View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7691_low_7 (Length: 513)

Name: NF7691_low_7
Description: NF7691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7691_low_7
NF7691_low_7
[»] chr2 (53 HSPs)
chr2 (19-223)||(19180656-19180866)
chr2 (387-507)||(19179891-19180011)
chr2 (256-378)||(8173888-8174020)
chr2 (252-345)||(7495979-7496072)
chr2 (252-345)||(13192987-13193080)
chr2 (252-345)||(15405755-15405848)
chr2 (252-387)||(24138067-24138212)
chr2 (251-345)||(24371965-24372059)
chr2 (254-380)||(12860381-12860517)
chr2 (258-380)||(15744462-15744594)
chr2 (252-380)||(7496292-7496430)
chr2 (256-380)||(19815707-19815841)
chr2 (249-344)||(19816063-19816158)
chr2 (253-380)||(26182013-26182150)
chr2 (255-345)||(38333038-38333128)
chr2 (252-345)||(13193346-13193439)
chr2 (252-345)||(17032592-17032685)
chr2 (248-345)||(26181695-26181792)
chr2 (253-387)||(38332704-38332848)
chr2 (253-345)||(15744805-15744897)
chr2 (247-380)||(19847631-19847774)
chr2 (253-345)||(34735701-34735793)
chr2 (248-339)||(10991846-10991937)
chr2 (252-380)||(33470236-33470374)
chr2 (248-380)||(41474395-41474537)
chr2 (247-345)||(24372325-24372423)
chr2 (253-380)||(29472242-29472379)
chr2 (252-345)||(17050928-17051021)
chr2 (256-345)||(30898659-30898748)
chr2 (253-345)||(8963175-8963267)
chr2 (253-345)||(15406114-15406205)
chr2 (249-345)||(34735339-34735435)
chr2 (258-345)||(7469171-7469258)
chr2 (252-345)||(16305024-16305117)
chr2 (256-345)||(8444825-8444914)
chr2 (265-345)||(16305383-16305463)
chr2 (256-380)||(7469479-7469605)
chr2 (252-380)||(8174198-8174336)
chr2 (258-345)||(17052412-17052499)
chr2 (252-345)||(29472600-29472693)
chr2 (256-380)||(2147888-2148023)
chr2 (258-345)||(41474087-41474174)
chr2 (283-345)||(42834452-42834514)
chr2 (265-334)||(8962372-8962441)
chr2 (277-345)||(2148244-2148312)
chr2 (253-345)||(24138865-24138957)
chr2 (253-345)||(36713588-36713680)
chr2 (258-343)||(8445149-8445234)
chr2 (299-380)||(12860680-12860771)
chr2 (299-380)||(10992164-10992255)
chr2 (265-345)||(36713943-36714023)
chr2 (215-252)||(19180204-19180241)
chr2 (278-334)||(23992211-23992267)
[»] chr4 (87 HSPs)
chr4 (249-380)||(6505533-6505674)
chr4 (251-380)||(25269313-25269452)
chr4 (253-387)||(44991279-44991423)
chr4 (252-387)||(623985-624130)
chr4 (251-345)||(15477643-15477737)
chr4 (249-380)||(53750898-53751039)
chr4 (246-380)||(16037787-16037931)
chr4 (251-380)||(8591967-8592106)
chr4 (253-345)||(8592327-8592419)
chr4 (251-380)||(14985329-14985468)
chr4 (253-345)||(39448846-39448938)
chr4 (253-345)||(53751260-53751352)
chr4 (252-343)||(12817805-12817896)
chr4 (258-345)||(20888148-20888235)
chr4 (252-380)||(24898502-24898640)
chr4 (253-344)||(38339851-38339942)
chr4 (252-380)||(42855338-42855476)
chr4 (265-380)||(30683841-30683966)
chr4 (251-345)||(43734284-43734378)
chr4 (255-345)||(50769179-50769269)
chr4 (255-345)||(52557089-52557179)
chr4 (252-345)||(16038152-16038245)
chr4 (258-380)||(24898194-24898326)
chr4 (252-345)||(44957388-44957481)
chr4 (252-345)||(53995293-53995386)
chr4 (253-345)||(15478003-15478095)
chr4 (253-345)||(44957715-44957807)
chr4 (249-345)||(46849665-46849761)
chr4 (249-345)||(50768817-50768913)
chr4 (250-345)||(19088699-19088794)
chr4 (264-380)||(43734599-43734725)
chr4 (255-345)||(43566380-43566470)
chr4 (247-345)||(53994928-53995026)
chr4 (251-345)||(55022282-55022376)
chr4 (252-345)||(1433629-1433722)
chr4 (252-345)||(4513274-4513367)
chr4 (252-345)||(6711962-6712055)
chr4 (252-345)||(21763539-21763632)
chr4 (248-345)||(23756158-23756255)
chr4 (249-387)||(25181808-25181956)
chr4 (252-345)||(36122791-36122883)
chr4 (252-345)||(44991636-44991729)
chr4 (253-345)||(8398031-8398123)
chr4 (251-380)||(14985644-14985783)
chr4 (253-345)||(38339492-38339584)
chr4 (265-345)||(53259496-53259576)
chr4 (256-380)||(19088344-19088478)
chr4 (254-345)||(30683527-30683618)
chr4 (266-345)||(41752174-41752253)
chr4 (251-380)||(6712276-6712413)
chr4 (251-345)||(12818164-12818258)
chr4 (247-345)||(25182170-25182268)
chr4 (253-343)||(37206787-37206877)
chr4 (267-345)||(39448502-39448580)
chr4 (254-380)||(1433272-1433408)
chr4 (252-345)||(41878216-41878309)
chr4 (252-345)||(44125828-44125921)
chr4 (252-345)||(47603719-47603812)
chr4 (253-345)||(19508413-19508504)
chr4 (252-387)||(41877859-41878003)
chr4 (253-336)||(21763180-21763263)
chr4 (253-380)||(623679-623816)
chr4 (265-380)||(46849982-46850107)
chr4 (265-380)||(52557400-52557525)
chr4 (252-345)||(42855697-42855790)
chr4 (252-345)||(47602942-47603035)
chr4 (256-345)||(49135995-49136084)
chr4 (253-345)||(23755418-23755510)
chr4 (253-345)||(33091453-33091545)
chr4 (255-343)||(36122435-36122523)
chr4 (265-345)||(52692036-52692116)
chr4 (251-387)||(41751816-41751960)
chr4 (285-380)||(19508726-19508831)
chr4 (251-341)||(31214160-31214250)
chr4 (258-345)||(33091811-33091898)
chr4 (252-343)||(50508817-50508908)
chr4 (253-345)||(52692798-52692889)
chr4 (253-380)||(37206428-37206564)
chr4 (274-339)||(55022424-55022489)
chr4 (387-450)||(757753-757816)
chr4 (255-345)||(44125624-44125714)
chr4 (19-212)||(758049-758247)
chr4 (292-345)||(43566736-43566789)
chr4 (299-345)||(53259184-53259230)
chr4 (308-345)||(50508512-50508549)
chr4 (255-298)||(31214250-31214293)
chr4 (194-252)||(757970-758028)
[»] chr1 (73 HSPs)
chr1 (253-345)||(1762674-1762766)
chr1 (250-345)||(16024255-16024350)
chr1 (253-345)||(16023897-16023989)
chr1 (254-387)||(44322966-44323109)
chr1 (248-380)||(12127052-12127194)
chr1 (246-345)||(23476699-23476798)
chr1 (256-380)||(49643674-49643808)
chr1 (243-380)||(12481372-12481519)
chr1 (251-380)||(45053002-45053141)
chr1 (250-345)||(8762757-8762852)
chr1 (253-380)||(23476341-23476478)
chr1 (247-345)||(46593589-46593686)
chr1 (254-380)||(12481060-12481196)
chr1 (256-344)||(20306005-20306093)
chr1 (253-345)||(27547669-27547761)
chr1 (251-345)||(1763032-1763126)
chr1 (255-345)||(6797809-6797899)
chr1 (253-380)||(31703926-31704063)
chr1 (251-345)||(49140141-49140235)
chr1 (252-345)||(26707195-26707288)
chr1 (258-343)||(35612442-35612527)
chr1 (252-345)||(37304027-37304120)
chr1 (256-345)||(38000492-38000581)
chr1 (254-343)||(38127710-38127799)
chr1 (253-345)||(27548027-27548119)
chr1 (253-345)||(37576539-37576631)
chr1 (250-345)||(3089339-3089434)
chr1 (252-343)||(8760271-8760362)
chr1 (252-345)||(2064569-2064662)
chr1 (252-345)||(34967080-34967173)
chr1 (264-345)||(37284739-37284820)
chr1 (258-345)||(10831944-10832031)
chr1 (258-345)||(37304386-37304473)
chr1 (258-345)||(45843475-45843562)
chr1 (252-380)||(49643983-49644121)
chr1 (251-345)||(4696880-4696974)
chr1 (249-380)||(25995780-25995921)
chr1 (251-332)||(10831129-10831210)
chr1 (252-345)||(23598071-23598164)
chr1 (256-345)||(35612085-35612174)
chr1 (256-345)||(37585696-37585785)
chr1 (251-343)||(9006189-9006281)
chr1 (265-345)||(39486214-39486294)
chr1 (252-339)||(32047742-32047829)
chr1 (253-339)||(13109191-13109277)
chr1 (253-339)||(37576181-37576267)
chr1 (265-334)||(5537173-5537242)
chr1 (252-380)||(9006504-9006641)
chr1 (252-345)||(26723159-26723252)
chr1 (265-345)||(6798165-6798245)
chr1 (255-339)||(32048546-32048630)
chr1 (253-345)||(37467578-37467670)
chr1 (258-345)||(4330195-4330282)
chr1 (258-345)||(34966308-34966395)
chr1 (265-380)||(49140456-49140580)
chr1 (252-345)||(45052689-45052782)
chr1 (253-345)||(37285085-37285177)
chr1 (280-339)||(4697163-4697222)
chr1 (258-345)||(46592817-46592904)
chr1 (253-339)||(13183766-13183852)
chr1 (251-345)||(20306360-20306454)
chr1 (252-333)||(5536397-5536478)
chr1 (274-345)||(12127411-12127485)
chr1 (247-339)||(28884011-28884103)
chr1 (255-339)||(28884787-28884871)
chr1 (250-343)||(39486552-39486645)
chr1 (299-380)||(31703660-31703751)
chr1 (275-343)||(37586053-37586121)
chr1 (256-326)||(46289327-46289397)
chr1 (281-333)||(49838756-49838808)
chr1 (299-345)||(49837417-49837463)
chr1 (251-334)||(37466800-37466883)
chr1 (248-317)||(52179365-52179434)
[»] scaffold0115 (2 HSPs)
scaffold0115 (252-380)||(22466-22604)
scaffold0115 (249-345)||(21508-21604)
[»] chr7 (68 HSPs)
chr7 (250-393)||(6356762-6356915)
chr7 (251-380)||(6356598-6356737)
chr7 (253-345)||(7578872-7578964)
chr7 (250-380)||(21391187-21391327)
chr7 (252-380)||(10526310-10526448)
chr7 (253-393)||(21391490-21391640)
chr7 (258-345)||(33716593-33716680)
chr7 (252-345)||(10526668-10526761)
chr7 (253-345)||(1114403-1114495)
chr7 (253-345)||(17749935-17750027)
chr7 (253-345)||(35146699-35146791)
chr7 (253-345)||(41453005-41453097)
chr7 (258-344)||(1114059-1114145)
chr7 (247-345)||(31638301-31638399)
chr7 (253-380)||(44332832-44332969)
chr7 (253-380)||(48626063-48626200)
chr7 (254-343)||(19681496-19681585)
chr7 (254-343)||(36673976-36674065)
chr7 (248-345)||(41192043-41192140)
chr7 (252-345)||(43247414-43247507)
chr7 (258-387)||(41453311-41453450)
chr7 (253-345)||(41891966-41892058)
chr7 (252-343)||(4155597-4155688)
chr7 (258-345)||(4931631-4931718)
chr7 (256-343)||(6356289-6356376)
chr7 (251-345)||(8416483-8416577)
chr7 (255-345)||(8542856-8542946)
chr7 (252-387)||(8936848-8936993)
chr7 (251-345)||(31075551-31075645)
chr7 (274-380)||(36423682-36423798)
chr7 (253-345)||(6357123-6357215)
chr7 (253-345)||(16867707-16867799)
chr7 (251-343)||(19681855-19681947)
chr7 (265-386)||(35146996-35147127)
chr7 (251-380)||(48626376-48626515)
chr7 (274-345)||(7909524-7909595)
chr7 (252-380)||(8542498-8542636)
chr7 (256-380)||(17363551-17363683)
chr7 (251-345)||(28286115-28286209)
chr7 (265-346)||(41751662-41751743)
chr7 (251-380)||(7909285-7909423)
chr7 (277-345)||(17359205-17359273)
chr7 (274-346)||(41752007-41752079)
chr7 (258-345)||(28286475-28286562)
chr7 (256-345)||(31637946-31638035)
chr7 (251-380)||(8937162-8937301)
chr7 (255-339)||(29276877-29276961)
chr7 (251-339)||(29277707-29277795)
chr7 (253-345)||(36282786-36282878)
chr7 (265-343)||(34037271-34037349)
chr7 (253-380)||(41191683-41191819)
chr7 (265-345)||(7579230-7579310)
chr7 (274-345)||(28297840-28297911)
chr7 (265-345)||(8417294-8417374)
chr7 (250-345)||(27739022-27739117)
chr7 (275-345)||(36423391-36423461)
chr7 (258-334)||(36283574-36283651)
chr7 (251-339)||(36674095-36674181)
chr7 (253-330)||(41893448-41893525)
chr7 (281-345)||(33716941-33717005)
chr7 (275-380)||(28298132-28298247)
chr7 (286-343)||(32946701-32946758)
chr7 (252-313)||(36423790-36423851)
chr7 (252-328)||(28263495-28263571)
chr7 (277-334)||(43050408-43050465)
chr7 (251-317)||(35918733-35918799)
chr7 (247-328)||(38677053-38677134)
chr7 (277-333)||(38676082-38676138)
[»] chr5 (35 HSPs)
chr5 (253-380)||(38959036-38959173)
chr5 (253-345)||(38958724-38958816)
chr5 (252-345)||(9989322-9989415)
chr5 (255-345)||(39325414-39325504)
chr5 (256-345)||(25183011-25183100)
chr5 (253-387)||(27185874-27186017)
chr5 (253-345)||(1140123-1140215)
chr5 (251-380)||(27186186-27186325)
chr5 (255-345)||(35569777-35569867)
chr5 (252-345)||(36440558-36440651)
chr5 (253-345)||(39325713-39325805)
chr5 (251-345)||(2182941-2183035)
chr5 (255-345)||(24040087-24040177)
chr5 (254-343)||(19184598-19184687)
chr5 (258-343)||(32288436-32288521)
chr5 (252-345)||(36440199-36440292)
chr5 (254-345)||(32288079-32288170)
chr5 (247-345)||(16860297-16860395)
chr5 (253-380)||(37424262-37424399)
chr5 (264-345)||(11315969-11316050)
chr5 (256-345)||(11316312-11316400)
chr5 (248-345)||(24040445-24040542)
chr5 (258-380)||(37424578-37424709)
chr5 (274-380)||(9989636-9989752)
chr5 (249-343)||(25567348-25567442)
chr5 (274-345)||(2183301-2183372)
chr5 (265-345)||(34264706-34264790)
chr5 (258-328)||(33817659-33817729)
chr5 (253-322)||(19128434-19128503)
chr5 (256-339)||(31756666-31756749)
chr5 (296-345)||(34264405-34264454)
chr5 (264-345)||(35570138-35570219)
chr5 (274-345)||(29198973-29199044)
chr5 (250-334)||(19185553-19185637)
chr5 (251-303)||(34264349-34264401)
[»] chr8 (56 HSPs)
chr8 (248-345)||(1651929-1652026)
chr8 (248-345)||(1740305-1740402)
chr8 (258-345)||(1432136-1432223)
chr8 (247-345)||(1646495-1646593)
chr8 (253-380)||(15048399-15048536)
chr8 (255-345)||(15048757-15048847)
chr8 (251-345)||(33819783-33819877)
chr8 (252-345)||(1646864-1646957)
chr8 (252-345)||(37569313-37569406)
chr8 (253-345)||(27473072-27473164)
chr8 (253-345)||(45276597-45276689)
chr8 (258-345)||(11173992-11174079)
chr8 (257-380)||(1739952-1740085)
chr8 (253-380)||(34470857-34470994)
chr8 (255-345)||(38588945-38589035)
chr8 (243-345)||(45276954-45277056)
chr8 (256-345)||(40660244-40660333)
chr8 (253-345)||(15871621-15871713)
chr8 (250-345)||(27473429-27473524)
chr8 (251-345)||(1870293-1870387)
chr8 (251-345)||(7535191-7535285)
chr8 (253-380)||(40048067-40048196)
chr8 (253-339)||(45077221-45077307)
chr8 (252-345)||(22763291-22763384)
chr8 (252-345)||(33296042-33296135)
chr8 (253-345)||(15871979-15872071)
chr8 (253-345)||(40659983-40660075)
chr8 (274-346)||(44594958-44595030)
chr8 (252-339)||(11920136-11920223)
chr8 (256-380)||(7534845-7534970)
chr8 (252-345)||(45077561-45077654)
chr8 (255-380)||(5434902-5435037)
chr8 (265-345)||(5435258-5435338)
chr8 (277-345)||(27669440-27669508)
chr8 (274-345)||(5152892-5152963)
chr8 (274-345)||(38588608-38588679)
chr8 (265-380)||(7949424-7949549)
chr8 (247-345)||(11707744-11707842)
chr8 (254-380)||(5152536-5152671)
chr8 (252-335)||(24652822-24652905)
chr8 (252-339)||(24666042-24666129)
chr8 (253-380)||(1869934-1870070)
chr8 (256-335)||(44594604-44594683)
chr8 (256-343)||(33295739-33295826)
chr8 (265-345)||(22762525-22762605)
chr8 (274-330)||(27669793-27669849)
chr8 (253-328)||(12643891-12643966)
chr8 (253-328)||(15741607-15741682)
chr8 (274-341)||(33819975-33820042)
chr8 (275-345)||(37569673-37569743)
chr8 (256-345)||(40048412-40048501)
chr8 (253-345)||(15740613-15740705)
chr8 (251-312)||(11920074-11920135)
chr8 (248-326)||(29770376-29770454)
chr8 (391-441)||(31824739-31824789)
chr8 (274-306)||(18298612-18298644)
[»] chr3 (98 HSPs)
chr3 (251-380)||(4757806-4757945)
chr3 (250-345)||(39664181-39664276)
chr3 (253-380)||(10506261-10506398)
chr3 (251-380)||(1994167-1994306)
chr3 (251-380)||(1999326-1999465)
chr3 (251-380)||(5900736-5900875)
chr3 (253-345)||(54108260-54108352)
chr3 (258-345)||(39241363-39241450)
chr3 (249-343)||(18464816-18464910)
chr3 (251-345)||(54107900-54107994)
chr3 (252-345)||(51509118-51509211)
chr3 (255-380)||(1994481-1994616)
chr3 (253-345)||(22201974-22202066)
chr3 (253-345)||(26318182-26318274)
chr3 (265-345)||(27801501-27801581)
chr3 (251-380)||(27801802-27801941)
chr3 (251-345)||(4773241-4773335)
chr3 (252-387)||(21569051-21569196)
chr3 (247-345)||(28986499-28986597)
chr3 (251-345)||(32633423-32633517)
chr3 (253-343)||(44317575-44317665)
chr3 (247-345)||(44893734-44893832)
chr3 (252-345)||(4757493-4757586)
chr3 (252-345)||(5900422-5900515)
chr3 (252-345)||(18464455-18464548)
chr3 (258-380)||(47669264-47669396)
chr3 (252-345)||(53716294-53716386)
chr3 (247-343)||(13866014-13866110)
chr3 (253-345)||(15986592-15986684)
chr3 (253-345)||(24428925-24429017)
chr3 (253-345)||(45307050-45307142)
chr3 (256-380)||(10505951-10506085)
chr3 (254-345)||(16931964-16932055)
chr3 (242-345)||(22201605-22201708)
chr3 (252-380)||(42592097-42592235)
chr3 (252-343)||(49528148-49528239)
chr3 (258-393)||(8474146-8474291)
chr3 (251-345)||(26318540-26318634)
chr3 (248-387)||(39664490-39664639)
chr3 (253-380)||(42591784-42591921)
chr3 (251-345)||(44894098-44894192)
chr3 (248-387)||(45306827-45306976)
chr3 (253-380)||(47669572-47669709)
chr3 (249-380)||(54752476-54752617)
chr3 (252-345)||(11256461-11256554)
chr3 (256-345)||(47303374-47303463)
chr3 (265-345)||(12791534-12791614)
chr3 (253-345)||(28985509-28985601)
chr3 (252-380)||(46152614-46152752)
chr3 (252-343)||(53716653-53716744)
chr3 (253-380)||(12203551-12203688)
chr3 (249-345)||(7681481-7681578)
chr3 (265-387)||(21568758-21568890)
chr3 (252-345)||(24428566-24428659)
chr3 (258-380)||(29818182-29818314)
chr3 (255-380)||(29818490-29818625)
chr3 (266-345)||(7163463-7163542)
chr3 (274-345)||(8473867-8473938)
chr3 (266-345)||(12203909-12203988)
chr3 (274-345)||(19883598-19883669)
chr3 (258-345)||(21969634-21969721)
chr3 (258-345)||(21992070-21992157)
chr3 (252-345)||(16931605-16931698)
chr3 (252-345)||(4773600-4773693)
chr3 (252-345)||(11256102-11256195)
chr3 (265-387)||(15986247-15986379)
chr3 (251-380)||(22151843-22151982)
chr3 (258-345)||(41835284-41835371)
chr3 (252-387)||(47303018-47303163)
chr3 (252-345)||(22152203-22152298)
chr3 (265-345)||(54752175-54752255)
chr3 (252-339)||(30681781-30681868)
chr3 (255-345)||(21969987-21970079)
chr3 (255-345)||(21992423-21992515)
chr3 (292-345)||(41834965-41835018)
chr3 (265-329)||(15790691-15790755)
chr3 (252-339)||(42853245-42853331)
chr3 (279-345)||(39951383-39951449)
chr3 (252-345)||(15791467-15791555)
chr3 (252-345)||(20963583-20963676)
chr3 (281-345)||(46152968-46153032)
chr3 (278-387)||(51509425-51509543)
chr3 (252-339)||(30681028-30681115)
chr3 (258-345)||(43844393-43844480)
chr3 (19-212)||(36989124-36989322)
chr3 (19-212)||(37014563-37014761)
chr3 (387-450)||(36989560-36989623)
chr3 (387-450)||(37015000-37015063)
chr3 (277-334)||(43839984-43840041)
chr3 (277-334)||(13866969-13867026)
chr3 (277-334)||(49529125-49529182)
chr3 (390-441)||(27006571-27006622)
chr3 (390-441)||(39160883-39160934)
chr3 (194-252)||(36989348-36989406)
chr3 (194-252)||(37014787-37014845)
chr3 (385-441)||(36874825-36874881)
chr3 (344-380)||(39241671-39241707)
chr3 (252-328)||(44316626-44316702)
[»] scaffold0186 (2 HSPs)
scaffold0186 (253-380)||(24475-24612)
scaffold0186 (252-345)||(24161-24254)
[»] scaffold0029 (2 HSPs)
scaffold0029 (251-345)||(72760-72854)
scaffold0029 (252-380)||(73074-73212)
[»] chr6 (66 HSPs)
chr6 (251-345)||(3423168-3423262)
chr6 (253-345)||(2517360-2517452)
chr6 (255-380)||(32753486-32753621)
chr6 (255-346)||(6236278-6236369)
chr6 (252-380)||(21856554-21856692)
chr6 (255-345)||(6137735-6137825)
chr6 (251-345)||(9046444-9046538)
chr6 (251-345)||(34891002-34891095)
chr6 (253-387)||(9046086-9046230)
chr6 (252-345)||(18052955-18053048)
chr6 (255-380)||(15932869-15933004)
chr6 (253-345)||(35167490-35167582)
chr6 (258-345)||(2517007-2517094)
chr6 (252-380)||(32993328-32993466)
chr6 (251-345)||(978413-978507)
chr6 (253-343)||(17244664-17244754)
chr6 (251-345)||(34517270-34517364)
chr6 (258-380)||(5938126-5938258)
chr6 (252-345)||(6137378-6137470)
chr6 (252-345)||(18053311-18053404)
chr6 (256-345)||(34994383-34994472)
chr6 (249-345)||(5937809-5937905)
chr6 (255-380)||(25176665-25176800)
chr6 (258-387)||(31237751-31237890)
chr6 (252-380)||(21856868-21857006)
chr6 (251-345)||(15932728-15932822)
chr6 (252-345)||(7269950-7270043)
chr6 (252-345)||(7270987-7271080)
chr6 (249-345)||(5311184-5311280)
chr6 (253-345)||(32753177-32753269)
chr6 (258-345)||(31247121-31247208)
chr6 (251-345)||(7438802-7438896)
chr6 (265-387)||(5310838-5310970)
chr6 (252-345)||(6235920-6236013)
chr6 (256-345)||(14276402-14276491)
chr6 (252-345)||(34890643-34890736)
chr6 (253-345)||(6532192-6532284)
chr6 (251-343)||(26600355-26600447)
chr6 (253-337)||(31238113-31238196)
chr6 (253-337)||(31247482-31247566)
chr6 (253-345)||(34518050-34518142)
chr6 (258-345)||(5639531-5639618)
chr6 (251-345)||(21540335-21540430)
chr6 (274-344)||(24744349-24744419)
chr6 (253-380)||(26957274-26957411)
chr6 (247-345)||(34994738-34994836)
chr6 (251-332)||(25180219-25180300)
chr6 (264-345)||(26600705-26600786)
chr6 (253-343)||(6228730-6228819)
chr6 (255-345)||(10412859-10412949)
chr6 (255-345)||(32993017-32993107)
chr6 (258-345)||(29260536-29260623)
chr6 (251-345)||(29261309-29261403)
chr6 (252-325)||(35167833-35167906)
chr6 (252-380)||(7270266-7270404)
chr6 (258-329)||(15286350-15286421)
chr6 (251-345)||(26956967-26957054)
chr6 (299-345)||(3035926-3035972)
chr6 (253-329)||(24744695-24744770)
chr6 (253-339)||(27829329-27829414)
chr6 (251-345)||(34251552-34251644)
chr6 (289-345)||(7270665-7270721)
chr6 (251-334)||(17245629-17245712)
chr6 (299-345)||(3423528-3423574)
chr6 (277-334)||(6229692-6229748)
chr6 (344-380)||(25176970-25177006)
[»] scaffold0220 (1 HSPs)
scaffold0220 (252-380)||(20750-20888)
[»] scaffold0134 (2 HSPs)
scaffold0134 (252-380)||(14448-14586)
scaffold0134 (250-380)||(14132-14272)
[»] scaffold0003 (4 HSPs)
scaffold0003 (251-387)||(349379-349524)
scaffold0003 (252-343)||(113392-113483)
scaffold0003 (253-345)||(113724-113816)
scaffold0003 (264-345)||(349084-349165)
[»] scaffold0072 (2 HSPs)
scaffold0072 (253-345)||(15806-15898)
scaffold0072 (274-345)||(15474-15545)
[»] scaffold0037 (3 HSPs)
scaffold0037 (252-380)||(45755-45893)
scaffold0037 (274-345)||(56494-56565)
scaffold0037 (274-345)||(63619-63690)
[»] scaffold0221 (2 HSPs)
scaffold0221 (257-345)||(8786-8874)
scaffold0221 (252-345)||(8428-8520)
[»] scaffold0032 (3 HSPs)
scaffold0032 (252-380)||(81857-81995)
scaffold0032 (265-345)||(90796-90876)
scaffold0032 (344-380)||(82171-82207)
[»] scaffold0340 (2 HSPs)
scaffold0340 (253-343)||(18633-18723)
scaffold0340 (265-380)||(18285-18410)
[»] scaffold0019 (2 HSPs)
scaffold0019 (255-380)||(50478-50613)
scaffold0019 (253-345)||(50834-50927)
[»] scaffold0182 (2 HSPs)
scaffold0182 (258-345)||(19713-19800)
scaffold0182 (256-345)||(20066-20155)
[»] scaffold0225 (2 HSPs)
scaffold0225 (252-346)||(9781-9875)
scaffold0225 (277-345)||(10914-10982)
[»] scaffold0246 (2 HSPs)
scaffold0246 (277-345)||(6353-6420)
scaffold0246 (299-345)||(6044-6090)
[»] scaffold0260 (1 HSPs)
scaffold0260 (292-345)||(14231-14283)
[»] scaffold0001 (2 HSPs)
scaffold0001 (274-334)||(144041-144101)
scaffold0001 (298-345)||(147198-147245)


Alignment Details
Target: chr2 (Bit Score: 163; Significance: 8e-87; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 19180866 - 19180656
Alignment:
Q  19 gtctcaagttaattaaagtttcttacaaaagcttccaatatttcaatcttagttacgaaaatgtgccacaaactcaataacaaccacgaagtctcaaata 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  19180866 gtctcaagttaattaaagtttcttacaaaagcttccaatatttcaatcttagttaccaaaatgtgccacaaactcaataacaaccacgaaatctcaaata 19180767  T
Q  119 aattgacatctagctaccattcaatttcaatctacattactagcttgtgga---aggtcttacgttactaaacaagtct---taatattgcatttaactt 212  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    ||||||||||||||||||||||||   |||||||||||| |||||    
T  19180766 aattgacatctagctaccattcaatttcaatatacattactagcttgtggagggtggtcttacgttactaaacaagtcttaataatattgcattgaactt 19180667  T
Q  213 tgtttatttta 223  Q
    |||||||||||    
T  19180666 tgtttatttta 19180656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 387 - 507
Target Start/End: Complemental strand, 19180011 - 19179891
Alignment:
Q  387 gtttttgcttgatttcagcgtccttttcaacatattgtttggtcttagcacaaatttacggcatgacatccacgcacaaatctacttcatacttatgttg 486  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19180011 gtttttgcttgatttcagcgtcgttttcaacatattgtttggtcttagcacaaatctacggcatgacatccacgcacaaatctacttcatacttatgttg 19179912  T
Q  487 ttcattatgttgaacaccaaa 507  Q
    |||||||||||||||||||||    
T  19179911 ttcattatgttgaacaccaaa 19179891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 256 - 378
Target Start/End: Original strand, 8173888 - 8174020
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ct 345  Q
    |||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||          ||    
T  8173888 ttaattacctttttggtcctctaactatttaattgatatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgttact 8173987  T
Q  346 acatttagtccttcctgttaattttattcaaat 378  Q
    ||||||||||||| |||||||||||||||||||    
T  8173988 acatttagtcctttctgttaattttattcaaat 8174020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 7495979 - 7496072
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7495979 aggcttaattacatttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 7496072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 13192987 - 13193080
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13192987 aggctaaattacttttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 13193080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 15405755 - 15405848
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15405755 aggcttaattacatttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcttctaagtttct 15405848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 252 - 387
Target Start/End: Original strand, 24138067 - 24138212
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    ||||| |||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||            
T  24138067 aggctaaattacctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtccactaagtttctcaccgt 24138166  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataagtgttag 387  Q
      ||||||||||||||| |||||| |||||||||||||| ||||||    
T  24138167 tactacatttagtcctttctgttagttttattcaaataaatgttag 24138212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 24371965 - 24372059
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||| |||||||| ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24371965 aaggcttaattacctttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 24372059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 254 - 380
Target Start/End: Original strand, 12860381 - 12860517
Alignment:
Q  254 gcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt---------- 343  Q
    |||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||              
T  12860381 gcttaattacatttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcaccgtta 12860480  T
Q  344 ctacatttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  12860481 ctacatttagtcctttctgttagttttattcaaataa 12860517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 258 - 380
Target Start/End: Original strand, 15744462 - 15744594
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctac 347  Q
    |||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||    
T  15744462 aattacctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctaactgttactac 15744561  T
Q  348 atttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||| |||||| ||||||||||||||    
T  15744562 atttagtcctttctgttagttttattcaaataa 15744594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 252 - 380
Target Start/End: Complemental strand, 7496430 - 7496292
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    |||||||||||| ||||| || ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||            
T  7496430 aggcttaattacatttttagtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctttaagtttctcaccgt 7496331  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||| |||||| ||||||||||||||    
T  7496330 tactacatttagtcctttctgttagttttattcaaataa 7496292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 256 - 380
Target Start/End: Original strand, 19815707 - 19815841
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ct 345  Q
    |||||||| |||||||| ||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||          ||    
T  19815707 ttaattacatttttggtcctctaactatttagttggtatcggattggttctctaactaaaaattgatttatttcggtcctctaagtttctcaccgttact 19815806  T
Q  346 acatttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||||| |||||| ||||||||||||||    
T  19815807 acatttagtcctttctgttagttttattcaaataa 19815841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 249 - 344
Target Start/End: Complemental strand, 19816158 - 19816063
Alignment:
Q  249 ttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc 344  Q
    |||||||| |||||| |||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19816158 ttaaggctaaattacctttttggtcctcaaactatttaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaagtttc 19816063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 253 - 380
Target Start/End: Complemental strand, 26182150 - 26182013
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    |||| |||||| |||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||             
T  26182150 ggctaaattacatttttggtcctttaattatttaattgatatcggattggtcctctaactaaaaattgatttatttcggccctctaagtttctcactgtt 26182051  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||| ||||||||||||||    
T  26182050 actacatttagtcctttctgttagttttattcaaataa 26182013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 38333128 - 38333038
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||  |||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38333128 cttaattatctttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 38333038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 13193439 - 13193346
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||  |||||||| ||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13193439 aggcttaattatatttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 13193346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 17032592 - 17032685
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||  |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17032592 aggctaaattatctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctcgaagtttct 17032685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 26181695 - 26181792
Alignment:
Q  248 tttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||||||| |||||||| |||||||||||||||||  || |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26181695 tttaaagcttaattacctttttggtcctctaactatttaattggaattggattggtccactaactaaaaattgatttatttcggtcctctaagtttct 26181792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 253 - 387
Target Start/End: Original strand, 38332704 - 38332848
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    |||| |||||| |||||||| ||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||             
T  38332704 ggctaaattacatttttggttctctaactatttaattggtattggattgatcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgtt 38332803  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataagtgttag 387  Q
