||| ||||||||||||||  |||||||||||| |||||||| |||||||||     
T  14390267 tttggtcccttaacttattttttaatttcattttggtcctctaactataaaatgtctcaatttggttccataaatcttctttcgtttaccattttggtcc 14390366  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  14390367 tctccgtta 14390375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 291
Target Start/End: Complemental strand, 50679928 - 50679808
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||||| |||||||||||| |  ||| |||||||||||||||||||||| ||||| |||||   ||||||||| | |||||     
T  50679928 tttggtcccttaacttatttttagtttttattttggtcccttaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatatggtcc 50679829  T
Q  271 tcttcgttaattttttaatgt 291  Q
    ||| ||||| |||||||||||    
T  50679828 tctccgttagttttttaatgt 50679808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 167 - 280
Target Start/End: Original strand, 48467266 - 48467378
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||||||| |||| |||||||||| ||||||||||||| |||||||| ||||  ||||| |||||    
T  48467266 atcatttggtcccttaacttattttttgttttcaatttggttccctaactataaagtgtttcaatttggtctcttaaatcttatgtc-attactgttttg 48467364  T
Q  267 gtcatcttcgttaa 280  Q
    ||||||| ||||||    
T  48467365 gtcatctccgttaa 48467378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 16217457 - 16217557
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||| | ||||| |||| |  ||||| ||||||||||||||||||||||  ||||||||| |||| ||||||||||||||||||| ||||    
T  16217457 cttaacttatttttggtttttaatttgatcatctaactataaagtgtctcaatttggtcctataaatcttatgtcatttactattttggtcatctccgtt 16217556  T
Q  279 a 279  Q
    |    
T  16217557 a 16217557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 266
Target Start/End: Original strand, 21277002 - 21277098
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||| |||||||||||||| | ||| | |||||||  |||| |||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  21277002 atttggtcccttaacttatttttggttttcaatttggttgcctaactataaagtatctcaatttggtcccataaatcttctgccgtttactattttg 21277098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 160 - 288
Target Start/End: Original strand, 52741486 - 52741614
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| |||||||||||| |||||||||||||| | |||||||||||| |||||| ||||||||||||||| ||| || | ||  ||||||||| ||||     
T  52741486 ttaatatatcatttggtcccttaacttatttttcgtttttattttggtcctctaactataaagtgtctcaaattgatcccttatgtcttctgtcatttat 52741585  T
Q  260 tattttggtcatcttcgttaattttttaa 288  Q
    | |||||||| ||| | ||| ||||||||    
T  52741586 tgttttggtcctctccattagttttttaa 52741614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 266
Target Start/End: Complemental strand, 47411559 - 47411460
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||  | |||   |||||||| |||| |||||||||||||||||||||| |||||||||| || ||||||||||||||    
T  47411559 atcatttggtcccttaacttattttcggttttccatttggttccctaactataaagtgtctcaatttggtcccataaatcttatgccgtttactattttg 47411460  T

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Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 9592278 - 9592367
Alignment:
Q  202 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 291  Q
    |||||| | |||| |||||||||| |||||||| || |||||||||| ||||||||||||||||| |||| | |||||||||||||||||    
T  9592278 tttggtcccctaactataaagtgtttcaatttgatcccataaatcttttgtcgtttactattttgatcatttccgttaattttttaatgt 9592367  T

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Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 269
Target Start/End: Original strand, 34531653 - 34531770
Alignment:
Q  152 taattggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctg 251  Q
    |||||||||||||  ||  ||||||| |||||||||||||  ||||| |||||||| |||||| |||||| ||||||||||||||||| ||  |||||||    
T  34531653 taattggtttaatacatgctttggtcccttaacttattttcggatttcattttggtcctctaactataaaatgtctcaatttggtctcttatgtcttctg 34531752  T
Q  252 tcgtttactattttggtc 269  Q
    |||||  || ||||||||    
T  34531753 tcgttatctcttttggtc 34531770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 279
Target Start/End: Complemental strand, 42248401 - 42248304
Alignment:
Q  182 aacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 279  Q
    ||||||||||| ||||| |||||||| |  ||| ||||||||||||||||||||||  ||||||||| |||||||||| ||||| ||| |||||||||    
T  42248401 aacttatttttggatttcattttggtcccataactataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctcttcgtta 42248304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 13568552 - 13568484
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 239  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||| ||||||||||| |||||||||||||    
T  13568552 tttggtcccttaacttatttttagattttattttgattccctatttataaagtgtttcaatttggtctc 13568484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 20953297 - 20953405
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||  |||||||||  ||| ||||| ||||| |||     
T  20953297 tttggtcccttaacttatttttggatttcattttagttctataactataaagtgtctcaatttggtcctataaatcttaagtcatttaccattttagtcc 20953396  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  20953397 tctccgtta 20953405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 47136798 - 47136686
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||| ||  ||||||||||||| | ||| | || ||| | |||| ||||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  47136798 atcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgtttactattttg 47136699  T
Q  267 gtcatcttcgtta 279  Q
    ||| ||| |||||    
T  47136698 gtcctctccgtta 47136686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 19466281 - 19466198
Alignment:
Q  202 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||| || ||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||| ||||| |||||    
T  19466281 tttggtcctttaactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattgtggttctctccgttagttttt 19466198  T

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Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 167 - 332
Target Start/End: Original strand, 13929300 - 13929465
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||||| |  ||| |||||||||||||||||||||| | ||||||||||  ||||||  || |||    
T  13929300 atcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtcccgtaaatcttcttccgtttatcatcttg 13929399  T
Q  267 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 332  Q
    ||| | | |||| |||||||||||| || || | |||||||  |||| |||| | ||| |||||||    
T  13929400 gtcctgtccgtttattttttaatgtctaatatttttgatattgttttgaccattcgatggcaggtc 13929465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 211 - 279
Target Start/End: Complemental strand, 16218545 - 16218477
Alignment:
Q  211 ctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 279  Q
    |||| |||||||| ||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||    
T  16218545 ctaactataaagtatctcaatttggtcccataaatcttatgtcgtttaatattttggtcatctccgtta 16218477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 294
Target Start/End: Original strand, 47560144 - 47560271
Alignment:
Q  167 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    ||||||||||| |||| ||||||||  |||||| | |||||| | |||| |||||||||| |||||||| ||   ||||| ||||| |||||||| ||||    
T  47560144 atcatttggtcccttaccttattttc-gattttcactttggtcccctaactataaagtgtttcaatttgatcctttaaatattctgccgtttactgtttt 47560242  T
Q  266 ggtcatcttcgttaattttttaatgtata 294  Q
    |||||||| |||||||||||| |||||||    
T  47560243 ggtcatctccgttaattttttgatgtata 47560271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 51424260 - 51424328
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 239  Q
    ||||||| |||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||||||||    
T  51424260 tttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtctc 51424328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 202 - 269
Target Start/End: Original strand, 14169659 - 14169726
Alignment:
Q  202 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||| || ||| |||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  14169659 tttggtcctttaactataaaatgtctcaatttggtcccataaatcttttgtcgtttactattttggtc 14169726  T

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Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 1061337 - 1061403
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| ||||||||||||| ||||||||||||||| | | || ||||||||||||||||||||||    
T  1061337 tttggtcgcttaacttattttcagattttattttggtccccaaactataaagtgtctcaatttggtc 1061403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 33941326 - 33941392
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| ||||||||||||||  ||||||||||||| || |||||||||| |||||||||||||||    
T  33941326 tttggtcccttaacttatttttgaattttattttggtcctttaattataaaatgtctcaatttggtc 33941392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 2236822 - 2236907
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 256  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||||||||    
T  2236822 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgtt 2236907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 19464650 - 19464711
Alignment:
Q  212 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatct 273  Q
    |||||||||||||| ||||||||||  || |||||||||| |||||||||||||||||||||    
T  19464650 taattataaagtgtttcaatttggttccacaaatcttctgccgtttactattttggtcatct 19464711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 51726906 - 51726857
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  51726906 tataaagtgtctcaatttggttccataaatcttctgtcgtttactatttt 51726857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 279
Target Start/End: Complemental strand, 2238085 - 2237977
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||  ||||| |||||||| |  ||| |||||||||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  2238085 tttggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 2237986  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  2237985 tctccgtta 2237977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 9119813 - 9119877
Alignment:
Q  173 tggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||| |||||||||||||  ||||||| |||||| |||||| ||||||||||||||||||||||    
T  9119813 tggtcccttaacttattttcggattttaatttggtcctctaactataaagtgtctcaatttggtc 9119877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 35683064 - 35683172
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||| ||||  || ||||||||     
T  35683064 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcc 35683163  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  35683164 tctccgtta 35683172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 279
Target Start/End: Complemental strand, 48935209 - 48935109
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||| ||||  || |||||||||||| ||||    
T  48935209 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcatctccgtt 48935110  T
Q  279 a 279  Q
    |    
T  48935109 a 48935109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 14312783 - 14312850
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||| |||||||||||||| ||||||||||||||   |||  ||||||||||||||||||||||    
T  14312783 atttggtcccttaacttatttttggattttattttggtctcctagctataaagtgtctcaatttggtc 14312850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 13642664 - 13642566
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||  ||||||||||||| | ||| |||||||| |||||||| |||||||||||| |||| || ||||| | ||||| ||||||  |||||||||    
T  13642664 tttggtcctttaacttatttttggttttcattttggtcctctaattttaaagtgtctcagtttgatcccataactattctgccgtttataattttggtc 13642566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 48974513 - 48974447
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||  ||||| |||||||||| |||| ||||||||||||||| ||||||    
T  48974513 tttggtcccttaacttattttcggatttcattttggttccctaactataaagtgtctcaacttggtc 48974447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 14764279 - 14764340
Alignment:
Q  212 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatct 273  Q
    ||||||| |||||| | ||||||||||||||| |||||||||||||||| |||| |||||||    
T  14764279 taattattaagtgtgttaatttggtctcataagtcttctgtcgtttactgttttagtcatct 14764340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 36509865 - 36509934
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||||||| ||||||||||  ||||||||||||| ||||||||||||||||  ||| ||||| |||||    
T  36509865 tataaagtgtttcaatttggttccataaatcttctgccgtttactattttggttctctccgttagttttt 36509934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 279
Target Start/End: Complemental strand, 35684309 - 35684202
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    |||||||  ||||||||||||  |||||||||||||| | |||| |||||| ||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  35684309 tttggtccattaacttattttcggattttattttggtcccctaactataaa-tgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 35684211  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  35684210 tctccgtta 35684202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 40135436 - 40135372
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    |||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| ||| |||||    
T  40135436 cttaacttatttttagatttcattttggtcctctaactttaaaatgtctcaattttgtcacataa 40135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 47512191 - 47512119
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||||||||||||||||||  |||| |||||||| |  ||| | |||| |||||||||||||||||||||    
T  47512191 tttggtctcttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtctcataa 47512119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 1873953 - 1873898
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 234  Q
    ||||||||||||| | ||||||||||||| | |||| |||||||||||||||||||    
T  1873953 cttaacttattttcaaattttattttggtcccctaactataaagtgtctcaatttg 1873898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 2973128 - 2973049
Alignment:
Q  158 gtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| ||| ||||| || |||||||||||||| | ||| ||||| || |  ||||||||||||||||||||||||||    
T  2973128 gtttaatatattatttgatcccttaacttattttttgttttcattttagtcccttaattataaagtgtctcaatttggtc 2973049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 1061559 - 1061493
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||| ||||||||||||||||| ||||| ||||| || | |||| |||||||||||| |||||||||    
T  1061559 tttgctctcttaacttatttttggatttcattttagtcccctaactataaagtgtcttaatttggtc 1061493  T

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Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 1898013 - 1898079
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| ||||||||||||||  |||||| |||||||| |||| | |||| |||||||||||||||    
T  1898013 tttggtcccttaacttatttttgaattttaatttggttccctaactttaaattgtctcaatttggtc 1898079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 13567175 - 13567237
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 233  Q
    |||||||  ||||||||||||| ||||| |||||  ||| |||||||||||||||||||||||    
T  13567175 tttggtcctttaacttatttttggatttcattttaattccctaattataaagtgtctcaattt 13567237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 34532809 - 34532743
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||  ||||||||||||   ||||||||||||| | |||| ||||||||||||||||||||||    
T  34532809 tttggtcctttaacttattttcgaattttattttggtcccctaactataaagtgtctcaatttggtc 34532743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 48934258 - 48934316
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  48934258 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 48934316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 9123506 - 9123442
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttgg 235  Q
    ||||||| |||||||||||||  |||||||||||||| |  ||| |||||||||| |||||||||    
T  9123506 tttggtcccttaacttattttcggattttattttggtcccttaactataaagtgtttcaatttgg 9123442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 9633770 - 9633862
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 249  Q
    ||||||||  || ||||||||  ||||||||||||| | ||| |||||||| |  ||| |||||||||||||||||||||   ||||||||||    
T  9633770 ggtttaatacataatttggtcctttaacttatttttggttttcattttggtcccttaactataaagtgtctcaatttggttatataaatcttc 9633862  T

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Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 22167837 - 22167885
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 268  Q
    |||||| ||||||||||| ||||||||||||| |||||| |||||||||    
T  22167837 aagtgtttcaatttggtcccataaatcttctgccgtttattattttggt 22167885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 328
Target Start/End: Original strand, 24516392 - 24516500
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccac 319  Q
    |||||| ||||||||||||||||| |||||   |||||| || | |||||  |   |||| ||||||||||||||  | ||||||||| ||||||||||     
T  24516392 aagtgtgtcaatttggtctcataagtcttcctccgtttattaatgtggtcccccctgttagttttttaatgtataaaattcttgatatgattttaaccat 24516491  T
Q  320 ttgattgca 328  Q
    |||||||||    
T  24516492 ttgattgca 24516500  T

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Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 32823467 - 32823539
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||| ||||||||||||||  ||||||||||||| |  ||| | |||| ||||||||||||||| |||||    
T  32823467 tttggtcccttaacttatttttgaattttattttggtcccttaactttaaactgtctcaatttggtcccataa 32823539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 230
Target Start/End: Original strand, 33793767 - 33793847
Alignment:
Q  150 aataattggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaa 230  Q
    |||| |||| |||||  |||||||| || |||||||||||||| | ||| | |||||| | ||||||||||||||||||||    
T  33793767 aatatttggcttaatacatcatttgatcccttaacttatttttggttttcactttggtcccctaattataaagtgtctcaa 33793847  T

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Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 44340168 - 44340104
Alignment:
Q  173 tggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||| |||| ||||||||| ||||| |||||| | | ||||||||||||||||||| |||||||    
T  44340168 tggtcccttatcttatttttggatttcattttgatcccctaattataaagtgtctcattttggtc 44340104  T

