View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7691_high_11 (Length: 343)
Name: NF7691_high_11
Description: NF7691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7691_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 18 - 329
Target Start/End: Complemental strand, 6905149 - 6904838
Alignment:
| Q |
18 |
acaaaaagggcaaaaaatagattcaaaagactcaattgattcaagtagtttctcctctaaagctatttcaatgtttctatattcattcatttttctttct |
117 |
Q |
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| T |
6905149 |
acaaaaagggcaaaaaatagattcaaaagactcaattgattcaagtagtttctcctctaaagctatttcaatgtttctatattcattcatttttctttct |
6905050 |
T |
|
| Q |
118 |
ttagttattggagttcgtaatttgaaatatttgtttgcaaggaagacaagaaggacaagtcatcatcacaaccaaaatcaagnnnnnnnggtcgtctgga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |
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| T |
6905049 |
ttagttattggagttcgtaatttgaaatatttgtttgcaaggaagacaagaaggacaagtcatcatcacaaccaaaatcaagaaaaaaaggtcttctgga |
6904950 |
T |
|
| Q |
218 |
ttttttgttctaccaaagcctaatgtagctgcaggcatacagagattgatcaggggtatcaagagtttatctcaattattttgtgagtttaacaacttct |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6904949 |
ttttttgttctaccaaagcctaatgtagctgcaggcatacagagattgatcaggggtatcaagagtttatctcaattattttgtgagtttaacaacttct |
6904850 |
T |
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| Q |
318 |
actttattttat |
329 |
Q |
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|||||||||||| |
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| T |
6904849 |
actttattttat |
6904838 |
T |
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