     ||| ||||||||||| |||||| |||||||||||||| ||||||    
T  38332804 actatatttagtcctttctgttagttttattcaaataaatgttag 38332848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 15744897 - 15744805
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15744897 ggcttaattacatttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttattttggtcctctaagtttct 15744805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 247 - 380
Target Start/End: Complemental strand, 19847774 - 19847631
Alignment:
Q  247 atttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--- 343  Q
    ||||||||||||||||| ||||||||  |||||||||||| ||| ||| |||||||||||||||||||||||| ||||||||||||| |||||||||       
T  19847774 atttaaggcttaattacatttttggtcatctaactatttagttggtattggattggtcctctaactaaaaattaatttatttcggtcttctaagtttctc 19847675  T
Q  344 -------ctacatttagtccttcctgttaattttattcaaataa 380  Q
           ||||||||||||||| |||||| ||||||||||||||    
T  19847674 accgttactacatttagtcctttctgttagttttattcaaataa 19847631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 34735793 - 34735701
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| |||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  34735793 ggctaaattacatttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctttaagtttct 34735701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 248 - 339
Target Start/End: Original strand, 10991846 - 10991937
Alignment:
Q  248 tttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    ||||||||| |||||| |||||||| ||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  10991846 tttaaggctaaattacctttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttatttcggtcctctaa 10991937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 252 - 380
Target Start/End: Complemental strand, 33470374 - 33470236
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    |||||||||||| |||||||| ||||||||||||| ||| |||| ||||| |||||| ||||||||||||||||||||||||||||||||||            
T  33470374 aggcttaattacctttttggtcctctaactatttagttggtatcagattgatcctctgactaaaaattgatttatttcggtcctctaagtttctcactgt 33470275  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||| |||||| ||||||||||||||    
T  33470274 tactacatttagtcctttctgttagttttattcaaataa 33470236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 248 - 380
Target Start/End: Complemental strand, 41474537 - 41474395
Alignment:
Q  248 tttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt---- 343  Q
    |||| ||||||||||  |||||||| |||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||        
T  41474537 tttatggcttaattatctttttggtcctctaattatttaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctctgagtttctca 41474438  T
Q  344 ------ctacatttagtccttcctgttaattttattcaaataa 380  Q
          ||||||||||||||| |||||| ||||||||||||||    
T  41474437 ctgttactacatttagtcctttctgttagttttattcaaataa 41474395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 247 - 345
Target Start/End: Complemental strand, 24372423 - 24372325
Alignment:
Q  247 atttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| ||||| |||||| |||||||| ||||||||||||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  24372423 attttaggctaaattacatttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttattttggtcctctaagtttct 24372325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 253 - 380
Target Start/End: Original strand, 29472242 - 29472379
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    |||| |||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||| ||||||||| ||||||||||||||             
T  29472242 ggctcaattacctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaatagatttattttggtcctctaagtttctcaccgtt 29472341  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||| ||||||||||||||    
T  29472342 cctacatttagtcctttctgttagttttattcaaataa 29472379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 17050928 - 17051021
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||  |||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17050928 aggctaaattatctttttggtcctctaactatttaattggtattggattggtcctctaactaaaaattgatttatttcggtcctcgaagtttct 17051021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 256 - 345
Target Start/End: Complemental strand, 30898748 - 30898659
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  30898748 ttaattacatttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttgttcctctaagtttct 30898659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 8963267 - 8963175
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| ||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||  |||||||||    
T  8963267 ggctaaattacttttttggttctctaactatttaattggtatcggattggttctctaactaaaaattgatttattttggtcccttaagtttct 8963175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 15406205 - 15406114
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| |||||| | ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15406205 ggctaaattacctttttg-tcctctaactatttaattggtattggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 15406114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 249 - 345
Target Start/End: Original strand, 34735339 - 34735435
Alignment:
Q  249 ttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||| |  |||||||| ||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  34735339 ttaaggcttaataatctttttggtcctctaactatttagttggtatcgaattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 34735435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 7469171 - 7469258
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||||  ||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7469171 aattacctttttggccctctaactatttaattggtatcagattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 7469258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 16305024 - 16305117
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggatt-ggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16305024 aggctaaattacatttttg-tcctctaactatttaattggtatcggatttggtcctctaactaaaaattgatttatttcggtcctctaagtttct 16305117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 8444825 - 8444914
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| ||||||||  |||||||||||| ||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  8444825 ttaattacctttttggtcttctaactatttagttgatatcggattggttatctaactaaaaattaatttatttcggtcctctaagtttct 8444914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 16305463 - 16305383
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  16305463 tttttgatcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcaatcctctaagtttct 16305383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 256 - 380
Target Start/End: Complemental strand, 7469605 - 7469479
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct--acatttag 353  Q
    |||||||| |||||||| ||||||||||||| ||| |||| ||||||| ||||||||||||||||||||||||| ||| |||||||||||   | |||||    
T  7469605 ttaattacctttttggttctctaactatttagttggtatcagattggttctctaactaaaaattgatttatttcagtcgtctaagtttctcatcgtttag 7469506  T
Q  354 tccttcctgttaattttattcaaataa 380  Q
    || ||  ||||| ||||||||||||||    
T  7469505 tcatttatgttagttttattcaaataa 7469479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 252 - 380
Target Start/End: Complemental strand, 8174336 - 8174198
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa----------gt 341  Q
    ||||| |||||  |||||||| ||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| |||          ||    
T  8174336 aggctaaattatctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattaatttatttcggtcctttaaatttctcaccgt 8174237  T
Q  342 ttctacatttagtccttcctgttaattttattcaaataa 380  Q
    |||||||||||||| || |||||| ||||||||||||||    
T  8174236 ttctacatttagtcatttctgttagttttattcaaataa 8174198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 345
Target Start/End: Complemental strand, 17052499 - 17052412
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| | |||||| ||||||||||||||||| |||  |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17052499 aattacatgtttggtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttattttggtcctctaagtttct 17052412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 29472693 - 29472600
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| ||| |||||||| ||||||||||||||||| ||| |||||| ||||||||| |||||||||||||||| |||||||||| |||||    
T  29472693 aggcttaaatacctttttggtcctctaactatttaattggtattggattgatcctctaacaaaaaattgatttattttggtcctctaaatttct 29472600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 256 - 380
Target Start/End: Original strand, 2147888 - 2148023
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaact-aaaaattgatttatttcggtcctctaagttt----------c 344  Q
    |||||||| |||||||| ||||||||||||||||  |||| |||||||||||||||| ||||| ||||||||||||| |||||||||||          |    
T  2147888 ttaattacctttttggtcctctaactatttaattagtatcagattggtcctctaactaaaaaaatgatttatttcgggcctctaagtttctcaccgttac 2147987  T
Q  345 tacatttagtccttcctgttaattttattcaaataa 380  Q
    |||||||||||||| |||||| ||||||||||||||    
T  2147988 tacatttagtcctttctgttagttttattcaaataa 2148023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 41474087 - 41474174
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| ||||||||  |||||||||||||||| |||||||| |||||| ||| |||||||| |||||||||||||||||||||||||    
T  41474087 aattacatttttggtcttctaactatttaattggtatcggatcggtcctgtaattaaaaatttatttatttcggtcctctaagtttct 41474174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 42834452 - 42834514
Alignment:
Q  283 tttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42834452 tttaattggtatcggattggtcctctaactaaaaattgatttatttcggttctctaagtttct 42834514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 265 - 334
Target Start/End: Original strand, 8962372 - 8962441
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcc 334  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||    
T  8962372 tttttggtcctctaactatttaattagtatcagattggtcctctaactaaaaattgatttatttcggtcc 8962441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 2148312 - 2148244
Alignment:
Q  277 taactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||| |||||||||    
T  2148312 taactatttaattggtatcggattgatcctctaactaaaaattgatttattttggtcctttaagtttct 2148244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 24138957 - 24138865
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| ||||||||| |||||||||||||||| ||||  ||| || || ||| |||||||||||||||||||||| |||||||||||    
T  24138957 ggcttaattacctttttggtattctaactatttaattggtatcaaattagtactttaattaaaaattgatttatttcggtcttctaagtttct 24138865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 36713588 - 36713680
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| |||||| | ||||||||||||||||| |||||||||| || |||||||||||||||||||||||  ||||||||| |||||    
T  36713588 ggctaaattacctttttgatcctctaactatttaattggtatcggattgatcttctaactaaaaattgatttatttatgtcctctaaatttct 36713680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 8445234 - 8445149
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||| ||||| || ||||||||||||||||| ||||||||| |  |||||| |||||||||||||| |||||||||||||||||    
T  8445234 aattaccttttttgtcctctaactatttaattggtatcggattagcactctaattaaaaattgatttacttcggtcctctaagttt 8445149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 299 - 380
Target Start/End: Complemental strand, 12860771 - 12860680
Alignment:
Q  299 ttggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtccttcctgttaattttattcaaataa 380  Q
    |||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||| |||||| ||||||||||||||    
T  12860771 ttggtcctctaactaaaaattgatttatttcggtcctctaagtttttcaccgttactacatttagtcctttctgttagttttattcaaataa 12860680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 380
Target Start/End: Complemental strand, 10992255 - 10992164
Alignment:
Q  299 ttggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtccttcctgttaattttattcaaataa 380  Q
    |||||||||||| ||||||||||||||||||||||||||||||||          ||||||||||||||| |||||| ||||||||||||||    
T  10992255 ttggtcctctaattaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttagtcctttctgttagttttattcaaataa 10992164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 36714023 - 36713943
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| ||||||||||||||||| ||| | |||||||||| ||||||||||||||||||||  ||| |||| ||||||    
T  36714023 tttttggttctctaactatttaattggtattgaattggtcctcaaactaaaaattgatttattttcgtcatctaggtttct 36713943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 252
Target Start/End: Complemental strand, 19180241 - 19180204
Alignment:
Q  215 tttattttatcatgtactttatcatatcaaacatttaa 252  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19180241 tttattttatcatgtactttatcatatcaaacatttaa 19180204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 334
Target Start/End: Complemental strand, 23992267 - 23992211
Alignment:
Q  278 aactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcc 334  Q
    ||||||||||||  |||||| ||||||| |||||||||| ||||||||||| |||||    
T  23992267 aactatttaattagtatcggtttggtcccctaactaaaatttgatttattttggtcc 23992211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 2e-41; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 249 - 380
Target Start/End: Original strand, 6505533 - 6505674
Alignment:
Q  249 ttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----- 343  Q
    ||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  6505533 ttaaggcttaattacatttttgatcctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcac 6505632  T
Q  344 -----ctacatttagtccttcctgttaattttattcaaataa 380  Q
         ||||||||||||||| |||||| ||||||||||||||    
T  6505633 tgttactacatttagtcctttctgttagttttattcaaataa 6505674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 251 - 380
Target Start/End: Complemental strand, 25269452 - 25269313
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------- 343  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||           
T  25269452 aaggcttaattacttttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcggtcctctaagtttctcactg 25269353  T
Q  344 ---ctacatttagtccttcctgttaattttattcaaataa 380  Q
       ||||||||||||||| |||||| ||||||||||||||    
T  25269352 ttactacatttagtcctttctgttagttttattcaaataa 25269313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 253 - 387
Target Start/End: Original strand, 44991279 - 44991423
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||             
T  44991279 ggcttaattacctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgtt 44991378  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataagtgttag 387  Q
     |||||||||||| || |||||| |||||||||||||| ||||||    
T  44991379 actacatttagtcatttctgttagttttattcaaataaatgttag 44991423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 252 - 387
Target Start/End: Complemental strand, 624130 - 623985
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    ||||| |||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  624130 aggctaaattacatttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcattgt 624031  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataagtgttag 387  Q
      ||||||||||||||| |||||| |||||||||||||| ||||||    
T  624030 tactacatttagtcctttctgttagttttattcaaataaatgttag 623985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 15477643 - 15477737
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15477643 aaggcttaattacctttttggtcctctaactatttaattggtatcggattggtcctctaactaaacattgatttatttcggtcctctaagtttct 15477737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 249 - 380
Target Start/End: Original strand, 53750898 - 53751039
Alignment:
Q  249 ttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----- 343  Q
    |||| |||||||||| ||||| || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  53750898 ttaaagcttaattacctttttagtcctctaactattaaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcac 53750997  T
Q  344 -----ctacatttagtccttcctgttaattttattcaaataa 380  Q
         ||||||||||||||| |||||| ||||||||||||||    
T  53750998 tgttactacatttagtcctttctgttagttttattcaaataa 53751039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 246 - 380
Target Start/End: Original strand, 16037787 - 16037931
Alignment:
Q  246 catttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-- 343  Q
    ||||| |||||||||||| |||||||| ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||      
T  16037787 cattttaggcttaattacatttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttattttggtcctctaagtttct 16037886  T
Q  344 --------ctacatttagtccttcctgttaattttattcaaataa 380  Q
            ||||||||||||||| |||||| ||||||||||||||    
T  16037887 cactgttactacatttagtcctttctgttagttttattcaaataa 16037931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 251 - 380
Target Start/End: Original strand, 8591967 - 8592106
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------- 343  Q
    |||||| |||||| ||||| || ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  8591967 aaggctaaattacctttttagtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccg 8592066  T
Q  344 ---ctacatttagtccttcctgttaattttattcaaataa 380  Q
       ||||||||||||||| |||||| ||||||||||||||    
T  8592067 ttactacatttagtcctttctgttagttttattcaaataa 8592106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 8592419 - 8592327
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8592419 ggcttaattacatttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttct 8592327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 251 - 380
Target Start/End: Original strand, 14985329 - 14985468
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------- 343  Q
    |||||| |||||| |||||||| ||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||           
T  14985329 aaggctaaattacctttttggtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcacca 14985428  T
Q  344 ---ctacatttagtccttcctgttaattttattcaaataa 380  Q
       ||||||||||||||| |||||| ||||||||||||||    
T  14985429 ttactacatttagtcctttctgttagttttattcaaataa 14985468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 39448938 - 39448846
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| |||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  39448938 ggctaaattacctttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 39448846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 53751352 - 53751260
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  53751352 ggctaaattacctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 53751260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 252 - 343
Target Start/End: Original strand, 12817805 - 12817896
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    ||||| |||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12817805 aggctaaattacctttttggttctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctttaagttt 12817896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 20888148 - 20888235
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20888148 aattaccttttaggtactctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 20888235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 252 - 380
Target Start/End: Complemental strand, 24898640 - 24898502
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    |||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| | ||||||||||||            
T  24898640 aggcttaattactttttttgtcctctaactatttaattggtattggattggtcctctaactaaaaattgatttattttgatcctctaagtttctcaccgt 24898541  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||| |||||| ||||||||||||||    
T  24898540 tactacatttagtcctttctgttagttttattcaaataa 24898502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 253 - 344
Target Start/End: Complemental strand, 38339942 - 38339851
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc 344  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  38339942 ggcttaattacctttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcgatcctctaagtttc 38339851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 252 - 380
Target Start/End: Original strand, 42855338 - 42855476
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    |||| ||||||| |||||||| ||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||            
T  42855338 aggcgtaattacctttttggtcctctaactatttagttggtatcggagtggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgt 42855437  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||| |||||| ||||||||||||||    
T  42855438 tactacatttagtcctttctgttagttttattcaaataa 42855476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 265 - 380
Target Start/End: Complemental strand, 30683966 - 30683841
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc----------tacatttagt 354  Q
    |||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||    
T  30683966 tttttggtcctctaaatatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttcgcaccgttattacatttagt 30683867  T
Q  355 ccttcctgttaattttattcaaataa 380  Q
    |||| |||||| ||||||||||||||    
T  30683866 cctttctgttagttttattcaaataa 30683841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 43734284 - 43734378
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43734284 aaggtttaattacctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaatagatttatttcggtcctctaagtttct 43734378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 50769269 - 50769179
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  50769269 cttaattacctttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcgatcctctaagtttct 50769179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 255 - 345
Target Start/End: Original strand, 52557089 - 52557179
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||| |||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  52557089 cttaattacctttttggtcctctaactatttaattggtatcgaattggtcctctaactaaaaattgatttatttcggtcctataagtttct 52557179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 16038245 - 16038152
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||||| ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16038245 aggctaaattacctttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 16038152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 258 - 380
Target Start/End: Original strand, 24898194 - 24898326
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctac 347  Q
    |||||| |||||||| ||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||          ||||    
T  24898194 aattacatttttggtcctctaactatttaattggtatcggattgatcctctaattaaaaattgatttatttcggtcctctaagtttctcaccgttactac 24898293  T
Q  348 atttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||| |||||| ||||||||||||||    
T  24898294 atttagtcctttctgttagttttattcaaataa 24898326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 44957388 - 44957481
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||  |||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44957388 aggctaaattatatttttggtcctctaactattttattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 44957481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 53995386 - 53995293
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  53995386 aggctaaattacctttttggtcctctaactatttaattggtatcgcattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 53995293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 15478095 - 15478003
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| ||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15478095 ggctaaattacctttttggtcttctaactatttaattggtatcggattggtcctctaactaaaaattgattaatttcggtcctctaagtttct 15478003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 44957807 - 44957715
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| |||||||| ||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  44957807 ggcttaattacctttttggtcctctaactatttaattgatatcaaattggtcctttaactaaaaattgatttatttcgatcctctaagtttct 44957715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 249 - 345
Target Start/End: Original strand, 46849665 - 46849761
Alignment:
Q  249 ttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||| ||||| || ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  46849665 ttaaggcttaattacctttttcgtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcgatcctctaagtttct 46849761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 249 - 345
Target Start/End: Original strand, 50768817 - 50768913
Alignment:
Q  249 ttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||| |||||| | || |||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  50768817 ttaaggcttaattacctttttgatcctttaactatttaattggtatcgaattggtcatctaactaaaaattgatttatttcggtcctctaagtttct 50768913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 250 - 345
Target Start/End: Complemental strand, 19088794 - 19088699
Alignment:
Q  250 taaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||| |||||| |||||||| ||||||||||||||||| |||| ||||  |||||||||||||||||||||||||||||||||||||||||||    
T  19088794 taaggctaaattacctttttggtcctctaactatttaattggtatcagattaatcctctaactaaaaattgatttatttcggtcctctaagtttct 19088699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 264 - 380
Target Start/End: Complemental strand, 43734725 - 43734599
Alignment:
Q  264 ttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc----------tacatttag 353  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||          |||||||||    
T  43734725 ttttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctataagtttctcaccgttattacatttag 43734626  T
Q  354 tccttcctgttaattttattcaaataa 380  Q
    ||||| |||||| ||||||||||||||    
T  43734625 tcctttctgttagttttattcaaataa 43734599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 255 - 345
Target Start/End: Original strand, 43566380 - 43566470
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||  ||||||||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43566380 cttaattatctttttggtcttctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 43566470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 247 - 345
Target Start/End: Original strand, 53994928 - 53995026
Alignment:
Q  247 atttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| ||||||||||| |||||||| ||||||||||||| ||| |||| |||||||||| |||||||||||||||||||||||||||| |||||||||    
T  53994928 atttatggcttaattacctttttggtcctctaactatttagttggtatcagattggtcctttaactaaaaattgatttatttcggtcctttaagtttct 53995026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 55022282 - 55022376
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||| |||||||| ||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  55022282 aaggctaaattacctttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttatttcgatcctctaagtttct 55022376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 1433722 - 1433629
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||| |||||    
T  1433722 aggctaaattacatttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttattttggtcctctaattttct 1433629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 4513367 - 4513274
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||||| ||||||||||||| ||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  4513367 aggctaaattacctttttggtcctctaactatttagttggtatcggattgatcctctaactaaaaattaatttatttcggtcctctaagtttct 4513274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 6711962 - 6712055
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||  |||||||  ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6711962 aggctaaattatatttttggccctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 6712055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 21763632 - 21763539
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||||| ||||||||||||||||| |||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21763632 aggctaaattacatttttggtcctctaactatttaattggtataagattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 21763539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 23756255 - 23756158
Alignment:
Q  248 tttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||| | |||||| |||||||| ||||||||||||||||| ||||||||||||||| |||||||||||| |||||||| ||||||||||||||||    
T  23756255 tttaaggttaaattacatttttggtcctctaactatttaattggtatcggattggtcctttaactaaaaattaatttattttggtcctctaagtttct 23756158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 249 - 387
Target Start/End: Original strand, 25181808 - 25181956
Alignment:
Q  249 ttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc---- 344  Q
    ||||||||||||||| |||||||| ||||||||||||| ||  ||||||||||||||| ||||||||||||||||||||| |||| ||||||||||        
T  25181808 ttaaggcttaattacatttttggtcctctaactatttagtttgtatcggattggtcctttaactaaaaattgatttattttggtcttctaagtttctcac 25181907  T
Q  345 ------tacatttagtccttcctgttaattttattcaaataagtgttag 387  Q
          ||||||||||| || |||||| |||||||||||||| ||||||    
T  25181908 tgttattacatttagtcatttctgttagttttattcaaataaatgttag 25181956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 36122883 - 36122791
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36122883 aggctaaattacatttttgatcctctaactatttaattggtatcggattggtcctctaactaaaaattga-ttatttcggtcctctaagtttct 36122791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 44991729 - 44991636
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||  |||||||| ||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  44991729 aggctaaattatctttttggtcctctaactatttaattggtatcggattgatcctctaactgaaaattgatttatttcggtcctctaagtttct 44991636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 8398031 - 8398123
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| |||||||| |||||    