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Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 285
Target Start/End: Original strand, 45570314 - 45570441
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 256  Q
    ||||||||| |||||  |||| ||||||||||||| |  ||| | ||||||||  ||| ||| || |||||||| |||||||||||| ||||||| | ||    
T  45570314 ggtttaatgcatcatccggtcccttaacttatttt-atttttcagtttggttccttaactatcaaatgtctcaacttggtctcataactcttctgccatt 45570412  T
Q  257 tactattttggtcatcttcgttaattttt 285  Q
      |||||||||||  ||| ||||||||||    
T  45570413 acctattttggtccactttgttaattttt 45570441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 32823639 - 32823576
Alignment:
Q  180 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    |||||||||||||  ||||||||||||| | |||| | |||| ||||||||||||||| |||||    
T  32823639 ttaacttatttttgaattttattttggtcccctaactttaaactgtctcaatttggtcccataa 32823576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 42244513 - 42244576
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 234  Q
    ||||||| |||||||||||||| ||||| ||||||||  | ||| |||||| ||||||||||||    
T  42244513 tttggtcccttaacttatttttggatttcattttggtcatataactataaaatgtctcaatttg 42244576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 354
Target Start/End: Original strand, 14429868 - 14429946
Alignment:
Q  276 gttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaacca 354  Q
    |||| ||||||||||| || || ||||||||| |||||||||  |||||||  |||||||| || |||| |||||||||    
T  14429868 gttatttttttaatgtctaatattcttgatatgattttaaccgtttgattgtgggtctatgatatctaacagtgaacca 14429946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 357
Target Start/End: Complemental strand, 19194898 - 19194816
Alignment:
Q  275 cgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatca 357  Q
    |||||||||||||||||||| ||    |||| | |||||||||||||||||||||||  || ||| |||| |||| |||||||    
T  19194898 cgttaattttttaatgtataatatgtatgatgtgattttaaccacttgattgcaggttcattgtatctaatagtgcaccatca 19194816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 40811256 - 40811318
Alignment:
Q  223 tgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||||||||| || ||||| |||| || |||||| |||||||||||||| ||||| |||||    
T  40811256 tgtctcaatttgatcccataactcttttgccgtttattattttggtcatctccgttagttttt 40811318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 52743087 - 52742969
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||| |||||||||   ||| | |||||| | |||| ||||||||||||||| |||||| | ||  | || ||||||||||| || ||    
T  52743087 atcatttggtcccttagcttatttttcattttcactttggtcccctaactataaagtgtctcaaattggtcccttaggttttatgtcgtttactgttatg 52742988  T
Q  267 gtcatcttcgttaattttt 285  Q
    ||| ||| ||||| |||||    
T  52742987 gtcctctccgttagttttt 52742969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 2971715 - 2971780
Alignment:
Q  179 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||||||||||  ||||| | ||| || |||||| |||||||||||||||||||||| |||||    
T  2971715 cttaacttatttttttattttcactttagtcctctaactataaagtgtctcaatttggtcccataa 2971780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 21278275 - 21278214
Alignment:
Q  221 agtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatt 282  Q
    ||||| |||| |||||||||||| |||||| || ||||| ||||| ||||||| ||||||||    
T  21278275 agtgtttcaaattggtctcataactcttctatcatttaccattttagtcatctccgttaatt 21278214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 29264867 - 29264946
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||| |||||||||||| |||||||||||||| |||||| | |||| | |||||| |||||| ||||| |||||||||    
T  29264867 ggtttaatatatcatttggtc-cttaacttattttt-gattttcaatttgatcctctaactataaaatgtcttaatttggtc 29264946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 39193589 - 39193662
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    |||||||| ||||||||||||||  ||||||||||||| |  ||| | |||| |||||||||||| || |||||    
T  39193589 atttggtcccttaacttattttttaattttattttggtcccttaactttaaactgtctcaatttgatcccataa 39193662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 256
Target Start/End: Original strand, 48973215 - 48973292
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 256  Q
    |||||||||||||  ||||| ||||| || | |||| ||||||||||||||||||| || | ||  ||||||||||||    
T  48973215 cttaacttattttcggatttcattttagtcccctaactataaagtgtctcaatttgatcccttatgtcttctgtcgtt 48973292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 51725397 - 51725470
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaat 289  Q
    ||||||||||||||||||| ||  |||||  ||||| ||||||  ||||||||||| | |||| ||||||||||    
T  51725397 tataaagtgtctcaatttgatcctataaaatttctgccgtttatcattttggtcatgtccgtttattttttaat 51725470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 20171269 - 20171197
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    |||||||  |||||||||||||  ||||||||||||| |  ||| | |||| ||||||||||||||| |||||    
T  20171269 tttggtcctttaacttatttttgaattttattttggtcccttaactttaaactgtctcaatttggtcccataa 20171197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 27114692 - 27114764
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||| || |||||||||||  ||||||||||||| |  ||||| ||||  |||||||||||||| |||||    
T  27114692 tttggtccctcaacttatttttgaattttattttggtcccttaattttaaatcgtctcaatttggtcccataa 27114764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 28309771 - 28309843
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||| | ||||  ||||||||||||||||||||    
T  28309771 tttggtcccttaacttattttttaatttcattttggtcccttaactttaaaccgtctcaatttggtctcataa 28309843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 31859600 - 31859667
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 239  Q
    ||||||| |||||||||||||| ||||| ||||| | || |||| |||||||| ||| |||||||||||    
T  31859600 tttggtcacttaacttatttttggatttcatttt-gatccctaactataaagtatcttaatttggtctc 31859667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 33850311 - 33850347
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggt 207  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  33850311 tttggtcccttaacttatttttggattttattttggt 33850347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 33943667 - 33943631
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggt 207  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  33943667 tttggtcccttaacttatttttggattttattttggt 33943631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 328
Target Start/End: Complemental strand, 40110710 - 40110602
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccac 319  Q
    |||||| ||||||||||| ||||| |||||    ||||| || | ||||| |||  |||| ||||||||||||||  | | ||||||| ||||||||||     
T  40110710 aagtgtgtcaatttggtcccataagtcttcctctgtttattaatgtggtcctctctgttagttttttaatgtataaaattattgatatgattttaaccat 40110611  T
Q  320 ttgattgca 328  Q
    |||||||||    
T  40110610 ttgattgca 40110602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 47511376 - 47511448
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||| ||||||||||||||  |||| |||||| | |  ||||| |||| ||||||||||||||| |||||    
T  47511376 tttggtcccttaacttatttttgaatttcattttgatcccttaattttaaactgtctcaatttggtcccataa 47511448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 167 - 360
Target Start/End: Complemental strand, 36940144 - 36939951
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||| | | |||| |||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  36940144 atcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtttcaatttggtatcataaatcttctgccgtttactattttg 36940045  T
Q  267 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaaca 360  Q
    ||||||| ||||||||||||||| | || |||| |||||||  ||| ||||| | ||||||||||| || |||  ||| ||||||||| |||||    
T  36940044 gtcatctccgttaattttttaatatctaataattttgatatggtttcaaccattcgattgcaggtccattgtatataatagtgaaccaccaaca 36939951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 37274905 - 37275019
Alignment:
Q  180 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 279  Q
    ||||||||||||| ||||| |||||||| |||||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||||| ||| |||||    
T  37274905 ttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttgttcccataaatcttctgccgtttactattttggtcctctccgtta 37275004  T
Q  280 attttttaatgtata 294  Q
     ||||||||||||||    
T  37275005 gttttttaatgtata 37275019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 36756069 - 36756187
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |  ||| |||||||||| ||||| ||||| |||||||||| |||||||||||||||||    
T  36756069 atcatttggtcccttaacttatttttagtttttaatttggtcccataactataaagtgtttcaatctggtcacataaatcttatgtcgtttactattttg 36756168  T
Q  267 gtcatcttcgttaattttt 285  Q
    ||||||| ||||| |||||    
T  36756169 gtcatctccgttagttttt 36756187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 167 - 278
Target Start/End: Original strand, 38589826 - 38589936
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||||| |||||| ||||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  38589826 atcatttggtcccttaacttattttt-gttttcaatttggtcctctaactataaagtggctcaatttggtcccataaatcttatgtcgtttactattttg 38589924  T
Q  267 gtcatcttcgtt 278  Q
     |||||||||||    
T  38589925 atcatcttcgtt 38589936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 291
Target Start/End: Original strand, 24068339 - 24068459
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||| |||||   ||||||||| |||||||     
T  24068339 tttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatttggtcc 24068438  T
Q  271 tcttcgttaattttttaatgt 291  Q
    ||| ||||| |||||||||||    
T  24068439 tctccgttagttttttaatgt 24068459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 179 - 279
Target Start/End: Complemental strand, 31625483 - 31625383
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||| | ||| | |||||| | ||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| ||| ||||    
T  31625483 cttaacttatttttggttttcaatttggtcccctaattataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcctctccgtt 31625384  T
Q  279 a 279  Q
    |    
T  31625383 a 31625383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 167 - 269
Target Start/End: Complemental strand, 38591118 - 38591016
Alignment:
Q  167 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    ||||||||||| |||||||||||||| |||||| | |||||| | |||| |||||||||||||||||||||| |||||||||| || |||||||||||||    
T  38591118 atcatttggtcccttaacttattttt-gattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgccgtttactatttt 38591020  T
Q  266 ggtc 269  Q
    ||||    
T  38591019 ggtc 38591016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 269
Target Start/End: Original strand, 37472408 - 37472510
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||| |||  ||||||||||||| | ||||| |||||| |||||| |||||||||||||||||||||| ||||| |||| |||||||||| ||||||    
T  37472408 atcatttcgtcctttaacttatttttggtttttaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttttgtcgtttaccattttg 37472507  T
Q  267 gtc 269  Q
    |||    
T  37472508 gtc 37472510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 269
Target Start/End: Original strand, 43275755 - 43275857
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||||||||||||||||||||| | ||| | |||||||| |||| |||||||||||||||||| ||| ||||| |||| || |||||| |||||||    
T  43275755 atcatttggtctcttaacttattttttgttttcaatttggttccctaactataaagtgtctcaatttagtcccataactcttatgccgtttattattttg 43275854  T
Q  267 gtc 269  Q
    |||    
T  43275855 gtc 43275857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 167 - 263
Target Start/End: Original strand, 14820198 - 14820294
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatt 263  Q
    |||| |||||| |||||||||||||| ||||||| |||||| | |||| |||||||||||||||||| ||| |||||||||| ||||||||| ||||    
T  14820198 atcaattggtcccttaacttatttttggattttaatttggtcccctaactataaagtgtctcaatttagtcccataaatcttatgtcgtttattatt 14820294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 167 - 291
Target Start/End: Complemental strand, 29739754 - 29739630
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||||||||| |||||||| | ||| | |||| | | |||| |||||||||||||||||||||| ||||||| ||||  ||||||| ||||||    
T  29739754 atcatttggtctcttaatttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaattttcttccgtttaccattttg 29739655  T
Q  267 gtcatcttcgttaattttttaatgt 291  Q
    ||||| | ||||  |||||||||||    
T  29739654 gtcatgtccgtttgttttttaatgt 29739630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 31623911 - 31624023
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||| ||||||||||| |||||||||| ||||||||| ||||||     
T  31623911 atcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataaatcttatgtcgtttattatttta 31624010  T
Q  267 gtcatcttcgtta 279  Q
    ||| ||| |||||    
T  31624011 gtcctctccgtta 31624023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 16363930 - 16363811
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| ||| |||||||| |||||||||||||| | ||| | |||||| |||||| |||||||| |||||||||| || |||||||| ||||  ||||||    
T  16363930 ttaatatataatttggtcccttaacttatttttggttttcactttggtcctctaactataaagtatctcaatttgatcccataaatcgtctgctgtttac 16363831  T
Q  260 tattttggtcatcttcgtta 279  Q
    |||||||||| ||| |||||    
T  16363830 tattttggtcctctccgtta 16363811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 285
Target Start/End: Original strand, 35943916 - 35944031
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaag-tgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||| |||||||||||||| | ||| |||||||| |  ||||||||||  ||||||||||||||| |||||||||| ||  ||||||||||||||||    
T  35943916 tttggtcccttaacttatttttggttttcattttggtcccttaattataaaaatgtctcaatttggtcccataaatcttatgcagtttactattttggtc 35944015  T
Q  270 atcttcgttaattttt 285  Q
    |||| ||||| |||||    
T  35944016 atctccgttagttttt 35944031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 43278039 - 43277928
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| ||||||||| || ||||||||||||||   ||||| |||||| | |||| |||||| ||||||||||||||| | |||||||| || |||||||    
T  43278039 ttaatatatcatttgatcccttaacttattttttatttttaatttggtcccctaactataaaatgtctcaatttggtcccgtaaatcttatgccgtttac 43277940  T
Q  260 tattttggtcat 271  Q
    ||||||||||||    
T  43277939 tattttggtcat 43277928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 117065 - 117171
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||| | ||| |||||||| | ||||||||||| ||| |||||||| || |||||||||||||||||||| | |||||||| ||| ||||    
T  117065 cttaacttatttttggttttcattttggtcccctaattataaaatgtttcaatttgatcccataaatcttctgtcgtttattgttttggtcctctccgtt 117164  T
Q  279 aattttt 285  Q
    | |||||    
T  117165 agttttt 117171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 167 - 269
Target Start/End: Original strand, 36070183 - 36070285
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||| || ||||| |||||||| | ||| | |||||| | |||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||    
T  36070183 atcatttgatcccttaatttatttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttctgccgtttactattttg 36070282  T
Q  267 gtc 269  Q
    |||    
T  36070283 gtc 36070285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 20308663 - 20308728
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| | | |||||||||    
T  20308663 aagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccattaattttt 20308728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 21095296 - 21095361
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| | | |||||||||    
T  21095296 aagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccattaattttt 21095361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 279
Target Start/End: Complemental strand, 41868044 - 41867915
Alignment:
Q  150 aataattggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 249  Q
    ||||||||| |||||  ||||||||||| ||||| |||||||||| ||| | |||||| | |||| |||||||||||||||||||||| ||||||| ||     
T  41868044 aataattggcttaatacatcatttggtcccttaatttatttttagttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatttta 41867945  T
Q  250 tgtcgtttactattttggtcatcttcgtta 279  Q
    || |||||  |||||| ||| ||| |||||    
T  41867944 tgccgttttttattttagtcctctccgtta 41867915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 279
Target Start/End: Complemental strand, 45385901 - 45385793
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||| ||||| |||||||| |  |||||||||||||| |||||||| ||  ||||||||| |||||||||| ||||| |||     
T  45385901 tttggtcccttaacttatttttggatttcattttggtcccataattataaagtgtttcaatttgatcctataaatcttatgtcgtttaccattttagtcc 45385802  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  45385801 tctccgtta 45385793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 150 - 277
Target Start/End: Complemental strand, 7796935 - 7796809
Alignment:
Q  150 aataattggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 249  Q
    |||||| | |||||| |||  ||||||  ||||||||||||||   |||||||||| |  |||||||||||||||||||||||||||||||||| |||||    
T  7796935 aataatagatttaatatatgctttggttccttaacttattttttatttttattttgatcatctaattataaagtgtctcaatttggtctcataactcttc 7796836  T
Q  250 tgtcgtttactattttggtcatcttcgt 277  Q
    || || |||  ||||||||||| |||||    
T  7796835 tgccg-ttatcattttggtcattttcgt 7796809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 273
Target Start/End: Complemental strand, 4810234 - 4810129
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||| ||| |||||||||||||| | ||||| |||||| || |||||||||| |||||||||||  |  |||||||||| |||| ||||||||||||    
T  4810234 atcatttcgtcccttaacttatttttggtttttaatttggtcct-taattataaaatgtctcaatttaattccataaatcttatgtcatttactattttg 4810136  T
Q  267 gtcatct 273  Q
    |||||||    
T  4810135 gtcatct 4810129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 283
Target Start/End: Original strand, 6843772 - 6843878
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgt-tta-ctattttggtcatcttcg 276  Q
    |||||||||||||  |||||||||||||| | |||| |||||||||||||||||||||| | || |||||||||||| ||| || |||||||||||| |     
T  6843772 cttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccctatatcttctgtcgtgttacctcttttggtcatctcca 6843871  T
Q  277 ttaattt 283  Q
    |||||||    
T  6843872 ttaattt 6843878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 285
Target Start/End: Original strand, 19913501 - 19913615
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| ||||||||||||||  |||| | |||||| |||||| |||||||||| ||||||||||| ||||| |||||||  |||||  |||||||||     
T  19913501 tttggtcccttaacttatttttgaatttcaatttggtcctctaactataaagtgtttcaatttggtcccataagtcttctgcggtttatcattttggtcc 19913600  T
Q  271 tcttcgttaattttt 285  Q
    ||| ||||| |||||    
T  19913601 tctccgttagttttt 19913615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 24069553 - 24069455
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||| |||||||||||||| | ||| |||||| | |  ||| |||||||||||||||||||||| ||||| ||||||| ||||||| |||||||||    
T  24069553 tttggtcccttaacttatttttggttttcattttgatcccttaactataaagtgtctcaatttggtcccataactcttctgccgtttaccattttggtc 24069455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 335
Target Start/End: Original strand, 34616183 - 34616307
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttct-----gtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcat 310  Q
    |||||||||||||||||||||| |||||||||| |     ||||||||| ||||||||||| | ||||| ||||||||||| || || | || |||| ||    
T  34616183 tataaagtgtctcaatttggtcccataaatcttttcttttgtcgtttaccattttggtcatttccgttagttttttaatgtttaatatttttaatatgat 34616282  T
Q  311 tttaaccacttgattgcaggtctat 335  Q
    || ||||| | ||||||||||||||    
T  34616283 ttcaaccattcgattgcaggtctat 34616307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 285
Target Start/End: Original strand, 37994 - 38108
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||| | ||| ||||| || | |||| |||||||||| | ||||||||||||||| |||||   ||||||||||| |||||     
T  37994 tttggtcccttaacttattttttgttttaattttagtcccctaactataaagtgtttgaatttggtctcataagtcttcctccgtttactattgtggtcc 38093  T
Q  271 tcttcgttaattttt 285  Q
    ||| ||||| |||||    
T  38094 tctccgttagttttt 38108  T

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Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 7816187 - 7816090
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgt 277  Q
    ||||||||||||||   |||||||||| |  ||||| |||||||||||||||||||||||||||| ||||||| || |||  ||||||||||| |||||    
T  7816187 cttaacttattttttatttttattttgatcatctaactataaagtgtctcaatttggtctcataattcttctgccg-ttatcattttggtcattttcgt 7816090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 332
Target Start/End: Complemental strand, 35945545 - 35945383
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||| |||||||||||||| | ||| ||||| || |  ||| |||||| ||||||| ||||||| |||| ||||||||  ||||||||||||||||    
T  35945545 atttggtcccttaacttattttttgttttcattttagtcccttaactataaaatgtctcactttggtcccatatatcttctgcagtttactattttggtc 35945446  T
Q  270 atcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 332  Q
      ||   ||| ||||||||||| || || | ||||| | |||| ||||| | |||||||||||    
T  35945445 ccctggattagttttttaatgtttaatatttttgatgtgatttcaaccattcgattgcaggtc 35945383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 37324787 - 37324681
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||| | ||||| |||||| | |||| |||||| |||||||||||||||||| ||||||||   | |||||||||||| |  ||| ||||    
T  37324787 cttaacttatttttggtttttaatttggtcccctaactataaaatgtctcaatttggtctcaaaaatcttcgaccatttactattttgtttctctccgtt 37324688  T
Q  279 aattttt 285  Q
    |||||||    
T  37324687 aattttt 37324681  T

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Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 39546776 - 39546670
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||  | ||| | |||||||| |||| | |||||||||||||||||||| ||||||| || || |||||||  |||||||||||| ||||    
T  39546776 cttaacttattttctgttttcactttggttccctaactttaaagtgtctcaatttggtcccataaatattatgccgtttaccgttttggtcatctccgtt 39546677  T
Q  279 aattttt 285  Q
    | |||||    
T  39546676 agttttt 39546670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 13367112 - 13367043
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||||||| | ||||||||| ||||||||||||| ||||||||||||||||| ||| ||||| |||||    
T  13367112 tataaagtgttttaatttggtcccataaatcttctgccgtttactattttggtcctctccgttagttttt 13367043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 332
Target Start/End: Complemental strand, 19915013 - 19914852
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    |||||||  ||||||||||||  | ||| | |||||| |  ||| |||||||||||||||||||  | ||||||||||||  ||||||| ||||||||||    
T  19915013 tttggtcctttaacttattttgggttttcaatttggtcccttaactataaagtgtctcaatttgtacccataaatcttctaccgtttaccattttggtca 19914914  T
Q  271 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 332  Q
    | | ||||  ||| ||||||| || || | ||||||| ||| | |||| |||||||||||||    
T  19914913 tatccgtttgtttattaatgtctaatatttttgatattattgtgaccatttgattgcaggtc 19914852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 3237427 - 3237526
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||| ||||| |||| ||| | |||| | |||| ||||||||||||||| ||||||| ||||| ||||||| |||||| |||    
T  3237427 tttggtcccttaacttatttttggatttcattt-ggtcccctaactttaaactgtctcaatttggtcccataaatattctgccgtttacaattttgatca 3237525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 39515208 - 39515308
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||| | ||| |||||| | | || | |||||||||||||||||||||||||||| |||| || | |||||  |||||||||    
T  39515208 tttggtcccttaacttatttttggttttcattttgatcccctgactataaagtgtctcaatttggtctcataactcttttgccatttacctttttggtca 39515307  T
Q  271 t 271  Q
    |    
T  39515308 t 39515308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 1570268 - 1570205
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 279  Q
    |||||||||||||||||||||||  ||||| || || ||||||||||||||||||||| |||||    
T  1570268 tataaagtgtctcaatttggtctattaaattttatgccgtttactattttggtcatctccgtta 1570205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 27750687 - 27750620
Alignment:
Q  212 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 279  Q
    |||||||||||| ||||||||||||| |||||||||| | | |||||||||||||||| ||| |||||    
T  27750687 taattataaagtatctcaatttggtcccataaatcttatattgtttactattttggtcttctccgtta 27750620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 262
Target Start/End: Original strand, 37323353 - 37323447
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactat 262  Q
    ||||||||||| ||||| |||||||| | ||| | |||||||| |||| |||||| |||||||||||| || ||||||||||| | ||||||||||    
T  37323353 atcatttggtcccttaatttatttttggttttcaatttggttccctaactataaaatgtctcaatttgatcccataaatcttc-ggcgtttactat 37323447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 6844680 - 6844614
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||  ||||| |||||||||| ||||  |||||||||||||||||||||    
T  6844680 tttggtcccttaacttattttcggatttcattttggttccctaacaataaagtgtctcaatttggtc 6844614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 21267173 - 21267239
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||| | ||| | |||||| |||||| ||||||||||||||||||||||    
T  21267173 tttggtcgcttaacttatttttggttttcactttggtcctctaactataaagtgtctcaatttggtc 21267239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 36938750 - 36938804
Alignment:
Q  231 tttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    ||||||||||||||||||||| ||||||||||||||||| |||  ||||||||||    
T  36938750 tttggtctcataaatcttctgccgtttactattttggtcttctctgttaattttt 36938804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 8395022 - 8395069
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggt 207  Q
    ||||| ||||||||||||||||||||||||||| | ||||||||||||    
T  8395022 ttaatatatcatttggtctcttaacttatttttggtttttattttggt 8395069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 10052097 - 10052179
Alignment:
Q  155 ttggtttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||| ||||| |||||||||||| ||||||||||| || |||||| | |||||| | |||||||||||||||||||| ||||||    
T  10052097 ttggcttaatatatcatttggtcccttaacttattctt-gattttcactttggtcccctaattataaagtgtctcaaattggtc 10052179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 29738300 - 29738407
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| ||||||||||||||   ||| | ||||||    ||| |||||||||||||||||| ||||||||| ||||||| |||||||  ||||||||     
T  29738300 tttggtcccttaacttattttttattttcaatttggtctattaactataaagtgtctcaatttagtctcataagtcttctgccgtttacctttttggtcc 29738399  T
Q  271 tcttcgtt 278  Q
    ||| ||||    
T  29738400 tctccgtt 29738407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 269
Target Start/End: Complemental strand, 37276354 - 37276252
Alignment:
Q  167 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    ||||||||||| ||||| |||||||| |||||| | |||| | |  ||| |||||||||||||||||||||| |||||||||| || |||||| ||| ||    
T  37276354 atcatttggtcccttaatttattttt-gattttcactttgatcccttaactataaagtgtctcaatttggtcccataaatcttttgccgtttattatatt 37276256  T
Q  266 ggtc 269  Q
    ||||    
T  37276255 ggtc 37276252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 43386813 - 43386730
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttct 250  Q
    ||||| ||||| |||||||||||||| | ||| | |||||| | |||| |||||| ||||||||||||||| ||||| ||||||    
T  43386813 atcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataactcttct 43386730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 2421351 - 2421286
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||| ||||||||||| || |||||||||| |||||| |||||||||| |||| |||| |||||    
T  2421351 aagtgtttcaatttggtcccagaaatcttctgccgtttattattttggtcctctttgttagttttt 2421286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 7486131 - 7486200
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||||||  ||||||||||| |||||||||| ||  |||||||||||||||| ||| ||||| |||||    
T  7486131 tataaagtgcttcaatttggtcccataaatcttttgctgtttactattttggtcctctccgttagttttt 7486200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 8095404 - 8095453
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||||||||||||| ||| | |||| ||||||||||||||||||||    
T  8095404 aagtgtctcaatttggtcccattactcttttgtcgtttactattttggtc 8095453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 273
Target Start/End: Original strand, 41866901 - 41867005
Alignment:
Q  169 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 267  Q
    ||||||||| |||||||||||||| |||||| | |||| | |  ||| |||||||||| ||||||||||| ||||||| ||  | | |||||||||||||    
T  41866901 catttggtcccttaacttattttt-gattttcactttgatcccttaactataaagtgtttcaatttggtcccataaattttacgccatttactattttgg 41866999  T
Q  268 tcatct 273  Q
    ||||||    
T  41867000 tcatct 41867005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 331
Target Start/End: Complemental strand, 10053855 - 10053691
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||| ||| |||||||||||||| | ||| | |||||| |  ||| ||||||||||||||| |||||| | ||  |||| |||||||  || |||||    
T  10053855 atcatttagtcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaagttggtcccttatgtcttatgtcgttacctcttttg 10053756  T
Q  267 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggt 331  Q
    ||  ||| |||||||||||| |  |||| || | || |||| ||| |||||  ||||||||||||    
T  10053755 gttctctccgttaatttttttaattataatatttttaatatgattataaccgtttgattgcaggt 10053691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 357
Target Start/End: Original strand, 31844518 - 31844566
Alignment:
Q  309 attttaaccacttgattgcaggtctatggtaactaagagtgaaccatca 357  Q
    |||||||||||||||||||| |||||| |||| ||| ||||||||||||    
T  31844518 attttaaccacttgattgcatgtctattgtaattaacagtgaaccatca 31844566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 4675750 - 4675833
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||| ||| |||||||  ||||||||||||||  ||||||||||||| |  ||| | |||| ||||||||||||||| |||||    
T  4675750 ttaatatatgatttggttccttaacttatttttgaattttattttggtcccttaactttaaattgtctcaatttggtcccataa 4675833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 268
Target Start/End: Original strand, 4807361 - 4807472
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 256  Q
    ||||||||  |||||| ||||  |||||||||||||   ||||| |||||| | |||| ||||| || | ||||||||||| ||||||||||  | ||||    
T  4807361 ggtttaatacatcattcggtcctttaacttatttttgatttttaatttggtcccctaactataacgtttttcaatttggtcccataaatcttacgccgtt 4807460  T
Q  257 tactattttggt 268  Q
    || |||||||||    
T  4807461 tattattttggt 4807472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 2075488 - 2075570
Alignment:
Q  275 cgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatca 357  Q
    |||||||||||||||||||| ||    |||| | |||||||||||||||||||||||  || ||| |||| |||| |||||||    
T  2075488 cgttaattttttaatgtataatatgtatgatgtgattttaaccacttgattgcaggttcattgtatctaatagtgcaccatca 2075570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 7770996 - 7770899
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgt 277  Q
    ||||||||||||||   ||| |||||| |  ||||| |||||||||| ||||||||||||||||| |||| || || |||  ||||||||||| |||||    
T  7770996 cttaacttattttttattttcattttgatcatctaactataaagtgtttcaatttggtctcataactcttatgccg-ttatcattttggtcattttcgt 7770899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 7815060 - 7815117
Alignment:
Q  179 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggt 236  Q
    ||||| |||||||| |||||| |||||||| ||||||||||||| ||||||||||||||    
T  7815060 cttaaattattttt-gattttcattttggtcctctaattataaaatgtctcaatttggt 7815117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 13360362 - 13360428
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||||||||| ||||| || | ||||||| |||  ||||||| ||||||    
T  13360362 tttggtcccttaacttatttttagatttcattttcgtcccctaattaaaaaacgtctcaaattggtc 13360428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 29441625 - 29441687
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 233  Q
    ||||||||||||||||||||||  ||||||||||||| |  ||| | |||| |||||||||||    
T  29441625 tttggtctcttaacttatttttgaattttattttggtcccttaactttaaactgtctcaattt 29441687  T

