View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7690_low_14 (Length: 281)
Name: NF7690_low_14
Description: NF7690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7690_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 4 - 244
Target Start/End: Original strand, 40435743 - 40435983
Alignment:
| Q |
4 |
agtttaatcaaaaacaagcaaatgaggccgctcaaattttaatgtcagtagccacattatcatattgctctcaccttatatggatgtaccacatgtatta |
103 |
Q |
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| T |
40435743 |
agtttaatcaaaaacaagcaaatgaggccgctcaaactttaatgtcagtagccacattatcatattgctctcaccttatatggatgtaccacatgtatta |
40435842 |
T |
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| Q |
104 |
acactttgatttctaagaaaatgcgcattttctcctaaaaaataataaataatcacggtgtgtaagtggaaattaaagagaagccgagtatgtttggtgc |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40435843 |
acactttgatttctaagaaaatgcgcattttctcctaaaaaataataaataatcacggtgtgtaagtggaaattaaagagaagccgagtatgtttggtgc |
40435942 |
T |
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| Q |
204 |
ataaattaacacatttattctctgattcatgacatttcacg |
244 |
Q |
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| T |
40435943 |
ataaattaacacatttattctctgattcatgacatttcacg |
40435983 |
T |
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