T  8398031 ggcttaattacctttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcgatcctctaactttct 8398123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 380
Target Start/End: Complemental strand, 14985783 - 14985644
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------- 343  Q
    ||||||||||||| |||||||| ||||||||||||||||  |||| |||||||| ||||||||||||||||||||||| | ||||||||||||           
T  14985783 aaggcttaattacctttttggtcctctaactatttaatttgtatcagattggtcatctaactaaaaattgatttattttgatcctctaagtttctcactg 14985684  T
Q  344 ---ctacatttagtccttcctgttaattttattcaaataa 380  Q
       ||||||||||||||| |||||| ||||||||||||||    
T  14985683 ttactacatttagtcctttctgttagttttattcaaataa 14985644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 38339492 - 38339584
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| |||||||| |||||||||||||| || |||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38339492 ggctgaattacctttttggtcctctaactatttaactggtatcagattggtcctctaactaaaaattgatttatttaggtcctctaagtttct 38339584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 53259576 - 53259496
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| ||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  53259576 tttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 53259496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 256 - 380
Target Start/End: Original strand, 19088344 - 19088478
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ct 345  Q
    |||||||  |||||||| ||||||||||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||||||||          ||    
T  19088344 ttaattatctttttggtcctctaactatttagttggtatcggaatgatcctctaactaaaaattgatttatttcggtcctctaagtttaataccgttact 19088443  T
Q  346 acatttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||||| |||||| ||||||||||||||    
T  19088444 acatttagtcctttctgttagttttattcaaataa 19088478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 254 - 345
Target Start/End: Original strand, 30683527 - 30683618
Alignment:
Q  254 gcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||| |||||||| ||||||||||||||||| |||| ||||| ||||| || ||||||||||||||||||||||||||||||||||    
T  30683527 gcttaattacctttttggtcctctaactatttaattggtatcagattgatcctccaattaaaaattgatttatttcggtcctctaagtttct 30683618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 266 - 345
Target Start/End: Complemental strand, 41752253 - 41752174
Alignment:
Q  266 ttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  41752253 ttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattcatttattttggtcctctaagtttct 41752174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 251 - 380
Target Start/End: Complemental strand, 6712413 - 6712276
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa---------gt 341  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||  |||||| ||||||||||| |||||||||||||||||||||||||         ||    
T  6712413 aaggcttaattacctttttggt-ctctaactatttaattggtaatggattgatcctctaactacaaattgatttatttcggtcctctaaattttcactgt 6712315  T
Q  342 ttctacatttagtccttcctgttaattttattcaaataa 380  Q
    | ||||||||||||||| |||||| ||||||||||||||    
T  6712314 tactacatttagtcctttctgttagttttattcaaataa 6712276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 12818258 - 12818164
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| |||  |||||||| |||||| |||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  12818258 aaggcttacttatctttttggtcctctaattatttaattggtatcggattggtgctctaactaaaacttgatttatttcggtcctctaagtttct 12818164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 247 - 345
Target Start/End: Complemental strand, 25182268 - 25182170
Alignment:
Q  247 atttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||| |||||  ||||||||  |||||||||||| ||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25182268 atttaaggctaaattatctttttggtcttctaactatttagttggtatcagattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 25182170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 253 - 343
Target Start/End: Complemental strand, 37206877 - 37206787
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||| |||||| ||||| || |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||    
T  37206877 ggctaaattaccttttttgttctctaactatttaattgatatcagattagtcctctaactaaaaattgatttatttcggttctctaagttt 37206787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 267 - 345
Target Start/End: Original strand, 39448502 - 39448580
Alignment:
Q  267 tttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  39448502 tttggtcctctaactatttaattggtatcgaattggtcctctaactaaaaattgatttatttcggtcctttaagtttct 39448580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 254 - 380
Target Start/End: Original strand, 1433272 - 1433408
Alignment:
Q  254 gcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc--------- 344  Q
    |||||||||  |||||||| |||||||||||| |||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||||             
T  1433272 gcttaattatctttttggtcctctaactatttcattggtattggattggtcctctaactaaaaattgatttattttggttctctaagtttctcatcgtta 1433371  T
Q  345 -tacatttagtccttcctgttaattttattcaaataa 380  Q
     |||||||||||||| |||||| ||||||||||||||    
T  1433372 ttacatttagtcctttctgttagttttattcaaataa 1433408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 41878309 - 41878216
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| ||||||||||||||| |||||||||| ||||||  ||| |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  41878309 aggctaaattacttttttggtcctctaactatataattggaatcagattagtcctctaactaaaaattgatttattgcggtcctctaagtttct 41878216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 44125921 - 44125828
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| ||||||||  |||||||||||||||| | ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  44125921 aggctaaattacatttttggtcatctaactatttaattggtgtcggattggtcttctaactaaaaattgatttattttggtcctctaagtttct 44125828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 47603812 - 47603719
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||||| ||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||  |||||||||    
T  47603812 aggctaaattacctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattaatttatttcggtcccttaagtttct 47603719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 19508413 - 19508504
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||||||| | | ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  19508413 ggcttaattacttttt-gatcctctaactatttaattggtatcggattggtcctctaactaacaattgatttatgtcggccctctaagtttct 19508504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 252 - 387
Target Start/End: Original strand, 41877859 - 41878003
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa---------gtt 342  Q
    ||||||| |||| ||||||||  ||||| |||||| ||| |||| |||||||| ||||||||||||||||||||||||||||||||||         |||    
T  41877859 aggcttagttacctttttggtcatctaattatttagttggtatcagattggtcatctaactaaaaattgatttatttcggtcctctaagttctcactgtt 41877958  T
Q  343 tctacatttagtccttcctgttaattttattcaaataagtgttag 387  Q
     ||||||||||||||| |||||| |||||||||||||| ||||||    
T  41877959 actacatttagtcctttctgttagttttattcaaataaatgttag 41878003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 21763180 - 21763263
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctc 336  Q
    ||||||||||  |||||||| |||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  21763180 ggcttaattatctttttggtcctctaattatttaattggtatcggattggtcctccaactaaaaattgatttatttcggtcctc 21763263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 253 - 380
Target Start/End: Original strand, 623679 - 623816
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    ||||||||||  |||||||| || |||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||| |||||||             
T  623679 ggcttaattatatttttggtcctttaactatttagttggtatcggattggtcctctaactaaaaattgttttattttggtcctataagtttcttaccgtt 623778  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||| ||||||||||||||    
T  623779 actacatttagtcctttctgttagttttattcaaataa 623816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 265 - 380
Target Start/End: Complemental strand, 46850107 - 46849982
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 354  Q
    ||||||||  |||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||          |||||||||||    
T  46850107 tttttggtcatctaactattaaattggtatcagattagtcctctaactaaaaattgatttatttcggtcctctaagtttatcaccgttactacatttagt 46850008  T
Q  355 ccttcctgttaattttattcaaataa 380  Q
    |||| |||||| ||||||||||||||    
T  46850007 cctttctgttagttttattcaaataa 46849982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 265 - 380
Target Start/End: Complemental strand, 52557525 - 52557400
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa----------gtttctacatttagt 354  Q
    |||||||| ||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||||||||          ||| |||||||||||    
T  52557525 tttttggtcctctaactatttaattggtatcagattggtcttctaactaaaaattgatttattttggtcctctaaatttctcaccgttactacatttagt 52557426  T
Q  355 ccttcctgttaattttattcaaataa 380  Q
    |||| |||||| ||||||||||||||    
T  52557425 cctttctgttagttttattcaaataa 52557400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 42855790 - 42855697
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| ||||| ||  | |||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42855790 aggctaaattacctttttagtcatttaactatttaattagtatcggattggtcctccaactaaaaattgatttatttcggtcctctaagtttct 42855697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 47602942 - 47603035
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||  |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||  |||||||||    
T  47602942 aggctaaattatctttttggtcctctaactatttaattggtatcggattggtcctctaattaaaaattgatttattttggtcccttaagtttct 47603035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 256 - 345
Target Start/End: Complemental strand, 49136084 - 49135995
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||  |  |||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  49136084 ttaattactttttttatcgtctaactatttaattggtatcagattgatcctctaactaaaaattgatttatttcggtcctttaagtttct 49135995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 23755418 - 23755510
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||  || || || ||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  23755418 ggcttaattaacttattcgtcctctaactatttaattggtattggattggtcctctaactaaaaattaatttatttcggttctctaagtttct 23755510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 33091453 - 33091545
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| |||||||| |||||||||||||||   |||  |||||||||||||||||||||||||||||||| | ||||||||||||||    
T  33091453 ggcttaattacctttttggtcctctaactatttaatcagtattagattggtcctctaactaaaaattgatttattttgatcctctaagtttct 33091545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 255 - 343
Target Start/End: Original strand, 36122435 - 36122523
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    ||||||||| |||||||| |||| |||||||||||| |||| ||||||||||||||||||||||||||||||||  ||| |||||||||    
T  36122435 cttaattacctttttggtcctctgactatttaattggtatcagattggtcctctaactaaaaattgatttatttttgtcatctaagttt 36122523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 52692036 - 52692116
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| | ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  52692036 tttttgatcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcccttaagtttct 52692116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 251 - 387
Target Start/End: Original strand, 41751816 - 41751960
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------- 343  Q
    ||||||||||||| |||||| | || |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| || |||||||           
T  41751816 aaggcttaattacctttttg-tcctttaactatttaattggtatcggattggtcctctaactaaaaattgatttattttggt-ctttaagtttctcactg 41751913  T
Q  344 ---ctacatttagtccttcctgttaattttattcaaataagtgttag 387  Q
       |||||||||||| || |||||| |||||||||||||| ||||||    
T  41751914 ttactacatttagtctttactgttagttttattcaaataaatgttag 41751960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 380
Target Start/End: Complemental strand, 19508831 - 19508726
Alignment:
Q  285 taattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtccttcctgttaattttattc 374  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||          ||||||||||||||| |||||| ||||||||    
T  19508831 taattgatatcagattggtcctctaactaaaaattgatttatttcggtcctccaagtttctcacccttactacatttagtcctttctgttagttttattc 19508732  T
Q  375 aaataa 380  Q
    ||||||    
T  19508731 aaataa 19508726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 341
Target Start/End: Original strand, 31214160 - 31214250
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagt 341  Q
    |||||| |||||| |||||| |  |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||| ||||    
T  31214160 aaggctaaattacatttttgatcatctaactatttaattggtatcagattggtcctctaactaaaaattaatttatttcggtcctcaaagt 31214250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 345
Target Start/End: Complemental strand, 33091898 - 33091811
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| ||||| || ||||||||||||||||  |||  ||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  33091898 aattacatttttagtcctctaactatttaattagtattagattggtcctctaactaaaaattgatttatttcagtcatctaagtttct 33091811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 252 - 343
Target Start/End: Complemental strand, 50508908 - 50508817
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    ||||| |||||  ||||||||  ||||| |||||||||| |||| |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  50508908 aggctaaattatctttttggttttctaattatttaattggtatcagattggtcatctaactaaaaattgatttattttggtcctctaagttt 50508817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 52692889 - 52692798
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| |||||||| || || ||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||  |||||||||    
T  52692889 ggctaaattacctttttggtcctttagctatttaattgctatcg-attggtcctctaactaaaaattgatttattttggtcccttaagtttct 52692798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 380
Target Start/End: Original strand, 37206428 - 37206564
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    ||||||||||| |||| | | ||||||||||| | |||||||| ||||  |||||||  ||||||||||||||||||||||||||||||||             
T  37206428 ggcttaattacctttt-gatcctctaactattcagttgatatcagattaatcctctagttaaaaattgatttatttcggtcctctaagtttttcactgtt 37206526  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||| ||||||||||||||    
T  37206527 actacatttagtcctttctgttagttttattcaaataa 37206564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 274 - 339
Target Start/End: Complemental strand, 55022489 - 55022424
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    ||||||||||||||||| |||||||||  |||||||| ||||||||||||||||||| ||||||||    
T  55022489 ctctaactatttaattggtatcggattaatcctctaattaaaaattgatttatttcgatcctctaa 55022424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 387 - 450
Target Start/End: Complemental strand, 757816 - 757753
Alignment:
Q  387 gtttttgcttgatttcagcgtccttttcaacatattgtttggtcttagcacaaatttacggcat 450  Q
    |||||||||||||||||| ||  ||||| |||||||||||||||||||||||||| ||||||||    
T  757816 gtttttgcttgatttcagtgttgttttctacatattgtttggtcttagcacaaatctacggcat 757753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 345
Target Start/End: Original strand, 44125624 - 44125714
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||  |||||||| || |||||||||||||| |||   |||||| |||||||||||||||||||| |||||||  |||||||||||    
T  44125624 cttaattatctttttggtcctttaactatttaattggtattaaattggttctctaactaaaaattgatttttttcggttttctaagtttct 44125714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 758247 - 758049
Alignment:
Q  19 gtctcaagttaattaaagtttcttacaaaagcttccaatatttcaatcttagttacgaaaatgtgccacaaactcaataacaaccacgaagtctcaaata 118  Q
    ||||||||||||||||||||||||||||||| |||||   ||||||| |||| ||| ||||||||||  ||| | || |  ||      | | |||||||    
T  758247 gtctcaagttaattaaagtttcttacaaaagattcca---tttcaattttaggtaccaaaatgtgccctaaatttaaaagtaa------aatttcaaata 758157  T
Q  119 aattgacatct-agctacc-----attcaatttcaatctacattactagcttgtggaaggtct--------tacgttactaaacaagtcttaatattgca 204  Q
    ||||||||||| |||||||     ||||||||||||||||||||| |||||||||||||| ||        |  ||||||||||||||||||||||||||    
T  758156 aattgacatcttagctaccctaccattcaatttcaatctacattaatagcttgtggaaggccttttaagtctgagttactaaacaagtcttaatattgca 758057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 43566789 - 43566736
Alignment:
Q  292 tatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  43566789 tatcggattggtcctctaactaaaaattgatttatttcagtcttttaagtttct 43566736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 53259184 - 53259230
Alignment:
Q  299 ttggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  53259184 ttggtcctctaactaaaaattaattaatttcggtcctctaagtttct 53259230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 345
Target Start/End: Original strand, 50508512 - 50508549
Alignment:
Q  308 taactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||||||||||||||||||| |||||||||    
T  50508512 taactaaaaattgatttatttcggtcctttaagtttct 50508549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 298
Target Start/End: Complemental strand, 31214293 - 31214250
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcgga 298  Q
    ||||||||| |||||| | |||||||||||||||||||||||||    
T  31214293 cttaattacctttttgattctctaactatttaattgatatcgga 31214250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 758028 - 757970
Alignment:
Q  194 ttaatattgcatttaactttgtttattttatcatgtactttatcatatcaaacatttaa 252  Q
    ||||| ||||||| |||||||||||| | || |||||||| ||||||| ||||||||||    
T  758028 ttaatgttgcattgaactttgtttatatcattatgtacttaatcatatgaaacatttaa 757970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 3e-40; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 1762674 - 1762766
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1762674 ggcttaattacttttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 1762766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 250 - 345
Target Start/End: Complemental strand, 16024350 - 16024255
Alignment:
Q  250 taaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16024350 taaggcttaattacttttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 16024255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 16023897 - 16023989
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16023897 ggctaaattacttttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 16023989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 254 - 387
Target Start/End: Complemental strand, 44323109 - 44322966
Alignment:
Q  254 gcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt---------- 343  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||              
T  44323109 gcttaattacctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgtta 44323010  T
Q  344 ctacatttagtccttcctgttaattttattcaaataagtgttag 387  Q
    |||||||||||| || |||||| |||||||||||||| ||||||    
T  44323009 ctacatttagtcatttctgttagttttattcaaataaatgttag 44322966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 248 - 380
Target Start/End: Original strand, 12127052 - 12127194
Alignment:
Q  248 tttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa-------- 339  Q
    |||||||||||||||| |||||||| ||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||            
T  12127052 tttaaggcttaattacctttttggtcctctaactatttagttggtatcggattggttctctaactaaaaattgatttatttcggtcctctaagtttctca 12127151  T
Q  340 --gtttctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||||||| |||||| ||||||||||||||    
T  12127152 ccgtttctacatttagtcctttctgttagttttattcaaataa 12127194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 246 - 345
Target Start/End: Complemental strand, 23476798 - 23476699
Alignment:
Q  246 catttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| |||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23476798 cattaaaggctaaattacatttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 23476699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 256 - 380
Target Start/End: Original strand, 49643674 - 49643808
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ct 345  Q
    |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||          ||    
T  49643674 ttaattacatttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcactgttact 49643773  T
Q  346 acatttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||||| |||||| ||||||||||||||    
T  49643774 acatttagtcctttctgttagttttattcaaataa 49643808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 243 - 380
Target Start/End: Complemental strand, 12481519 - 12481372
Alignment:
Q  243 aaacatttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtt 342  Q
    ||||| || ||||| |||||| |||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12481519 aaacaatttaggctaaattacctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtt 12481420  T
Q  343 t----------ctacatttagtccttcctgttaattttattcaaataa 380  Q
    |          ||||||||||||||| |||||| ||||||||||||||    
T  12481419 tctcactgttactacatttagtcctttctgttagttttattcaaataa 12481372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 251 - 380
Target Start/End: Complemental strand, 45053141 - 45053002
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------- 343  Q
    |||||| ||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||           
T  45053141 aaggctaaattacttttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcatctaagtttctcagtg 45053042  T
Q  344 ---ctacatttagtccttcctgttaattttattcaaataa 380  Q
       ||||||||||||||| |||||| ||||||||||||||    
T  45053041 ttactacatttagtcctttctgttagttttattcaaataa 45053002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 250 - 345
Target Start/End: Complemental strand, 8762852 - 8762757
Alignment:
Q  250 taaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||| |||||| ||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8762852 taaggctaaattacatttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 8762757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 253 - 380
Target Start/End: Original strand, 23476341 - 23476478
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    |||||||||||||||||||| ||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||| ||||||||             
T  23476341 ggcttaattacttttttggtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttatttcggtccactaagtttctcaccgtt 23476440  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||| ||||||||||||||    
T  23476441 actacatttagtcctttctgttagttttattcaaataa 23476478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 247 - 345
Target Start/End: Complemental strand, 46593686 - 46593589
Alignment:
Q  247 atttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  46593686 attttaggctaaattacttttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcct-taagtttct 46593589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 254 - 380
Target Start/End: Original strand, 12481060 - 12481196
Alignment:
Q  254 gcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt---------- 343  Q
    |||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||              
T  12481060 gcttaattacatttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcaccgtta 12481159  T
Q  344 ctacatttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  12481160 ctacatttagtcctttctgttagttttattcaaataa 12481196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 20306005 - 20306093
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc 344  Q
    |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20306005 ttaattacctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggttctctaagtttc 20306093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 27547669 - 27547761
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| ||||||||  | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27547669 ggcttaattacctttttggtcttttaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 27547761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 1763126 - 1763032
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||| |||||||| ||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1763126 aaggctaaattacctttttggtcctctaactatttaattggtatcaaattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 1763032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 255 - 345
Target Start/End: Original strand, 6797809 - 6797899
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||    
T  6797809 cttaattacttttttggttctctaactatttaattgatatcagattgatcttctaattaaaaattgatttatttcggtcctctaagtttct 6797899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 253 - 380
Target Start/End: Complemental strand, 31704063 - 31703926
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    ||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| || ||| |||||||             
T  31704063 ggcttaattacatttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggacctataagtttctcactgtt 31703964  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||||||||||||||||||    
T  31703963 actacatttagtcctttctgttaattttattcaaataa 31703926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 49140141 - 49140235
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||  |||||||| ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49140141 aaggcttaattatctttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 49140235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 26707195 - 26707288
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| ||| |||||||| ||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26707195 aggcttaaatacctttttggtcctctaactatttaattggtatcagatcggtcctctaactaaaaattgatttatttcggtcctctaagtttct 26707288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 35612527 - 35612442
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35612527 aattacctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcagtcctctaagttt 35612442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 37304027 - 37304120
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37304027 aggctaaattacctttttggtcctctaaccatttaattggtatcggattggtcctctaactaaaaattgatttatttcagtcctctaagtttct 37304120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 38000492 - 38000581
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  38000492 ttaattacctttttggtcctctaactatttaattggtatcggattggtcttctaattaaaaattgatttatttcggtcctctaagtttct 38000581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 254 - 343
Target Start/End: Original strand, 38127710 - 38127799
Alignment:
Q  254 gcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||||||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38127710 gcttaattacctttttggttctctaactatttaattggtttcggattggtcatctaactaaaaattgatttatttcggtcctctaagttt 38127799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 27548119 - 27548027
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| ||||| || ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27548119 ggctaaattaccttttttgtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 27548027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 37576631 - 37576539
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37576631 ggcttaattacctttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcggttctctaagtttct 37576539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 250 - 345
Target Start/End: Original strand, 3089339 - 3089434
Alignment:
Q  250 taaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||| |||||| |||| ||| |||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3089339 taaggctaaattaccttttgggtcctctaactatttaattggcatcggattggtactctaactaaaaattgatttatttcggtcctctaagtttct 3089434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 252 - 343
Target Start/End: Original strand, 8760271 - 8760362
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| ||||||||||||    
T  8760271 aggcttaattacctttttggtcctctaactatttaattggtatcggattgaccctctaactaaaaattgatttatttcgatcctctaagttt 8760362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 2064662 - 2064569
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||| | ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  2064662 aggctaaattacatttttgatcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcggttctctaagtttct 2064569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 34967173 - 34967080
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  34967173 aggctaaattacatttttgattctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtccattaagtttct 34967080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 264 - 345
Target Start/End: Original strand, 37284739 - 37284820
Alignment:
Q  264 ttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||    
T  37284739 ttttttggtcctctaactatttaattgatatcggattggttctctaactaaaaattgatttatttcggtcatttaagtttct 37284820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 258 - 345
Target Start/End: Complemental strand, 10832031 - 10831944
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||| |||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||  |||||||||    
T  10832031 aattacttttttggtcctctaactatttaactggtattggattggtcctctaactaaaaattgatttatttcggtcccttaagtttct 10831944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 258 - 345
Target Start/End: Complemental strand, 37304473 - 37304386
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| ||||||||  ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  37304473 aattatttttttggccctctaactatttaattggtatcggattgatcctataactaaaaattgatttatttcggtcctctaagtttct 37304386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 258 - 345