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Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 36757310 - 36757260
Alignment:
Q  198 ttattttggttctctaattataaagtgtctcaatttggtctcataaatctt 248  Q
    |||||||||| | |||| ||||||  |||||||||||||||||||||||||    
T  36757310 ttattttggtcccctaactataaaacgtctcaatttggtctcataaatctt 36757260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 45194500 - 45194606
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    ||||| ||||||| |  ||||| |||||| || ||| ||| |||||| | ||||| || | ||||||||| || |||||||||||||| |||||| | ||    
T  45194500 cttaatttattttaattttttagtttggtcctttaactattaagtgttttaatttagtgttataaatcttttgccgtttactattttgatcatctccatt 45194599  T
Q  279 aattttt 285  Q
    |||||||    
T  45194600 aattttt 45194606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 3612690 - 3612618
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggt-tctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||| ||||||||||||||  ||||||||||||| ||| ||| | |||| ||||||||||||||| |||||    
T  3612690 tttggtcccttaacttatttttgaattttattttggtctct-taactttaaattgtctcaatttggtcccataa 3612618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 42793816 - 42793901
Alignment:
Q  276 gttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacac 361  Q
    |||||||||||||||| ||  | | ||||||| |||||||||| | ||||||| ||| || |||| ||| ||||||||||| ||||    
T  42793816 gttaattttttaatgtctaaaacttttgatatgattttaaccattggattgcatgtccattgtaattaatagtgaaccatcgacac 42793901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 325
Target Start/End: Complemental strand, 45195866 - 45195757
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaa 315  Q
    |||||||||||||||||| |||   || |||||||| ||||  ||||||||||||||   ||||||||||| |||| || || | || |||| ||| |||    
T  45195866 tataaagtgtctcaatttagtccattatatcttctgccgttatctattttggtcatcacagttaattttttgatgtttaatatttttaatataattataa 45195767  T
Q  316 ccacttgatt 325  Q
    || |||||||    
T  45195766 ccgcttgatt 45195757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 15989013 - 15989085
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||| ||||||||||||||| |||| |||||||| |  ||| | ||||  |||||||||||||| |||||    
T  15989013 tttggtcccttaacttatttttaaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 15989085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 31871462 - 31871502
Alignment:
Q  229 aatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||||| ||| |||||||||||||||| ||||||||||    
T  31871462 aatttggtcccatgaatcttctgtcgtttattattttggtc 31871502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 329
Target Start/End: Complemental strand, 37474161 - 37473985
Alignment:
Q  153 aattggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgt 252  Q
    |||||| |||||  |||||||  || |||||||||||| | | ||| | |||||| |  ||| ||||||||||||||||||||||    |||||||||      
T  37474161 aattggcttaatacatcatttcatcccttaacttatttatggttttcaatttggtcccttaactataaagtgtctcaatttggtcctggaaatcttcttc 37474062  T
Q  253 cgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcag 329  Q
    ||||||  || |||||| | | |||| |||||||||||| || || | |||||||  |||| |||| | ||||||||    
T  37474061 cgtttatcatcttggtcctgtccgtttattttttaatgtctaatatttttgatattgttttgaccattcgattgcag 37473985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 5e-35; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 33376223 - 33376342
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||||||||||||||||||||| | ||| | ||| || | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  33376223 atcatttggtctcttaacttatttttggttttcaatttagtgccctaattataaagtgtctcaatttggtcccataaatcttctgtcgtttactatttta 33376322  T
Q  267 gtcatcttcgttaatttttt 286  Q
    ||| ||| ||||||||||||    
T  33376323 gtcctctccgttaatttttt 33376342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 167 - 328
Target Start/End: Original strand, 31711097 - 31711258
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| ||||| |||||||| || ||| |||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  31711097 atcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttggtctcataagtcttatgtcgtttaccattttg 31711196  T
Q  267 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgca 328  Q
     || | | ||||  ||||||||||| || || | |||||||  ||| ||||| | |||||||    
T  31711197 atcctttccgtttgttttttaatgtttactatttttgatattgtttcaaccattcgattgca 31711258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 156 - 279
Target Start/End: Complemental strand, 1273554 - 1273432
Alignment:
Q  156 tggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgt 255  Q
    ||||||||| |||||||||||| |||||||||||||| | ||||| |||||| | |||| |||||||||||||||||||||| ||||| |||| ||||||    
T  1273554 tggtttaatatatcatttggtcccttaacttatttttgg-ttttaatttggtcccctaactataaagtgtctcaatttggtcccataagtcttatgtcgt 1273456  T
Q  256 ttactattttggtcatcttcgtta 279  Q
    || ||||||||||| ||| |||||    
T  1273455 ttgctattttggtcctctccgtta 1273432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 171 - 285
Target Start/End: Complemental strand, 15446777 - 15446663
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||| ||||| ||||||||  |||||||||||||||| ||||||||||| ||||||| ||||  |||||||||||||||||     
T  15446777 tttggtcccttaacttatttttggatttcattttggtcatctaattataaagtgtttcaatttggtcccataaattttctaccgtttactattttggtcc 15446678  T
Q  271 tcttcgttaattttt 285  Q
    ||| ||||| |||||    
T  15446677 tctccgttagttttt 15446663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 171 - 353
Target Start/End: Complemental strand, 46796133 - 46795951
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||| |||||   ||||||||||| |||||     
T  46796133 tttggtcccttaacttatttttggttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactattgtggtcc 46796034  T
Q  271 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaacc 353  Q
    ||| ||||| ||||||||||| ||    | ||||||| |||||||||| ||||||||| ||| || |||  ||| ||||||||    
T  46796033 tctccgttagttttttaatgtctaaattttttgatatgattttaaccatttgattgcatgtccattgtatttaatagtgaacc 46795951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 152 - 285
Target Start/End: Complemental strand, 11115106 - 11114973
Alignment:
Q  152 taattggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctg 251  Q
    ||||||| |||||  ||||||||||| ||||||||||||| || ||| |||||||| | |||| |||||||| ||||||||||||| ||||| |||||||    
T  11115106 taattggcttaatacatcatttggtcccttaacttattttcagttttcattttggtcccctaactataaagtatctcaatttggtcccataactcttctg 11115007  T
Q  252 tcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||||| ||||||| | ||| ||||| |||||    
T  11115006 tcgtttaccattttggacctctccgttagttttt 11114973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 33377475 - 33377363
Alignment:
Q  167 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    ||||||||||| |||||||||||||| |||||| | |||||| | |||| |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  33377475 atcatttggtcccttaacttattttt-gattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactatttt 33377377  T
Q  266 ggtcatcttcgtta 279  Q
    |||| ||| |||||    
T  33377376 ggtcctctccgtta 33377363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 160 - 332
Target Start/End: Complemental strand, 21104428 - 21104256
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| |||||||||||  ||||| |||||||| | ||| |||||||| | |||| |||||||||||||||||||||||||||  |||||||||||||||    
T  21104428 ttaatatatcatttggttccttaaattattttttgttttcattttggtcccctaactataaagtgtctcaatttggtctcatatgtcttctgtcgtttac 21104329  T
Q  260 tattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 332  Q
     ||||||||| | | ||||   |||||||||| || || | |||||||  ||| ||||| | |||||||||||    
T  21104328 cattttggtcctttccgtttgctttttaatgtttactatttttgatattgtttcaaccattcgattgcaggtc 21104256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 157 - 363
Target Start/End: Original strand, 38553924 - 38554130
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 256  Q
    ||||||||  ||||||||||| ||||| |||||||  | ||||||||||||  ||||| |||||||||||||||||||||||||||| |||||   ||||    
T  38553924 ggtttaatacatcatttggtcccttaatttattttctgtttttattttggtcttctaactataaagtgtctcaatttggtctcataagtcttcctccgtt 38554023  T
Q  257 tactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatc 356  Q
    ||||| | | ||||||| | ||| ||||||||||| ||    | ||||||| |||||||||| ||||| ||| ||| || |||  ||| |||||||| ||    
T  38554024 tactaatgtagtcatctccattagttttttaatgtctaaattttttgatatgattttaaccatttgatcgcacgtccattgtatttaatagtgaaccgtc 38554123  T
Q  357 aacactt 363  Q
    | |||||    
T  38554124 atcactt 38554130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 171 - 353
Target Start/End: Original strand, 47667188 - 47667369
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    |||||||  ||||||||||||| | |||||||||||| |||||| |||||||||||||||||||||||||||| |||||   ||||||||| | |||||     
T  47667188 tttggtcctttaacttatttttggtttttattttggt-ctctaactataaagtgtctcaatttggtctcataagtcttcctccgtttactaatatggtcc 47667286  T
Q  271 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaacc 353  Q
    ||| ||||| ||||||||||| ||    | || || | |||||||||| ||||||||| ||| || ||| |||| ||||||||    
T  47667287 tctgcgttagttttttaatgtctaaatttttttatgtgattttaaccatttgattgcatgtccattgtatctaatagtgaacc 47667369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 167 - 328
Target Start/End: Complemental strand, 28103597 - 28103436
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| ||||| |||||||| |  ||| |||||||||||||||||||||| |||||  |||||| ||||||| ||||||    
T  28103597 atcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataagacttctgccgtttaccattttg 28103498  T
Q  267 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgca 328  Q
    ||| | | ||||  ||||||||||| || || | |||||||  ||| ||||| | |||||||    
T  28103497 gtcctttccgtttgttttttaatgtttactatttttgatattgtttcaaccattcgattgca 28103436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 155 - 267
Target Start/End: Complemental strand, 26393250 - 26393138
Alignment:
Q  155 ttggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcg 254  Q
    ||||||||||  || |||||||| ||||||||||||||   |||||||||| | || ||| |||||||||||||||||||||| ||||| ||||||||||    
T  26393250 ttggtttaatacatgatttggtcccttaacttattttttatttttattttgatcctttaactataaagtgtctcaatttggtcccataactcttctgtcg 26393151  T
Q  255 tttactattttgg 267  Q
    ||||| |||||||    
T  26393150 tttaccattttgg 26393138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 27408768 - 27408871
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| ||||||||||||| || ||| | ||||||  ||||| |||||||||||||||||||||| ||||||||||||  ||||||| ||||||    
T  27408768 atcatttggtcccttaacttattttcagttttcaatttggtcatctaactataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttg 27408867  T
Q  267 gtca 270  Q
    ||||    
T  27408868 gtca 27408871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 170 - 285
Target Start/End: Original strand, 35787804 - 35787919
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||||| |||||||||||| | ||| | |||||| |||||| |||||| ||| ||||||||||| |||||||||||||||||||||  ||||||||    
T  35787804 atttggtctcataacttatttttggttttcactttggtcctctaactataaaatgtttcaatttggtcccataaatcttctgtcgtttaccgttttggtc 35787903  T
Q  270 atcttcgttaattttt 285  Q
     ||| ||||| |||||    
T  35787904 ctctccgttagttttt 35787919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 40146734 - 40146615
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||| ||||||| | |||||||||||| || ||| |||||||||||||||||||||| ||||| ||||||  || |||||| | ||    
T  40146734 atcatttggtcccttaacgtatttttggtttttattttggtcctttaactataaagtgtctcaatttggtcccataagtcttcttccgattactaatgtg 40146635  T
Q  267 gtcatcttcgttaatttttt 286  Q
    ||||||| ||||| ||||||    
T  40146634 gtcatctccgttagtttttt 40146615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 86808 - 86926
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||| ||||||||| |||||||||| ||| | |||||||| |||| |||||||  ||||||||||||| ||||||| ||||| |||||||| |||||    
T  86808 atcatttagtctcttaatttatttttagttttcactttggttccctaactataaagcatctcaatttggtcccataaatattctgccgtttactgttttg 86907  T
Q  267 gtcatcttcgttaattttt 285  Q
    ||| ||| ||||| |||||    
T  86908 gtcttctccgttagttttt 86926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 11113747 - 11113865
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||  | ||| ||||| || |  ||| |||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  11113747 atcatttggtcacttaacttattttcggttttcattttagtcccttaactataaagtgtctcaatttggtctcataactcttctgccgtttaccattttg 11113846  T
Q  267 gtcatcttcgttaattttt 285  Q
    ||||| | ||||| |||||    
T  11113847 gtcatttccgttagttttt 11113865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 171 - 285
Target Start/End: Original strand, 38370291 - 38370405
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| ||||||||||||||   ||| | ||||||  |||||  ||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||    
T  38370291 tttggtcccttaacttatttttcattttcaatttggtcatctaacgataaagtgtatcaatttggtctcataactcttctgtcgtttaccattttggtca 38370390  T
Q  271 tcttcgttaattttt 285  Q
    ||| ||||| |||||    
T  38370391 tctccgttagttttt 38370405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 180 - 289
Target Start/End: Complemental strand, 44305077 - 44304968
Alignment:
Q  180 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 279  Q
    ||||||||||||| | ||| | |||||| | |||| || |||||||||||||||||||  |||||||||| |  |||||||||||||||||||| |||||    
T  44305077 ttaacttattttttgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttccgctgtttactattttggtcatctccgtta 44304978  T
Q  280 attttttaat 289  Q
    ||||||||||    
T  44304977 attttttaat 44304968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 167 - 287
Target Start/End: Complemental strand, 10403527 - 10403408
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||| |||||||||||||||||| | ||| | |||| || ||||| |||||||||| ||||||||||||||||||||||| |||||||| ||||| |    
T  10403527 atcatttagtctcttaacttatttttggttttcactttgatt-tctaactataaagtgtatcaatttggtctcataaatcttcagtcgtttattatttcg 10403429  T
Q  267 gtcatcttcgttaatttttta 287  Q
    ||| |||  |||||| |||||    
T  10403428 gtcctctcggttaatatttta 10403408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 37560410 - 37560298
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| ||||||||||  | |||||||||| |||    
T  37560410 atcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttacgacgtttactatcttg 37560311  T
Q  267 gtcatcttcgtta 279  Q
    ||| ||| |||||    
T  37560310 gtcctctccgtta 37560298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 53400202 - 53400302
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||||||||| |||||||| |  ||| ||||||||||||||||||||||  ||||||||| |||||||||| ||||| ||| ||| ||||    
T  53400202 cttaacttatttttagatttcattttggtcccataactataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctctccgtt 53400301  T
Q  279 a 279  Q
    |    
T  53400302 a 53400302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 188 - 279
Target Start/End: Complemental strand, 5688727 - 5688636
Alignment:
Q  188 tttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 279  Q
    ||||||| ||| | |||||| | |||| |||||||||||||||||||||  |||||||||| |||||||||||||||||||||||| |||||    
T  5688727 tttttagttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttatgtcgtttactattttggtcatctccgtta 5688636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 294
Target Start/End: Complemental strand, 34439722 - 34439644
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtata 294  Q
    |||||| ||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||| |||||||||    
T  34439722 tataaaatgtttcaatttggtcccataaatcttctgccgtttactattttggtcatctccgttagttttctaatgtata 34439644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 30682728 - 30682813
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgt 255  Q
    |||||||| |||||||||||||||| ||| |||||||| |  ||| |||||||||||| |||||||||| ||||||||||||||||    
T  30682728 atttggtcccttaacttatttttagttttcattttggtcccttaactataaagtgtcttaatttggtcttataaatcttctgtcgt 30682813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 181 - 269
Target Start/End: Original strand, 10403298 - 10403386
Alignment:
Q  181 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||||||| | ||||| |||||| | |||| |||||||||||| ||||||||||| ||||||||  |||||||||||||||||||    
T  10403298 taacttatttttggtttttactttggtcccctaactataaagtgtcttaatttggtctcgtaaatcttacgtcgtttactattttggtc 10403386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 15445445 - 15445513
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 239  Q
    ||||||| |||||||||||||| ||||| |||||||| | |||||||||||||||||||||||||||||    
T  15445445 tttggtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctcaatttggtctc 15445513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 15787601 - 15787489
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    ||||| |||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||| | || || ||||||| ||||||||| ||| | ||    
T  15787601 cttaatttattttttgttttcattttggtcccctaactataaagtgtctcaatttggtcccataacttttttgccgtttaccattttggtcctctccatt 15787502  T
Q  279 aattttttaatgt 291  Q
    |||||||||||||    
T  15787501 aattttttaatgt 15787489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 5687229 - 5687292
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 279  Q
    |||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| |||||    
T  5687229 tataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcatctccgtta 5687292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 279
Target Start/End: Original strand, 26788540 - 26788639
Alignment:
Q  180 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 279  Q
    ||||||||||||||| ||| | |||||| || ||| |||||| | ||||||||| ||| ||||||||||||| ||||||||||||||||| ||| |||||    
T  26788540 ttaacttatttttagttttcactttggtcctataagtataaaatatctcaatttcgtcccataaatcttctgccgtttactattttggtcctctccgtta 26788639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 170 - 249
Target Start/End: Original strand, 40143662 - 40143741
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 249  Q
    ||||||||||||||||||||||||| ||| ||||| || | |||| ||||||||||||||||||| |||||||| |||||    
T  40143662 atttggtctcttaacttatttttagttttcattttagtcccctaactataaagtgtctcaatttgctctcataactcttc 40143741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 334
Target Start/End: Original strand, 6139047 - 6139169
Alignment:
Q  212 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcatt 311  Q
    ||||||| || ||||||||||||||||||||| |||| ||| ||||| ||||||||||||||  |||| | ||||||||| || || | || |||| |||    
T  6139047 taattattaaatgtctcaatttggtctcataactcttatgttgtttattattttggtcatctctgttagtattttaatgtctaatattttttatataatt 6139146  T
Q  312 ttaaccacttgattgcaggtcta 334  Q
    | ||||  |||||||||||||||    
T  6139147 tcaaccgtttgattgcaggtcta 6139169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 26791531 - 26791466
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||||||||||||||||| ||||||||||| | || |||||||||||||||||||||||||||    
T  26791531 tttggtctcttaacttatttttggattttattttag-tccctaattataaagtgtctcaatttggtc 26791466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 29833381 - 29833489
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||  ||||| |||||||| | ||||||||||| ||||||||||||||| | || ||||| |||||||  || ||||||||     
T  29833381 tttggtcccttaacttattttcggatttcattttggtcccctaattataaaatgtctcaatttggtcccttatatcttttgtcgttacctcttttggtcc 29833480  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  29833481 tctccgtta 29833489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 34438460 - 34438512
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 268  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  34438460 tataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggt 34438512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 37559003 - 37559115
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||  |||||||||||||| | ||| | |||||| | |||| |||||| ||||||||||||||| |||||| |||    ||||||||||||||    
T  37559003 atcatttggttccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaaccttacaccgtttactattttg 37559102  T
Q  267 gtcatcttcgtta 279  Q
    ||||||| |||||    
T  37559103 gtcatctccgtta 37559115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 171 - 286
Target Start/End: Original strand, 48206169 - 48206284
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    |||| ||| |||| |||||||| | ||||||||||||||  |||||||||||||| |||||||| ||  |||| | ||||  ||||||||||||||||||    
T  48206169 tttgatcttttaatttatttttggtttttattttggttccttaattataaagtgtttcaatttgatcctataacttttctaccgtttactattttggtca 48206268  T
Q  271 tcttcgttaatttttt 286  Q
    | | ||||| ||||||    
T  48206269 tttacgttagtttttt 48206284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 166 - 269
Target Start/End: Original strand, 55952830 - 55952932
Alignment:
Q  166 tatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    |||||||||||| ||||| ||||||||   ||||| ||| || | |||| |||||||||| ||||||||||||||||| |||| ||||||||| ||||||    
T  55952830 tatcatttggtc-cttaatttatttttgatttttaatttagtcccctaactataaagtgtttcaatttggtctcataactcttatgtcgtttattatttt 55952928  T
Q  266 ggtc 269  Q
    ||||    
T  55952929 ggtc 55952932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 3217708 - 3217618
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||||||||||  |||| | |||||| || ||| | |||||||| | |||||| ||||||||||||||||| ||||||||||||||||    
T  3217708 cttaacttatttttgaatttcactttggtcctttaactttaaagtgttttaatttgatctcataaatcttctgttgtttactattttggtc 3217618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 19049979 - 19049913
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||| ||||| |||||| | | |||||||||||||||||||||||||||    
T  19049979 tttggtcccttaacttatttttggatttcattttgatcccctaattataaagtgtctcaatttggtc 19049913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 269
Target Start/End: Complemental strand, 27410792 - 27410692
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||||||||||||| |||||| ||| | |||  | | |||| |||||||||||||||||||||| ||||||||||||  ||||||| ||||||    
T  27410792 atcatttggtctcttaacttaattttagttttcaatttaatcc-ctaactataaagtgtctcaatttggtc-cataaatcttcttccgtttaccattttg 27410695  T
Q  267 gtc 269  Q
    |||    
T  27410694 gtc 27410692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 285
Target Start/End: Complemental strand, 39592420 - 39592282
Alignment:
Q  147 tttaataattggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatc 246  Q
    |||||| || || ||||| |||||||||||| |||||||||||||  | ||| | ||| || | |||| ||||||||||||||| ||||||   ||  ||    
T  39592420 tttaattataggcttaatatatcatttggtcccttaacttattttatgttttcactttagtcccctaactataaagtgtctcaaattggtccattatgtc 39592321  T
Q  247 ttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||||||||||| |||||||  ||| |||||||||||    
T  39592320 ttctgtcgtttactgttttggttctctccgttaattttt 39592282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 55953970 - 55953861
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgttta 258  Q
    ||||| ||||||||| || |||||||||||||| |||||| | |||||| |  ||| |||||| ||||||||||||||| | |||||||| || ||||||    
T  55953970 ttaatatatcatttgatcccttaacttattttt-gattttcaatttggtcccataactataaaatgtctcaatttggtcccgtaaatcttatgccgttta 55953872  T
Q  259 ctattttggtc 269  Q
    |||||||||||    
T  55953871 ctattttggtc 55953861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 285
Target Start/End: Original strand, 11094544 - 11094649
Alignment:
Q  180 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 279  Q
    |||| |||||||| | ||||| ||||||   |||| |||||||||||| |||||||||  |||||| ||||| |||||||| |||||||| |||||||||    
T  11094544 ttaatttatttttggtttttactttggtctcctaactataaagtgtcttaatttggtcctataaattttctgccgtttactgttttggtcctcttcgtta 11094643  T
Q  280 attttt 285  Q
     |||||    
T  11094644 gttttt 11094649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 30671003 - 30671088
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 256  Q
    |||||||||||||||||||||  ||||| |||||||| |  ||| |||||||||||||||||| ||||| || ||||| |||||||    
T  30671003 tttggtctcttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatttagtctcttatatcttttgtcgtt 30671088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 38419083 - 38419010
Alignment:
Q  212 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    ||||||| |||||| ||||||||||||||||| ||||||| |||||||| |||| ||||||| ||||| |||||    
T  38419083 taattattaagtgtgtcaatttggtctcataagtcttctgccgtttactgttttagtcatctccgttagttttt 38419010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 154 - 285
Target Start/End: Complemental strand, 30683151 - 30683020
Alignment:
Q  154 attggtttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgt 252  Q
    |||||||||||  ||  ||||||| ||||| |||||||| |||||| |||||||| |  ||| |||||||||||||||||||||| ||||||||||| |     
T  30683151 attggtttaatacatgctttggtcccttaatttattttt-gattttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttcggc 30683053  T
Q  253 cgtttactattttggtcatcttcgttaattttt 285  Q
    |||| | | |||||||| ||| ||||| |||||    
T  30683052 cgttaattcttttggtcttctccgttagttttt 30683020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 328
Target Start/End: Complemental strand, 307882 - 307755
Alignment:
Q  201 ttttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatc 300  Q
    |||| ||||||||| ||||||||||||||||||| || ||||| |||||   | ||||||||| ||||||||| ||||  ||||||||||| ||    |     
T  307882 tttttgttctctaactataaagtgtctcaatttgatcccataagtcttcctccatttactattgtggtcatctccgttggttttttaatgtttaaatttt 307783  T
Q  301 ttgatatcattttaaccacttgattgca 328  Q
    ||||||| ||||||||||  ||||||||    
T  307782 ttgatatgattttaaccatatgattgca 307755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 38417611 - 38417682
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 291  Q
    |||||| ||||||||||| |||||||||| ||||||||||||||| |||| ||| ||||| | |||||||||    
T  38417611 aagtgtgtcaatttggtcccataaatcttatgtcgtttactatttcggtcctctccgttagtattttaatgt 38417682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 269
Target Start/End: Complemental strand, 6616322 - 6616220
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||  | ||| | |||||| | |||| ||||||||||||||| |||||| | || || |||||||||||| | |||||    
T  6616322 atcatttggtcccttaacttattttccgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatattctgtcgtttattgttttg 6616223  T
Q  267 gtc 269  Q
    |||    
T  6616222 gtc 6616220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 12396981 - 12396915
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  12396981 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 12396915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 15786957 - 15787075
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||||||  ||||||||||||| | ||| |||||| | | |||| |||||| ||||||||||||||| ||||| | ||||| ||||||  ||| ||    
T  15786957 atcatttggtccattaacttattttttgttttcattttgttcccctaactataaactgtctcaatttggtcccataacttttctgccgtttatcattatg 15787056  T
Q  267 gtcatcttcgttaattttt 285  Q
     || ||| |||||||||||    
T  15787057 atcctctccgttaattttt 15787075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 48207824 - 48207726
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||  ||||||||||||| | ||| ||||||||   |||||||||||||||||||||||||||  |||| ||||||  ||||||| ||| |||||    
T  48207824 tttggtcctttaacttattttttgttttcattttggtctcctaattataaagtgtctcaatttggtcatataactcttctaccgtttacaattgtggtc 48207726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 334
Target Start/End: Complemental strand, 50531814 - 50531700
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccac 319  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||| ||||| |  |||| | || |||||| || || | || |||| |||| ||||      
T  50531814 aagtgtctcaatttggtcccataactcttttgtcgtttactattttagtcatttctgttagtattctaatgtctaatattttttatataatttcaaccgt 50531715  T
Q  320 ttgattgcaggtcta 334  Q
    |||||||||||||||    
T  50531714 ttgattgcaggtcta 50531700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 361
Target Start/End: Original strand, 3528224 - 3528389
Alignment:
Q  196 ttttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatat 295  Q
    ||||||||||||||  ||| |||||||||||||||||||||| ||||| | |||    |||||||| | | ||| ||| | ||| ||||||||||| ||     
T  3528224 ttttattttggttccttaactataaagtgtctcaatttggtcccataagttttcctctgtttactaatgtagtcctctccattagttttttaatgtctaa 3528323  T
Q  296 taatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacac 361  Q
    |  | || || | |||||||||| ||||||||| ||| || ||| |||| |||||||| |||||||    
T  3528324 ttttttttatgtgattttaaccatttgattgcatgtccattgtatctaatagtgaaccgtcaacac 3528389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 17319096 - 17319149
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||||| ||||||||||  ||||||||||||| |||||||||||||||||    
T  17319096 tataaagtgtttcaatttggttccataaatcttctggcgtttactattttggtc 17319149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 6140413 - 6140353
Alignment:
Q  225 tctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||| | ||||| |||||    
T  6140413 tctcaatttggttccataactcttctgtcgtttactattttggtcatttccgttagttttt 6140353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 279
Target Start/End: Complemental strand, 44128441 - 44128333
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    |||||||  |||||||||||||   ||| | |||||| | |||| |||||||||||||||||| |||   |||||||| || |||||||||||||||||     
T  44128441 tttggtcctttaacttatttttcattttcaatttggtcccctaactataaagtgtctcaatttagtcctttaaatcttatgccgtttactattttggtcc 44128342  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  44128341 tctccgtta 44128333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 52882051 - 52881971
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||| |||  ||||||| ||||| |||||||| |||||||||||||| | || | ||||||||||||||||| ||||    
T  52882051 ggtttaatatatgttttggtcccttaatttatttttggattttattttggtcccctgactataaagtgtctcaattaggtc 52881971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 291
Target Start/End: Complemental strand, 56001375 - 56001255
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| ||||||||||||||   ||| |||||||  | |||| ||||||||||||||||||||||  ||||   |||   ||||||||| | |||||     
T  56001375 tttggtcccttaacttattttttattttcattttggccccctaactataaagtgtctcaatttggtcctataagctttcctccgtttactaatgtggtcc 56001276  T
Q  271 tcttcgttaattttttaatgt 291  Q
    ||||||||| |||||||||||    
T  56001275 tcttcgttagttttttaatgt 56001255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 28370765 - 28370682
Alignment:
Q  154 attggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||||||  ||  ||||||| |||||||||||||| ||||| | |||||| |||||| | |||| |||||||||||||||    
T  28370765 attggtttaatacatgctttggtcccttaacttatttttggatttcaatttggtcctctaactttaaactgtctcaatttggtc 28370682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 285
Target Start/End: Original strand, 50530543 - 50530626
Alignment:
Q  202 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||| || ||| ||| |||||||||||  ||||| ||||| |||||| |||||||||||||||||||| |  ||||||||||    
T  50530543 tttggtcctttaactattaagtgtctcaaaatggtcccataactcttctatcgtttactattttggtcatttctgttaattttt 50530626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 269
Target Start/End: Original strand, 56000304 - 56000394
Alignment:
Q  179 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||||||||| |||||| |||||| | | |||| |||||||||||||||||| |||  |||| ||||||| ||||||| |||||||||    
T  56000304 cttaacttattttt-gattttcattttgatcccctaactataaagtgtctcaatttagtcctataactcttctgccgtttaccattttggtc 56000394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 23752025 - 23752091
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||||||||| | |||||| | |||| | |||| |||||||||||||||    
T  23752025 tttggtcccttaacttatttttagatttcaatttggtcccctaactttaaattgtctcaatttggtc 23752091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 26121920 - 26121974
Alignment:
Q  212 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||||||||| |||||||| || ||||||||| |||||||||| |||||||    
T  26121920 taattataaagtgtttcaatttgatcccataaatctcctgtcgtttagtattttg 26121974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 285
Target Start/End: Original strand, 44302729 - 44302843
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| ||||||| ||||||  |||| || |||||  ||||| ||||||||||||||||||| || ||||||| ||||| | ||  || ||||||||     
T  44302729 tttggtcccttaactaatttttgaatttcatattggtcatctaactataaagtgtctcaatttgatcccataaattttctgccattacctcttttggtcc 44302828  T
Q  271 tcttcgttaattttt 285  Q
    ||| ||||| |||||    
T  44302829 tctccgttagttttt 44302843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 53401558 - 53401492
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||| ||||||||||| || |  ||| |||||| |||||||||||||||    
T  53401558 tttggtcccttaacttatttttggattttattttagtcccataactataaactgtctcaatttggtc 53401492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 356
Target Start/End: Original strand, 39590946 - 39591135
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||  ||||| | ||   | ||||||||||||| ||||     
T  39590946 atcatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaaactggtcccttatgccatctgtcgtttactgtttta 39591045  T
Q  267 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatc 356  Q
    ||| ||   |||| |||||| |||| || || | || |||| ||| |||||  ||||||||||||| || |||  | | |||||||||||    
T  39591046 gtcctcgcagttagtttttttatgtctaatatttttaatatgattataaccgtttgattgcaggtccatagtatattacagtgaaccatc 39591135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 43895650 - 43895577
Alignment:
Q  245 tcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaacca 318  Q
    |||||| |||||  ||||||||||||||| ||||||||||||||||| || || | ||||| | ||||||||||    
T  43895650 tcttctctcgttatctattttggtcatctccgttaattttttaatgtctaatatttttgatgtaattttaacca 43895577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 44126605 - 44126705
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctca--atttggtctcataaatcttctgtcgtttactattttggt 268  Q
    ||||||| ||||||||||||||   ||| | ||||||  ||||| ||||||| ||||||  |||||||| | |||||||| || ||||||||||||||||    
T  44126605 tttggtcccttaacttatttttcattttcaatttggtcttctaactataaagagtctcacaatttggtcccttaaatcttatgccgtttactattttggt 44126704  T
Q  269 c 269  Q
    |    
T  44126705 c 44126705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 332
Target Start/End: Original strand, 52658920 - 52659081
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| ||||||||||||||   ||| | |||||| | |||| |||||| ||| ||||||||||   |||||||||||| ||||||| | ||| ||||    
T  52658920 tttggtcccttaacttattttttattttcactttggtcccctaactataaaatgtttcaatttggttctataaatcttctgccgtttaccagtttagtca 52659019  T
Q  271 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 332  Q
    | | ||||  |||||||||||  | || | |||||||  ||| ||||| | |||||||||||    
T  52659020 tttccgtttgttttttaatgttaaatatttttgatattgtttcaaccattcgattgcaggtc 52659081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 38555397 - 38555317
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||| | || ||| ||| |||||||||||||||| ||||| |||||| | |||| |||||||||| | |||||||||    
T  38555397 ggtttaatatctcgttttgtcccttaacttatttttagtttttactttggtcccctaactataaagtgtattaatttggtc 38555317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 29663691 - 29663746
Alignment:
Q  211 ctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||| |||||| ||||||||||||||| ||||| ||||||| ||||||| ||||||    
T  29663691 ctaactataaattgtctcaatttggtcccataactcttctgccgtttaccattttg 29663746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 29686261 - 29686380
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||| ||| |||||||||||||| | ||| | |||||| |  ||| |||||| |||||||| |||||| | ||  |||| |||||||  || |||||    
T  29686261 atcatttagtcccttaacttatttttggttttcactttggtcccttaactataaattgtctcaaattggtcccttatgtcttatgtcgttacctcttttg 29686360  T
Q  267 gtcatcttcgttaatttttt 286  Q
    ||| ||| ||||||||||||    
T  29686361 gtcctctccgttaatttttt 29686380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 52660296 - 52660221
Alignment:
Q  196 ttttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 271  Q
    ||||||||||||   |||| |||||||| ||| |||| |||| ||||||||||||| ||||||| |||||| ||||    
T  52660296 ttttattttggtctcctaactataaagtatcttaattcggtcccataaatcttctgccgtttaccattttgatcat 52660221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 52880830 - 52880889
Alignment:
Q  179 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||||||||  |||||| |||||||| | |||| ||||||||||||||||||||||    
T  52880830 cttaacttattttcggatttttattttggtcccctaactataaagtgtctcaatttggtc 52880889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 526826 - 526760
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| ||||| |||||||  ||||| |||||||| | |||| ||||||||||||||| ||||||    
T  526826 tttggtcccttaatttattttcggatttcattttggtcccctaactataaagtgtctcaacttggtc 526760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 937205 - 937143
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 233  Q
    ||||||| ||||| |||||||  ||||| |||||||| | |||| ||||||||||||||||||    
T  937205 tttggtcccttaatttattttcggatttcattttggtcccctaactataaagtgtctcaattt 937143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 2310889 - 2310823
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||   |||| |||||||| | |||| |||||| |||||||||||||||    
T  2310889 tttggtcccttaacttattttcgaatttcattttggtcccctaactataaaatgtctcaatttggtc 2310823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 30672171 - 30672105
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||  ||||| |||||||| |  ||| | ||||||||||||||||||||    
T  30672171 tttggtcccttaacttattttcggatttcattttggtcccgtaactttaaagtgtctcaatttggtc 30672105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 44690962 - 44690900
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 233  Q
    ||||||| |||||||||||||  ||||| ||||||||||  ||| |||||| |||||||||||    
T  44690962 tttggtcccttaacttattttcggatttcattttggttccataactataaaatgtctcaattt 44690900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 269
Target Start/End: Complemental strand, 47668708 - 47668606
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||||||  ||||||||||||  | ||| | |||||| | |||| ||||||||||||||| |||||| | || ||| |||| |||||| | |||||    
T  47668708 atcatttggtcctttaacttattttctgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatcatctgccgtttattgttttg 47668609  T
Q  267 gtc 269  Q
    |||    
T  47668608 gtc 47668606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 43419437 - 43419384
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||||||||||||||||| | ||| ||||||| ||||  |||||||||||    
T  43419437 tataaagtgtctcaatttggtcccttaactcttctgccgttacctattttggtc 43419384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 44159143 - 44159208
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||| ||||||||||  || || ||||||| |||||| |||||||||||||| ||||| |||||    
T  44159143 aagtgtttcaatttggttccacaactcttctgccgtttattattttggtcatctccgttagttttt 44159208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 56297783 - 56297714
Alignment:
Q  174 ggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    |||| ||||||||||||||  |||| |||||| | |  ||||| |||| |||||||||||||||||||||    
T  56297783 ggtcccttaacttatttttgaatttcattttgatcccttaattttaaactgtctcaatttggtctcataa 56297714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 2309853 - 2309916
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctc-taattataaagtgtctcaatttg 234  Q
    ||||||| ||||| |||||||| ||||| |||||||| ||| |||||||||||||| ||||||||    
T  2309853 tttggtcccttaatttatttttggatttcattttggt-ctcataattataaagtgtttcaatttg 2309916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 26202493 - 26202421
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||| | |||| ||||||||||||||| |||||    
T  26202493 tttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 26202421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 285
Target Start/End: Complemental strand, 31712567 - 31712499
Alignment:
Q  217 ataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    ||||||||| |||||||| || ||||| ||||||  ||||||| ||||||||||| | |||| ||||||    
T  31712567 ataaagtgtttcaatttgatcccataagtcttcttccgtttaccattttggtcatttccgtttattttt 31712499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 291
Target Start/End: Complemental strand, 35789701 - 35789577
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||| |||||||||||||||||| | ||| | |||||| |  ||| |||||||||| ||||  || || | || || || |||||||  ||||||||    
T  35789701 atcatttagtctcttaacttatttttggttttcactttggtcccgtaactataaagtgtttcaaactgatcccttatattttttgtcgttatctattttg 35789602  T
Q  267 gtcatcttcgttaattttttaatgt 291  Q
    ||||||   ||||||||||| ||||    
T  35789601 gtcatcacagttaatttttttatgt 35789577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 43894122 - 43894186
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    |||||||||||||| | ||| | |||||| | |||| |||||| ||||||||||||||| |||||    
T  43894122 cttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcacataa 43894186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 43895704 - 43895648
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtct 227  Q
    ||||||| |||||||||||||| |  |||| |||||| | |||||||||||||||||    
T  43895704 tttggtcccttaacttatttttggtatttagtttggtcccctaattataaagtgtct 43895648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 44655730 - 44655766
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggt 207  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  44655730 tttggtcccttaacttattttttgattttattttggt 44655766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 44664433 - 44664397
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggt 207  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  44664433 tttggtcccttaacttatttttggattttattttggt 44664397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 87)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 19278358 - 19278470
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| ||||| |||||||| |  |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  19278358 atcatttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtcccataattcttctgccgtttactattttg 19278457  T
Q  267 gtcatcttcgtta 279  Q
    ||| |||||||||    
T  19278458 gtcctcttcgtta 19278470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 171 - 286
Target Start/End: Complemental strand, 43936247 - 43936132
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||| ||||| |||||||| |||||| |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||     
T  43936247 tttggtcccttaacttatttttggatttcattttggtcctctaactataaagtttcttaatttggtctcataattcttctgtcgtttactattttggtcc 43936148  T
Q  271 tcttcgttaatttttt 286  Q
    ||| ||||| ||||||    
T  43936147 tctccgttagtttttt 43936132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 212 - 365
Target Start/End: Original strand, 27897742 - 27897896
Alignment:
Q  212 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcatt 311  Q
    |||||||||| ||| ||||||||||| |||||||  | |||| | |||||||||  |||| | | ||||||||||||||||||||| |||||||||||||    
T  27897742 taattataaaatgtttcaatttggtcccataaattatttgtcatctactattttaatcatttcccttaattttttaatgtatattattcttgatatcatt 27897841  T
Q  312 ttaaccacttgattgcaggtctatggtaact-aagagtgaaccatcaacacttga 365  Q
    ||||||||||||||||||||||||  ||  | |||||||||||||| ||||||||    
T  27897842 ttaaccacttgattgcaggtctataatatttaaagagtgaaccatcgacacttga 27897896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 171 - 265
Target Start/End: Original strand, 43935194 - 43935288
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    ||||||| |||||||||||||| ||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43935194 tttggtcccttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttggtctcataaatcttctgccgtttactatttt 43935288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 171 - 265
Target Start/End: Complemental strand, 7347327 - 7347233
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    ||||||| ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||| |||||||||| |||||    
T  7347327 tttggtcccttaacttaattttagattttattttggttccataattataaagtgtctcaatttggtcctataaatcttatgtcgtttaccatttt 7347233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 167 - 291
Target Start/End: Complemental strand, 13446769 - 13446645
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||||||||  || |||| ||||||||||||||||| ||||||||||||| |||||| ||| |||    
T  13446769 atcatttggtcacttaacttatttttggttttcactttggttcttcaactatatagtgtctcaatttggtcccataaatcttctgccgtttattatattg 13446670  T
Q  267 gtcatcttcgttaattttttaatgt 291  Q
    ||| ||| ||||| |||||||||||    
T  13446669 gtcctctccgttagttttttaatgt 13446645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 155 - 279
Target Start/End: Original strand, 22060456 - 22060580
Alignment:
Q  155 ttggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcg 254  Q
    |||| ||||| |||||||||||| |||||||||||||  | ||||| |||||| |||||| |||||||||||||||||||||  || || |||| || ||    
T  22060456 ttggcttaatatatcatttggtcacttaacttattttgtgtttttaatttggtcctctaactataaagtgtctcaatttggttccacaagtcttatgccg 22060555  T
Q  255 tttactattttggtcatcttcgtta 279  Q
    ||||||||||||||||||| |||||    
T  22060556 tttactattttggtcatctccgtta 22060580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 35127850 - 35127934
Alignment:
Q  202 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatttttt 286  Q
    ||||||||||||| |||||| ||||||||||| ||| |||||||||| || ||||||||||||||||||||||||||||| ||||    
T  35127850 tttggttctctaactataaaatgtctcaattttgtcccataaatcttatgccgtttactattttggtcatcttcgttaatatttt 35127934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 24873695 - 24873548
Alignment:
Q  180 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 279  Q
    ||||||||||||| | ||| |||||| | | |||| |||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||| | ||||     
T  24873695 ttaacttattttttgttttcattttgatgccctaactataaagtgtctcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgttt 24873596  T
Q  280 attttttaatgtatattaatcttgatatcattttaaccacttgattgc 327  Q
     ||||||||||| || || | |||||||  ||| ||||| ||||||||    
T  24873595 gttttttaatgtttactatttttgatattgtttcaaccatttgattgc 24873548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 179 - 286
Target Start/End: Original strand, 47163170 - 47163277
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    ||||| |||||||| |||||||||||||| |||||| ||||||||| || ||||||||| |||||||||| |  ||||||||||||||||| ||| ||||    
T  47163170 cttaatttatttttggattttattttggtcctctaactataaagtgccttaatttggtcccataaatctttttccgtttactattttggtcctctccgtt 47163269  T
Q  279 aatttttt 286  Q
    | ||||||    
T  47163270 agtttttt 47163277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 265
Target Start/End: Complemental strand, 4858455 - 4858357
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    ||||||||||| |||||||||||||||| ||| | |||| | | |||| |||||| ||||||||||||||| |||||||||||||| ||||||||||||    
T  4858455 atcatttggtcccttaacttatttttagttttcactttgatcccctaactataaaatgtctcaatttggtcccataaatcttctgttgtttactatttt 4858357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 19279719 - 19279621
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  19279719 tttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaattttttgtcgtttactattttggtc 19279621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 285
Target Start/End: Original strand, 43930317 - 43930442
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgttta 258  Q
    ||||| |||||||||||| |||||||||||||| |||||| | |||||| | |||| ||| ||  ||||||||||||||  |||||||||||||||||||    
T  43930317 ttaatatatcatttggtcccttaacttattttt-gattttcactttggtcccctaactattaaacgtctcaatttggtcctataaatcttctgtcgttta 43930415  T
Q  259 ctattttggtcatcttcgttaattttt 285  Q
    ||||||||||| |||  ||||||||||    
T  43930416 ctattttggtcctctctgttaattttt 43930442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 36702786 - 36702886
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||||||||| |||||||| |  ||| | |||| ||||||||||||||| ||||||| ||||| |||||||||||||| |||    
T  36702786 tttggtcccttaacttatttttagatttcattttggtcccttaactttaaactgtctcaatttggtcccataaatattctgccgtttactattttgatca 36702885  T
Q  271 t 271  Q
    |    
T  36702886 t 36702886  T

