View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7689_low_26 (Length: 348)
Name: NF7689_low_26
Description: NF7689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7689_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 34 - 335
Target Start/End: Original strand, 5397409 - 5397710
Alignment:
| Q |
34 |
ttttgaaacacaaatagtatcacaatgtttactaaagtagatcatgtacattattaaacttactatttttctatcctgagccacgaaagtagaggtgaaa |
133 |
Q |
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| T |
5397409 |
tttttaaacacaaatagtatcacaatgtttactaaagtagatcatgtacattattaaacttactatttttctatcctgagccacgaaagtagaggtgaaa |
5397508 |
T |
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| Q |
134 |
aacaacgagtaattattggggatcaatttagtaacccatgtttcatgtcaaacaggttgtggtttttagtatttgtttttctgaaaacgacagagagtag |
233 |
Q |
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| T |
5397509 |
aacaacgagtaattatcggggatcaatttagtaacccatgtttcatgtcaaacaggttgtggtttttagtatttgtttttctgtaaacgacagagagtag |
5397608 |
T |
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| Q |
234 |
aagtagtaagatgattggatagtgggatacaaaaactcatctttgctttatttcatctcttgaaatgatcccacactttccaactaaccacactacattt |
333 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
5397609 |
aagtagtaagatgattggatagtgggatacaaaaactcatctttgctttatttcatctcttgaaatgatcccacactttccaactaatcacactacattt |
5397708 |
T |
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| Q |
334 |
tg |
335 |
Q |
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|| |
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| T |
5397709 |
tg |
5397710 |
T |
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