Target Start/End: Complemental strand, 45843562 - 45843475
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||||| ||||||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45843562 aattacatttttggtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttatttcgatcctctaagtttct 45843475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 252 - 380
Target Start/End: Complemental strand, 49644121 - 49643983
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    ||||| |||||  |||||||| ||||||||||||||||| |||| |||||||||||||| |||||||||||||| |||||||||||||||||            
T  49644121 aggctaaattatctttttggtcctctaactatttaattggtatcagattggtcctctaattaaaaattgatttaattcggtcctctaagtttccatccat 49644022  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||| |||||| ||||||||||||||    
T  49644021 tactacatttagtcctttctgttagttttattcaaataa 49643983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 4696880 - 4696974
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||  ||||| || ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  4696880 aaggctaaattatctttttagtcctctaactatttaattggtatcggattggtcctataactaaaaattgatttattttggtcctctaagtttct 4696974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 249 - 380
Target Start/End: Original strand, 25995780 - 25995921
Alignment:
Q  249 ttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----- 343  Q
    |||||| | |||||| |||||||| ||||||||||||||||| |||| |||||||||| ||| |||||||||||||||||||||||| |||||||         
T  25995780 ttaaggataaattacctttttggtcctctaactatttaattggtatcagattggtcctttaattaaaaattgatttatttcggtcctttaagtttctcac 25995879  T
Q  344 -----ctacatttagtccttcctgttaattttattcaaataa 380  Q
         ||||||||||||||| |||||| ||||||||||||||    
T  25995880 tgttactacatttagtcctttctgttagttttattcaaataa 25995921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 251 - 332
Target Start/End: Original strand, 10831129 - 10831210
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggt 332  Q
    |||||| |||||| |||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  10831129 aaggctaaattacctttttggtcctctaactatttaattggtatcgaattggtcctctaactaaaaattgatttatttcggt 10831210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 23598071 - 23598164
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||  |||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  23598071 aggctaaattatctttttggtcctctaactatttaattggtatcgaattggtcctctaactaaaaattgatttatttcagtcctctaaatttct 23598164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 35612085 - 35612174
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| |||||||| |||||| |||||||||| |||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  35612085 ttaattacctttttggtcctctaagtatttaattggtatcggattgatcctctaactaaaaattgatttattttgttcctctaagtttct 35612174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 37585696 - 37585785
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||||| ||||||||||||||||| |||  ||||| |||||||||||||||||||||||||||| |||||||| |||||    
T  37585696 ttaattacttttttggtcctctaactatttaattggtattagattgatcctctaactaaaaattgatttatttcgatcctctaaatttct 37585785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 251 - 343
Target Start/End: Original strand, 9006189 - 9006281
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||| |||||||  |||||||| ||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||| |||||||||    
T  9006189 aaggtttaattatctttttggtcctctaactatttaattggtatcggattgatcctttaactaaaaattgatttatttcggtcatctaagttt 9006281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 39486214 - 39486294
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| | |||||||||    
T  39486214 tttttggttctctaactatttaattggtattggattggtcctctaactaaaaattgatttatttcggtcgtttaagtttct 39486294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 252 - 339
Target Start/End: Original strand, 32047742 - 32047829
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    |||||||||||| |||||||| ||||||||||||||||| || ||| ||||||||||||||||||| |||||||||| ||||||||||    
T  32047742 aggcttaattacctttttggtcctctaactatttaattggtaacggtttggtcctctaactaaaaaatgatttattttggtcctctaa 32047829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 13109277 - 13109191
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    |||| |||||| ||||| || ||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||    
T  13109277 ggctaaattacctttttagtcctctaactatttaattggtatccgattagtcctctaactaaaaattgatttatttcggtcctctaa 13109191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 253 - 339
Target Start/End: Original strand, 37576181 - 37576267
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    |||| |||||| |||||||| || |||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37576181 ggctaaattacctttttggtcctttaactattaaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaa 37576267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 265 - 334
Target Start/End: Complemental strand, 5537242 - 5537173
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcc 334  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  5537242 tttttggtcctctaactatttaatcggtatcggattggtcctctaactaaaaattgatttatttcggtcc 5537173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 252 - 380
Target Start/End: Complemental strand, 9006641 - 9006504
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    ||||| |||||  ||||||||  |||||||||||||| | ||||||||||||||||||||||||||||||||||||| | ||||| ||||||            
T  9006641 aggctaaattatctttttggtcttctaactatttaatcgttatcggattggtcctctaactaaaaattgatttatttggatcctccaagtttctcacctt 9006542  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||| ||||||||||||||    
T  9006541 actacatttagtcctttctgttagttttattcaaataa 9006504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 26723252 - 26723159
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||| | ||||||||||||||||| |||| ||||| || ||||||||||||||||||||||| ||||||||||||||||    
T  26723252 aggctaaattacctttttgatcctctaactatttaattggtatcagattgatcatctaactaaaaattgatttattttggtcctctaagtttct 26723159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 6798245 - 6798165
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| |||||    
T  6798245 tttttggtcttctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcgatcctctaaatttct 6798165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 255 - 339
Target Start/End: Complemental strand, 32048630 - 32048546
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    |||||||||||||||||| ||||||||||||| |||||| ||| ||||||||||||||||||| ||||||||||  |||||||||    
T  32048630 cttaattacttttttggtcctctaactatttatttgataacggtttggtcctctaactaaaaaatgatttatttttgtcctctaa 32048546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 37467670 - 37467578
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| ||||||||  |||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||  |||||||||    
T  37467670 ggctaaattacctttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattaatttatttaggtcccttaagtttct 37467578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 258 - 345
Target Start/End: Complemental strand, 4330282 - 4330195
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| ||||| || |||||| |||||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  4330282 aattaccttttttgtcctctaattatttaattggtatcggattaaccctctaactaaaaattgatttatttcggtcctctaagtttct 4330195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 34966308 - 34966395
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||||  ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||  |||||||||    
T  34966308 aattacctttttggacctctaactatttaattggtatcggattggtcctctaactaaaacttgatttatttcagtcccttaagtttct 34966395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 380
Target Start/End: Complemental strand, 49140580 - 49140456
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 354  Q
    |||||||| ||||||||||||||||| |||| |||| ||||||||||| |||||||||||||||||||||| |||||||          |||||||||||    
T  49140580 tttttggtcctctaactatttaattggtatcagattagtcctctaact-aaaattgatttatttcggtcctataagtttctcactgttactacatttagt 49140482  T
Q  355 ccttcctgttaattttattcaaataa 380  Q
    |||| |||||| ||||||||||||||    
T  49140481 cctttctgttagttttattcaaataa 49140456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 45052689 - 45052782
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||  |||||| |  || ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  45052689 aggcttaattatctttttgatcttcaaactatttaattggtatcagattgatcctctaactaaaaattgatttatttcggtcctataagtttct 45052782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 37285177 - 37285085
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| |||||||| || |||||||||||||| |||  |||||||||||||||||||||||||||||||||| | |||||| |||||    
T  37285177 ggctaaattacatttttggtcctttaactatttaattggtattagattggtcctctaactaaaaattgatttatttcgattctctaaatttct 37285085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 4697222 - 4697163
Alignment:
Q  280 ctatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  4697222 ctatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaa 4697163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 46592817 - 46592904
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||||  |||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| |||  |||||||||    
T  46592817 aattacctttttggccctctaactatttaattgatatcagattgatcctctaactaaaaaatgatttatttcgatcccttaagtttct 46592904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 253 - 339
Target Start/End: Original strand, 13183766 - 13183852
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    |||| |||||| |||||| | ||||||||||||||||| ||| | ||| ||| ||||||||||||||||||||||||||||||||||    
T  13183766 ggctaaattacctttttgatcctctaactatttaattggtattgaattagtcttctaactaaaaattgatttatttcggtcctctaa 13183852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 20306454 - 20306360
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||| | |||||| ||||||||| ||||||| |||| ||||| ||||| ||||||| |||||||||||| |||||| |||||||||    
T  20306454 aaggcttaattacctctttggtcctctaactagttaattggtatcagattgatcctccaactaaagattgatttattttggtcctttaagtttct 20306360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 5536397 - 5536478
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtc 333  Q
    ||||| |||||| |||||||  ||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||    
T  5536397 aggctaaattacatttttggccctctaactatttaattggtatcggattggtcctctacctaaaatttgatttatttgggtc 5536478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 12127485 - 12127411
Alignment:
Q  274 ctctaactatttaattgatatcggattggt---cctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||||| ||||||||| ||   ||||||| ||||||||||||||||||||||||||||||||||    
T  12127485 ctctaactatttaattggtatcggattagttctcctctaattaaaaattgatttatttcggtcctctaagtttct 12127411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 247 - 339
Target Start/End: Original strand, 28884011 - 28884103
Alignment:
Q  247 atttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    |||| ||| |||||||| |||||||| |||||| |||||||||| || ||| ||||||||||||||||||| | |||||||| ||||||||||    
T  28884011 attttaggtttaattacctttttggtcctctaattatttaattggtaacggtttggtcctctaactaaaaaataatttattttggtcctctaa 28884103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 255 - 339
Target Start/End: Complemental strand, 28884871 - 28884787
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    ||||||| |||||||||| ||||||||||||||||| |  ||| ||||||||||||||||||| ||||||||||  |||||||||    
T  28884871 cttaattgcttttttggtcctctaactatttaattggttacggtttggtcctctaactaaaaaatgatttattttagtcctctaa 28884787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 250 - 343
Target Start/End: Complemental strand, 39486645 - 39486552
Alignment:
Q  250 taaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||| |||||||||||||  |  |||||||||||||||| ||| | |||| ||||||||||||||||||||||||||| ||  |||||||||    
T  39486645 taaggcataattacttttttaatcatctaactatttaattggtattgaattgttcctctaactaaaaattgatttatttccgttttctaagttt 39486552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 380
Target Start/End: Original strand, 31703660 - 31703751
Alignment:
Q  299 ttggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||||||||||||||||||||||||||||| |||||||          ||||||||||||||| |||||| ||||||||||||||    
T  31703660 ttggtcctctaactaaaaattgatttatttcggtcctttaagtttctcaccgttactacatttagtcctttctgttagttttattcaaataa 31703751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 37586121 - 37586053
Alignment:
Q  275 tctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||||| ||||||| |||||||||| |||||||| |||||||| ||||||||||||| |||||||||    
T  37586121 tctaactacttaattggtatcggattgatcctctaattaaaaattaatttatttcggtcttctaagttt 37586053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 46289327 - 46289397
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttat 326  Q
    |||||||  |||||| | ||||||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  46289327 ttaattatctttttgatcctctaactatttaattggtatcagattggtcatctaactaaaaattgatttat 46289397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 281 - 333
Target Start/End: Complemental strand, 49838808 - 49838756
Alignment:
Q  281 tatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtc 333  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||||||    
T  49838808 tatttaattggtatcagattggtcttctaactaaaaattgatttatttcggtc 49838756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 49837417 - 49837463
Alignment:
Q  299 ttggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||    
T  49837417 ttggtcctctaactaaaaattgatttatttcggtcccttaagtttct 49837463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 334
Target Start/End: Original strand, 37466800 - 37466883
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcc 334  Q
    |||||| |||||| |||||  | ||||||  ||||||||| |||||||||  | ||||||||||||||||||||||||| ||||    
T  37466800 aaggctaaattacattttttattctctaatcatttaattggtatcggattactgctctaactaaaaattgatttatttccgtcc 37466883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 317
Target Start/End: Complemental strand, 52179434 - 52179365
Alignment:
Q  248 tttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaa 317  Q
    ||||||| |||| | |||||||||| |  |||||||||||||| |||||  |||||||| ||||||||||    
T  52179434 tttaaggtttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcctttaactaaaaa 52179365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 84; Significance: 1e-39; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 252 - 380
Target Start/End: Complemental strand, 22604 - 22466
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  22604 aggcttaattacctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcactat 22505  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||| |||||| ||||||||||||||    
T  22504 tactacatttagtcctttctgttagttttattcaaataa 22466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 249 - 345
Target Start/End: Original strand, 21508 - 21604
Alignment:
Q  249 ttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||| |||||||| ||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21508 ttaaggcttaattacctttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 21604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 4e-39; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 250 - 393
Target Start/End: Original strand, 6356762 - 6356915
Alignment:
Q  250 taaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------ 343  Q
    ||||||| |||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||          
T  6356762 taaggctaaattacctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttttcacc 6356861  T
Q  344 ----ctacatttagtccttcctgttaattttattcaaataagtgttagtttttg 393  Q
        ||||||||||||||| |||||| |||||||||||||| ||||||| ||||    
T  6356862 gttactacatttagtcctttctgttagttttattcaaataaatgttagtgtttg 6356915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 251 - 380
Target Start/End: Complemental strand, 6356737 - 6356598
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------- 343  Q
    ||||||||||||| |||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  6356737 aaggcttaattacctttttggtcctataactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcactg 6356638  T
Q  344 ---ctacatttagtccttcctgttaattttattcaaataa 380  Q
       ||||||||||||||| |||||| ||||||||||||||    
T  6356637 ttactacatttagtcctttctgttagttttattcaaataa 6356598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 7578872 - 7578964
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7578872 ggcttaattacttttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 7578964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 250 - 380
Target Start/End: Original strand, 21391187 - 21391327
Alignment:
Q  250 taaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------ 343  Q
    |||||||||||||| |||||||| ||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||          
T  21391187 taaggcttaattacctttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttatttcggtcctctaagtttctcacc 21391286  T
Q  344 ----ctacatttagtccttcctgttaattttattcaaataa 380  Q
        |||||||||||| || |||||||||||||||||||||    
T  21391287 gctactacatttagtcttttctgttaattttattcaaataa 21391327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 252 - 380
Target Start/End: Original strand, 10526310 - 10526448
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    ||||| |||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||            
T  10526310 aggctaaattacctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgt 10526409  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||| |||||| ||||||||||||||    
T  10526410 tactacatttagtcctttctgttagttttattcaaataa 10526448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 253 - 393
Target Start/End: Complemental strand, 21391640 - 21391490
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    |||| |||||| ||||||||  |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||             
T  21391640 ggctaaattacatttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattaatttatttcggtcctctaagtttctcactctt 21391541  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataagtgttagtttttg 393  Q
     ||||||||||||||| |||||| |||||||||||||| ||||||| ||||    
T  21391540 actacatttagtcctttctgttagttttattcaaataaatgttagtgtttg 21391490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 33716593 - 33716680
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33716593 aattagttttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 33716680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 10526761 - 10526668
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||  ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10526761 aggcttaattatcttttttgtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 10526668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 1114495 - 1114403
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1114495 ggcttaattacatttttggtcctctaactatttagttgttatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttct 1114403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 17749935 - 17750027
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  17749935 ggcttaattacctttttggtcctctaactatttaattgatatcagattggttctctaactaaaaattaatttatttcggtcctctaagtttct 17750027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 35146699 - 35146791
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| |||||||| ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35146699 ggcttaattacctttttggtcctctaactatttagttagtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 35146791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 41453005 - 41453097
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41453005 ggcttaattacatttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttct 41453097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 258 - 344
Target Start/End: Original strand, 1114059 - 1114145
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc 344  Q
    |||||| |||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1114059 aattacctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc 1114145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 247 - 345
Target Start/End: Complemental strand, 31638399 - 31638301
Alignment:
Q  247 atttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||| |||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  31638399 atttatggctaaattacctttttggttctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctttaaatttct 31638301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 253 - 380
Target Start/End: Complemental strand, 44332969 - 44332832
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    |||| |||||| |||||||| ||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||             
T  44332969 ggctaaattacatttttggtcctctaactatttaattggtatcaaattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgtt 44332870  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||| ||||||||||||||    
T  44332869 actacatttagtcctttctgttagttttattcaaataa 44332832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 253 - 380
Target Start/End: Original strand, 48626063 - 48626200
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||             
T  48626063 ggcttaattacctttttggtcctctaactatttagttggtatcagattggttctctaactaaaaattgatttatttcggtcctctaagtttctcactgtt 48626162  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||| ||||||||||||||    
T  48626163 actacatttagtcctttctgttagttttattcaaataa 48626200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 254 - 343
Target Start/End: Original strand, 19681496 - 19681585
Alignment:
Q  254 gcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||||||| |||||||| ||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19681496 gcttaattacctttttggtcctctaactatttagttggtattggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 19681585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 254 - 343
Target Start/End: Original strand, 36673976 - 36674065
Alignment:
Q  254 gcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||||||| ||| |||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36673976 gcttaattacctttatggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 36674065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 41192140 - 41192043
Alignment:
Q  248 tttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  41192140 tttaatgctaaattacttttttggtcctctaactatttaattggtatcggattagtcctctaagtaaaaattgatttatttcggtcatctaagtttct 41192043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 43247414 - 43247507
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||  ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43247414 aggctgaattatattttttgtcctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcgatcctctaagtttct 43247507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 258 - 387
Target Start/End: Complemental strand, 41453450 - 41453311
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctac 347  Q
    |||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||          ||||    
T  41453450 aattacctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcgatcctctaagtttctcaccgttactac 41453351  T
Q  348 atttagtccttcctgttaattttattcaaataagtgttag 387  Q
    |||||||| || |||||| |||||||||||||| ||||||    
T  41453350 atttagtcatttctgttagttttattcaaataaatgttag 41453311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 41891966 - 41892058
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  41891966 ggctaaattacttttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttctttcggtcccttaagtttct 41892058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 252 - 343
Target Start/End: Original strand, 4155597 - 4155688
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||||||||| |||||||| ||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||||||||||    
T  4155597 aggcttaattacctttttggtcctctaactatttaattggtatcggtttgatcctctaactaaaaattgatttattttggtcctctaagttt 4155688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 258 - 345
Target Start/End: Complemental strand, 4931718 - 4931631
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  4931718 aattacatttttggtcctctaactatttaattggtatcgaattggtcctctaactaaaaattgaattatttcggtcctctaagtttct 4931631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 256 - 343
Target Start/End: Original strand, 6356289 - 6356376
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||||| ||||||||  |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6356289 ttaattacctttttggtcatctaactatttaattggtatcggattggtcctctaattaaaaattgatttatttcggtcctctaagttt 6356376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 8416483 - 8416577
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||| |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||  |||||||||    
T  8416483 aaggctaaattacctttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcggtcccttaagtttct 8416577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 8542946 - 8542856
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||| |||||||| ||||||||||||| ||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  8542946 cttaattacatttttggtcctctaactatttagttggtatcggattgatcctctaactaaaaattgatttattttggtcctctaagtttct 8542856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 252 - 387
Target Start/End: Original strand, 8936848 - 8936993
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    |||||||||||  ||||| || ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||            
T  8936848 aggcttaattatctttttagtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcacttt 8936947  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataagtgttag 387  Q
      |||||||||||| || |||||| |||||||||||||| ||||||    
T  8936948 tactacatttagtcatttctgttagttttattcaaataaatgttag 8936993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 31075645 - 31075551
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||  |||||||| ||||||||||||||||| ||| |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  31075645 aaggcttaattatctttttggtcctctaactatttaattggtattggattggtcctccaattaaaaattgatttatttcggtcctctaagtttct 31075551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 274 - 380
Target Start/End: Complemental strand, 36423798 - 36423682
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc----------tacatttagtccttcctgt 363  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||| ||||    
T  36423798 ctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgttattacatttagtcctttctgt 36423699  T
Q  364 taattttattcaaataa 380  Q
    || ||||||||||||||    
T  36423698 tagttttattcaaataa 36423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 6357215 - 6357123
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| |||||| | |||||| |||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6357215 ggcttaattacatttttgatcctctaattatttagttagtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 6357123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 16867707 - 16867799
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| |||||||| |||||||||| |||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16867707 ggctaaattacctttttggtcctctaactatataattggtatcagattggtcctctaactaaaaattgatttatttcagtcctctaagtttct 16867799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 343
Target Start/End: Complemental strand, 19681947 - 19681855
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||| |||||| |||||||| |||| |||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  19681947 aaggctaaattacctttttggtcctctgactatttaattggtatcagattagtcctctaactaaaaattgatttatttcggtcctctaagttt 19681855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 265 - 386
Target Start/End: Complemental strand, 35147127 - 35146996
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 354  Q
    |||||||| ||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||||          |||||||||||    
T  35147127 tttttggtcctctaactatttaattggtattggattagtcctctaactaaaatttgatttatttcggtcctctaagtttcttaccgttactacatttagt 35147028  T
Q  355 ccttcctgttaattttattcaaataagtgtta 386  Q
    |||| |||||| |||||||||||||| |||||    
T  35147027 cctttctgttagttttattcaaataaatgtta 35146996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 251 - 380
Target Start/End: Complemental strand, 48626515 - 48626376
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------- 343  Q
    |||||| |||||| |||||||| ||||||||||||||||| |||| |||| ||||||||||||||||||||||||||| |||||| |||||||           
T  48626515 aaggctaaattacctttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttattttggtcctttaagtttctgaccg 48626416  T
Q  344 ---ctacatttagtccttcctgttaattttattcaaataa 380  Q
       ||||||||||||||| |||||| ||||||||||||||    
T  48626415 ttgctacatttagtcctttctgttagttttattcaaataa 48626376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 7909595 - 7909524
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7909595 ctctaactatttaattgatattggattggtcctctaactaaaaattgatttatttcggtcttctaagtttct 7909524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 252 - 380
Target Start/End: Original strand, 8542498 - 8542636
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    ||||| |||||| ||||| ||  |||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||            
T  8542498 aggctaaattacctttttcgtcttctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcagtcctctaagtttctcaccgt 8542597  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||| |||||| ||||||||||||||    