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Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 41126248 - 41126360
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| ||||||||||||| |||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  41126248 tttggtcccttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 41126347  T
Q  271 tcttcgttaattt 283  Q
    ||| |||||||||    
T  41126348 tctccgttaattt 41126360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 41516467 - 41516379
Alignment:
Q  155 ttggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    |||||||||| ||||||||||||||||||||||||||| | ||| |||||||| | |||| |||||||||||| ||||||||| |||||    
T  41516467 ttggtttaatatatcatttggtctcttaacttattttttgttttaattttggtcccctaactataaagtgtcttaatttggtcccataa 41516379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 43007767 - 43007662
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgttta 258  Q
    ||||| ||||||||||||  | ||||||||||| |||||| | |||||| |||||| |||||||||||||||||||||| ||||| |||| |||||||||    
T  43007767 ttaatatatcatttggtccttcaacttattttt-gattttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgttta 43007669  T
Q  259 ctatttt 265  Q
    |||||||    
T  43007668 ctatttt 43007662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 181 - 279
Target Start/End: Original strand, 48754015 - 48754113
Alignment:
Q  181 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 279  Q
    ||||||||||||||||||||||||||| |  |||||||||||||| ||||||| |||  ||||||||| |||||||||| ||||| ||| ||| |||||    
T  48754015 taacttatttttagattttattttggtcccataattataaagtgtttcaatttagtcctataaatcttatgtcgtttaccattttagtcctctccgtta 48754113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 154 - 291
Target Start/End: Complemental strand, 40926643 - 40926506
Alignment:
Q  154 attggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtc 253  Q
    ||||| |||||  ||||||| ||| |||||||||||||| | ||| | |||||| | |||| ||||||||||||||||||||||  |||||| ||||  |    
T  40926643 attggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcctataaattttctacc 40926544  T
Q  254 gtttactattttggtcatcttcgttaattttttaatgt 291  Q
    ||||||  |||||||| ||| |||||| ||||||||||    
T  40926543 gtttaccgttttggtcctctccgttaactttttaatgt 40926506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 48672883 - 48672774
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||||||||| |||||||| | ||||| ||||||||  | ||| |||||||||||||||||||| ||||||||   |||||||||||||||| |||    
T  48672883 atttggtctcttaatttattttttgtttttaatttggttccattattgtaaagtgtctcaatttggtcccataaatcgcgtgtcgtttactattttagtc 48672784  T
Q  270 atcttcgtta 279  Q
     ||| |||||    
T  48672783 ctctccgtta 48672774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 22744751 - 22744870
Alignment:
Q  167 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    ||||||||||| |||||||||||||| |||||| | ||| || | |||| |||||||||| |||||||||||  ||||||||| || |||||||||||||    
T  22744751 atcatttggtcccttaacttattttt-gattttcaatttagtcccctaactataaagtgtttcaatttggtcctataaatcttatgccgtttactatttt 22744849  T
Q  266 ggtcatcttcgttaatttttt 286  Q
    |||| ||| ||||||| ||||    
T  22744850 ggtcttctccgttaatatttt 22744870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 43006390 - 43006502
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| ||| |||||||||||||||||| | ||| |||| || ||||| ||||||||    
T  43006390 atcatttggtcccttaacttatttttggttttcaatttggtcccctaactattaagtgtctcaatttggtcccctaagtcttatgccgtttgctattttg 43006489  T
Q  267 gtcatcttcgtta 279  Q
    ||||||| |||||    
T  43006490 gtcatctccgtta 43006502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 269
Target Start/End: Complemental strand, 36703062 - 36702959
Alignment:
Q  167 atcatttggtctcttaacttatttttag-attttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    ||||||||||| |||||||||||||| | |||| ||||| || | |||| | |||| ||||||||||||||| ||||||| ||||| |||||||||||||    
T  36703062 atcatttggtcccttaacttattttttggatttcattttagtcccctaaatttaaactgtctcaatttggtcccataaatattctgccgtttactatttt 36702963  T
Q  266 ggtc 269  Q
    ||||    
T  36702962 ggtc 36702959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 211 - 289
Target Start/End: Original strand, 14206722 - 14206800
Alignment:
Q  211 ctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaat 289  Q
    |||| |||||| ||| |||||||||||  ||||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  14206722 ctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgttagttttttaat 14206800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 211 - 289
Target Start/End: Original strand, 14215412 - 14215490
Alignment:
Q  211 ctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaat 289  Q
    |||| |||||| ||| |||||||||||  ||||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  14215412 ctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgttagttttttaat 14215490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 265
Target Start/End: Complemental strand, 18802500 - 18802402
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    ||||||||||| |||||||||||||| | ||| |||||| | | |||| |||||||||||||||||| ||| ||||||| |||| ||||| ||||||||    
T  18802500 atcatttggtcccttaacttattttttgttttcattttgatcccctaactataaagtgtctcaatttagtcccataaattttctatcgttcactatttt 18802402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 279
Target Start/End: Complemental strand, 22746441 - 22746319
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 256  Q
    ||||||||  || ||||||||  ||||||||||||| | ||| | ||| || | |||| |||||||||||||||||||||| |||||||||| || ||||    
T  22746441 ggtttaatacattatttggtcctttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtt 22746342  T
Q  257 tactattttggtcatcttcgtta 279  Q
    |||||||||| || ||| |||||    
T  22746341 tactattttgatcctctccgtta 22746319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 167 - 332
Target Start/End: Original strand, 14107837 - 14108002
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||||||  ||||||||||||| | ||| |||||||| |  ||| |||||||||||||||  ||||| | || ||||||||||||| ||  |||||    
T  14107837 atcatttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgttcaccgttttg 14107936  T
Q  267 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 332  Q
    ||| ||| ||||| |||||| |||| || || | || |||| ||| |||||  |||||||||||||    
T  14107937 gtcctctccgttagttttttgatgtctaatatttttaatataattataaccgtttgattgcaggtc 14108002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 167 - 332
Target Start/End: Original strand, 14417794 - 14417959
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||||||  ||||||||||||| | ||| |||||||| |  ||| |||||||||||||||  ||||| | || ||||||||||||| ||  |||||    
T  14417794 atcatttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgttcaccgttttg 14417893  T
Q  267 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 332  Q
    ||| ||| ||||| |||||| |||| || || | || |||| ||| |||||  |||||||||||||    
T  14417894 gtcctctccgttagttttttgatgtctaatatttttaatataattataaccgtttgattgcaggtc 14417959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 269
Target Start/End: Original strand, 25153650 - 25153765
Alignment:
Q  154 attggtttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgt 252  Q
    ||||| |||||  ||||||||||| |||||||||||||  |||||| | |||||| | |||| |||||||||||||||||||||| ||||||||||||      
T  25153650 attggcttaatacatcatttggtcccttaacttattttc-gattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttcttc 25153748  T
Q  253 cgtttactattttggtc 269  Q
    |||||||  ||||||||    
T  25153749 cgtttaccgttttggtc 25153765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 160 - 328
Target Start/End: Original strand, 41514996 - 41515162
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| ||||||||| || ||||| |||||||| | ||| |||||||||| |||| |||||||||| ||||||||||| ||||| |||||    ||||||    
T  41514996 ttaatatatcatttg-tcccttaatttatttttggttttaattttggttc-ctaactataaagtgtttcaatttggtcccataagtcttcatatgtttac 41515093  T
Q  260 tattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgca 328  Q
    |||| ||||  ||| ||||||||||||||||| ||    | || |||| |||||||||| |||||||||    
T  41515094 tattgtggttctctccgttaattttttaatgtctaaagttttttatatgattttaaccatttgattgca 41515162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 279
Target Start/End: Complemental strand, 41618606 - 41618498
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||| ||||| |||||||| | ||||||||||||||||| |||||||||   ||  ||||||||||||  || ||||||||     
T  41618606 tttggtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctaaatttggtccattatgtcttctgtcgttacctcttttggtcc 41618507  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  41618506 tctccgtta 41618498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 46675045 - 46674933
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||| || |||||||||||||| | ||| | |||| | |  ||| ||||||||||||| |||||||| |||||||||| || ||||||||||||||    
T  46675045 atcatttgatcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcgatttggtcccataaatcttttgccgtttactattttg 46674946  T
Q  267 gtcatcttcgtta 279  Q
    ||| ||| |||||    
T  46674945 gtcctctccgtta 46674933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 170 - 285
Target Start/End: Original strand, 38406026 - 38406141
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||||  |||| |||||||| | ||| |||||||| | |||| |||||||||||||||  ||||  ||||||||||||| |||||||| ||||||||    
T  38406026 atttggtcctttaatttatttttggttttcattttggtcccctaactataaagtgtctcaaactggttccataaatcttctgacgtttactgttttggtc 38406125  T
Q  270 atcttcgttaattttt 285  Q
     | | |||||||||||    
T  38406126 ctttccgttaattttt 38406141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 4857206 - 4857324
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||| || |||||||||||||| | ||| | |||||| | |||| |||||| |||||| |||||||| || |||||||||| |||||||| ||||     
T  4857206 atcatttgatcccttaacttatttttggttttcactttggtcccctaactataaaatgtctcgatttggtcccacaaatcttctgccgtttactgtttta 4857305  T
Q  267 gtcatcttcgttaattttt 285  Q
    ||| ||| ||||| |||||    
T  4857306 gtcctctccgttagttttt 4857324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 13446388 - 13446450
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 233  Q
    |||||||  |||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  13446388 tttggtcctttaacttatttttgaattttattttggttctctaactataaagtgtctcaattt 13446450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 249
Target Start/End: Complemental strand, 17288327 - 17288249
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 249  Q
    ||||||| |||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||| |||||    
T  17288327 tttggtcccttaacttattttttgttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtcttc 17288249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 18801224 - 18801298
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaat 245  Q
    ||||||| ||||||||||||||  |||| |||||||| | |||| |||||||||||||||||||||| |||||||    
T  18801224 tttggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcccataaat 18801298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 19848941 - 19848867
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaat 245  Q
    ||||||| |||||||||||||| ||||| |||||||| |  ||| |||||||||||||||||||||| |||||||    
T  19848941 tttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataaat 19848867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 33459654 - 33459572
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 249  Q
    ||||||| ||| | |||||||||||| | ||| |||||||| |||||| |||||||||||||||||||||| ||||| |||||    
T  33459654 atcatttagtcccataacttatttttggttttcattttggtcctctaactataaagtgtctcaatttggtcccataagtcttc 33459572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 36673943 - 36673845
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||| |||||||||||||  |||||||||||||| | |||| |||||| ||||||||||||||| | ||  ||||||||||||  || ||||||||    
T  36673943 tttggtcccttaacttattttcggattttattttggtcccctaactataaaatgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtc 36673845  T

