View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7691_low_21 (Length: 279)
Name: NF7691_low_21
Description: NF7691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7691_low_21 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 37 - 261
Target Start/End: Original strand, 51876211 - 51876435
Alignment:
| Q |
37 |
agagaataagaaaaaagttgaatgagcaagaagtttgtagtacaaaaattaagctatgaagtatggtgttgtcgtttttatcattctgtccggcccataa |
136 |
Q |
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| T |
51876211 |
agagaataagaaaaaagttgaatgagcaagaagtttgtagtacaaaaattaagctatgaagtatggtgttgtcgtttttatcattctgtccgggccataa |
51876310 |
T |
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| Q |
137 |
ttctactgaaaaacactttaattcttccaatgttgaactctcatggattgtacgggccatgatttttcttgtgcatctaagcctcacactacatactata |
236 |
Q |
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| T |
51876311 |
ttctactgaaaaacactttaattcttccaatgttgaactctcatggattgtacgggccatgatttttcttgtgcatctaagcctcacactacatactata |
51876410 |
T |
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| Q |
237 |
tttttcttgaagataatccgtacat |
261 |
Q |
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|||||||||||||||||| |||||| |
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| T |
51876411 |
tttttcttgaagataatcagtacat |
51876435 |
T |
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