T  8542598 tactacatttagtcctttctgttagttttattcaaataa 8542636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 256 - 380
Target Start/End: Complemental strand, 17363683 - 17363551
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------ctac 347  Q
    |||||||  |||||||| ||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||||||        ||||    
T  17363683 ttaattatatttttggttctctaactatttaattggtattggatttgtcctctaactaaaaattgatttatttcggtcctttaagtttcaatgttactac 17363584  T
Q  348 atttagtccttcctgttaattttattcaaataa 380  Q
    |||||||| || |||||| ||||||||||||||    
T  17363583 atttagtcatttctgttagttttattcaaataa 17363551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 28286115 - 28286209
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||  ||||||||  |||||||||||| ||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28286115 aaggcttaattatatttttggtcttctaactatttagttggtatcagattggtcctctaactaaaaattgatttattttggtcctctaagtttct 28286209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 41751662 - 41751743
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttcta 346  Q
    |||||||| || |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  41751662 tttttggtcctttaactatttaattgatattggattagtcctctaactaaaaattgacttatttcggtcctctaagtttcta 41751743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 251 - 380
Target Start/End: Original strand, 7909285 - 7909423
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------- 343  Q
    |||| ||||||||||||||| | || |||||||||||||| |||| |||||||  ||||||||||||||||||||||||||||||||||||||           
T  7909285 aaggtttaattacttttttg-tcctttaactatttaattggtatcagattggttttctaactaaaaattgatttatttcggtcctctaagtttttcaccg 7909383  T
Q  344 ---ctacatttagtccttcctgttaattttattcaaataa 380  Q
       ||||||||||||||| |||||| ||||||||||||||    
T  7909384 ttactacatttagtcctttctgttagttttattcaaataa 7909423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 17359205 - 17359273
Alignment:
Q  277 taactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17359205 taactatttaattggtattggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 17359273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 274 - 346
Target Start/End: Complemental strand, 41752079 - 41752007
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttcta 346  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41752079 ctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcagtcctctaagtttcta 41752007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 345
Target Start/End: Complemental strand, 28286562 - 28286475
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||||| |||||||| |||||||| ||||||||| ||||| |||||||||||||||| |||||||||||||||||||||    
T  28286562 aattacatttttggtcctctaactttttaattggtatcggattagtcctttaactaaaaattgattgatttcggtcctctaagtttct 28286475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 31637946 - 31638035
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| ||||| || ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||  || ||||||||||    
T  31637946 ttaattacctttttagtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcgaaccactaagtttct 31638035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 251 - 380
Target Start/End: Complemental strand, 8937301 - 8937162
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------- 343  Q
    |||||| |||||  |||||||| ||||||||||||||||  |||| |||| ||||||||| ||||| ||||||||||||||||||||||||||           
T  8937301 aaggctaaattatatttttggtcctctaactatttaattagtatcagatttgtcctctaattaaaagttgatttatttcggtcctctaagtttctcactg 8937202  T
Q  344 ---ctacatttagtccttcctgttaattttattcaaataa 380  Q
       ||||||||||||||| |||||| ||||||||||||||    
T  8937201 ttactacatttagtcctttctgttagttttattcaaataa 8937162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 29276877 - 29276961
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    |||||||||||||||||| ||||||||||||||||| || ||| |||||||||||| |||||| |||||||||| ||||||||||    
T  29276877 cttaattacttttttggtcctctaactatttaattggtaacggtttggtcctctaattaaaaaatgatttattttggtcctctaa 29276961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 251 - 339
Target Start/End: Complemental strand, 29277795 - 29277707
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    ||||||||||||| |||||||| ||||||||||||| ||| || ||| ||||||||||||||||||| |||||||||| ||||||||||    
T  29277795 aaggcttaattacctttttggtcctctaactatttatttggtaacggtttggtcctctaactaaaaaatgatttattttggtcctctaa 29277707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 36282786 - 36282878
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| ||||| || ||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||  |||||||||    
T  36282786 ggctaaattacatttttagtcctctaactatttaattggtatcagattggtcctttaactaaaaattgatttatttcggtcccttaagtttct 36282878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 343
Target Start/End: Complemental strand, 34037349 - 34037271
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||||| ||||||||||||||||| |||  |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  34037349 tttttggtcctctaactatttaattggtatatgattagtcctctgactaaaaattgatttatttcggtcctctaagttt 34037271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 253 - 380
Target Start/End: Original strand, 41191683 - 41191819
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    ||||||||||| |||||  | ||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| || ||||||||||             
T  41191683 ggcttaattaccttttta-tcctctaactatttagttgatattggattggtcctctaactaaaaattggtttatttcagttctctaagtttctcaccgtt 41191781  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||| ||||||||||||||    
T  41191782 actacatttagtcctttctgttagttttattcaaataa 41191819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 7579310 - 7579230
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||  |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || ||||| |||||    
T  7579310 tttttggtcttctaactatttaattggtatcggattagtcctctaactaaaaattgatttatttcgatcatctaattttct 7579230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 28297840 - 28297911
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||||||||| || ||||||||||||    
T  28297840 ctctaactatttaattggtattagattggtcctctaactaaaaattgatttatttcagttctctaagtttct 28297911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 8417374 - 8417294
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| ||||||||||||||||| |||| |||||||||| |||||||||||| |||||||| |||||  |||||||||    
T  8417374 tttttggtcctctaactatttaattggtatcagattggtcctttaactaaaaattaatttattttggtcccttaagtttct 8417294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 250 - 345
Target Start/End: Complemental strand, 27739117 - 27739022
Alignment:
Q  250 taaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||| |||||||||||  || || |||||||||| ||| |||| ||||| ||| ||||||||||||||||||||||||||||| | |||||||    
T  27739117 taaggctaaattactttttctgttctttaactatttatttggtatcagattgatcccctaactaaaaattgatttatttcggtccttttagtttct 27739022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 36423391 - 36423461
Alignment:
Q  275 tctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||||  ||  ||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  36423391 tctaactatttaattggcattagattggtcctctaactaaaaattaatttattttggtcctctaagtttct 36423461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 258 - 334
Target Start/End: Complemental strand, 36283651 - 36283574
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattgg-tcctctaactaaaaattgatttatttcggtcc 334  Q
    |||||| ||||| || ||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||| ||||    
T  36283651 aattacattttttgttctctaactatttaattggtatcggatttgatcctctaactaaaaattgatttatttccgtcc 36283574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 251 - 339
Target Start/End: Complemental strand, 36674181 - 36674095
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    |||||| |||||| |||||||| |||| |||||||||||| |||||| || ||| |  |||||||||||||||||||||||||||||||    
T  36674181 aaggctaaattacctttttggtcctctgactatttaattggtatcgggttagtctt--aactaaaaattgatttatttcggtcctctaa 36674095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 253 - 330
Target Start/End: Complemental strand, 41893525 - 41893448
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcg 330  Q
    |||| ||||| |||||| || || ||||||||||||| |||||||||||||| |||||||||||||| ||||||||||    
T  41893525 ggctaaattattttttttgtcctttaactatttaattaatatcggattggtcatctaactaaaaatttatttatttcg 41893448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 33717005 - 33716941
Alignment:
Q  281 tatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||||||||| || |||||||||||||| ||||||||||||| | |||||||||    
T  33717005 tatttaattgatatcggattgatcatctaactaaaaattaatttatttcggtcatttaagtttct 33716941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 275 - 380
Target Start/End: Complemental strand, 28298247 - 28298132
Alignment:
Q  275 tctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtccttcctgtt 364  Q
    |||||||||||||||| |||| ||||   ||||||| ||||||||||||||||||| | ||||||||||          |||||||||||| || |||||    
T  28298247 tctaactatttaattggtatcagatttaccctctaattaaaaattgatttatttcgattctctaagtttctcaccgttactacatttagtcatttctgtt 28298148  T
Q  365 aattttattcaaataa 380  Q
    ||||||||||||||||    
T  28298147 aattttattcaaataa 28298132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 32946758 - 32946701
Alignment:
Q  286 aattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    ||||| |||| ||||||| ||||||||||||||||||||||||||||  |||||||||    
T  32946758 aattggtatcagattggtactctaactaaaaattgatttatttcggttttctaagttt 32946701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 36423851 - 36423790
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaacta 313  Q
    ||||| |||||| |||||||| ||||||||||||||||| ||| ||||| ||||||||||||    
T  36423851 aggctaaattacctttttggtcctctaactatttaattggtattggatttgtcctctaacta 36423790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 328
Target Start/End: Original strand, 28263495 - 28263571
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttattt 328  Q
    ||||| ||||||||||||| | |  |||||||||||||  |||||| ||||||| |||||||||| |||||||||||    
T  28263495 aggctaaattacttttttgatcccttaactatttaattagtatcggtttggtcccctaactaaaatttgatttattt 28263571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 43050408 - 43050465
Alignment:
Q  277 taactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcc 334  Q
    ||||||||||||| |||| || ||||||| |||| ||||||||||||||||| |||||    
T  43050408 taactatttaattaatattggtttggtcccctaattaaaaattgatttattttggtcc 43050465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 35918799 - 35918733
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaa 317  Q
    ||||||||| | |||||||||| || ||||||||||||||||||||  ||||||   ||||||||||    
T  35918799 aaggcttaaatgcttttttggtcctttaactatttaattgatatcgctttggtctcttaactaaaaa 35918733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 328
Target Start/End: Complemental strand, 38677134 - 38677053
Alignment:
Q  247 atttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttattt 328  Q
    |||| ||||| |||||| |||||||| |  |||||||||||||| | |||| |||||||  ||||||||  |||||||||||    
T  38677134 attttaggctaaattacctttttggtcccttaactatttaattggtttcggtttggtcccttaactaaattttgatttattt 38677053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 38676082 - 38676138
Alignment:
Q  277 taactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtc 333  Q
    |||||||||||||||| |||| |||||||  ||||||||  ||||||||||| ||||    
T  38676082 taactatttaattgatttcggtttggtcccttaactaaattttgatttattttggtc 38676138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 4e-39; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 253 - 380
Target Start/End: Complemental strand, 38959173 - 38959036
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||             
T  38959173 ggcttaattacctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccgtt 38959074  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     |||||||||||||||  ||||||||||||||||||||    
T  38959073 actacatttagtcctttttgttaattttattcaaataa 38959036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 38958724 - 38958816
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38958724 ggcttaattacctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 38958816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 9989322 - 9989415
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9989322 aggctaaattacttttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 9989415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 255 - 345
Target Start/End: Original strand, 39325414 - 39325504
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||| |||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39325414 cttaattacctttttggtcctctgactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 39325504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 256 - 345
Target Start/End: Complemental strand, 25183100 - 25183011
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25183100 ttaattacctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagcttct 25183011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 253 - 387
Target Start/End: Original strand, 27185874 - 27186017
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    |||||||||||||||||||| ||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||||||||||||             
T  27185874 ggcttaattacttttttggtcctctaactatttaattggtatcagattggtcttctaactaaaaattgatttattttggtcctctaagtttctcactttt 27185973  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataagtgttag 387  Q
     ||||||||||||||||||| || |||||||||||||| ||||||    
T  27185974 actacatttagtccttcctg-tagttttattcaaataaatgttag 27186017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 1140215 - 1140123
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||| | |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1140215 ggcttaattgcctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 1140123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 251 - 380
Target Start/End: Complemental strand, 27186325 - 27186186
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------- 343  Q
    |||||| |||||| |||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||           
T  27186325 aaggctaaattacatttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcagtcctctaagtttctcactg 27186226  T
Q  344 ---ctacatttagtccttcctgttaattttattcaaataa 380  Q
       ||||||||||||||| |||||| ||||||||||||||    
T  27186225 ttactacatttagtcctttctgttagttttattcaaataa 27186186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 255 - 345
Target Start/End: Original strand, 35569777 - 35569867
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||| ||||||||  |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35569777 cttaattacctttttggtcttctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 35569867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 36440651 - 36440558
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||  |||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36440651 aggctaaattatctttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 36440558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 39325805 - 39325713
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| ||||| || |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39325805 ggctaaattacatttttagtcctctaattatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 39325713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 2182941 - 2183035
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  2182941 aaggctaaattaattttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttatgtcgtctaagtttct 2183035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 255 - 345
Target Start/End: Original strand, 24040087 - 24040177
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||  |||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24040087 cttaattatctttttggtcctttaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtccactaagtttct 24040177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 254 - 343
Target Start/End: Original strand, 19184598 - 19184687
Alignment:
Q  254 gcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||||||| |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  19184598 gcttaattacctttttggtcctctaactatttaattggtatcggtttggtcctctaactaaaaattgatttattttggtcctttaagttt 19184687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 32288521 - 32288436
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||| |||||| | |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  32288521 aattacctttttgatcctctaactatttaattgatattagattggtcctctaactaaaaattgatttatttcggtcctctaagttt 32288436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 36440199 - 36440292
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||| |||||| | ||||||||||||| ||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36440199 aggcttaattacctttttgatcctctaactatttagttggtatcagattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 36440292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 254 - 345
Target Start/End: Original strand, 32288079 - 32288170
Alignment:
Q  254 gcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||| |||||||| ||||||||||||||||| |||  |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  32288079 gcttaattacctttttggtcctctaactatttaattggtattagattggtcatctaactaaaaattgatttatttcggtcatctaagtttct 32288170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 247 - 345
Target Start/End: Original strand, 16860297 - 16860395
Alignment:
Q  247 atttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||| |||||  |||||||| ||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16860297 atttatggctaaattatctttttggtcctctaactatttaatcggtatcagattggtcctctaactaaaaattgatttatttcggtcctttaagtttct 16860395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 253 - 380
Target Start/End: Original strand, 37424262 - 37424399
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    ||||||||||  |||||| | ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||             
T  37424262 ggcttaattatctttttgatcctctaactatttatttggtatcagattggtcctctaactaaaaattgatttatttcggtcttctaagtttctcactgtt 37424361  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||| ||||||||||||||    
T  37424362 actacatttagtcctttctgttagttttattcaaataa 37424399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 345
Target Start/End: Original strand, 11315969 - 11316050
Alignment:
Q  264 ttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| || || |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11315969 tttttttgtcctttaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcgatcctctaagtttct 11316050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 345
Target Start/End: Complemental strand, 11316400 - 11316312
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||   ||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11316400 ttaattacttttttta-actttaattatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 11316312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 24040542 - 24040445
Alignment:
Q  248 tttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||| ||||||||||||||| ||||||||||||||||  |||||||||| ||||||||||||||||||| ||||||| ||||| |||||||||    
T  24040542 tttatggctaaattacttttttggtcctctaactatttaattagtatcggattgatcctctaactaaaaattgacttatttcagtcctttaagtttct 24040445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 380
Target Start/End: Complemental strand, 37424709 - 37424578
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctac 347  Q
    |||||| |||||||| ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||| ||||||||||||||          ||||    
T  37424709 aattacctttttggtcctctaactatttaattg-tattggattagtcctctaactaaaaattgatttattttggtcctctaagtttctcaccgttactac 37424611  T
Q  348 atttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||| |||||| ||||||||||||||    
T  37424610 atttagtcctttctgttagttttattcaaataa 37424578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 274 - 380
Target Start/End: Complemental strand, 9989752 - 9989636
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtccttcctgt 363  Q
    ||||| ||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||          ||||||||||||||| ||||    
T  9989752 ctctacctatttaattggtatcggattgatcttctaactaaaaattgatttatttcggtcctctaagtttctcactgttactacatttagtcctttctgt 9989653  T
Q  364 taattttattcaaataa 380  Q
    || ||||||||||||||    
T  9989652 tagttttattcaaataa 9989636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 25567442 - 25567348
Alignment:
Q  249 ttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||||| |||||||||||| || || |||||||||||||| |||||||||||| || ||||||||||||||||||||| | |||| |||||||    
T  25567442 ttaaggctaaattacttttttagtcctttaactatttaattggtatcggattggttctttaactaaaaattgatttattttgatcctttaagttt 25567348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 2183372 - 2183301
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||| || |||||||||    
T  2183372 ctctaactatttaattggtatcggattgatcctttaactaaaaattgatttatttcggttctgtaagtttct 2183301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 34264790 - 34264706
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgat----ttatttcggtcctctaagtttct 345  Q
    |||||||| ||| ||||||||||||| ||| | |||||||||||||||||||||||||    |||||||||||||||||||||||    
T  34264790 tttttggtcctccaactatttaattggtattgaattggtcctctaactaaaaattgatttaattatttcggtcctctaagtttct 34264706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 33817729 - 33817659
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttattt 328  Q
    |||||| |||||| | ||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  33817729 aattacctttttgattctctaactatttaattggtatcggattgatcctctaactaaaaatttatttattt 33817659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 19128503 - 19128434
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgat 322  Q
    ||||||||||| |||||||| ||||||||||||||||  |||| ||||| ||||||||||||||||||||    
T  19128503 ggcttaattacctttttggtcctctaactatttaattagtatcagattgatcctctaactaaaaattgat 19128434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 31756749 - 31756666
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    |||||||| ||||||||   ||||||||||||||| || ||| || |||||||||||||||| |||||||||| ||||||||||    
T  31756749 ttaattacctttttggtctcctaactatttaattggtaacggtttagtcctctaactaaaaaatgatttattttggtcctctaa 31756666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 34264405 - 34264454
Alignment:
Q  296 ggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  34264405 ggattggccctctaactaaaaattgatttatttcgatcctctaagtttct 34264454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 345
Target Start/End: Complemental strand, 35570219 - 35570138
Alignment:
Q  264 ttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| || ||||||||||||||||| |||  ||||  ||||||||||||||||||||||||||  ||| |||||||||||    
T  35570219 tttttttgtcctctaactatttaattggtatttgattactcctctaactaaaaattgatttattttagtcttctaagtttct 35570138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 29198973 - 29199044
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||||||||||||   ||| ||||||||| ||||||||||||||||||| | || |||||||||    
T  29198973 ctctaactatttaattgatattaaattagtcctctaattaaaaattgatttatttcgattctttaagtttct 29199044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 19185637 - 19185553
Alignment:
Q  250 taaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcc 334  Q
    ||||||| |||||| |||||||| |  |||||||||||||  ||| || ||||||| |||||||||| ||||||||||| |||||    
T  19185637 taaggctaaattacctttttggtcccttaactatttaattagtattggtttggtcccctaactaaaatttgatttattttggtcc 19185553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 34264349 - 34264401
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggt 303  Q
    ||||||||||||| |||||| | ||||||||||||||||| | | ||||||||    
T  34264349 aaggcttaattacctttttgatcctctaactatttaattggtgttggattggt 34264401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 1652026 - 1651929
Alignment:
Q  248 tttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1652026 tttaaggtttaattacctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 1651929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 1740402 - 1740305
Alignment:
Q  248 tttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1740402 tttaaggtttaattacctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 1740305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 1432136 - 1432223
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1432136 aattacttttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 1432223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 247 - 345
Target Start/End: Original strand, 1646495 - 1646593
Alignment:
Q  247 atttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||||||||| |||||||| ||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1646495 attttaggcttaattacctttttggtcctctaactatttaattggtatcagattggttctctaactaaaaattgatttatttcggtcctctaagtttct 1646593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 253 - 380
Target Start/End: Original strand, 15048399 - 15048536
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    |||| |||||| |||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||             
T  15048399 ggctaaattacctttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaagtttctgaccgtt 15048498  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||| ||||||||||||||    
T  15048499 actacatttagtcctttctgttagttttattcaaataa 15048536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 15048847 - 15048757
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15048847 cttaattacctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 15048757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 33819783 - 33819877
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||| |||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33819783 aaggctaaattacctttttggtcctctaattatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 33819877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 1646957 - 1646864
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||| ||||| || ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1646957 aggcttaattacctttttcgtcctctaactatttaattggtatcggattggtcatctaactaaaaattgatttatttcggtcctctaagtttct 1646864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 37569313 - 37569406
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| ||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37569313 aggcttgattacctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 37569406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 27473072 - 27473164
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||  |||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27473072 ggcttaattatctttttggtcctctaactatttagttgatatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 27473164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 45276597 - 45276689
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||  |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45276597 ggcttaattatctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 45276689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 258 - 345
Target Start/End: Complemental strand, 11174079 - 11173992
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11174079 aattacctttttggtcctctaactatttaattggtatctgattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 11173992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 257 - 380
Target Start/End: Original strand, 1739952 - 1740085
Alignment:
Q  257 taattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc----------ta 346  Q
    ||||||| |||||||| ||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||          ||    
T  1739952 taattacctttttggtcctctaactatttaatcggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaagtttctcactgttatta 1740051  T
Q  347 catttagtccttcctgttaattttattcaaataa 380  Q
    |||||||||||| |||||| ||||||||||||||    
T  1740052 catttagtcctttctgttagttttattcaaataa 1740085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 253 - 380
Target Start/End: Complemental strand, 34470994 - 34470857
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||             
T  34470994 ggcttaattacctttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttattttggtcctctaagtttttcaccgtt 34470895  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||| ||||||||||||||    
T  34470894 gctacatttagtcctttctgttagttttattcaaataa 34470857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 38589035 - 38588945
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| ||||||||| ||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38589035 cttaattatttttttggttctctaactatttaattggtattggattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 38588945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 243 - 345
Target Start/End: Complemental strand, 45277056 - 45276954
Alignment:
Q  243 aaacatttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtt 342  Q
    ||||| |||||||| |||||  |||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  45277056 aaacaattaaggctaaattatctttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaatttatttatttcggtcctctaagtt 45276957  T
Q  343 tct 345  Q
    |||    
T  45276956 tct 45276954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 256 - 345
Target Start/End: Complemental strand, 40660333 - 40660244