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Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 38002621 - 38002555
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||||||||||||||||| |||||| |||||||| |  ||| ||||||||||||||||||||||    
T  38002621 tttggtctcttaacttattttcagatttcattttggtcccttaactataaagtgtctcaatttggtc 38002555  T

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Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 22061906 - 22061794
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||| ||| |||||||||||||  | ||| | |||||| | |||| ||||||  |||||||||||||| |||||||||| || |||||||||||||     
T  22061906 atcattttgtcccttaacttattttgtgttttcaatttggtcccctaactataaaacgtctcaatttggtcccataaatcttatgccgtttactatttta 22061807  T
Q  267 gtcatcttcgtta 279  Q
    ||| ||| |||||    
T  22061806 gtcttctccgtta 22061794  T

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Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 26406180 - 26406248
Alignment:
Q  217 ataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||||||||||||||| |||||||| ||||||| ||||||  ||||||||||||| ||||| |||||    
T  26406180 ataaagtgtctcaatttgatctcataactcttctgccgtttaacattttggtcatctccgttatttttt 26406248  T

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Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 30222655 - 30222763
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    |||||||  |||| |||||||| ||||| |||||||| | ||||||||||||| ||||||||||||| | ||  ||||||||||||  || ||||||||     
T  30222655 tttggtcctttaatttatttttggatttcattttggtcccctaattataaagtatctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 30222754  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  30222755 tctccgtta 30222763  T

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Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 33341306 - 33341373
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctc-taattataaagtgtctcaatttggtc 237  Q
    ||||||||||||||||||||||| ||||||||||||| |||| ||| |||||| |||||||||||||||    
T  33341306 atttggtctcttaacttatttttggattttattttgg-tctcataactataaattgtctcaatttggtc 33341373  T

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Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 34557414 - 34557506
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 271  Q
    |||||||||||||  |||||||||||||| | |||| |||||||||||||||||||||| | ||  |||| || |||||| | ||||||||||    
T  34557414 cttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgtttattcttttggtcat 34557506  T

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Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 45721865 - 45721753
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||||| ||| |||||||| | |||| |||||||||||||||||||||  ||||| | |||   ||||||||| | || || ||| ||||    
T  45721865 cttaacttatttttagttttcattttggtcccctaactataaagtgtctcaatttggttccataagttttcctccgtttactaatgtgatcctctccgtt 45721766  T
Q  279 aattttttaatgt 291  Q
    | |||||||||||    
T  45721765 agttttttaatgt 45721753  T

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Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 25155047 - 25154936
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||| | |  ||| ||||||||||||||||||  |||||||||||||||   |||||  ||||||    
T  25155047 atcatttggtcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttaatctcataaatcttcttctgtttatcattttg 25154948  T
Q  267 gtcatcttcgtt 278  Q
    ||||||| ||||    
T  25154947 gtcatctccgtt 25154936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 1884249 - 1884315
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| ||||||||||||||  ||||||||||||| |  |||||||||| |||||||||||||||    
T  1884249 tttggtcccttaacttatttttgaattttattttggtcccttaattataaaatgtctcaatttggtc 1884315  T

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Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 1970818 - 1970896
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaat 245  Q
    ||||| ||||||||||| |||||||| | ||||| ||||||||  ||| |||||||||| ||||||||||| |||||||    
T  1970818 atcatctggtctcttaatttatttttggtttttactttggttccttaactataaagtgtttcaatttggtcccataaat 1970896  T

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Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 38408392 - 38408283
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgttta 258  Q
    ||||| |||||||||||| ||||| |||||||| |||||| | |||||| |||||| ||||||||||||||| |||||| | ||  ||||||| ||||      
T  38408392 ttaatatatcatttggtcccttaatttattttt-gattttcactttggtcctctaactataaagtgtctcaaattggtcccttatgtcttctgccgttat 38408294  T
Q  259 ctattttggtc 269  Q
    |||||||||||    
T  38408293 ctattttggtc 38408283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 41616633 - 41616699
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  41616633 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 41616699  T

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Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 46458775 - 46458713
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||||||||||| ||||||||||||  ||||||| ||||||||| ||| ||||    
T  46458775 tataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtcctctccgtt 46458713  T

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Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 268
Target Start/End: Complemental strand, 7148157 - 7148068
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 268  Q
    |||||||||||||  | ||| | ||||||  ||||| |||||||||| ||||||||||| | |||||||| ||||||||||| |||||||    
T  7148157 cttaacttattttctgttttcaatttggtcatctaactataaagtgtttcaatttggtcccttaaatcttatgtcgtttactgttttggt 7148068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 332
Target Start/End: Original strand, 25532151 - 25532314
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||| ||  ||||||||||||| | ||| | |||||| | |||| |||||||||| || |||| |||||||||||||| ||  ||||||||||| |    
T  25532151 atcatttgatcctttaacttattttttg-tttcaatttggtcccctaactataaagtgtttcgatttagtctcataaatcttttgcagtttactatttag 25532249  T
Q  267 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 332  Q
     ||   ||||||| ||||||||||| || || | ||||||| |||| ||||| | |||||||||||    
T  25532250 -tctctttcgttagttttttaatgtttaatatttttgatatgatttcaaccattcgattgcaggtc 25532314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 45719664 - 45719721
Alignment:
Q  211 ctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 268  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||| ||||||||    
T  45719664 ctaactataaagtgtctaaatttggtctcataactcttctgttgtttaccattttggt 45719721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 33458315 - 33458426
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||||||  ||||||||||||| | ||| |||||||| || ||| ||||||||||||||| || ||| ||||| ||||||  ||||||||| | ||    
T  33458315 atcatttggtcctttaacttatttttggttttcattttggtcctttaactataaagtgtctcaa-ttagtcccataagtcttcttccgtttactaatgtg 33458413  T
Q  267 gtcatcttcgtta 279  Q
    ||| ||| |||||    
T  33458414 gtcctctccgtta 33458426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 38001513 - 38001613
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||   |||| |||||||| |||||| |||||||||| ||||||||||| | ||  |||| |||||||  || |||||||||    
T  38001513 tttggtcccttaacttattttcgaatttcattttggtcctctaactataaagtgtttcaatttggtcccttatgtcttttgtcgttatctcttttggtca 38001612  T
Q  271 t 271  Q
    |    
T  38001613 t 38001613  T

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Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 43931917 - 43931853
Alignment:
Q  227 tcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 291  Q
    ||||||||||| |||||| |||||||| |||||||||||||||  || ||||| |||||||||||    
T  43931917 tcaatttggtcccataaaccttctgtcatttactattttggtcccctccgttagttttttaatgt 43931853  T

