View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7691_low_16 (Length: 334)
Name: NF7691_low_16
Description: NF7691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7691_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 18 - 300
Target Start/End: Original strand, 418445 - 418723
Alignment:
| Q |
18 |
tatactatgtgatagagagcatctgcaggttgatatgtaagtaatattattactgagtttagtagtacagctatatagcttccatataggagacagcttg |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
418445 |
tatactatgtgatagagagcatctgcaggttgatatgtaa----tattattactgagtttagtagtacagctatatagcttccatataggagacagcttg |
418540 |
T |
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| Q |
118 |
acggcttgggattccaatataaatgttctcagctataaatcaaagatgtgggaatcccaattttcataacaaaatttcacatacatgatcactccatttt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
418541 |
acggcttgggattccaatataaatgttctcagctataaatcaaagatgtgggaatcccaattttcataacaaaatttcacatacatgatcactccatttt |
418640 |
T |
|
| Q |
218 |
tgtggtnnnnnnngagtacaagacaaaaggaaaataaataattcattacctaaaaaatgaatgtgtgtgttaatagcatgcat |
300 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
418641 |
tgtggtaaaaaaagagtacaagacaaaaggaaaataaataattcattacctaaaaaatgaatgtgtgtgttaatagcatgcat |
418723 |
T |
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