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| |||||||| ||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40660333 ttaattacctttttggtcctctaactatttagttgttatcgaattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 40660244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 15871621 - 15871713
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||    
T  15871621 ggcttaattacctttttggtcctttaactatttaattgatatcggattggtcctctaactaaaaattaatttattttggtcctctaaatttct 15871713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 250 - 345
Target Start/End: Complemental strand, 27473524 - 27473429
Alignment:
Q  250 taaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||| |||||| |||||||| ||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27473524 taaggctaaattacctttttggtcctctaacaatttaattggtatcagattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 27473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 1870387 - 1870293
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||  ||| | |||||||||||||||||||||||||||||||||||||||||||    
T  1870387 aaggcttaattacatttttggtcctctaactatttaattggtataagatagatcctctaactaaaaattgatttatttcggtcctctaagtttct 1870293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 7535285 - 7535191
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||  |||||||| ||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7535285 aaggctaaattatctttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 7535191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 253 - 380
Target Start/End: Original strand, 40048067 - 40048196
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa--gtttctacatt 350  Q
    |||| ||||||||||||| || |||||||||||||||||||| ||||| |||||||||||||||||| |||||||| | | ||||||  ||| |||||||    
T  40048067 ggctaaattacttttttgataatctaactatttaattgatattggattagtcctctaactaaaaattaatttattttgattctctaactgttactacatt 40048166  T
Q  351 tagtccttcctgttaattttattcaaataa 380  Q
    ||||| || |||||| ||||||||||||||    
T  40048167 tagtcatttctgttagttttattcaaataa 40048196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 253 - 339
Target Start/End: Original strand, 45077221 - 45077307
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  45077221 ggcttaattacctttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttatttcggtcctctaa 45077307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 22763384 - 22763291
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  22763384 aggctaaattacctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcccttaagtttct 22763291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 33296135 - 33296042
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||||| ||||||||||||||||| |||| |||| |||||||||||||||||| |||||||||||||||||||||||||    
T  33296135 aggctaaattacctttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattaatttatttcggtcctctaagtttct 33296042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 15872071 - 15871979
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| |||||||| ||||||||||||||||  |||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15872071 ggctaaattacatttttggtcctctaactatttaatttgtatcagattggtcctctaaataaaaattgatttatttcggtcctctaagtttct 15871979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 40659983 - 40660075
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||| ||| ||| |||||||||||||||||||||||| |||||||||||||||    
T  40659983 ggctaaattacttttttggtcctctaactatttaattggtatcgaattagtcatctaactaaaaattgatttatttcagtcctctaagtttct 40660075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 274 - 346
Target Start/End: Complemental strand, 44595030 - 44594958
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttcta 346  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44595030 ctctaactatttaattgatattggattagtcctctaactaaaaattgatttatttcggtcctctaagtttcta 44594958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 252 - 339
Target Start/End: Complemental strand, 11920223 - 11920136
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    ||||| |||||| ||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11920223 aggctaaattacctttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttgggtcctctaa 11920136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 380
Target Start/End: Original strand, 7534845 - 7534970
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct-acatttagt 354  Q
    |||||||| ||||||||  ||||| |||||| ||||||||||||| ||||| ||| |||||||||||||||||||||| | ||||||||| ||  |||||    
T  7534845 ttaattacctttttggtcttctaattatttagttgatatcggattagtcctttaattaaaaattgatttatttcggtcatttaagtttctcaccgttagt 7534944  T
Q  355 ccttcctgttaattttattcaaataa 380  Q
    |||| |||||| ||||||||||||||    
T  7534945 cctttctgttagttttattcaaataa 7534970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 45077654 - 45077561
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||||| |||||||||||| |||  |||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45077654 aggctaaattacctttttggtcctctaactatttgattagtatcagattggtcctctaactaaaaattgatttattttggtcctctaagtttct 45077561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 255 - 380
Target Start/End: Original strand, 5434902 - 5435037
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------c 344  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||| ||||||| |||||| |||||||||||||||  |||||||||          |    
T  5434902 cttaattacctttttggtcctctaactatttaattggtatcggattgatcctctacctaaaatttgatttatttcggttttctaagtttctcaccgttac 5435001  T
Q  345 tacatttagtccttcctgttaattttattcaaataa 380  Q
    |||||||||||||| |||||| ||||||||||||||    
T  5435002 tacatttagtcctttctgttagttttattcaaataa 5435037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 5435338 - 5435258
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  5435338 tttttggtcctctaactatataattggtatcggattggtgctctaactaaaaattgatttatttcggtcctttaagtttct 5435258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 27669440 - 27669508
Alignment:
Q  277 taactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27669440 taactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaaatttct 27669508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 5152963 - 5152892
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5152963 ctctgactgtttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 5152892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 38588608 - 38588679
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38588608 ctctaactatttaattggtattagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 38588679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 265 - 380
Target Start/End: Original strand, 7949424 - 7949549
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 354  Q
    |||||||| ||||||||||||||||| |||| |||||||| | ||| ||||||||||||||||||||||||||||||||          |||||||||||    
T  7949424 tttttggtcctctaactatttaattggtatcagattggtcttttaattaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttagt 7949523  T
Q  355 ccttcctgttaattttattcaaataa 380  Q
    |||| |||||| ||||||||||||||    
T  7949524 cctttctgttagttttattcaaataa 7949549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 247 - 345
Target Start/End: Original strand, 11707744 - 11707842
Alignment:
Q  247 atttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||||||||  |||||| | ||||||||||||| ||| |||| |||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  11707744 attttaggcttaattatctttttgatcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttgtttcgatcctctaagtttct 11707842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 254 - 380
Target Start/End: Original strand, 5152536 - 5152671
Alignment:
Q  254 gcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt---------- 343  Q
    |||||||||| |||||| | |||||||| |||||||| |||| |||||||||||| ||||||||||||||||||| ||||||||||||||              
T  5152536 gcttaattacctttttgatcctctaactgtttaattggtatcagattggtcctctgactaaaaattgatttattt-ggtcctctaagtttctcattgtta 5152634  T
Q  344 ctacatttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  5152635 ctacatttagtcctttctgttagttttattcaaataa 5152671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 252 - 335
Target Start/End: Original strand, 24652822 - 24652905
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcct 335  Q
    |||||||||||| |||||||| ||||||||||||||||| || ||| ||||||||||||||||||| |||||||||| ||||||    
T  24652822 aggcttaattacatttttggtcctctaactatttaattggtaacggtttggtcctctaactaaaaaatgatttattttggtcct 24652905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 252 - 339
Target Start/End: Complemental strand, 24666129 - 24666042
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    |||||||||||| |||||||| ||||||||||||||||| || ||| |||||||| |||||||||| |||||||||| ||||||||||    
T  24666129 aggcttaattacctttttggtcctctaactatttaattggtaacggtttggtcctttaactaaaaaatgatttattttggtcctctaa 24666042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 253 - 380
Target Start/End: Original strand, 1869934 - 1870070
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    |||| |||||| |||||| | ||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| ||||||||||             
T  1869934 ggctaaattacctttttg-tcctctaactatttaattggtatcagattgatcctctaactaaaaattaatttatttcggttctctaagtttctcaccgtt 1870032  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||| ||||||||||||||    
T  1870033 actacatttagtcctttctgttagttttattcaaataa 1870070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 335
Target Start/End: Original strand, 44594604 - 44594683
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcct 335  Q
    |||||||| |||||||| |||||| |||||||||| |||  |||||||||| ||||||||||||||||||||||||||||    
T  44594604 ttaattacatttttggtcctctaattatttaattgctattagattggtcctttaactaaaaattgatttatttcggtcct 44594683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 343
Target Start/End: Original strand, 33295739 - 33295826
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    ||||| || |||||||| ||||||||||||| ||| |||| |||||||| ||||| |||||||||||||||||||||  |||||||||    
T  33295739 ttaatgacctttttggtcctctaactatttagttggtatcagattggtcttctaattaaaaattgatttatttcggtattctaagttt 33295826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 22762525 - 22762605
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||  |||||||||||||||| |||||||||  |||||||| ||||||||||||||||||| |||  |||||||||    
T  22762525 tttttggtcatctaactatttaattggtatcggattaatcctctaattaaaaattgatttatttcgatcccttaagtttct 22762605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 27669849 - 27669793
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcg 330  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  27669849 ctctaactatttaattggtatcagattggtcttctaactaaaaattgatttatttcg 27669793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 12643966 - 12643891
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttattt 328  Q
    ||||||||||  |||||||| ||||||||||||||||  |||||  ||||||||||||||||| ||||||||||||    
T  12643966 ggcttaattatctttttggtcctctaactatttaatttgtatcgatttggtcctctaactaaatattgatttattt 12643891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 15741682 - 15741607
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttattt 328  Q
    ||||||||||| |||||||| |  |||||||||||||| |||||| |||||||||||||||||  |||||||||||    
T  15741682 ggcttaattacctttttggtcccttaactatttaattggtatcggtttggtcctctaactaaattttgatttattt 15741607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 274 - 341
Target Start/End: Complemental strand, 33820042 - 33819975
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagt 341  Q
    ||||||||||||||||| |||||||||| || |||||||||||||| ||||||||| ||| |||||||    
T  33820042 ctctaactatttaattggtatcggattgatcatctaactaaaaattaatttatttcagtcttctaagt 33819975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 37569743 - 37569673
Alignment:
Q  275 tctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| ||||||||||||||||||||| || ||||| |||||||| |||||||| |||||||||| |||||    
T  37569743 tctaagtatttaattgatatcggattgatcatctaattaaaaatttatttattttggtcctctaaatttct 37569673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 345
Target Start/End: Complemental strand, 40048501 - 40048412
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| |||||| | |||||  |||||| ||| ||||| |||| |||||||||||||||||| ||||||| | ||||||||||||||    
T  40048501 ttaattacctttttgatcctctagttatttagttggtatcgtattgatcctctaactaaaaattgttttattttgatcctctaagtttct 40048412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 15740613 - 15740705
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||| | |||||||| |  |||||||||||||  |||||| ||||||| |||||||||| ||||||||||| |||||  |||||||||    
T  15740613 ggcttaattgcctttttggtccattaactatttaattagtatcggtttggtcccctaactaaaatttgatttattttggtcccttaagtttct 15740705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 11920074 - 11920135
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaact 312  Q
    ||||||||||||| |||||||| ||||||||||||| ||| | | |||||||||||||||||    
T  11920074 aaggcttaattacatttttggtcctctaactatttatttggttttggattggtcctctaact 11920135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 326
Target Start/End: Complemental strand, 29770454 - 29770376
Alignment:
Q  248 tttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttat 326  Q
    ||||||||| |||||| |||||||| |  |||||||||||||| | |||| |||||||  ||||||||  |||||||||    
T  29770454 tttaaggctaaattacctttttggtcccttaactatttaattggtttcggtttggtcccttaactaaattttgatttat 29770376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 441
Target Start/End: Original strand, 31824739 - 31824789
Alignment:
Q  391 ttgcttgatttcagcgtccttttcaacatattgtttggtcttagcacaaat 441  Q
    |||||||||||||| ||| |||| ||||  |||||||||||||||||||||    
T  31824739 ttgcttgatttcagtgtcgttttgaacacgttgtttggtcttagcacaaat 31824789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 306
Target Start/End: Complemental strand, 18298644 - 18298612
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcct 306  Q
    ||||||||||||||||||||| |||||||||||    
T  18298644 ctctaactatttaattgatattggattggtcct 18298612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 7e-38; HSPs: 98)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 251 - 380
Target Start/End: Complemental strand, 4757945 - 4757806
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------- 343  Q
    ||||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  4757945 aaggcttaattacatttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccg 4757846  T
Q  344 ---ctacatttagtccttcctgttaattttattcaaataa 380  Q
       ||||||||||||||| |||||| ||||||||||||||    
T  4757845 ttactacatttagtcctttctgttagttttattcaaataa 4757806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 250 - 345
Target Start/End: Original strand, 39664181 - 39664276
Alignment:
Q  250 taaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39664181 taaggcttaattacctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaaatgatttatttcggtcctctaagtttct 39664276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 253 - 380
Target Start/End: Complemental strand, 10506398 - 10506261
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    |||| |||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||             
T  10506398 ggctaaattacctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcactgtt 10506299  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||| ||||||||||||||    
T  10506298 actacatttagtcctttctgttagttttattcaaataa 10506261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 251 - 380
Target Start/End: Original strand, 1994167 - 1994306
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------- 343  Q
    ||||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||           
T  1994167 aaggcttaattacatttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcaccg 1994266  T
Q  344 ---ctacatttagtccttcctgttaattttattcaaataa 380  Q
       ||||||||||||||| |||||| ||||||||||||||    
T  1994267 ttgctacatttagtcctttctgttagttttattcaaataa 1994306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 251 - 380
Target Start/End: Original strand, 1999326 - 1999465
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------- 343  Q
    ||||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||           
T  1999326 aaggcttaattacatttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcaccg 1999425  T
Q  344 ---ctacatttagtccttcctgttaattttattcaaataa 380  Q
       ||||||||||||||| |||||| ||||||||||||||    
T  1999426 ttgctacatttagtcctttctgttagttttattcaaataa 1999465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 251 - 380
Target Start/End: Complemental strand, 5900875 - 5900736
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------- 343  Q
    |||||| |||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  5900875 aaggctaaattacatttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccg 5900776  T
Q  344 ---ctacatttagtccttcctgttaattttattcaaataa 380  Q
       ||||||||||||||| |||||| ||||||||||||||    
T  5900775 ttactacatttagtcctttctgttagttttattcaaataa 5900736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 54108352 - 54108260
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54108352 ggctaaattacctttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 54108260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 39241363 - 39241450
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39241363 aattacatttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 39241450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 18464910 - 18464816
Alignment:
Q  249 ttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    ||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  18464910 ttaaggcttaattacctttttggtcctctaactatttaattggtatcgaattggtcttctaactaaaaattgatttatttcggtcctctaagttt 18464816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 54107900 - 54107994
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||| ||||| ||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54107900 aaggctttattacctttttggtcatctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 54107994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 51509118 - 51509211
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51509118 aggcttaattacctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcgatcctctaagtttct 51509211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 255 - 380
Target Start/End: Complemental strand, 1994616 - 1994481
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------c 344  Q
    ||||||||| |||||||| ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||          |    
T  1994616 cttaattacatttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcactgttac 1994517  T
Q  345 tacatttagtccttcctgttaattttattcaaataa 380  Q
    |||||||||||||| |||||| ||||||||||||||    
T  1994516 tacatttagtcctttctgttatttttattcaaataa 1994481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 22202066 - 22201974
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||  |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22202066 ggcttaattatctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 22201974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 26318182 - 26318274
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| ||||| || ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26318182 ggcttaattacctttttagtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 26318274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 27801501 - 27801581
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27801501 tttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 27801581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 251 - 380
Target Start/End: Complemental strand, 27801941 - 27801802
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------- 343  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||||||||| |||||| |||||||||||||||||||||||||           
T  27801941 aaggcttaattacctttttggtcctctaactatttaattggtatcgaattggtcctctaattaaaaaatgatttatttcggtcctctaagtttctcactg 27801842  T
Q  344 ---ctacatttagtccttcctgttaattttattcaaataa 380  Q
       ||||||||||||||| |||||| ||||||||||||||    
T  27801841 ttactacatttagtcctttctgttagttttattcaaataa 27801802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 4773241 - 4773335
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  4773241 aaggcttaattacctttttggtcctctaactatttaattggtatcagattgatcctctaattaaaaattgatttatttcggtcctctaagtttct 4773335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 252 - 387
Target Start/End: Complemental strand, 21569196 - 21569051
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    |||||| ||||| |||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||            
T  21569196 aggcttgattacctttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattgatttatttcgatcctctaagtttctcaccgt 21569097  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataagtgttag 387  Q
      |||||||||||| || |||||| |||||||||||||| ||||||    
T  21569096 tactacatttagtcttttctgttagttttattcaaataaatgttag 21569051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 247 - 345
Target Start/End: Complemental strand, 28986597 - 28986499
Alignment:
Q  247 atttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| ||||| |||||| |||||||| |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28986597 attttaggctaaattacctttttggtcctctaattatttaattggtatcggattggtcctttaactaaaaattgatttatttcggtcctctaagtttct 28986499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 32633517 - 32633423
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||  |||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32633517 aaggctaaattatctttttggtcctctaactatttaattgttatcggattggtcctttaactaaaaattgatttatttcggtcctctaagtttct 32633423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 253 - 343
Target Start/End: Complemental strand, 44317665 - 44317575
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  44317665 ggcttaattacctttttggtcctctaactatttaattggtatcggtttggtcctctaactaaaaattgatttattttggtcctctaagttt 44317575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 247 - 345
Target Start/End: Original strand, 44893734 - 44893832
Alignment:
Q  247 atttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||| |||||  |||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44893734 atttatggctaaattatctttttggttctctaactatttaattggtatcggattggtcttctaactaaaaattgatttatttcggtcctctaagtttct 44893832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 4757493 - 4757586
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||| |||||||| ||||||||||||| |||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4757493 aggcttaattacatttttggtcctctaactatttagttggaatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttct 4757586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 5900422 - 5900515
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||| ||||||||  |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5900422 aggcttaattacatttttggtcatctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttct 5900515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 18464455 - 18464548
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||| | ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18464455 aggctaaattacatttttgctcctctaactatttaattggtattggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 18464548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 258 - 380
Target Start/End: Original strand, 47669264 - 47669396
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctac 347  Q
    |||||| |||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||          ||||    
T  47669264 aattacctttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattaatttatttcggtcctctaagtttctcaccgttactac 47669363  T
Q  348 atttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||| |||||| ||||||||||||||    
T  47669364 atttagtcctttctgttagttttattcaaataa 47669396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 53716294 - 53716386
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| ||||||||||||| | ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  53716294 aggctaaattacttttttg-tcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 53716386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 247 - 343
Target Start/End: Original strand, 13866014 - 13866110
Alignment:
Q  247 atttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||||| |||||||| |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  13866014 atttaaggattaattacctttttggtcctctaactatttaattggtatcggtttggtcctctaactaaaaattgatttattttggtcctttaagttt 13866110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 15986684 - 15986592
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||  |||||||| |||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15986684 ggcttaattaactttttggtcctctaattatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 15986592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 24429017 - 24428925
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| ||||||||  |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24429017 ggcttaattacctttttggtcatctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcttctaagtttct 24428925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 45307142 - 45307050
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45307142 ggcttaattacctttttggtcctctaactatttagttggtatcagattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 45307050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 256 - 380
Target Start/End: Original strand, 10505951 - 10506085
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ct 345  Q
    |||||||| |||||||| ||||||||||||||||| |||| |||| ||||| ||||||||||||||||||||||||||||||||||||          ||    
T  10505951 ttaattacctttttggtcctctaactatttaattggtatcagattagtcctttaactaaaaattgatttatttcggtcctctaagtttctcaccattact 10506050  T
Q  346 acatttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||||| |||||| ||||||||||||||    
T  10506051 acatttagtcctttctgttagttttattcaaataa 10506085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 254 - 345
Target Start/End: Complemental strand, 16932055 - 16931964
Alignment:
Q  254 gcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||| |||||||| |||||||| |||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  16932055 gcttaattacctttttggtcctctaactttttaattggtatcggatttgtcctctaactaaaaattgatttatttctgtcctctaagtttct 16931964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 242 - 345
Target Start/End: Original strand, 22201605 - 22201708
Alignment:
Q  242 caaacatttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagt 341  Q
    |||| |||||||| | |||||| |||||||| ||||||||||||||||| |||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  22201605 caaaaatttaaggttaaattacatttttggtcctctaactatttaattggtatcggattgatcctctaaataaaaattgatttatttctgtcctctaagt 22201704  T
Q  342 ttct 345  Q
    ||||    
T  22201705 ttct 22201708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 252 - 380
Target Start/End: Complemental strand, 42592235 - 42592097
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    |||||||||||| |||||||| ||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||| ||||||||||||            
T  42592235 aggcttaattacatttttggtcctctaactatttagttggtatcaaattggtcctctaactaaaaattgatttatttcgatcctctaagtttctcaccgt 42592136  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||| |||||| ||||||||||||||    
T  42592135 tactacatttagtcctttctgttagttttattcaaataa 42592097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 252 - 343
Target Start/End: Original strand, 49528148 - 49528239
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||||||||| |||||||| ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  49528148 aggcttaattacctttttggtcctctaactatttaattggtatcggtttggtcctctagctaaaaattgatttattttggtcctctaagttt 49528239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 258 - 393
Target Start/End: Complemental strand, 8474291 - 8474146
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctac 347  Q
    |||||| |||||||| ||||||||||||||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||||||          ||||    
T  8474291 aattacctttttggtcctctaactatttaattggtatcgaattagtcctctaattaaaaattgatttatttcggtcctctaagtttatgaccgttactac 8474192  T
Q  348 atttagtccttcctgttaattttattcaaataagtgttagtttttg 393  Q
    ||||||||||| |||||| ||||||||||||||  |||||| ||||    
T  8474191 atttagtcctttctgttagttttattcaaataaacgttagtgtttg 8474146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 26318634 - 26318540
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||| ||||||||  |||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  26318634 aaggctaaattacctttttggtcatctaactatttaattggtatcggattaatcctctaactaaaaattgatttatttcggtcctctaagtttct 26318540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 248 - 387
Target Start/End: Complemental strand, 39664639 - 39664490
Alignment:
Q  248 tttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt---- 343  Q
    |||| |||| |||||| |||||||| ||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||||||||||||||        
T  39664639 tttatggctaaattacatttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattaatttatttcggtcctctaagtttctca 39664540  T
Q  344 ------ctacatttagtccttcctgttaattttattcaaataagtgttag 387  Q
          |||||||||||| || |||||| |||||||||||||| ||||||    
T  39664539 ccgttactacatttagtcttttctgttagttttattcaaataaatgttag 39664490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 253 - 380
Target Start/End: Original strand, 42591784 - 42591921
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    |||| |||||| |||||||| ||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||| |||||||||             