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Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 46457087 - 46457179
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 271  Q
    |||||||||||||| | ||| | |||| | |  ||| |||||||||||||||||||||| ||||||||||||  | ||||| |||||||||||    
T  46457087 cttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttggtcccataaatcttcttccatttaccattttggtcat 46457179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 27899290 - 27899223
Alignment:
Q  202 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||| || ||| |||||| | |||||||||| || |||||||||| ||||||||||||||||||||    
T  27899290 tttggtcctttaactataaaatatctcaatttgatcccataaatcttttgtcgtttactattttggtc 27899223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 48671074 - 48671179
Alignment:
Q  158 gtttaatgtatcatttggtctcttaacttatttttagattttattttggt-tctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 256  Q
    |||||||  ||||||||||||||||| |||||||| | ||||| |||| | ||| ||| |||||||| |||||||||| || |||||||||| || ||||    
T  48671074 gtttaatacatcatttggtctcttaatttatttttggtttttaatttgatctct-taactataaagtatctcaatttgatc-cataaatcttatgccgtt 48671171  T
Q  257 tactattt 264  Q
    ||||||||    
T  48671172 tactattt 48671179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 1885348 - 1885282
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| ||||||||||||||  |||| |||||||| |  |||||||||||| |||||||||||||    
T  1885348 tttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtatctcaatttggtc 1885282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 328
Target Start/End: Complemental strand, 28326497 - 28326340
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||| || ||||| |||||||| | ||||||||||||   || | |||||||||||||||||||||   |||| |||||   ||||||||||| |||||    
T  28326497 atttgatcccttaatttatttttgg-ttttattttggtctcctgactataaagtgtctcaatttggttctataagtcttcctccgtttactattgtggtc 28326399  T
Q  270 atcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgca 328  Q
     ||| ||||| ||||||||||| ||    | || |||| |||||||||| |||||||||    
T  28326398 ctctccgttagttttttaatgtctaaattttttaatatgattttaaccatttgattgca 28326340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 30224083 - 30224017
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||| |||||||||||||||    
T  30224083 tttggtcccttaacttattttcggatttcattttggtcccctaactataaattgtctcaatttggtc 30224017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 34558408 - 34558342
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||| |||||||||||||    
T  34558408 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtc 34558342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 28325078 - 28325153
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||||||| |||||||||||||| | ||| |||||||| | |||| | |||||| ||||||||||||| |||||    
T  28325078 atcatttggtc-cttaacttatttttggttttaattttggtcccctaactttaaagtatctcaatttggtcccataa 28325153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 10256181 - 10256232
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 271  Q
    |||||||||||  ||||||||||| |||||| ||||||| ||||||||||||    
T  10256181 aagtgtctcaaaatggtctcataactcttctatcgtttagtattttggtcat 10256232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 334
Target Start/End: Complemental strand, 10257444 - 10257332
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccac 319  Q
    |||||||||||||||||| ||||| |||  |||||||||||||||| ||||| |  |||| | || |||||| || || | || |||| |||| ||||      
T  10257444 aagtgtctcaatttggtcccataactct--tgtcgtttactattttagtcatttctgttagtattctaatgtctaatattttttatataatttcaaccgt 10257347  T
Q  320 ttgattgcaggtcta 334  Q
    |||||||||||||||    
T  10257346 ttgattgcaggtcta 10257332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 48755655 - 48755592
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 234  Q
    ||||||| ||||||||||||||  |||| |||||||| || ||| |||||| ||||||||||||    
T  48755655 tttggtcccttaacttatttttgaatttcattttggtcctataactataaaatgtctcaatttg 48755592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 2903061 - 2903119
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||||||||  ||||| |||||| ||  |||| ||||||||||||||||||||||    
T  2903061 cttaacttattttcggatttcattttgatttcctaactataaagtgtctcaatttggtc 2903119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 7345923 - 7345989
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||| ||||| |||||||| |  ||| |||||| ||||| |||||||||    
T  7345923 tttggtcccttaacttatttttggatttcattttggtcccataaatataaactgtcttaatttggtc 7345989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 18670610 - 18670544
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||| |||||||||||||| |  ||| | |||| |||||||| ||||||    
T  18670610 tttggtcccttaacttatttttggattttattttggtcccttaactttaaaatgtctcaaattggtc 18670544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 21171593 - 21171527
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||| ||||| | |||||| | |||| | |||| |||||||||||||||    
T  21171593 tttggtcccttaacttatttttggatttcaatttggtcccctaactttaaattgtctcaatttggtc 21171527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 32894918 - 32894884
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttt 191  Q
    ||||||||||||||||||||| |||||||||||||    
T  32894918 ggtttaatgtatcatttggtcccttaacttatttt 32894884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 35128242 - 35128200
Alignment:
Q  227 tcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||||||  ||||||||| ||||||||||||||||||||    
T  35128242 tcaatttggtcctataaatcttatgtcgtttactattttggtc 35128200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 35480217 - 35480278
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 233  Q
    ||||||| |||||||||||||  ||||| ||||||| || |||| ||||||||||||||||||    
T  35480217 tttggtcccttaacttattttcggatttcattttgg-tccctaactataaagtgtctcaattt 35480278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 41127270 - 41127212
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||||||||  ||||| |||||||| | |||| |||||||| |||||||||||||    
T  41127270 cttaacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtc 41127212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 45089489 - 45089598
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||| | ||| |||||||| ||||| | |||||||||||||||||  || ||||||| |||   |||||||||   | ||||| | ||||    
T  45089489 cttaacttatttttggttttcattttggtcctctact-ataaagtgtctcaatttaatcccataaattttcctccgtttactaacgtagtcatatccgtt 45089587  T
Q  279 aattttttaat 289  Q
    |||||||||||    
T  45089588 aattttttaat 45089598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 35315288 - 35315235
Alignment:
Q  212 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    ||||||| |||| | ||||||||||| ||||| |||||||||||||||| ||||    
T  35315288 taattattaagtatgtcaatttggtcccataagtcttctgtcgtttactgtttt 35315235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 269
Target Start/End: Original strand, 46673512 - 46673596
Alignment:
Q  184 cttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||||| | ||| | |||||| | ||||  ||||||||| ||||||||||| |||||||||| || |||||||||| ||||||    
T  46673512 cttatttttggttttcaatttggtcccctaacaataaagtgtttcaatttggtcccataaatcttatg-cgtttactatgttggtc 46673596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 269
Target Start/End: Original strand, 7146799 - 7146886
Alignment:
Q  181 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||||||  | ||| | |||||| | |||| |||||||||| ||||||||||| | |||||||| |||| |||||| ||||||||    
T  7146799 taacttattttctgttttcaatttggtcccctaactataaagtgtttcaatttggtc-cttaaatcttatgtcatttactgttttggtc 7146886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 8439783 - 8439847
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||||||||||  |||| |||||||| |  ||||| |||| ||||||||||||||| |||||    
T  8439783 cttaacttatttttgaatttcattttggtcccttaattgtaaactgtctcaatttggtcccataa 8439847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 33228856 - 33228928
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||||| |||| | ||||||||||||| |||||    
T  33228856 tttggtcccttaacttatttttgaatttcattttggtcccttaattttaaactatctcaatttggtcccataa 33228928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 37373543 - 37373615
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||| | |||| |||||||||||| ||||||||    
T  37373543 tttggtcccttaacttatttttgaatttcattttggtaccttaactttaaactgtctcaatttgatctcataa 37373615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 44114766 - 44114726
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggt 207  Q
    ||||||||||| |||||||||||||||| ||| ||||||||    
T  44114766 atcatttggtcccttaacttatttttagttttcattttggt 44114726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 167 - 278
Target Start/End: Original strand, 43101899 - 43102010
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  43101899 atcatttggtcccttaacttatttttggttttcattttggtcctctaattataaagtgtctcaatttggtcccataattcttctgtcgcttactattttg 43101998  T
Q  267 gtcatcttcgtt 278  Q
     |||||| ||||    
T  43101999 atcatctccgtt 43102010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 54654077 - 54653965
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| ||||| |||||||| |  ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  54654077 atcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgtcgtttactattttg 54653978  T
Q  267 gtcatcttcgtta 279  Q
    ||| ||| |||||    
T  54653977 gtcctctccgtta 54653965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 51825739 - 51825628
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| |||||||||||| |||||||||||||| ||||| | |||||| |  ||| |||||||||| ||||||||||| |||||||||||||||||||||    
T  51825739 ttaatatatcatttggtcccttaacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtcccataaatcttctgtcgtttac 51825640  T
Q  260 tattttggtcat 271  Q
    ||||||||||||    
T  51825639 tattttggtcat 51825628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 47808205 - 47808103
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||| ||||| | ||||||||  ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  47808205 cttaacttatttttggatttcactttggttccttaactataaagtgtctcaatttggtctcataaatcttctgtcgtttgctattttggtcctctccgtt 47808106  T
Q  279 aat 281  Q
    |||    
T  47808105 aat 47808103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 160 - 332
Target Start/End: Complemental strand, 8372734 - 8372562
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| |||| ||||||| |||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||||||  |    ||||||    
T  8372734 ttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaatccacaacagtttac 8372635  T
Q  260 tattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 332  Q
    ||||||||||| || ||||| ||||||||||| || || | ||||||| |||| ||||| | |||||||||||    
T  8372634 tattttggtcacctccgttagttttttaatgtttaatatttttgatatgatttcaaccattcgattgcaggtc 8372562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 11219439 - 11219547
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    |||||||  ||||||||||||| ||||| |||||||| | |||| |||||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  11219439 tttggtccgttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtctcatgagtcttctgccgtttactattttggtca 11219538  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  11219539 tctccgtta 11219547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 171 - 291
Target Start/End: Complemental strand, 11220765 - 11220645
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| ||||||||||||||  |||| |||||||| | |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||     
T  11220765 tttggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcctataaatcttctgtcgtttactattttggtcc 11220666  T
Q  271 tcttcgttaattttttaatgt 291  Q
     || ||||  |||||||||||    
T  11220665 cctccgtttgttttttaatgt 11220645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 29536723 - 29536831
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| ||| |||||||||| ||||| |||||| | |||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||     
T  29536723 tttggtcccttgacttatttttggatttcattttgatcctctaactataaagtgtctcaatttggtcccataaatcttctttcgtttactattttggtcc 29536822  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  29536823 tctccgtta 29536831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 171 - 286
Target Start/End: Complemental strand, 47855445 - 47855330
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||| ||||| |||||||| |  ||| ||||||||||||||||||||||  |||||||||||| |||||||||||||||||     
T  47855445 tttggtcccttaacttatttttggatttcattttggtccgttaactataaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcc 47855346  T
Q  271 tcttcgttaatttttt 286  Q
    ||| ||||| ||||||    
T  47855345 tctccgttattttttt 47855330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 160 - 332
Target Start/End: Complemental strand, 32980570 - 32980398
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| ||||||||| ||  ||||||||||||  | ||| | |||||| | |||| || |||||||||||||||||||  |||||||||||| |||||||    
T  32980570 ttaatatatcatttgatccattaacttattttctgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttctgccgtttac 32980471  T
Q  260 tattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 332  Q
    |||||||||||||| ||||| ||||||||| | ||  | | ||||||| |||| ||||| | |||||||||||    
T  32980470 tattttggtcatctccgttagttttttaatttctaacatttttgatatgatttcaaccattcgattgcaggtc 32980398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 291
Target Start/End: Complemental strand, 25585951 - 25585820
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| ||| |||||||| ||||| ||||||||   ||| | | |||| |||||| ||| ||  ||||||||||||||||||||||||||||||||||||    
T  25585951 ttaatatattatttggtcccttaatttattttttattttcactctggtcctctaactattaaacgtctcaatttggtctcataaatcttctgtcgtttac 25585852  T
Q  260 tattttggtcatcttcgttaattttttaatgt 291  Q
    |||||| ||||||| ||||| |||||||||||    
T  25585851 tattttagtcatctccgttagttttttaatgt 25585820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 285
Target Start/End: Complemental strand, 26799030 - 26798899
Alignment:
Q  154 attggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtc 253  Q
    ||||| |||||  |||||||||||||||||||||||||| | |||||||||||| | |||| |||||| ||||||||||||||| ||||| |||||   |    
T  26799030 attggcttaatacatcatttggtctcttaacttatttttggtttttattttggtcccctaactataaaatgtctcaatttggtcccataattcttcctcc 26798931  T
Q  254 gtttactattttggtcatcttcgttaattttt 285  Q
    |||||| ||||||||| ||| ||||| |||||    
T  26798930 gtttaccattttggtcctctccgttagttttt 26798899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 171 - 361
Target Start/End: Original strand, 48252942 - 48253132
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| ||||||||||| || | |||||||||||| | |||| |||||||||||||||||||||| ||||| |||||   ||||||||| | | ||||    
T  48252942 tttggtcccttaacttattctttgtttttattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtagtca 48253041  T
Q  271 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacac 361  Q
    ||| ||||| ||||||||||| ||    | ||||| | |||||||||| ||||||||| ||| || ||| |||| |||||||  |||||||    
T  48253042 tctccgttagttttttaatgtctaaattttttgatgtgattttaaccatttgattgcatgtccattgtatctaatagtgaactgtcaacac 48253132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 286
Target Start/End: Complemental strand, 13078055 - 13077943
Alignment:
Q  174 ggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatc 272  Q
    ||||||||||||||||||| |||||| | |||||| |||||| |||||| ||||| ||||||||| |||||||||| |||||||||||||||||| | ||    
T  13078055 ggtctcttaacttattttt-gattttcaatttggtcctctaagtataaaatgtcttaatttggtcccataaatcttatgtcgtttactattttggacctc 13077957  T
Q  273 ttcgttaatttttt 286  Q
    ||||||||| ||||    
T  13077956 ttcgttaatatttt 13077943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 171 - 286
Target Start/End: Original strand, 7820399 - 7820514
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| ||||||||||||||  |||| |||||||| |||||| |||||||||| ||||||||| | ||||||| || ||||||||||| ||||||||     
T  7820399 tttggtcccttaacttatttttgaatttcattttggtcctctaactataaagtgtttcaatttggacccataaattttatgtcgtttactgttttggtcc 7820498  T
Q  271 tcttcgttaatttttt 286  Q
    ||| ||||| ||||||    
T  7820499 tctccgttagtttttt 7820514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 8371225 - 8371343
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||| || |||||||||||||| | ||| |||||||| | |||| |||||| ||||||||||||||  |||||||||||||  |||||||||||||    
T  8371225 atcatttgatcccttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggttccataaatcttctgcagtttactattttg 8371324  T
Q  267 gtcatcttcgttaattttt 285  Q
    ||| ||| ||||| |||||    
T  8371325 gtcctctccgttagttttt 8371343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 273
Target Start/End: Original strand, 53808323 - 53808429
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||  | ||| | ||||||   |||| |||||||||||||||| ||||| |||||||||| |||||||||||||||||    
T  53808323 atcatttggtcccttaacttattttcggttttgaatttggtctcctaactataaagtgtctcaatctggtcccataaatcttatgtcgtttactattttg 53808422  T
Q  267 gtcatct 273  Q
    |||||||    
T  53808423 gtcatct 53808429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 42632711 - 42632823
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| ||||||||| |||| | ||| | |||||| | |||| ||||||||||||||||||| || |||||||||| ||||||||||||||||     
T  42632711 atcatttggtcccttaacttacttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttatgtcgtttactatttta 42632810  T
Q  267 gtcatcttcgtta 279  Q
    ||| ||| |||||    
T  42632811 gtcctctccgtta 42632823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 269
Target Start/End: Complemental strand, 42633997 - 42633895
Alignment:
Q  167 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    ||||||||||| |||||||||||||| |||||| | |||||| | |||| |||| ||||||||||||||||| |||||||||| ||||||||| ||||||    
T  42633997 atcatttggtcccttaacttattttt-gattttcaatttggtcccctaactatagagtgtctcaatttggtcccataaatcttatgtcgtttattatttt 42633899  T
Q  266 ggtc 269  Q
    ||||    
T  42633898 ggtc 42633895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 49122120 - 49122011
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctct-aattataaagtgtctcaatttggtctcataaatcttctgtcgttta 258  Q
    ||||| ||||||||||||  ||||||||||||| | ||| |||||||| |||| || |||||||||||||||||||||||||||| | ||||| ||||||    
T  49122120 ttaatatatcatttggtcctttaacttatttttggttttcattttggt-ctcttaactataaagtgtctcaatttggtctcataagttttctgccgttta 49122022  T
Q  259 ctattttggtc 269  Q
    | |||||||||    
T  49122021 ccattttggtc 49122011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 39190823 - 39190763
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 239  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||    
T  39190823 cttaacttatttttagattttattttggtcccctaattataaagtgtctcaatttagtctc 39190763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 41386139 - 41386247
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||  ||||||||||  | |||||||||||||||||     
T  41386139 tttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttacgacgtttactattttggtcc 41386238  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  41386239 tctccgtta 41386247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 51824124 - 51824243
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggt-tctctaattataaagtgtctcaatttggtctcataaatcttctgtcgttta 258  Q
    ||||| ||||||||||||||||||||||||||||| ||||| |||| | ||| ||| | ||||||||||||||||| | |||||||||||||  | ||||    
T  51824124 ttaatatatcatttggtctcttaacttatttttagtttttactttgatctct-taaatttaaagtgtctcaatttgatttcataaatcttctaccattta 51824222  T
Q  259 ctattttggtcatcttcgtta 279  Q
    | ||||| ||||||| |||||    
T  51824223 ccatttttgtcatctgcgtta 51824243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 279
Target Start/End: Complemental strand, 53049144 - 53049036
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||  |||||||||||||| | |||| |||||||||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  53049144 tttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 53049045  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  53049044 tctccgtta 53049036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 10987764 - 10987645
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||| || |||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||||| || || |||||  |||||||    
T  10987764 atcatttgatcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaattttatgccgttttttattttg 10987665  T
Q  267 gtcatcttcgttaatttttt 286  Q
    ||| |||  |||||| ||||    
T  10987664 gtcctctctgttaatatttt 10987645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 328
Target Start/End: Complemental strand, 19253099 - 19252952
Alignment:
Q  181 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaa 280  Q
    |||||||||||| | ||| | |||||| | ||||||||||| |||||||||||| || ||||||| ||||| ||||||| ||||||||| | | |||| |    
T  19253099 taacttatttttggttttcaatttggtcccctaattataaaatgtctcaatttgatcccataaatattctgccgtttaccattttggtcctgtccgttta 19253000  T
Q  281 ttttttaatgtatattaatcttgatatcattttaaccacttgattgca 328  Q
    ||||||||||| || || | || ||||  |||| |||| |||||||||    
T  19252999 ttttttaatgtctaatattttttatattgttttgaccatttgattgca 19252952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 335
Target Start/End: Original strand, 43345373 - 43345492
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaa 315  Q
    |||||| ||| ||||||||||| |||||||||||| |||||||| ||||||||  ||| ||||| ||||||||||| || || | ||||||| |||  ||    
T  43345373 tataaaatgtttcaatttggtcccataaatcttctctcgtttaccattttggttttctccgttagttttttaatgtttaatatttttgatatgattccaa 43345472  T
Q  316 ccacttgattgcaggtctat 335  Q
    ||| | ||||||||||||||    
T  43345473 ccattcgattgcaggtctat 43345492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 23559869 - 23559942
Alignment:
Q  212 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    ||||||| ||||||||||||||| || ||||| ||||||||||||||||||||||||| ||| ||||| |||||    
T  23559869 taattattaagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctccgttagttttt 23559942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 173 - 258
Target Start/End: Complemental strand, 51401456 - 51401371
Alignment:
Q  173 tggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgttta 258  Q
    ||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| ||||||||||||| ||||||    
T  51401456 tggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgttta 51401371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 279
Target Start/End: Complemental strand, 32974330 - 32974222
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||| ||||  || |||||||||    
T  32974330 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtca 32974231  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  32974230 tctccgtta 32974222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 32979097 - 32979177
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctg 251  Q
    ||||||| ||||||| ||||||| |||| |||||||| |||||| ||||||||||||||||||| || ||||||| |||||    
T  32979097 tttggtcccttaactaatttttaaatttcattttggtcctctaactataaagtgtctcaatttgatcccataaattttctg 32979177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 41387544 - 41387432
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| |||||| ||||||||||||||| |||||| |||    ||||||||||||||    
T  41387544 atcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaaccttacaccgtttactattttg 41387445  T
Q  267 gtcatcttcgtta 279  Q
    ||| ||| |||||    
T  41387444 gtcctctccgtta 41387432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 47806835 - 47806934
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||| ||  ||||||||||||  |||||| ||||||||| ||| ||||    
T  47806835 cttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttgatcctataaatcttctgctgtttac-attttggtcctctccgtt 47806933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 53047906 - 53048014
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  53047906 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 53048005  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  53048006 tctccgtta 53048014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 335
Target Start/End: Complemental strand, 53809604 - 53809436
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||| ||| |||||||||||||| | ||| |||||||| | |||| | ||||  |||||||||| ||||||||| | |||   ||||||||| | |     
T  53809604 atcatttagtcccttaacttattttttgttttcattttggtcccctaactttaaaacgtctcaattttgtctcataagttttcctccgtttactaatgtt 53809505  T
Q  267 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctat 335  Q
    ||||||| ||||| ||||||||||| ||    | ||||||| |||||||||| ||||||||| ||||||    
T  53809504 gtcatctccgttagttttttaatgtctaaattttttgatataattttaaccatttgattgcatgtctat 53809436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 196 - 279
Target Start/End: Original strand, 2124063 - 2124146
Alignment:
Q  196 ttttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 279  Q
    ||||| |||||||| |||| |||||| | ||| ||||||||| |||||||||| || ||||||||||||||||||||| |||||    
T  2124063 ttttaatttggttccctaactataaaatatcttaatttggtcccataaatcttatgccgtttactattttggtcatctccgtta 2124146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 25583119 - 25583237
Alignment:
Q  167 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    ||||||| ||| |||||||||||||| |||||| | |||||| | |||| ||| ||  |||||||||||||| ||||| ||||||| |||||||||||||    
T  25583119 atcatttagtcccttaacttattttt-gattttcactttggtcccctaactattaaacgtctcaatttggtcccataagtcttctgccgtttactatttt 25583217  T
Q  266 ggtcatcttcgttaattttt 285  Q
    |||| |||  ||||||||||    
T  25583218 ggtcctctctgttaattttt 25583237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 172 - 279
Target Start/End: Original strand, 39287480 - 39287587
Alignment:
Q  172 ttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 271  Q
    |||||| |||||||||||||  ||||| |||||||| |||||| |||||||||||||||||||||| | ||  | ||||||||||  || |||||||| |    
T  39287480 ttggtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtcccttatgttttctgtcgttacctcttttggtcct 39287579  T
Q  272 cttcgtta 279  Q
    || |||||    
T  39287580 ctccgtta 39287587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 7822093 - 7822027
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| ||||||||| |||| ||||||||||||||   |||||||||||||||||||||||||||    
T  7822093 tttggtcccttaacttaattttggattttattttggtctcctaattataaagtgtctcaatttggtc 7822027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 284
Target Start/End: Original strand, 19622010 - 19622127
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||||||  |||| |||||||| | ||| | |||||| | |||| |||||||||||||||||| |||||||||||||||||   ||||||  ||||    
T  19622010 atcatttggtcctttaagttatttttggttttcactttggtcccctaactataaagtgtctcaatttagtctcataaatcttctgctatttactggtttg 19622109  T
Q  267 gtcatcttcgttaatttt 284  Q
    ||| ||| ||||| ||||    
T  19622110 gtcctctccgttagtttt 19622127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 39133011 - 39133092
Alignment:
Q  156 tggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||||  |||||||| ||||||||||||||||| | ||| | |||||| | |||| ||||||||||||||||||||||    
T  39133011 tggtttaatacatcatttgatctcttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtc 39133092  T

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Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 269
Target Start/End: Complemental strand, 43103414 - 43103305
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| ||| ||||| || ||||||||||||||   |||||||||| | | |||| || ||| | |||||||||||| |||||||| ||||| |||||||    
T  43103414 ttaatatattatttgatcccttaacttattttttatttttattttgatcccctaactacaaaatatctcaatttggtttcataaattttctgccgtttac 43103315  T
Q  260 tattttggtc 269  Q
    ||||||||||    
T  43103314 tattttggtc 43103305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 353
Target Start/End: Complemental strand, 47767048 - 47766876
Alignment:
Q  180 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 279  Q
    ||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||| |||||   ||||||||| | | ||| ||| |||||    
T  47767048 ttaacttatttttggttttcattttggtcc-ctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtcgtcctctgcgtta 47766950  T
Q  280 attttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaacc 353  Q
     ||||||||||| ||    | || || | |||||||||| ||||||||| ||| || ||| |||| ||||||||    
T  47766949 gttttttaatgtctaaatttttttatgtgattttaaccatttgattgcatgtccattgtatctaatagtgaacc 47766876  T

