View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7689_low_14 (Length: 430)
Name: NF7689_low_14
Description: NF7689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7689_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 173; Significance: 7e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 13907989 - 13908208
Alignment:
| Q |
1 |
gtgtatgttatatatgtgaacacttacatggcttaaacggatatgaagtggattaggtttgaagaatcacgaaatatgacaaaac--tggaagaaaattc |
98 |
Q |
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| T |
13907989 |
gtgtatgttatatatgtgaacagtgacatgacttaaacggatatgaagtggattagatttgaagaatcacgaaatatgacaaaacactggaagaaaattc |
13908088 |
T |
|
| Q |
99 |
tatggtgcagaaatttgtggtaagttaatgtgttttaagtttctaaagtcaaatgttttttaactgtatgttccttgatgtaatttgtgtgaatctgcag |
198 |
Q |
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| T |
13908089 |
tagggtgtagaaatttgtggtaagttaatgtgttttaagtttctaaagtcaaatgttttttgactgtatgttccttgatgtaatttgtgtgaatatgtag |
13908188 |
T |
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| Q |
199 |
tgccctaacattgaatgtga |
218 |
Q |
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|||||||||||||||||||| |
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| T |
13908189 |
tgccctaacattgaatgtga |
13908208 |
T |
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