T  42591784 ggctaaattacctttttggtcctctaactatttaatcggtatcggatttgtcctctaactaaaaattgatttatttcggtcttctaagtttctcactgtt 42591883  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||| ||||||||||||||    
T  42591884 actacatttagtcctttctgttagttttattcaaataa 42591921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 44894192 - 44894098
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||||| |||||||| ||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||| |||||||||||||    
T  44894192 aaggtttaattacctttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttatttcggacctctaagtttct 44894098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 248 - 387
Target Start/End: Original strand, 45306827 - 45306976
Alignment:
Q  248 tttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt---- 343  Q
    |||| |||| |||||| |||||| | ||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||        
T  45306827 tttatggctaaattacctttttgatcctctaactatttaattggtatcggattagtcctctaactaaaatttgatttatttcggtcctctaagtttctca 45306926  T
Q  344 ------ctacatttagtccttcctgttaattttattcaaataagtgttag 387  Q
          ||| ||||||||||| |||||| |||||||||||||| ||||||    
T  45306927 ctgttactatatttagtcctttctgttagttttattcaaataaatgttag 45306976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 253 - 380
Target Start/End: Complemental strand, 47669709 - 47669572
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    ||||||||||  |||||||| ||||||||||||| ||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||             
T  47669709 ggcttaattatctttttggtcctctaactatttatttggtatcggattggttctctaactaaaaattaatttatttcggtcctctaagtttctcaccgtt 47669610  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||| ||||||||||||||    
T  47669609 actacatttagtccttactgttagttttattcaaataa 47669572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 249 - 380
Target Start/End: Complemental strand, 54752617 - 54752476
Alignment:
Q  249 ttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----- 343  Q
    ||||| ||||||||| |||||||| ||||||||||||| ||| |||| ||||||| |||||||||||||||||||||||||||| ||||||||||         
T  54752617 ttaagccttaattacctttttggtcctctaactatttagttggtatcagattggttctctaactaaaaattgatttatttcggtgctctaagtttctcat 54752518  T
Q  344 -----ctacatttagtccttcctgttaattttattcaaataa 380  Q
         ||||||||||||||| |||||| ||||||||||||||    
T  54752517 cgttactacatttagtcctttctgttagttttattcaaataa 54752476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 11256554 - 11256461
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| ||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  11256554 aggcgtaattacctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaaatgatttatttcggtcctttaagtttct 11256461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 256 - 345
Target Start/End: Complemental strand, 47303463 - 47303374
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||| |||||||||    
T  47303463 ttaattacatttttggtcctctaactatttaattggtatcggattggtcctctaagtaaaaattgatttattttggtcctttaagtttct 47303374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 12791614 - 12791534
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  12791614 tttttggtcctctaactatttaattggtatcggattggtcctctaattaaaaattgatttatttcggtcctctaaatttct 12791534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 28985509 - 28985601
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||  ||||||| ||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||| |||||||||    
T  28985509 ggcttaattacccttttggtcctctaactatttaattggtatcagattggtcctctaactaaaatttgatttatttcggtcctataagtttct 28985601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 252 - 380
Target Start/End: Original strand, 46152614 - 46152752
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    ||||| |||||| | |||||| |||||||||||||||||  |||| ||| ||||||||||||||||||||||||||||||||||||||||||            
T  46152614 aggctaaattacatctttggtcctctaactatttaattggcatcgaattagtcctctaactaaaaattgatttatttcggtcctctaagtttctcaccat 46152713  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||| |||||| ||||||||||||||    
T  46152714 cactacatttagtcctttctgttagttttattcaaataa 46152752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 252 - 343
Target Start/End: Complemental strand, 53716744 - 53716653
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||||||||| ||||||||  |||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| |||||||    
T  53716744 aggcttaattacctttttggtcatctaactatttaattggtatcagattggtcttctaactaaaaattgatttatttcggtcctttaagttt 53716653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 253 - 380
Target Start/End: Original strand, 12203551 - 12203688
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    ||||||||||| |||||  | ||||||||||||||||| ||||||||||||| ||||||||||||||| | ||||||||||||||||||||             
T  12203551 ggcttaattaccttttttatcctctaactatttaattggtatcggattggtcatctaactaaaaattggtatatttcggtcctctaagtttctcactgtt 12203650  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     |||||||||||| || |||||||||||||||||||||    
T  12203651 actacatttagtcttttctgttaattttattcaaataa 12203688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 249 - 345
Target Start/End: Complemental strand, 7681578 - 7681481
Alignment:
Q  249 ttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcc-tctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| ||||||  ||||||| |||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  7681578 ttaaggctaaattacacttttggtcctctaattatttaattggtatcggattagtccctctaactaaaaattgatttatttcggtcctctaagtttct 7681481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 387
Target Start/End: Original strand, 21568758 - 21568890
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 354  Q
    |||||| | ||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||          |||||||||||    
T  21568758 tttttgatcctctaactatttaattggtatcggattgatcctctaattaaaaattgatttatttcggtcctctaagtttctcaccgttactacatttagt 21568857  T
Q  355 ccttcctgttaattttattcaaataagtgttag 387  Q
    | || |||||| |||||||||||||| ||||||    
T  21568858 catttctgttagttttattcaaataaatgttag 21568890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 24428566 - 24428659
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||  |||||||| ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24428566 aggctaaattatctttttggtcctctaactattcaattggtatcagattggtcctctaactaaaaattgatttatttcgatcctctaagtttct 24428659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 380
Target Start/End: Original strand, 29818182 - 29818314
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctac 347  Q
    |||||| |||||||| ||||||||||||||||| |||| |||| ||||||||| ||||||||||||||||||| ||||||||||||          ||||    
T  29818182 aattacctttttggtcctctaactatttaattggtatcagattagtcctctaaataaaaattgatttatttcgatcctctaagtttctcactgttactac 29818281  T
Q  348 atttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||| |||||| ||||||||||||||    
T  29818282 atttagtcctttctgttagttttattcaaataa 29818314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 255 - 380
Target Start/End: Complemental strand, 29818625 - 29818490
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------c 344  Q
    ||||||||| |||||| |  ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||          |    
T  29818625 cttaattacctttttgatcttctaattatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctttaagtttctcaccgttac 29818526  T
Q  345 tacatttagtccttcctgttaattttattcaaataa 380  Q
    |||||||||||||| |||||| ||||||||||||||    
T  29818525 tacatttagtcctttctgttagttttattcaaataa 29818490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 345
Target Start/End: Original strand, 7163463 - 7163542
Alignment:
Q  266 ttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||| ||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  7163463 ttttggtcctctaactatttaattggtattggattggtcatctaactaaaaattaatttatttcggtcctctaagtttct 7163542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 8473867 - 8473938
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8473867 ctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtactctaagtttct 8473938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 345
Target Start/End: Complemental strand, 12203988 - 12203909
Alignment:
Q  266 ttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||| | ||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  12203988 ttttggtcccctaactatttaattggtatcggattgatcctctaattaaaaattgatttatttcggtcctctaagtttct 12203909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 19883669 - 19883598
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  19883669 ctctaactatttaattggtatcggattggttctctaactaaaaaatgatttatttcggtcctctaagtttct 19883598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 21969634 - 21969721
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||||| ||||||||||||||||| || | |||| |||||||||||||||||||||||||||||||| |||||||||||    
T  21969634 aattacctttttggtcctctaactatttaattggtaacagattagtcctctaactaaaaattgatttatttcggtcttctaagtttct 21969721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 21992070 - 21992157
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||||| ||||||||||||||||| || | |||| |||||||||||||||||||||||||||||||| |||||||||||    
T  21992070 aattacctttttggtcctctaactatttaattggtaacagattagtcctctaactaaaaattgatttatttcggtcttctaagtttct 21992157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 16931605 - 16931698
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaatt-gatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||||| |||||||||||||||| | || ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16931605 aggctaaattacatttttggtcctctaactatttaatttggta-cggattggtgctctaactaaaaattgatttatttcggtcctctaagtttct 16931698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 4773693 - 4773600
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||| |  |||||||| ||||||||||||||||| |||| ||||| |||||||||||||||||||||||||| |||| |||||||||||    
T  4773693 aggcttaatcatctttttggtcctctaactatttaattggtatcagattgatcctctaactaaaaattgatttattttggtcttctaagtttct 4773600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 11256102 - 11256195
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||| ||||| || ||||||||||||||||| |||||||||| ||||||||||||||| | |||||||||| |||| |||||||||    
T  11256102 aggcttaattacctttttagtcctctaactatttaattggtatcggattgatcctctaactaaaaaataatttatttcgatcctttaagtttct 11256195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 265 - 387
Target Start/End: Original strand, 15986247 - 15986379
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 354  Q
    |||||| | ||||||||||||||||| ||||||||| |||| ||| |||||||||||||||||||||||||||||||||          || ||||||||    
T  15986247 tttttgatcctctaactatttaattggtatcggattagtcccctagctaaaaattgatttatttcggtcctctaagtttctcaccgttactgcatttagt 15986346  T
Q  355 ccttcctgttaattttattcaaataagtgttag 387  Q
    |||| |||||| |||||||||||||| ||||||    
T  15986347 cctttctgttagttttattcaaataaatgttag 15986379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 251 - 380
Target Start/End: Original strand, 22151843 - 22151982
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------- 343  Q
    |||||| |||||| |||||||| || |||||||||||||| || | |||| |||||||||||||||||||||||||||||||  |||||||||           
T  22151843 aaggctaaattacatttttggtcctataactatttaattggtaacagattagtcctctaactaaaaattgatttatttcggttttctaagtttctcaccg 22151942  T
Q  344 ---ctacatttagtccttcctgttaattttattcaaataa 380  Q
       |||||||||||||||  ||||||||||||||||||||    
T  22151943 ttactacatttagtcctttttgttaattttattcaaataa 22151982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 258 - 345
Target Start/End: Complemental strand, 41835371 - 41835284
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||||| ||||||||||||||||||||| | ||| || || ||| ||||||||||||||||||||||||||||||||||    
T  41835371 aattacctttttggtcctctaactatttaattgatattgaattagttctttaattaaaaattgatttatttcggtcctctaagtttct 41835284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 387
Target Start/End: Original strand, 47303018 - 47303163
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    ||||||||||||||||||| |  |||||||||||||||| ||| | ||  ||||||||| |||||||| |||||||||||||||||||||||            
T  47303018 aggcttaattacttttttgatcatctaactatttaattggtattgaatcagtcctctaattaaaaattaatttatttcggtcctctaagtttctcaccgt 47303117  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataagtgttag 387  Q
      |||||||||||| || |||||| |||||||||||||| ||||||    
T  47303118 tactacatttagtcatttctgttagttttattcaaataaatgttag 47303163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 22152298 - 22152203
Alignment:
Q  252 aggcttaattacttttttggtactctaactat--ttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||| |||||||| ||||||||||  ||| ||| |||| ||||| ||||||||||||||||||||||||||| ||||||| |||||||    
T  22152298 aggcttaattacctttttggtcctctaactatatttagttggtatcagattgatcctctaactaaaaattgatttatttcagtcctctgagtttct 22152203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 54752175 - 54752255
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| ||||||||||||||||| |||  |||||||||| |||||||||||||||||||||||||| | |||||||||    
T  54752175 tttttggtcctctaactatttaattggtataagattggtcctgtaactaaaaattgatttatttcggtcatataagtttct 54752255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 252 - 339
Target Start/End: Complemental strand, 30681868 - 30681781
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    |||||||||||  |||||||| ||||||||||||||||| || | | ||||||||||||||||||| |||||||||| ||||||||||    
T  30681868 aggcttaattatctttttggtcctctaactatttaattggtaacagtttggtcctctaactaaaaaatgatttattttggtcctctaa 30681781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 21970079 - 21969987
Alignment:
Q  255 cttaattacttttttggtactctaactat--ttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||| |||||||| ||||||||||  ||| ||| |||| ||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  21970079 cttaattacatttttggtcctctaactatatttagttggtatcagattggtcctctaactaaaaattcatttatttcagtcctctgagtttct 21969987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 21992515 - 21992423
Alignment:
Q  255 cttaattacttttttggtactctaactat--ttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||| |||||||| ||||||||||  ||| ||| |||| ||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  21992515 cttaattacatttttggtcctctaactatatttagttggtatcagattggtcctctaactaaaaattcatttatttcagtcctctgagtttct 21992423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 41834965 - 41835018
Alignment:
Q  292 tatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41834965 tatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 41835018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 15790691 - 15790755
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttc 329  Q
    ||||||||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  15790691 tttttggtcatctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttc 15790755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 339
Target Start/End: Original strand, 42853245 - 42853331
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    ||||| |||||| |||||||| ||||| ||||||| ||| |||||||||||| |||||||||||||||||||||| | ||||||||||    
T  42853245 aggctaaattacctttttggt-ctctatctatttagttggtatcggattggttctctaactaaaaattgatttatgtgggtcctctaa 42853331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 39951383 - 39951449
Alignment:
Q  279 actatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||||| |||| |||||||||    
T  39951383 actatttaattggtatcggattagtcctctaattaaaaattgatttatttcgatcctttaagtttct 39951449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 15791555 - 15791467
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||  |||||||| ||||||||||||||||| ||||||||     ||||||||||||||||||||||||||||||  |||||||||    
T  15791555 aggctaaattatatttttggtcctctaactatttaattggtatcggat-----ctctaactaaaaattgatttatttcggtcccttaagtttct 15791467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 20963676 - 20963583
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||| | |||||||| |  |||||||||||||  |||||| ||| |||||||||||||| ||||||||||| |||||| |||||||||    
T  20963676 aggcttaattgcctttttggtcccttaactatttaattagtatcggtttgatcctctaactaaaatttgatttattttggtcctttaagtttct 20963583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 46153032 - 46152968
Alignment:
Q  281 tatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| ||| ||||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  46153032 tatttagttggtatcgaattggttctctaactaaaaattgatttatttcggtcctataagtttct 46152968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 387
Target Start/End: Complemental strand, 51509543 - 51509425
Alignment:
Q  278 aactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagtccttcctgttaat 367  Q
    ||||||||||||| ||| ||||| ||| |||||||||||||||||||||||||||| |||||||||          |||||||||||| || |||||| |    
T  51509543 aactatttaattggtattggattagtc-tctaactaaaaattgatttatttcggtcatctaagtttctcactgttactacatttagtcttttctgttagt 51509445  T
Q  368 tttattcaaataagtgttag 387  Q
    ||||||||||||| ||||||    
T  51509444 tttattcaaataaatgttag 51509425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 252 - 339
Target Start/End: Original strand, 30681028 - 30681115
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    |||||||||||| ||||||||  |||||||||||||||| || ||| ||||| |||||||||||||   |||||||| ||||||||||    
T  30681028 aggcttaattacatttttggtcatctaactatttaattggtaacggtttggttctctaactaaaaaaatatttattttggtcctctaa 30681115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 258 - 345
Target Start/End: Complemental strand, 43844480 - 43844393
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| ||||||||| || |||||||||||||  |||||| ||||||| ||||||||||||||||||||||  ||||| ||| |||||    
T  43844480 aattatttttttggtcctttaactatttaattagtatcggtttggtcccctaactaaaaattgatttatttttgtcctttaaatttct 43844393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 36989124 - 36989322
Alignment:
Q  19 gtctcaagttaattaaagtttcttacaaaagcttccaatatttcaatcttagttacgaaaatgtgccacaaactcaataacaaccacgaagtctcaaata 118  Q
    ||||||||||||||||||||||||||||||| ||||   |||||||| |||| ||| ||||||||||  ||| | || |  |      || | |||||||    
T  36989124 gtctcaagttaattaaagtttcttacaaaagattcc---atttcaattttaggtaccaaaatgtgccctaaatttaaaagta------aaatttcaaata 36989214  T
Q  119 aattgacatc-tag-----ctaccattcaatttcaatctacattactagcttgtggaaggtct--------tacgttactaaacaagtcttaatattgca 204  Q
    |||||||||| |||     |||||||||||||||||||||||||| |||||||||||||| ||        |  ||||||||||||||||||||||||||    
T  36989215 aattgacatcttagctaccctaccattcaatttcaatctacattaatagcttgtggaaggccttttaagtctgagttactaaacaagtcttaatattgca 36989314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 37014563 - 37014761
Alignment:
Q  19 gtctcaagttaattaaagtttcttacaaaagcttccaatatttcaatcttagttacgaaaatgtgccacaaactcaataacaaccacgaagtctcaaata 118  Q
    ||||||||||||||||||||||||||||||| ||||   |||||||| |||| ||| ||||||||||  ||| | || |  |      || | |||||||    
T  37014563 gtctcaagttaattaaagtttcttacaaaagattcc---atttcaattttaggtaccaaaatgtgccctaaatttaaaagta------aaatttcaaata 37014653  T
Q  119 aattgacatc-tag-----ctaccattcaatttcaatctacattactagcttgtggaaggtct--------tacgttactaaacaagtcttaatattgca 204  Q
    |||||||||| |||     |||||||||||||||||||||||||| |||||||||||||| ||        |  ||||||||||||||||||||||||||    
T  37014654 aattgacatcttagctaccctaccattcaatttcaatctacattaatagcttgtggaaggccttttaagtctgagttactaaacaagtcttaatattgca 37014753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 450
Target Start/End: Original strand, 36989560 - 36989623
Alignment:
Q  387 gtttttgcttgatttcagcgtccttttcaacatattgtttggtcttagcacaaatttacggcat 450  Q
    |||||||||||||||||| |   ||||| |||||||||||||||||||||||||| ||||||||    
T  36989560 gtttttgcttgatttcagtgatgttttctacatattgtttggtcttagcacaaatctacggcat 36989623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 450
Target Start/End: Original strand, 37015000 - 37015063
Alignment:
Q  387 gtttttgcttgatttcagcgtccttttcaacatattgtttggtcttagcacaaatttacggcat 450  Q
    |||||||||||||||||| |   ||||| |||||||||||||||||||||||||| ||||||||    
T  37015000 gtttttgcttgatttcagtgctgttttctacatattgtttggtcttagcacaaatctacggcat 37015063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 43839984 - 43840041
Alignment:
Q  277 taactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcc 334  Q
    |||||||||||||  |||||| ||| |||||||||||||||||||||||||| |||||    
T  43839984 taactatttaattagtatcggtttgatcctctaactaaaaattgatttattttggtcc 43840041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 13867026 - 13866969
Alignment:
Q  277 taactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcc 334  Q
    |||||||||||||  |||||| ||||||| |||||||||| ||||||||||| |||||    
T  13867026 taactatttaattagtatcggtttggtcccctaactaaaatttgatttattttggtcc 13866969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 49529182 - 49529125
Alignment:
Q  277 taactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcc 334  Q
    |||||||||||||  |||||| ||||||| |||||||||| ||||||||||| |||||    
T  49529182 taactatttaattagtatcggtttggtcccctaactaaaatttgatttattttggtcc 49529125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 441
Target Start/End: Original strand, 27006571 - 27006622
Alignment:
Q  390 tttgcttgatttcagcgtccttttcaacatattgtttggtcttagcacaaat 441  Q
    ||||||||||||||||||| |||||| || |||||||||| | |||||||||    
T  27006571 tttgcttgatttcagcgtcgttttcatcacattgtttggtatcagcacaaat 27006622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 441
Target Start/End: Original strand, 39160883 - 39160934
Alignment:
Q  390 tttgcttgatttcagcgtccttttcaacatattgtttggtcttagcacaaat 441  Q
    ||||||||||||||| ||| |||||||||  || ||||||||||||||||||    
T  39160883 tttgcttgatttcagtgtcattttcaacacgttttttggtcttagcacaaat 39160934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 36989348 - 36989406
Alignment:
Q  194 ttaatattgcatttaactttgtttattttatcatgtactttatcatatcaaacatttaa 252  Q
    ||||| ||||||| |||||||||||| | || |||||||| ||||||| ||||||||||    
T  36989348 ttaatgttgcattgaactttgtttatatcattatgtacttaatcatatgaaacatttaa 36989406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 37014787 - 37014845
Alignment:
Q  194 ttaatattgcatttaactttgtttattttatcatgtactttatcatatcaaacatttaa 252  Q
    ||||| ||||||| |||||||||||| | || |||||||| ||||||| ||||||||||    
T  37014787 ttaatgttgcattgaactttgtttatatcattatgtacttaatcatatgaaacatttaa 37014845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 441
Target Start/End: Complemental strand, 36874881 - 36874825
Alignment:
Q  385 tagtttttgcttgatttcagcgtccttttcaacatattgtttggtcttagcacaaat 441  Q
    |||| ||||||||||||||| ||| |||||||||  ||||||||||| || ||||||    
T  36874881 tagtgtttgcttgatttcagtgtcgttttcaacacgttgtttggtctcagaacaaat 36874825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 380
Target Start/End: Complemental strand, 39241707 - 39241671
Alignment:
Q  344 ctacatttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  39241707 ctacatttagtcctttctgttagttttattcaaataa 39241671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 328
Target Start/End: Original strand, 44316626 - 44316702
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttattt 328  Q
    ||||| |||| | |||||||| |  |||||||||||||  |||||| || |||| |||||||||| |||||||||||    
T  44316626 aggctaaattgcatttttggtcccttaactatttaattagtatcggtttagtcccctaactaaaatttgatttattt 44316702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 253 - 380
Target Start/End: Complemental strand, 24612 - 24475
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||             
T  24612 ggcttaattacatttttggtactctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcactgtt 24513  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     |||||||||||| || |||||||||||||||||||||    
T  24512 actacatttagtcatttctgttaattttattcaaataa 24475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 24161 - 24254
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||||| ||||||||||||| ||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24161 aggctaaattacctttttggtcctctaactatttagttggtattgaattggtcctctaactaaaaattgatttatttcgatcctctaagtttct 24254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 72760 - 72854
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  72760 aaggcttaattacctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 72854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 252 - 380
Target Start/End: Complemental strand, 73212 - 73074
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    |||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||            
T  73212 aggcttaattacatttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcaccgt 73113  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||| |||||| ||||||||||||||    
T  73112 tactacatttagtcctttctgttagttttattcaaataa 73074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 1e-36; HSPs: 66)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 3423168 - 3423262
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||||  ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3423168 aaggcttaattaccattttggttctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 3423262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 2517452 - 2517360
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2517452 ggcttaattacctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 2517360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 255 - 380
Target Start/End: Complemental strand, 32753621 - 32753486
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------c 344  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||          |    
T  32753621 cttaattacctttttggtcctctaactatttaattggtatcggattgatcctctaactaaaaattgatttatttcggtcctctaagtttctcactgttac 32753522  T
Q  345 tacatttagtccttcctgttaattttattcaaataa 380  Q
    |||||||||||||| |||||| ||||||||||||||    
T  32753521 tacatttagtcctttctgttagttttattcaaataa 32753486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 6236369 - 6236278
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttcta 346  Q
    |||||||||||||||||| | |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6236369 cttaattacttttttggtcccctaactatttaattgatatttgattggtcctctaactaaaaattgatttatttcggtcctctaagtttcta 6236278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 252 - 380
Target Start/End: Original strand, 21856554 - 21856692
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    |||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||            
T  21856554 aggcttaattacatttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcaccgt 21856653  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||| |||||| ||||||||||||||    
T  21856654 tactacatttagtcctttctgttagttttattcaaataa 21856692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 6137825 - 6137735
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6137825 cttaattacctttttggtcctctaactatttaattggtatcggattggtcctttaactaaaaattgatttatttcggtcctctaagtttct 6137735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 9046538 - 9046444
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9046538 aaggcttaattacctttttggtcctctaactatttaattggtattggattggtcctctaactaaaaattgatttatttcggtccgctaagtttct 9046444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 34891095 - 34891002
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34891095 aaggcttaattacttttt-ggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 34891002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 253 - 387
Target Start/End: Original strand, 9046086 - 9046230
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    |||| ||||||||||||||| ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||             
T  9046086 ggctaaattacttttttggtcctctaactatttaattggtatcagattggtcctctaagtaaaaattgatttatttcggtcctctaagtttgtcaccgtt 9046185  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataagtgttag 387  Q
     |||||||||||| || |||||| |||||||||||||| ||||||    
T  9046186 actacatttagtcttttctgttagttttattcaaataaatgttag 9046230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 18052955 - 18053048
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| ||||||||||||| | || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18052955 aggctaaattacttttttgatcctttaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 18053048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 255 - 380
Target Start/End: Complemental strand, 15933004 - 15932869
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------c 344  Q
    ||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||          |    
T  15933004 cttaattacatttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcaccgttac 15932905  T
Q  345 tacatttagtccttcctgttaattttattcaaataa 380  Q
    |||||||||||||| |||||| ||||||||||||||    
T  15932904 tacatttagtcctttctgttagttttattcaaataa 15932869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 35167490 - 35167582
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35167490 ggcttaattacctttttggtcctctaactatttagttggtatcggattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 35167582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 2517007 - 2517094
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2517007 aattacatttttggtcctctaactatttaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 2517094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 252 - 380
Target Start/End: Complemental strand, 32993466 - 32993328
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa----------gt 341  Q