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Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 48825821 - 48825906
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 256  Q
    ||||||| |||||||||||||   ||||||||||| ||| |||| |||||||||||||||||||||| | ||  ||||||||||||    
T  48825821 tttggtcccttaacttattttcgaattttattttgattccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgtt 48825906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 48034026 - 48034086
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 239  Q
    |||||||||||||  |||||||||||||| |||||| ||||||||||||||||||| ||||    
T  48034026 cttaacttattttcggattttattttggtcctctaactataaagtgtctcaatttgatctc 48034086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 286
Target Start/End: Complemental strand, 29537249 - 29537134
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    |||| ||||||||||||||||| ||||| || ||  |   ||||||||||| ||| | ||||| ||| ||||||||||||| ||||||| |||||||||     
T  29537249 tttgttctcttaacttatttttggatttcatctttatctactaattataaaatgttttaatttcgtcccataaatcttctgccgtttacaattttggtcc 29537150  T
Q  271 tcttcgttaatttttt 286  Q
    ||| ||||| ||||||    
T  29537149 tctccgttagtttttt 29537134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 334
Target Start/End: Original strand, 35173212 - 35173319
Alignment:
Q  227 tcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattg 326  Q
    ||||||||||||||||| |||| |||||||||||||||||||||| |   ||| | || |||||| || |||| || |||| |||| ||||  |||||||    
T  35173212 tcaatttggtctcataactcttttgtcgtttactattttggtcatttctattagtattctaatgtctaataatttttatataatttcaaccgtttgattg 35173311  T
Q  327 caggtcta 334  Q
    ||||||||    
T  35173312 caggtcta 35173319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 36626729 - 36626848
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| ||||||||||||  ||||||||||||    ||  | |||||||  |||| ||| |||||| ||||||||||| | |||||||| ||||||||||    
T  36626729 ttaatatatcatttggtcctttaacttattttctatttacaatttggtttcctaactatgaagtgtttcaatttggtcccttaaatcttatgtcgtttac 36626828  T
Q  260 tattttggtcatcttcgtta 279  Q
    | |||||||| |||||||||    
T  36626829 tgttttggtcctcttcgtta 36626848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 49334432 - 49334329
Alignment:
Q  183 acttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatt 282  Q
    |||||||||| | ||| |||||||| || ||| |||||| ||||||||| |||||  |||||||||||  |||||||||||||| ||||||  |||| ||    
T  49334432 acttattttttgttttcattttggtcctttaactataaattgtctcaatatggtccgataaatcttctaccgtttactattttgatcatctctgttagtt 49334333  T
Q  283 tttt 286  Q
    ||||    
T  49334332 tttt 49334329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 19579229 - 19579295
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| ||||||||||||| |||||| |||||||| | |||| |||||| |||||||||||||||    
T  19579229 tttggtcccttaacttattttcagatttcattttggtcccctaactataaaatgtctcaatttggtc 19579295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 32973148 - 32973214
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  32973148 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 32973214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 39288546 - 39288480
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  39288546 tttggtcacttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 39288480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 40502322 - 40502260
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 233  Q
    ||||||| |||||||||||||| |||||||||||||| | |||| |||||||| |||||||||    
T  40502322 tttggtcccttaacttatttttggattttattttggtcccctaactataaagtatctcaattt 40502260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 48035431 - 48035365
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  48035431 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 48035365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 51400224 - 51400322
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||| |||||||||||||| | ||| | |||| ||| |||| |||||||||||||||||| ||| ||||||| ||| | ||| ||| |||||||||    
T  51400224 tttggtcccttaacttatttttggttttcactttgattccctaactataaagtgtctcaatttagtcccataaattttcagccgtataccattttggtc 51400322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 52293630 - 52293564
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  52293630 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 52293564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 269
Target Start/End: Original strand, 54752621 - 54752723
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| ||||||||||||||   ||| | ||| || | |||| ||||||||||||||||||||||   || ||||| || ||||||||||||||    
T  54752621 atcatttggtcccttaacttatttttcattttcaatttagtcccctaactataaagtgtctcaatttggtcctgtatatcttatgccgtttactattttg 54752720  T
Q  267 gtc 269  Q
    |||    
T  54752721 gtc 54752723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 19579401 - 19579316
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 256  Q
    ||||||| |||||||||||||  ||||| |||||||| |  ||| |||||||||||||||||||||| | ||  ||||||||||||    
T  19579401 tttggtcccttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatttggtcccttatgtcttctgtcgtt 19579316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 277
Target Start/End: Complemental strand, 43346505 - 43346448
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgt 277  Q
    |||||| ||||||||||||||||| ||||||||||||||  ||||||||||| |||||    
T  43346505 aagtgtgtcaatttggtctcataactcttctgtcgtttatcattttggtcattttcgt 43346448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 7583479 - 7583547
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 239  Q
    |||||||  ||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||||    
T  7583479 tttggtccattaacttattttcggatttcattttggtccactaactataaagtgtctcaatttggtctc 7583547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 17350231 - 17350143
Alignment:
Q  149 taataattggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||| ||| |||||  ||||||||||| |||||||||||||| | ||| | |||| | | |||| ||||||||||||||||||||||    
T  17350231 taataaatggcttaatacatcatttggtcccttaacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtc 17350143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 53347105 - 53347038
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 239  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||||    
T  53347105 tttggtcccttaacttattttcggatttcattttggtcc-ctaaatataaagtgtctcaatttggtctc 53347038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 33563958 - 33564021
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 234  Q
    ||||||| |||||||||||||| ||||| ||||| || | |||| |||||||||||||||||||    
T  33563958 tttggtcccttaacttatttttggatttcattttagtcccctaactataaagtgtctcaatttg 33564021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 35633236 - 35633299
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 234  Q
    ||||||| |||||||||||||| ||||| |||||||| || ||| |||||| ||||||||||||    
T  35633236 tttggtcccttaacttatttttggatttcattttggtcctataactataaaatgtctcaatttg 35633299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 1301041 - 1301107
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||   ||||||||||||| |  ||| ||||||||||||||||||||||    
T  1301041 tttggtcccttaacttattttcgaattttattttggtcccataactataaagtgtctcaatttggtc 1301107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 5416207 - 5416273
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||| |||||||||||||||    
T  5416207 tttggtcccttaacttattttcggatttcattttggtcccctaactataaaatgtctcaatttggtc 5416273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 11483094 - 11482996
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||| ||||||||||||| |||||| |||||||| |  ||| |||||||||||| |||||| |||| ||  |||| |||||||  || ||||||||    
T  11483094 tttggtcccttaacttattttcagatttcattttggtcccttaactataaagtgtcttaatttgatctcttatgtcttttgtcgttatctcttttggtc 11482996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 46446378 - 46446444
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||||||||| |||||||   ||||||||||||| |  ||||||||||||||||||||| ||||    
T  46446378 tttggtctcttaatttattttcgaattttattttggtgccttaattataaagtgtctcaattcggtc 46446444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 52292603 - 52292665
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 233  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||    
T  52292603 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaattt 52292665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 53342733 - 53342791
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  53342733 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 53342791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 55015724 - 55015662
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 233  Q
    |||||| ||||||||||||||| ||||||| |||||| | |||||| |||| |||||||||||    
T  55015724 tttggtttcttaacttatttttggattttaatttggtcccctaattttaaactgtctcaattt 55015662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 55443657 - 55443591
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||   |||| |||||||| | |||| ||||||||||||||||||||||    
T  55443657 tttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 55443591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 335
Target Start/End: Original strand, 17345319 - 17345483
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||| |||||||||||||| | ||| |  ||||| | |||| || ||||| ||||||||||||  | |||||||||| ||  ||||  ||||||||    
T  17345319 atttggtcccttaacttatttttggttttcaggttggtcccctaactaaaaagtatctcaatttggttccttaaatcttct-tctgttacctttttggtc 17345417  T
Q  270 atcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctat 335  Q
     ||| ||||| ||||||||||| || || | || |||| |||| ||||| | ||||||| ||||||    
T  17345418 ctctccgttagttttttaatgtctaatatttttaatatgatttgaaccattcgattgcatgtctat 17345483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 2225131 - 2225063
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 239  Q
    ||||||| |||||||||||||| ||||| | |||||| | |||| | |||| |||||||||||||||||    
T  2225131 tttggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttggtctc 2225063  T

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Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 19623018 - 19622906
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||| | ||| | ||||||   |||| |||||||||||||||  ||||| | ||  ||||||||||||  ||||||||||||||   |||    
T  19623018 cttaacttattttttgttttcactttggtctcctaactataaagtgtctcaaactggtcccttatgtcttctgtcgttatctattttggtcatcgcagtt 19622919  T
Q  279 aattttttaatgt 291  Q
    |||||||| ||||    
T  19622918 aattttttgatgt 19622906  T

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Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 30431384 - 30431456
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||||| |||| ||||||||||||||| |||||    
T  30431384 tttggtcccttaacttatttttgaatttcattttggtcccttaattttaaactgtctcaatttggtcccataa 30431456  T

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Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 361
Target Start/End: Complemental strand, 45422162 - 45422082
Alignment:
Q  281 ttttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacac 361  Q
    ||||||||||| || || ||||||||| || ||||||| |||||||||||||||| ||| | ||  |||||||| ||||||    
T  45422162 ttttttaatgtctaatattcttgatatgatattaaccatttgattgcaggtctattgtatcaaaccgtgaaccaccaacac 45422082  T

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Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 21127983 - 21128034
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 271  Q
    |||||| ||||||||||| ||||| ||||||| ||||||| |||||||||||    
T  21127983 aagtgtgtcaatttggtcccataactcttctgccgtttaccattttggtcat 21128034  T

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Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 30838588 - 30838505
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||| ||| |||||||| ||||||||||||||  ||||||||||||| |  ||| | |||| | ||||||||||||| |||||    
T  30838588 ttaatatatgatttggtcccttaacttatttttgaattttattttggtcccttaactttaaactatctcaatttggtcccataa 30838505  T

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Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 265
Target Start/End: Complemental strand, 48254995 - 48254902
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    ||||| || |||||||||||||| | ||||||||| | ||| | | ||||||||||||| |||||||| ||||| ||||||| ||||||| |||||    
T  48254995 atttgatcccttaacttattttttgtttttatttt-gatctttgactataaagtgtctc-atttggtcacataactcttctgccgtttaccatttt 48254902  T

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Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 52705404 - 52705349
Alignment:
Q  182 aacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  52705404 aacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 52705349  T

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Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 55442611 - 55442666
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 234  Q
    ||||||||||||| | |||| |||||||| | |||| |||||||||||||||||||    
T  55442611 cttaacttattttcaaatttcattttggtcccctaactataaagtgtctcaatttg 55442666  T

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Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 357
Target Start/End: Complemental strand, 143178 - 143096
Alignment:
Q  275 cgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatca 357  Q
    |||||||||||||||||||| ||    |||| | |||||||||||||||||||||||  || ||| |||| |||| |||||||    
T  143178 cgttaattttttaatgtataatatgtatgatgtgattttaaccacttgattgcaggttcattgtatctaatagtgcaccatca 143096  T

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Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 5417155 - 5417097
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctca 229  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||    
T  5417155 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctca 5417097  T

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Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 357
Target Start/End: Original strand, 21515376 - 21515458
Alignment:
Q  275 cgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatca 357  Q
    |||||||||||||||||||| ||    | || | |||||||||||||||||||||||| || ||| |||| |||| |||||||    
T  21515376 cgttaattttttaatgtataatatgtataatgtgattttaaccacttgattgcaggtccattgtatctaatagtgcaccatca 21515458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 35174481 - 35174375
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||    ||| |||||||| |  ||| ||| |||||| ||||  ||||| ||||| |||||| |||||||||||||||||||| |  |||    
T  35174481 cttaacttattttattttttcattttggtcccttaactattaagtgtttcaaaatggtcccataactcttctatcgtttactattttggtcatttctgtt 35174382  T
Q  279 aattttt 285  Q
    |||||||    
T  35174381 aattttt 35174375  T

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Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 47765444 - 47765561
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||| || ||||||||||||||||  | ||| | |||||| | |||| ||||||||||||||| ||| || | || |||||| || ||||| | |||||    
T  47765444 atcatctgctctcttaacttattttccgttttcactttggtcc-ctaactataaagtgtctcaaattgatcccttatatcttccgttgtttattgttttg 47765542  T
Q  267 gtcatcttcgttaattttt 285  Q
    ||||||| ||||| |||||    
T  47765543 gtcatctccgttagttttt 47765561  T

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Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 47854519 - 47854569
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaa 221  Q
    ||||||| ||||| |||||||| ||||| |||||||| |||||||||||||    
T  47854519 tttggtcccttaatttatttttggatttcattttggtcctctaattataaa 47854569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 12060716 - 12060765
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||||||||||| ||||||| | || || |||||||||||||||||    
T  12060716 aagtgtctcaatttggcctcataactattttgccgtttactattttggtc 12060765  T

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Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 51214273 - 51214201
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||| | |||| ||||||||||||||| |||||    
T  51214273 tttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 51214201  T

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Target: chr2 (Bit Score: 69; Significance: 7e-31; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 12852895 - 12853003
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| ||||||||| |||| ||||| |||||||| | |||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  12852895 tttggtcccttaacttacttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttctatcgtttactattttggtca 12852994  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  12852995 tctccgtta 12853003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 171 - 332
Target Start/End: Original strand, 6706935 - 6707096
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||| ||||| |||||||| | |||| |||||||||||||||||||||  ||||||||||||  |||||||||||||||||     
T  6706935 tttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggttccataaatcttcttccgtttactattttggtcc 6707034  T
Q  271 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 332  Q
     || ||||| |||||||||||  | || |  |||||| |||| ||||| | |||||||||||    
T  6707035 cctccgttagttttttaatgtcaaatatttatgatataatttcaaccattagattgcaggtc 6707096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 25569834 - 25569972
Alignment:
Q  227 tcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattg 326  Q
    ||||||||||| ||||| |||||   |||||| | |||||||  | |  |||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  25569834 tcaatttggtcacataagtcttcctccgtttattgttttggttttttatgttagttttttaatgtatattattcttgatatcattttaaccacttgattg 25569933  T
Q  327 caggtctatggtaactaagagtgaaccatcaacacttga 365  Q
    || |||||| |||  |||||||||||||||| |||||||    
T  25569934 catgtctatagtatttaagagtgaaccatcagcacttga 25569972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 167 - 291
Target Start/End: Complemental strand, 23178993 - 23178869
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||||| ||| | |||||| | |||| |||||| ||| | || |||||| ||||||||||| |||||||| |||||||    
T  23178993 atcatttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttattattttg 23178894  T
Q  267 gtcatcttcgttaattttttaatgt 291  Q
    ||||||| ||||| |||||||||||    
T  23178893 gtcatctccgttagttttttaatgt 23178869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 167 - 291
Target Start/End: Complemental strand, 23590250 - 23590126
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||||| ||| | |||||| | |||| |||||| ||| | || |||||| ||||||||||| |||||||| |||||||    
T  23590250 atcatttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttattattttg 23590151  T
Q  267 gtcatcttcgttaattttttaatgt 291  Q
    ||||||| ||||| |||||||||||    
T  23590150 gtcatctccgttagttttttaatgt 23590126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 180 - 286
Target Start/End: Complemental strand, 6209162 - 6209057
Alignment:
Q  180 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 279  Q
    ||||||||||||| ||||| ||||||||  ||||| |||||||||||| ||||||||| ||||| |||| |||||||||||||||||||| |||||||||    
T  6209162 ttaacttatttttggatttcattttggtcatctaactataaagtgtcttaatttggtcccataattctt-tgtcgtttactattttggtcttcttcgtta 6209064  T
Q  280 atttttt 286  Q
     ||||||    
T  6209063 gtttttt 6209057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 42029069 - 42028957
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||| ||||||| | ||| ||||||||  ||||| ||||||||||||| |||||||| ||||| |||||||||| |||||||||||    
T  42029069 atcatttggtcccttaacgtatttttggttttcattttggtcatctaactataaagtgtctcgatttggtcccataattcttctgtcgcttactattttg 42028970  T
Q  267 gtcatcttcgtta 279  Q
    ||| ||| |||||    
T  42028969 gtcttctccgtta 42028957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 1625074 - 1624968
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||| ||||| |||||| | |||||| ||||||||||||||||||||||  ||||||||| || | ||||||||||||||| ||| ||||    
T  1625074 cttaacttatttttggatttcattttgat-ctctaactataaagtgtctcaatttggtcctataaatcttatgccatttactattttggtcttctccgtt 1624976  T
Q  279 aatttttt 286  Q
    ||||||||    
T  1624975 aatttttt 1624968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 23177678 - 23177797
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctc-taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    ||||||||||| ||||| |||||||| | ||| |||||||| | | ||| |||||||||||||||||||||| ||||||||||||| ||||||| |||||    
T  23177678 atcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttaccatttt 23177777  T
Q  266 ggtcatcttcgttaattttt 285  Q
    |||| ||| ||||| |||||    
T  23177778 ggtcctctccgttagttttt 23177797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 23588935 - 23589054
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctc-taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    ||||||||||| ||||| |||||||| | ||| |||||||| | | ||| |||||||||||||||||||||| ||||||||||||| ||||||| |||||    
T  23588935 atcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttaccatttt 23589034  T
Q  266 ggtcatcttcgttaattttt 285  Q
    |||| ||| ||||| |||||    
T  23589035 ggtcctctccgttagttttt 23589054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 279
Target Start/End: Original strand, 15650436 - 15650558
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 256  Q
    ||||||||  ||| |||| || ||||||||||||||   | ||| |||||| | |||| ||||||||||||||||||||| || |||||||| |||||||    
T  15650436 ggtttaatacatcgtttgatcccttaacttatttttcattgttaatttggtcccctaactataaagtgtctcaatttggtatcttaaatcttatgtcgtt 15650535  T
Q  257 tactattttggtcatcttcgtta 279  Q
    ||||||||||||||||| |||||    
T  15650536 tactattttggtcatctccgtta 15650558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 12854211 - 12854131
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctg 251  Q
    ||||||| |||||||||||||||||||| |||||||| |  ||| |||||||||||||||||||||| |||||||||||||    
T  12854211 tttggtcccttaacttatttttagatttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttctg 12854131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 332
Target Start/End: Complemental strand, 40174821 - 40174711
Alignment:
Q  221 agtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccact 320  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||||||| || || | || |||| |||| ||||| |    
T  40174821 agtgtttcaatttggtcccataaatcttctgttgtttactattttggtcatctccgttagttttttaatgt-taatattttttatatgatttcaaccatt 40174723  T
Q  321 tgattgcaggtc 332  Q
     |||||||||||    
T  40174722 cgattgcaggtc 40174711  T

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Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 294
Target Start/End: Complemental strand, 21012174 - 21012064
Alignment:
Q  184 cttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattt 283  Q
    ||||||||| | ||| |||||| | | |||| |||||||||| ||||||||||| |  |||||||| ||||||||||||||||||||||| ||||| |||    
T  21012174 cttattttttgttttcattttgatcccctaactataaagtgtttcaatttggtccctcaaatcttccgtcgtttactattttggtcatctccgttagttt 21012075  T
Q  284 tttaatgtata 294  Q
    || ||||||||    
T  21012074 ttgaatgtata 21012064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 160 - 291
Target Start/End: Original strand, 12958415 - 12958545
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| ||||||||||| ||||||||||||||| | ||||| |||| | | |||| |||||||||||||||||||||| ||||||| ||||  | ||||     
T  12958415 ttaatatatcatttggt-tcttaacttatttttggtttttaatttgatcccctaactataaagtgtctcaatttggtcccataaattttcttccatttat 12958513  T
Q  260 tattttggtcatcttcgttaattttttaatgt 291  Q
     ||||||||||| | ||||  |||||||||||    
T  12958514 cattttggtcatttccgtttgttttttaatgt 12958545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 7036971 - 7037089
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||||||  ||||||||||||| ||||| | ||| || |  ||| |||||||||| ||||||||||| ||||| ||||||| ||||||| ||||||    
T  7036971 atcatttggtcctttaacttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtcccataagtcttctgccgtttaccattttg 7037070  T
Q  267 gtcatcttcgttaattttt 285  Q
    ||||| | |||| ||||||    
T  7037071 gtcatttccgtttattttt 7037089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 10477351 - 10477419
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggt-tctctaattataaagtgtctcaatttggtctc 239  Q
    |||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||||||||||    
T  10477351 tttggtctcttaacttatttttggatttcattttggtctct-taattataaagtgtctcaatttggtctc 10477419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 14509263 - 14509332
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||||||| | |||| |||| ||||||||||||||||||||||||||||||| ||| |||||||||||    
T  14509263 tataaagtgttttaattcggtcccataaatcttctgtcgtttactattttggtcctctccgttaattttt 14509332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 34039261 - 34039370
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| |||||||| || |||||||||||||||   ||  |||||| |||||||| |||||||| ||| ||||||||||||||| ||||| |||| || |    
T  34039261 ttaatatatcatttagtttcttaacttattttttatttccattttgcttctctaactataaagtatcttaatttggtctcataattcttcggtcgcttgc 34039360  T
Q  260 tattttggtc 269  Q
    ||||||||||    
T  34039361 tattttggtc 34039370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 7038443 - 7038367
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||||||| |||||||||||||| ||||| |||||||| |  ||| |||||||||||||||||||||| |||||    
T  7038443 atcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 7038367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 291
Target Start/End: Original strand, 37867761 - 37867885
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||| | | |||| |||||||||||||||||||||| || |||| |||| |||||||  ||||||    
T  37867761 atcatttggtcccttaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccacaaattttctttcgtttatcattttg 37867860  T
Q  267 gtcatcttcgttaattttttaatgt 291  Q
    ||||| |  |||  |||||||||||    
T  37867861 gtcatgtctgtttgttttttaatgt 37867885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 37869147 - 37869040
Alignment:
Q  171 tttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||| |||||||||||||| |||||| | |||||| |  ||| |||||||||||||||||| ||||||||| |||||||||||||||  ||||||||    
T  37869147 tttggtcccttaacttattttt-gattttcaatttggtcccttaactataaagtgtctcaatttagtctcataagtcttctgtcgtttacctttttggtc 37869049  T
Q  270 atcttcgtt 278  Q
     ||| ||||    
T  37869048 ttctccgtt 37869040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 42027202 - 42027300
Alignment:
Q  171 tttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||| |||||||||||||| |||||| |||||||| |||||| || ||| ||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  42027202 tttggtcccttaacttattttt-gattttcattttggtcctctaactacaaaatgtctcaatttggtcccataaattttctgctgtttactactttggtc 42027300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 171 - 286
Target Start/End: Original strand, 42246600 - 42246715
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||| ||||| | ||| |||||| | | ||||||||||||||| |||||||| || ||||| |||| |  |||||||||||||||||     
T  42246600 tttggtcccttaacttgtttttggttttcattttgatcccctaattataaagtgtttcaatttgatcccataactcttttaccgtttactattttggtcc 42246699  T
Q  271 tcttcgttaatttttt 286  Q
    | ||||||| ||||||    
T  42246700 ttttcgttagtttttt 42246715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 3254865 - 3254931
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||  ||||| |||||||||| ||||||||| |||||||||||||||||    
T  3254865 tttggtcccttaacttattttcggatttcattttggttccctaattatagagtgtctcaatttggtc 3254931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 269
Target Start/End: Original strand, 4829482 - 4829572
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||||||||||| | ||| | ||| || |  ||| |||||| |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  4829482 cttaacttatttttcgttttcactttagtcccttaactataaaatgtctcaatttgatctcataaatcttatgtcgtttactattttggtc 4829572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 33837862 - 33837800
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 233  Q
    ||||||| ||||||||||||| ||||||||||||||| | |||| ||||||||||||||||||    
T  33837862 tttggtcccttaacttattttcagattttattttggtcccctaactataaagtgtctcaattt 33837800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 2581808 - 2581920
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||||||   |||||||||||| | ||| | |||| | | |||| |||||||||||||||||||||| ||||||||||  | |||||||||| |||    
T  2581808 atcatttggtcctctaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttacgccgtttactatcttg 2581907  T
Q  267 gtcatcttcgtta 279  Q
    ||| ||| |||||    
T  2581908 gtcctctccgtta 2581920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 4630183 - 4630123
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 239  Q
    ||||||||||||| |||||| |||||||| | |||| ||||||||||||||||||||||||    
T  4630183 cttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtctc 4630123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 280
Target Start/End: Complemental strand, 14510567 - 14510507
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaa 280  Q
    ||||||||||||||||||  |||| ||||||| ||||||||||||| ||||||||||||||    
T  14510567 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcatcttcgttaa 14510507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 2583643 - 2583576
Alignment:
Q  181 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatctt 248  Q
    |||||||||||| | ||||| ||| || | |||| |||||||||||||||||||||||||||||||||    
T  2583643 taacttatttttggtttttaattttgtcccctaactataaagtgtctcaatttggtctcataaatctt 2583576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 291
Target Start/End: Complemental strand, 3533684 - 3533613
Alignment:
Q  220 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 291  Q
    |||||| |||||||||||||||||||||| ||||||||||||||| | |||| | ||||| | |||||||||    
T  3533684 aagtgtgtcaatttggtctcataaatcttttgtcgtttactatttcgatcatttccgttagtattttaatgt 3533613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 7490271 - 7490204
Alignment:
Q  202 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    |||||| || |||||||||| ||||||||||||||| |||||||||| | | ||||||||||||||||    
T  7490271 tttggtcctttaattataaaatgtctcaatttggtcccataaatcttttattgtttactattttggtc 7490204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 5564068 - 5564134
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||||||||||||||||||||||||||    
T  5564068 tttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaatttggtc 5564134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 5565252 - 5565186
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||||||||||||||||||||||||||    
T  5565252 tttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaatttggtc 5565186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 160 - 285
Target Start/End: Complemental strand, 28109987 - 28109862
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctc-taattataaagtgtctcaatttggtctcataaatcttctgtcgttta 258  Q
    ||||| ||| |||||||| |||||||||||||| | ||| | |||||| ||| |||  ||||||| ||||||||||||| ||||| | |||||| |||||    
T  28109987 ttaatatatgatttggtcccttaacttatttttcgttttcaatttggt-ctcataacgataaagtatctcaatttggtcccataacttttctgtagttta 28109889  T
Q  259 ctattttggtcatcttcgttaattttt 285  Q
    | ||||||||| ||| ||||| |||||    
T  28109888 ccattttggtcctctccgttatttttt 28109862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 289
Target Start/End: Complemental strand, 10368506 - 10368374
Alignment:
Q  157 ggtttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgt 255  Q
    ||||||||  ||||||||||| ||||| |||||||| |||||| | |||| | | |||| ||||||||||||||||||| || ||||||| ||||  |||    
T  10368506 ggtttaatacatcatttggtcccttaatttattttt-gattttcaatttgatcccctaactataaagtgtctcaatttgatcccataaattttcttccgt 10368408  T
Q  256 ttactattttggtcatcttcgttaattttttaat 289  Q
    |||  ||||||||||| | ||||  |||||||||    
T  10368407 ttatcattttggtcatgtccgtttgttttttaat 10368374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 42368415 - 42368343
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    |||||||| |||||||||||||| ||||| |||||||| | |||| ||||||||||||| |||||||| |||||    
T  42368415 atttggtc-cttaacttatttttggatttcattttggtcccctaactataaagtgtctcgatttggtcccataa 42368343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 2305557 - 2305657
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||| ||||| |||||| | | |||| |||||||||||||||||||||| | ||  ||||||| ||||  || |||||||| ||| ||||    
T  2305557 cttaacttatttttggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcctctccgtt 2305656  T
Q  279 a 279  Q
    |    
T  2305657 a 2305657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 4628899 - 4628991
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 271  Q
    |||||||||||||| |||||||||||||| |||||  |||||||| |||||||||| || ||||  |||| || ||||  || ||||||||||    
T  4628899 cttaacttatttttggattttattttggtcctctatatataaagtatctcaatttgatcccatatgtcttttgccgttacctcttttggtcat 4628991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 180 - 268
Target Start/End: Original strand, 11386642 - 11386730
Alignment:
Q  180 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 268  Q
    ||||||||||||||| ||||| |||||| |  ||| |||||||||| |||||||| || |||||| |||||  ||||||| ||||||||    
T  11386642 ttaacttatttttagtttttaatttggtcccttaactataaagtgtttcaatttgatcccataaaccttctaccgtttaccattttggt 11386730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 3666376 - 3666309
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||| |||||||||||||  ||||| |||||||| |  ||| ||||||||||||||||||||||    
T  3666376 atttggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtc 3666309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 3665233 - 3665299
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||  ||||| |||||||| |||||| |||||| ||| |||||||||||    
T  3665233 tttggtcccttaacttattttcggatttcattttggtcctctaactataaaatgtttcaatttggtc 3665299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 15268390 - 15268456
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||||||||||||||||| ||||| |||||| | |  ||| |||||| |||||||||||||||    
T  15268390 tttggtctcttaacttatttttggatttgattttgatcccttaactataaaatgtctcaatttggtc 15268456  T

