View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7691_high_23 (Length: 247)
Name: NF7691_high_23
Description: NF7691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7691_high_23 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 39161944 - 39161720
Alignment:
| Q |
1 |
caataatagatgacatgaaaggccaatttagaaataggctatcatctttttcaatcatcttatctttcttactctcactgcttccaacttttgcagcttc |
100 |
Q |
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| T |
39161944 |
caataatagatgacatgaaaggccaatttagaaataggctttcatctttttcaatcatcttatctttcttactctcactgcttccaacttctgcagcttc |
39161845 |
T |
|
| Q |
101 |
cacattgtcagtggactccttgctgccattatggtattgaagtgtttcctgcagttatatgcacgcacacatatacatatatagctgcactacatatata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
39161844 |
cacattgtcagtggactccttgctgccattatggtagtgaagtgtttcctgcagttatatgcacgcacacatatacatatatagccgcactacatatata |
39161745 |
T |
|
| Q |
201 |
tggctgaggaaattaagattcatac |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
39161744 |
tggctgaggaaattaagattcatac |
39161720 |
T |
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