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Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 29424719 - 29424621
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 269  Q
    ||||||| |||||||||||||| | |||||  ||||| | |||| |||||||||| ||||||||||| | | ||| ||||| |||||| | ||||||||    
T  29424719 tttggtcccttaacttatttttggtttttacattggtcccctaactataaagtgtttcaatttggtcccttgaatattctgccgtttattgttttggtc 29424621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 33836786 - 33836844
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  33836786 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 33836844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 3532244 - 3532305
Alignment:
Q  212 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatct 273  Q
    ||||||| |||||| ||||||||||| ||||| |||| |||| ||||||||||| |||||||    
T  3532244 taattattaagtgtgtcaatttggtcacataagtcttttgtcatttactattttagtcatct 3532305  T

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Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 10367256 - 10367336
Alignment:
Q  179 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    |||||||||||||| |||||| | |||||||   ||| |||||||||||||||||| ||||||||| ||||||| |||||||    
T  10367256 cttaacttattttt-gattttcaatttggtttcttaactataaagtgtctcaatttagtctcataagtcttctgccgtttac 10367336  T

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Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 3255977 - 3255917
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 239  Q
    |||||||||||||  ||||| |||||||| | |||| |||||||||| |||||||||||||    
T  3255977 cttaacttattttcggatttcattttggtcccctaactataaagtgtttcaatttggtctc 3255917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 27264680 - 27264608
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||||||||||||||||||  |||| |||||||| |  ||| | |||| ||||||||||||||| |||||    
T  27264680 tttggtctcttaacttatttttgaatttcattttggtcccttaactttaaattgtctcaatttggtcccataa 27264608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 35799529 - 35799593
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    |||||||||||||| | ||| | ||| || | |||| ||||||||||||||||||||||||||||    
T  35799529 cttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtctcataa 35799593  T

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Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 41312509 - 41312577
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 239  Q
    |||||||  ||||||||||||  ||||| |||||| | |||||| |||||||| |||||||||||||||    
T  41312509 tttggtccattaacttattttcggatttcattttgttcctctaactataaagtatctcaatttggtctc 41312577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 12959823 - 12959724
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| |||| ||||||  ||||||||||||||   ||||| |||||| |  |||  ||||||||||||||||| |||  |||||||||||| |||||||    
T  12959823 ttaatatatcgtttggttccttaacttatttttgatttttaatttggtcccttaacaataaagtgtctcaatttagtccgataaatcttctgccgtttac 12959724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 41313374 - 41313311
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 234  Q
    ||||||| |||||||||||||   ||||||||||||| | |||| |||||||||||| ||||||    
T  41313374 tttggtcccttaacttattttcgaattttattttggtcccctaactataaagtgtctgaatttg 41313311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 237
Target Start/End: Complemental strand, 41796063 - 41795993
Alignment:
Q  167 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| ||| |||||||||||||| |||||| |||||| | | |||| ||||||||||||||||||||||    
T  41796063 atcatttagtcccttaacttattttt-gattttcattttgatcccctaactataaagtgtctcaatttggtc 41795993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 2306767 - 2306702
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| | ||||||||||||||||||||    
T  2306767 tttggtcccttaacttattttg-gatttcattttggtcccctaactgtaaagtgtctcaatttggtc 2306702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 14482198 - 14482132
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| ||||||||||||||  |||| ||||||||||  ||| | ||||| ||||||||||||||    
T  14482198 tttggtcccttaacttatttttgaatttcattttggttccttaactttaaagcgtctcaatttggtc 14482132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 17179069 - 17179135
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| ||||||||||||||  |||||| |||||| | |||| | |||| |||||||||||||||    
T  17179069 tttggtcccttaacttatttttgaattttaatttggtcccctaactttaaactgtctcaatttggtc 17179135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 21010612 - 21010542
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaa 230  Q
    ||||| ||||||||| || |||||||||||||| | ||||||||| ||   |||| |||||||||||||||    
T  21010612 ttaatatatcatttgatcccttaacttattttttgtttttattttagtctcctaactataaagtgtctcaa 21010542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 35801107 - 35801037
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatttttt 286  Q
    |||||||||| ||||||||||| | ||| ||||||| | ||||| | ||||||| ||| ||||||||||||    
T  35801107 tataaagtgtttcaatttggtcccctaactcttctgccatttaccactttggtcctctccgttaatttttt 35801037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 14573915 - 14573854
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatt 232  Q
    ||||||| |||||| ||||||| ||||| |||||||| | |||| ||||||||||| |||||    
T  14573915 tttggtcccttaacatatttttggatttcattttggtcccctaactataaagtgtcacaatt 14573854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 15850721 - 15850652
Alignment:
Q  216 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 285  Q
    |||||| ||| ||||||||||||||||| |||||||  |||  |||||||||||  |||||||| |||||    
T  15850721 tataaaatgtttcaatttggtctcataactcttctgctgttacctattttggtccacttcgttagttttt 15850652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 8538643 - 8538583
Alignment:
Q  259 ctattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccac 319  Q
    ||||||||||||||| ||||||||||||||||  || || | ||||||| |||| ||||||    
T  8538643 ctattttggtcatctccgttaattttttaatgactaatatttttgatataatttcaaccac 8538583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 15816773 - 15816701
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||||||||||||||||||  |||| ||||| || |  ||| | |||| ||||||||||||||| |||||    
T  15816773 tttggtctcttaacttatttttgaatttcattttcgtcccttaactttaaactgtctcaatttggtcccataa 15816701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 43015548 - 43015620
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||| | |||| ||||||||||||||| |||||    
T  43015548 tttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 43015620  T

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Target: scaffold0051 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 167 - 291
Target Start/End: Original strand, 22133 - 22256
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||| || |||| ||||||||| ||||||   || | ||||||| |||||| |||||||||||| || ||||||||||||||||||||||||||||    
T  22133 atcatttgatcccttaccttattttt-gattttcactttgatctctaactataaaatgtctcaatttgttcacataaatcttctgtcgtttactattttg 22231  T
Q  267 gtcatcttcgttaattttttaatgt 291  Q
    ||||||| |||||||||||||||||    
T  22232 gtcatctccgttaattttttaatgt 22256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 170 - 249
Target Start/End: Complemental strand, 40009 - 39930
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 249  Q
    ||||||||||||||||||||||| ||||| | |||||| | |||| |||||||||||||||||||||| |||||||||||    
T  40009 atttggtctcttaacttatttttggatttcactttggtcccctaagtataaagtgtctcaatttggtcccataaatcttc 39930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 12908 - 13021
Alignment:
Q  160 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 259  Q
    ||||| ||| |||||||||||||||||||||||   ||||| |||||| |  |||||||||||||||||||||||||||||||||| || |||||||||     
T  12908 ttaatatattatttggtctcttaacttatttttgatttttactttggtcccataattataaagtgtctcaatttggtctcataaatattttgtcgtttag 13007  T
Q  260 tattttggtcatct 273  Q
    ||||||||| ||||    
T  13008 tattttggtaatct 13021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 739 - 621
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | | | | |||||| | |||| |||||||||||||||||| ||| ||||||||||||| ||||||| ||||||    
T  739 atcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttg 640  T
Q  267 gtcatcttcgttaattttt 285  Q
    ||||||| ||||| |||||    
T  639 gtcatctccgttagttttt 621  T

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Target: scaffold1878 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 535 - 653
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | | | | |||||| | |||| |||||||||||||||||| ||| ||||||||||||| ||||||| ||||||    
T  535 atcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttg 634  T
Q  267 gtcatcttcgttaattttt 285  Q
    ||||||| ||||| |||||    
T  635 gtcatctccgttagttttt 653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 9589 - 9471
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | | | | |||||| | |||| |||||||||||||||||| ||| ||||||||||||| ||||||| ||||||    
T  9589 atcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttg 9490  T
Q  267 gtcatcttcgttaattttt 285  Q
    ||||||| ||||| |||||    
T  9489 gtcatctccgttagttttt 9471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 167 - 332
Target Start/End: Original strand, 8384 - 8549
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||||||| |||||||||||||| | ||| | |||| | | |||| |||||| |||||||| |||||| ||||||||||| ||| |||||||||| |    
T  8384 atcatttggtcccttaacttatttttggttttcactttgctcccctaactataaactgtctcaaattggtcccataaatcttcagtcatttactatttcg 8483  T
Q  267 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 332  Q
    ||||||| ||||| ||||||||||| ||  | |  |||||| |||| ||||| | |||||||||||    
T  8484 gtcatctccgttagttttttaatgtgtaacatttctgatataatttcaaccattcgattgcaggtc 8549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 167 - 260
Target Start/End: Complemental strand, 56811 - 56718
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttact 260  Q
    ||||||||||| |||||||||||||| ||||| | |||||| | |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  56811 atcatttggtcccttaacttattttttgatttcactttggtcccctaattataaagtgtctcaatttggtcctataaatcttctgccgtttact 56718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 249
Target Start/End: Original strand, 54596 - 54678
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 249  Q
    ||||||||| | |||||| || |||| | |||||||||||| || |||||||||||||||||||||||||| |||||||||||    
T  54596 atcatttggccccttaacgtaattttggtttttattttggtcctttaattataaagtgtctcaatttggtcccataaatcttc 54678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 286
Target Start/End: Complemental strand, 2372 - 2257
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||| | ||| |||||||| | ||||||||||||||| ||||||||||| ||||| ||||||   ||||||||||||||||     
T  2372 tttggtcccttaacttatttttggttttcattttggtcccctaattataaagtgtttcaatttggtcccataactcttctactgtttactattttggtcc 2273  T
Q  271 tcttcgttaatttttt 286  Q
    | | ||||| ||||||    
T  2272 tttccgttagtttttt 2257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 1229 - 1334
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 278  Q
    |||||||||||||| | ||| |||||||| | ||||||||||||| |||||||||||||  ||||  |||||  ||||||| ||| ||||| ||| ||||    
T  1229 cttaacttatttttgg-tttcattttggtcccctaattataaagtctctcaatttggtcatataacccttctaccgtttacaattgtggtcctctccgtt 1327  T
Q  279 aattttt 285  Q
    | |||||    
T  1328 atttttt 1334  T

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Target: scaffold2127 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 626 - 514
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||| ||  ||||||||||||| | ||| | || ||| | |||| ||||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  626 atcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgtttactattttg 527  T
Q  267 gtcatcttcgtta 279  Q
    ||| ||| |||||    
T  526 gtcctctccgtta 514  T

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Target: scaffold0177 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 1764 - 1872
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| |||||||||||||  ||||| |||||||| | ||||||||||||||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  1764 tttggtcccttaacttattttcggatttcattttggtcccctaattataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 1863  T
Q  271 tcttcgtta 279  Q
    ||| |||||    
T  1864 tctccgtta 1872  T

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Target: scaffold0155 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 5178 - 5245
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtct 238  Q
    ||||||| |||||||||||||| |||||| ||||||| | |||| |||||||||||||||||||||||    
T  5178 tttggtcccttaacttatttttggattttcttttggtcccctaactataaagtgtctcaatttggtct 5245  T

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Target: scaffold0007 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 145980 - 145861
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    |||||||||| |||||| |||||||| | ||| | |||  | | |||| |||||| ||||| |||||||||  ||||||||| || ||||||||||||||    
T  145980 atcatttggtttcttaatttatttttggttttcaatttaatcccctaactataaaatgtcttaatttggtccaataaatcttatgccgtttactattttg 145881  T
Q  267 gtcatcttcgttaatttttt 286  Q
    ||||||| ||||||| ||||    
T  145880 gtcatctccgttaatatttt 145861  T

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Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 332
Target Start/End: Complemental strand, 42402 - 42292
Alignment:
Q  222 gtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccactt 321  Q
    |||| |||||||| || ||||||||||||||||||||||||||||||| |||  |||| | ||||||||| |||   | ||||||| |||| ||||  ||    
T  42402 gtgtatcaatttgatcccataaatcttctgtcgtttactattttggtcctctctgttagtattttaatgtttatattttttgatatgatttcaaccgttt 42303  T
Q  322 gattgcaggtc 332  Q
    |||||||||||    
T  42302 gattgcaggtc 42292  T

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Target: scaffold0045 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 281
Target Start/End: Complemental strand, 77292 - 77178
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||| |||||||||||||||||| | ||| | ||||||   |||| ||||||| || ||||||||||| ||||||| ||||  |||||||| |||||    
T  77292 atcatttagtctcttaacttattttttgttttcactttggtctcctaactataaagcgtttcaatttggtcccataaatattctaccgtttactgttttg 77193  T
Q  267 gtcatcttcgttaat 281  Q
    ||| ||| |||||||    
T  77192 gtcttctccgttaat 77178  T

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Target: scaffold0045; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 75762 - 75813
Alignment:
Q  179 cttaacttatttttagattttattttggttctctaattataaagtgtctcaa 230  Q
    ||||| |||||||| | ||||| |||||| ||||||||||||||||||||||    
T  75762 cttaatttattttttgtttttactttggtcctctaattataaagtgtctcaa 75813  T

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Target: scaffold0046 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 291
Target Start/End: Complemental strand, 24922 - 24802
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| ||||| |||||||| | ||| | |||||| | ||||||||||||||| ||||||||||| | ||  |||||   ||||  ||||||||||||    
T  24922 tttggtcccttaatttatttttggttttcagtttggtcccctaattataaagtgtttcaatttggtcccttatgtcttcctccgttacctattttggtca 24823  T
Q  271 tcttcgttaattttttaatgt 291  Q
    ||| ||||| |||||||||||    
T  24822 tctccgttagttttttaatgt 24802  T

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Target: scaffold0046; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 23411 - 23494
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttct 250  Q
    ||||| ||||| |||||||||||||| | ||| | |||||| | |||| |||||| ||||||||||||||| ||||| ||||||    
T  23411 atcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataactcttct 23494  T

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Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 167 - 335
Target Start/End: Complemental strand, 73097 - 72929
Alignment:
Q  167 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 266  Q
    ||||||| ||| |||||||||||||| | ||| | |||||| | ||||  |||||||||| ||| |||||||| ||  ||||||||||||  || |||||    
T  73097 atcatttagtcccttaacttatttttggttttcactttggtcccctaacaataaagtgtcacaaattggtctcttatgtcttctgtcgttacctcttttg 72998  T
Q  267 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctat 335  Q
    ||| ||| ||||| |||||| |  |||| || | || |||| ||| |||||  ||||||||||||||||    
T  72997 gtcctctccgttagtttttttaattataatatttttaatatgattataaccgtttgattgcaggtctat 72929  T

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Target: scaffold0084 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 328
Target Start/End: Original strand, 11715 - 11872
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 270  Q
    ||||||| ||||||||||||||   ||| | ||| || | ||||||||||||||| ||||||||||| | ||  ||||||   |||  |||||||||||     
T  11715 tttggtcccttaacttattttttattttcagtttagtcccctaattataaagtgtttcaatttggtcccttatgtcttctccagttacctattttggtcc 11814  T
Q  271 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgca 328  Q
    ||| ||||| ||||||||||| || || | ||||| | |||||||||| | |||||||    
T  11815 tctccgttagttttttaatgtctaatatttttgatgtgattttaaccattcgattgca 11872  T

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Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 271
Target Start/End: Original strand, 96165 - 96269
Alignment:
Q  167 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 265  Q
    |||||||||||  ||||||||||||  |||||| | |||||| | |||| ||||||||||||||||||| ||  |||||||||||  ||||||| |||||    
T  96165 atcatttggtccattaacttattttc-gattttcaatttggtcccctaactataaagtgtctcaatttgatccgataaatcttcttccgtttaccatttt 96263  T
Q  266 ggtcat 271  Q
    ||||||    
T  96264 ggtcat 96269  T

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Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 25931 - 25997
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||||||||||   |||| |||||||| | |||| ||||||||||||||||||||||    
T  25931 tttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 25997  T

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Target: scaffold0038; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 27014 - 26960
Alignment:
Q  180 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 234  Q
    ||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||    
T  27014 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttg 26960  T

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Target: scaffold1827 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1827
Description:

Target: scaffold1827; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 1156 - 1100
Alignment:
Q  180 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||||||||  |||||||||| ||| |||||| ||||||||||||||||||||||    
T  1156 ttaacttattttcggattttattt-ggtcctctaactataaagtgtctcaatttggtc 1100  T

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Target: scaffold0166 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 4284 - 4216
Alignment:
Q  212 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaa 280  Q
    ||||||| ||||||||||||||| |||||||| || |||| ||||||| |||||| || ||| ||||||    
T  4284 taattattaagtgtctcaatttgatctcataactcgtctgccgtttaccattttgttcctctccgttaa 4216  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 458553 - 458501
Alignment:
Q  185 ttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    |||||||  |||||||||||||| | ||||||||||||||||| |||||||||    
T  458553 ttattttcggattttattttggtcccctaattataaagtgtcttaatttggtc 458501  T

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Target: scaffold0687 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 6663 - 6606
Alignment:
Q  179 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggt 236  Q
    ||||| |||||||| |||||| |||||||| ||||||||||||| ||||||||||||||    
T  6663 cttaaattattttt-gattttcattttggtcctctaattataaaatgtctcaatttggt 6606  T

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Target: scaffold0630 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 2019 - 2085
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| ||| |||||||||||||||| |||||||| |  ||| | |||| |||||||||||||||    
T  2019 tttggtcccttgacttatttttagatttcattttggtcccttaactttaaattgtctcaatttggtc 2085  T

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Target: scaffold0064 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 20689 - 20623
Alignment:
Q  171 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 237  Q
    ||||||| |||||| |||||||  |||||| |||||||| |||| | |||| |||||||||||||||    
T  20689 tttggtcccttaacatatttttgaattttaatttggttccctaactttaaactgtctcaatttggtc 20623  T

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Target: scaffold0839 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 233 - 160
Alignment:
Q  170 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 243  Q
    |||||||| ||||||||||||||| |||| |||||| | |  ||||| ||||  |||||||||||||| |||||    
T  233 atttggtcccttaacttatttttaaatttaattttgatcccttaattttaaaccgtctcaatttggtcgcataa 160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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