    ||||| |||||  |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||          ||    
T  32993466 aggctaaattatatttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctataagtttctcaccgt 32993367  T
Q  342 ttctacatttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  32993366 ttctacatttagtcctttctgttagttttattcaaataa 32993328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 978413 - 978507
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||| |||||||| ||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  978413 aaggcttaattacatttttggtcctctaactatttagttggtatcgtattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 978507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 253 - 343
Target Start/End: Original strand, 17244664 - 17244754
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  17244664 ggcttaattacctttttggtcctctaactatttaattggtatcggtttggtcctctaactaaaaattgatttattttggtcctctaagttt 17244754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 34517270 - 34517364
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| ||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  34517270 aaggctaaattacttttttggtcctctaactatttaattggtgtcggattggtcctctaactaaaaattgatttatttcggtcccttaagtttct 34517364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 258 - 380
Target Start/End: Complemental strand, 5938258 - 5938126
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctac 347  Q
    |||||| ||||||||  ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||    
T  5938258 aattacctttttggtcatctaattatttaattggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcacaattactac 5938159  T
Q  348 atttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||| |||||| ||||||||||||||    
T  5938158 atttagtcctttctgttagttttattcaaataa 5938126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 6137378 - 6137470
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  6137378 aggcttaattacctttttggtcctctaactatttaattggtatcggattggtcctctaattaaaaa-tgatttatttcggtcctctaagtttct 6137470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 18053404 - 18053311
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||| |||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18053404 aggcttagttacctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtactctaagtttct 18053311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 34994383 - 34994472
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| |||||||| || |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34994383 ttaattacctttttggtcctttaactatttaattggtattggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 34994472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 249 - 345
Target Start/End: Original strand, 5937809 - 5937905
Alignment:
Q  249 ttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||||| |||||||| ||||||||||||||||| |||| ||||| | |||||||||||||||||||||||||||||||||||||||||    
T  5937809 ttaaggtttaattacctttttggtcctctaactatttaattggtatcagattgattctctaactaaaaattgatttatttcggtcctctaagtttct 5937905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 255 - 380
Target Start/End: Original strand, 25176665 - 25176800
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------c 344  Q
    ||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||          |    
T  25176665 cttaattacatttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattatggtcctctaagtttctcaccgttac 25176764  T
Q  345 tacatttagtccttcctgttaattttattcaaataa 380  Q
    |||||||||||||| |||||| ||||||||||||||    
T  25176765 tacatttagtcctttctgttagttttattcaaataa 25176800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 258 - 387
Target Start/End: Original strand, 31237751 - 31237890
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctac 347  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||| |||||||||          ||||    
T  31237751 aattacttttttggtcctctaactatttaattggtatcggattagttctctaactaaaaattgatttatttcggtcttctaagtttctcaccgttactac 31237850  T
Q  348 atttagtccttcctgttaattttattcaaataagtgttag 387  Q
    |||||||| || |||||| |||||||||||||| ||||||    
T  31237851 atttagtcatttctgttagttttattcaaataaatgttag 31237890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 252 - 380
Target Start/End: Complemental strand, 21857006 - 21856868
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    ||||| |||||| |||||||| |||||| |||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||            
T  21857006 aggctaaattacctttttggtcctctaagtatttagttggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagtttctcaccgt 21856907  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||| |||||| ||||||||||||||    
T  21856906 tactacatttagtcctttctgttagttttattcaaataa 21856868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 15932728 - 15932822
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  15932728 aaggctaaattacctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttattttgatcctctaagtttct 15932822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 7269950 - 7270043
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| ||||||||||||  | ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7269950 aggctaaattacttttttaatcctctaactatttaattggtattggattggtcctctaactaaaaattgatttatttcggttctctaagtttct 7270043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 7271080 - 7270987
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||| | |||||||| ||||||||||||||||| |||| |||| |||||||||||||||||||||||||||| |||||||||||||||    
T  7271080 aggcttaattgcctttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgatttatttcagtcctctaagtttct 7270987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 249 - 345
Target Start/End: Complemental strand, 5311280 - 5311184
Alignment:
Q  249 ttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||| |||| |||||||| ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5311280 ttaagccttagttacctttttggtcctctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcggtgctctaagtttct 5311184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 32753177 - 32753269
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| |||||||| ||||||||||||||||  |||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32753177 ggctaaattacatttttggtcctctaactatttaattagtatcagattgatcctctaactaaaaattgatttatttcggtcctctaagtttct 32753269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 31247121 - 31247208
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||  |||||||||||    
T  31247121 aattacttttttggtcctctaactatttaattggtatcggattagttctctaactaaaaattgatttatttcggtgttctaagtttct 31247208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 7438802 - 7438896
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||  |||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  7438802 aaggctaaattatctttttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcccttaagtttct 7438896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 387
Target Start/End: Original strand, 5310838 - 5310970
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 354  Q
    |||||||| |||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||| |||||||||          |||||||||||    
T  5310838 tttttggtcctctaactatttaattgatatcagagtagtcctataactaaaaattgatttatttcggtcatctaagtttctcactgttactacatttagt 5310937  T
Q  355 ccttcctgttaattttattcaaataagtgttag 387  Q
    |||| |||||| |||||||||||||| ||||||    
T  5310938 cctttctgttagttttattcaaataaatgttag 5310970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 6235920 - 6236013
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||||| ||||||||||||||||| |||| |||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  6235920 aggctaaattacctttttggtcctctaactatttaattggtatcagattagtcctataattaaaaattgatttatttcggtcctctaagtttct 6236013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 14276402 - 14276491
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| |||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  14276402 ttaattacctttttggtcctctacctatttaattggtatcggattgatcctctaactaaaaattgatttacttcggtcctctaaatttct 14276491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 34890643 - 34890736
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||| | ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  34890643 aggctaaattacctttttgttcctctaactatttaattggtattggattggtcctctaactaaaaattgatttattttggtcctcaaagtttct 34890736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 6532192 - 6532284
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| ||||| || ||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||| |||||| |||||    
T  6532192 ggcttaattaccttttttgtcctctaactatttaatttgtatcggattgatcctctaactaaaaattgatttatttcggttctctaaatttct 6532284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 251 - 343
Target Start/End: Original strand, 26600355 - 26600447
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    |||||| |||||  |||||||| ||||||||||| ||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  26600355 aaggctaaattatctttttggtcctctaactattaaattggtatcggattagtcctctaactaaaaattaatttatttcggtcctctaagttt 26600447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 253 - 337
Target Start/End: Complemental strand, 31238196 - 31238113
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctct 337  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  31238196 ggcttaattacctttttggtcctctaactatttagttggtatcggattggt-ctctaactaaaaattgatttatttcggtcctct 31238113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 253 - 337
Target Start/End: Complemental strand, 31247566 - 31247482
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctct 337  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  31247566 ggcttaattacctttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattaatttatttcagtcctct 31247482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 34518142 - 34518050
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| |||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||  |||||||||    
T  34518142 ggctaaattacctttttggtcctctaactatttaattggtatcggattggtcctcaaactaaaaattgatttatttcgatcccttaagtttct 34518050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 345
Target Start/End: Complemental strand, 5639618 - 5639531
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||| |  |||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  5639618 aattacatttttgatcttctaactatttaattggtatcggattagtcctctaactaaaaatttatttatttcggtcctctaagtttct 5639531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 21540430 - 21540335
Alignment:
Q  251 aaggcttaattac-ttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||| ||||||||| || |||||||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  21540430 aaggctaaattaccttttttggtcctttaactatttaattggtatcagattagtcctctaattaaaaattgatttatttcggtcctctaagtttct 21540335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 274 - 344
Target Start/End: Original strand, 24744349 - 24744419
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttc 344  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  24744349 ctctaactatttaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaactttc 24744419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 253 - 380
Target Start/End: Complemental strand, 26957411 - 26957274
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt--------- 343  Q
    ||||||||||  ||||||||  |||||||||||||||| |||  |||||||||| |||||||||||||||||||||||||||| |||||||             
T  26957411 ggcttaattatctttttggtcatctaactatttaattggtattagattggtcctttaactaaaaattgatttatttcggtcctttaagtttttcaccgtt 26957312  T
Q  344 -ctacatttagtccttcctgttaattttattcaaataa 380  Q
     ||||||||||||||| |||||| ||||||||||||||    
T  26957311 actacatttagtcctttctgttagttttattcaaataa 26957274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 247 - 345
Target Start/End: Complemental strand, 34994836 - 34994738
Alignment:
Q  247 atttaaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||| |||||| ||||| ||  |||||||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34994836 atttatggctaaattacctttttagtcatctaactatttaattggtattagattggtcctctaactaaaaattgatttatttcgatcctctaagtttct 34994738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 251 - 332
Target Start/End: Complemental strand, 25180300 - 25180219
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggt 332  Q
    |||||| |||||| ||| |||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  25180300 aaggctaaattacctttctggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggt 25180219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 264 - 345
Target Start/End: Complemental strand, 26600786 - 26600705
Alignment:
Q  264 ttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| || ||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26600786 tttttttgtcctctaactatttagttggtattggattggtcttctaactaaaaattgatttatttcggtcctctaagtttct 26600705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 253 - 343
Target Start/End: Original strand, 6228730 - 6228819
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    ||||||||||| ||||| || |||||| |||||||||| |||||| |||||||||||||||||||||||||||||| ||||| ||||||||    
T  6228730 ggcttaattacctttttagtcctctaattatttaattggtatcggtttggtcctctaactaaaaattgatttattttggtcc-ctaagttt 6228819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 10412949 - 10412859
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||  ||||||||  | |||||||||| ||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  10412949 cttaattatctttttggtcttttaactatttagttggtatcggattagttctctaactaaaaattgatttatttcggtcctctaagtttct 10412859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 345
Target Start/End: Original strand, 32993017 - 32993107
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||| || ||||| ||||||||||||||||| |||  |||||||| ||||| ||||||||||||||||| ||||||||||||||||    
T  32993017 cttaattaccttcttggtcctctaactatttaattggtattagattggtcatctaagtaaaaattgatttattttggtcctctaagtttct 32993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 29260536 - 29260623
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| ||| |||| ||||||||||||||||| |||| ||||||||||| ||||||||||| ||||||||||||||  |||||||||    
T  29260536 aattacctttctggtcctctaactatttaattggtatcagattggtcctcaaactaaaaattaatttatttcggtcccttaagtttct 29260623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 29261403 - 29261309
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||  ||||| || ||||||||||||||||| |||  |||||||||||||||||||||||||||||| |||||||  |||||||||    
T  29261403 aaggctaaattatatttttagtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttatgtcggtcccttaagtttct 29261309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 252 - 325
Target Start/End: Complemental strand, 35167906 - 35167833
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgattta 325  Q
    ||||| |||||| |||||||| ||||||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  35167906 aggctaaattacatttttggtcctctaactatttaattggtatcagattagtcctctaactaaaaattgattta 35167833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 380
Target Start/End: Complemental strand, 7270404 - 7270266
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa----------gt 341  Q
    |||||||||||  |||||||| || |||||||||||||| ||||| |||| ||||||||||||||||| |||| ||| ||| ||||||          ||    
T  7270404 aggcttaattatctttttggtcctttaactatttaattggtatcgaattgatcctctaactaaaaattaattttttttggttctctaaatttctcatcgt 7270305  T
Q  342 ttctacatttagtccttcctgttaattttattcaaataa 380  Q
    | |||||||||||| || |||||||||||||||||||||    
T  7270304 tactacatttagtcttttctgttaattttattcaaataa 7270266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 329
Target Start/End: Original strand, 15286350 - 15286421
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttc 329  Q
    |||||| |||||| | ||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||    
T  15286350 aattacctttttgatcctctaactatttaattggtgtcggattggtcctctgactaaaaattgatttatttc 15286421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 26956967 - 26957054
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||| ||||| || ||| |||||||||||||||||||| |       |||||||||||||||||||||||||||||||||||||||    
T  26956967 aaggctaaattacattttttgtcctccaactatttaattgatatcggtt-------ctaactaaaaattgatttatttcggtcctctaagtttct 26957054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 3035926 - 3035972
Alignment:
Q  299 ttggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  3035926 ttggtcttctaactaaaaattgatttatttcggtcctctaagtttct 3035972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 24744770 - 24744695
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttc 329  Q
    ||||||||||  |||||||| ||||||||||||| ||| |||   ||||||||||||||||||||||||||||||||    
T  24744770 ggcttaattatctttttggtcctctaactatttagttggtatta-attggtcctctaactaaaaattgatttatttc 24744695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 27829414 - 27829329
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaa 339  Q
    ||||||||||| |||| ||| ||| ||||||||||||| || | | |||||||||||| |||||| |||||||||| ||||||||||    
T  27829414 ggcttaattacctttt-ggtcctccaactatttaattggtaacagtttggtcctctaattaaaaaatgatttattttggtcctctaa 27829329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 34251552 - 34251644
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||| |||||  | |||||| |||||| ||| ||||||||| |||||   |||||||||| |||||||||| ||||||||||||||    
T  34251552 aaggctaaattacctttttaatcctctaattatttagttggtatcggattagtcctg--actaaaaattaatttatttcgatcctctaagtttct 34251644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 7270665 - 7270721
Alignment:
Q  289 tgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| ||||||||||||||| ||||||||||||||||| | || | |||||||||    
T  7270665 tgatattggattggtcctctaattaaaaattgatttattttgatcttttaagtttct 7270721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 334
Target Start/End: Complemental strand, 17245712 - 17245629
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcc 334  Q
    |||||| |||| | |||||||| |  ||| |||||||||  |||||| ||||||| |||||||||| ||||||||||| |||||    
T  17245712 aaggctaaattgcatttttggtcccttaattatttaattagtatcggtttggtcccctaactaaaatttgatttattttggtcc 17245629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 345
Target Start/End: Complemental strand, 3423574 - 3423528
Alignment:
Q  299 ttggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||| |||| ||||||||| |||||||||||||||||| |||||    
T  3423574 ttggtccgctaattaaaaattggtttatttcggtcctctaattttct 3423528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 6229748 - 6229692
Alignment:
Q  277 taactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcc 334  Q
    |||||||||||||  |||||| ||||||| |||||||||| ||||||||||| |||||    
T  6229748 taactatttaattagtatcggtttggtcc-ctaactaaaatttgatttattttggtcc 6229692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 380
Target Start/End: Complemental strand, 25177006 - 25176970
Alignment:
Q  344 ctacatttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  25177006 ctacatttagtcctttctgttagttttattcaaataa 25176970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 252 - 380
Target Start/End: Original strand, 20750 - 20888
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    |||||||||||| ||||||||  |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  20750 aggcttaattacatttttggtcatctaactatttagttggtatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttcacactgt 20849  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||| |||||| ||||||||||||||    
T  20850 tactacatttagtcctttctgttagttttattcaaataa 20888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 76; Significance: 6e-35; HSPs: 2)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 252 - 380
Target Start/End: Complemental strand, 14586 - 14448
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    ||||| |||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||            
T  14586 aggctaaattacctttttggtcctctaactatttaattgatatcggattgatcctctaactaaaaattgatttatttcggtcctctatgtttctcaccgt 14487  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||| |||||| ||||||||||||||    
T  14486 tactacatttagtcctttctgttagttttattcaaataa 14448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 250 - 380
Target Start/End: Original strand, 14132 - 14272
Alignment:
Q  250 taaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt------ 343  Q
    |||||||||||||| | |||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||          
T  14132 taaggcttaattacctgtttggtcctctaactatttaattggtatcagattggtcctctaactaaaaattgatttatttcggtcctttaagtttctcacc 14231  T
Q  344 ----ctacatttagtccttcctgttaattttattcaaataa 380  Q
        ||||||||||||||| |||||| ||||||||||||||    
T  14232 gttactacatttagtcctttctgttagttttattcaaataa 14272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 74; Significance: 1e-33; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 251 - 387
Target Start/End: Complemental strand, 349524 - 349379
Alignment:
Q  251 aaggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaag---------t 341  Q
    |||||||| |||| |||||||| | ||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||         |    
T  349524 aaggcttagttacctttttggtcccctaactatttagttggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagttctcacttt 349425  T
Q  342 ttctacatttagtccttcctgttaattttattcaaataagtgttag 387  Q
    | ||||||||||||||| ||||||||||||||||||||| ||||||    
T  349424 tactacatttagtcctttctgttaattttattcaaataaatgttag 349379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 252 - 343
Target Start/End: Original strand, 113392 - 113483
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    ||||| ||| || |||||||| |||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  113392 aggctaaataacatttttggtcctctaactgtttaattggtatccgattggtcctctaactaaaaattgatttatttcggtcctctaagttt 113483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 113816 - 113724
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| |||||||| |||||||||||||| || |||| |||||||||| ||||||||||||||||| |||||||| ||||| |||||    
T  113816 ggcttaattacatttttggtcctctaactatttaagtgctatcagattggtcctgtaactaaaaattgatttctttcggtcatctaaatttct 113724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 345
Target Start/End: Original strand, 349084 - 349165
Alignment:
Q  264 ttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| || ||||||||||||||||  |||  |||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  349084 tttttttgtcctctaactatttaattagtattagattagtcctctaactaaaaattgatttatttcgatcctctaagtttct 349165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 73; Significance: 4e-33; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 15898 - 15806
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||||||||| | |||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15898 ggcttaattacttttttgatcctctaactatttaactggtatcggattggtcatctaactaaaaattgatttatttcggtcctctaagtttct 15806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 15474 - 15545
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||| ||||| |||||||||| |||||||| ||||||||||||||||| |||| | |||||||||    
T  15474 ctctaactattcaattggtatcggattgatcctctaattaaaaattgatttattttggtcatttaagtttct 15545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 72; Significance: 2e-32; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 252 - 380
Target Start/End: Original strand, 45755 - 45893
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    ||||| ||||||| ||||||| |||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  45755 aggctaaattactattttggtcctctaattatttaattggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaagtttctcacggt 45854  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||| |||||| ||||||||||||||    
T  45855 tactacatttagtcctttctgttagttttattcaaataa 45893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 56565 - 56494
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||| ||| |||  |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  56565 ctctaactatttagttggtatttgattggtcatctaactaaaaattgatttatttcggtcctctaagtttct 56494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 63690 - 63619
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||| ||| |||  |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  63690 ctctaactatttagttggtatttgattggtcatctaactaaaaattgatttatttcggtcctctaagtttct 63619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 257 - 345
Target Start/End: Complemental strand, 8874 - 8786
Alignment:
Q  257 taattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  || ||||||||||||    
T  8874 taattacttttttggtcctctaactatttaattggtatcggattggtcctctaactaaaaattgatttatttatgttctctaagtttct 8786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 8428 - 8520
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| |||||| |||||||| ||||||||||||||||| |||| ||||| | || ||||||||||||||||||||||| |||| |||||||||    
T  8428 aggctaaattacctttttggtcctctaactatttaattggtatcagattgat-ctttaactaaaaattgatttatttcgatcctttaagtttct 8520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 68; Significance: 4e-30; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 252 - 380
Target Start/End: Original strand, 81857 - 81995
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt-------- 343  Q
    |||||||||||  |||||| | ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||            
T  81857 aggcttaattatctttttgatcctctaactatttatttggtatcagattggtcctctaactaaaaattgatttatttcggtcctctaagtttctcactgt 81956  T
Q  344 --ctacatttagtccttcctgttaattttattcaaataa 380  Q
      ||||||||||||||| |||||| ||||||||||||||    
T  81957 tactacatttagtcctttctgttagttttattcaaataa 81995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 90876 - 90796
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||| || ||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  90876 tttttcgtcctctaactatttagttggtatcggattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 90796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 380
Target Start/End: Complemental strand, 82207 - 82171
Alignment:
Q  344 ctacatttagtccttcctgttaattttattcaaataa 380  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  82207 ctacatttagtcctttctgttagttttattcaaataa 82171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 253 - 343
Target Start/End: Complemental strand, 18723 - 18633
Alignment:
Q  253 ggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt 343  Q
    ||||||||||| |||||||| || ||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18723 ggcttaattacatttttggtcctttaattatttaattggtatcggattggtcctctaactaaaaattgatttattttggtcctctaagttt 18633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 265 - 380
Target Start/End: Original strand, 18285 - 18410
Alignment:
Q  265 tttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------ctacatttagt 354  Q
    |||||||| ||||||||||||||||| |||  |||||||||||||||||||||||||||||||| |||| |||||||||          |||||||||||    
T  18285 tttttggtcctctaactatttaattggtattagattggtcctctaactaaaaattgatttatttaggtcttctaagtttctcaccgctactacatttagt 18384  T
Q  355 ccttcctgttaattttattcaaataa 380  Q
    |||| |||||| ||||||||||||||    
T  18385 cctttctgttagttttattcaaataa 18410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 255 - 380
Target Start/End: Original strand, 50478 - 50613
Alignment:
Q  255 cttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagttt----------c 344  Q
    ||||||||  |||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||          |    
T  50478 cttaattatctttttggtcctctacctatttaattggtatctgattggtcctctaactaaaaattgatttatttcggtcctttaagtttctcaccgttac 50577  T
Q  345 tacatttagtccttcctgttaattttattcaaataa 380  Q
    |||||||||||||| |||||| ||||||||||||||    
T  50578 tacatttagtcctttctgttatttttattcaaataa 50613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 50927 - 50834
Alignment:
Q  253 ggcttaattacttttttggtactctaactattt-aattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||| |||||| |||||||| |||||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  50927 ggctaaattacatttttggtcctctaactattttaattggtatcagattgatcctctaactaaaaattgatttatttcggtcttctaagtttct 50834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 64; Significance: 9e-28; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 19713 - 19800
Alignment:
Q  258 aattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| |||||||| ||||||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19713 aattacctttttggtcctctaactatttagttggtattggattagtcctctaactaaaaattgatttatttcggtcctctaagtttct 19800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 256 - 345
Target Start/End: Complemental strand, 20155 - 20066
Alignment:
Q  256 ttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||  |||  |||||||||||||||    
T  20155 ttaattacatttttggtcctctaactatttagttggtatcggattggtcctctaactaaaaattgattattttttgtcctctaagtttct 20066  T

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Target: scaffold0225 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 252 - 346
Target Start/End: Original strand, 9781 - 9875
Alignment:
Q  252 aggcttaattacttttttggtactctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttcta 346  Q
    |||||||||| | |||||||| |  |||||||||||||| |||||| ||| |||||||||||||| ||||||||||| |||||| ||||||||||    
T  9781 aggcttaattgcctttttggtcccttaactatttaattggtatcggtttgctcctctaactaaaatttgatttattttggtcctttaagtttcta 9875  T

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Target: scaffold0225; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 10982 - 10914
Alignment:
Q  277 taactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||||||  |||||| ||||||| |||||||||| ||||||||||| |||||  |||||||||    
T  10982 taactatttaattagtatcggtttggtcccctaactaaaatttgatttattttggtcccttaagtttct 10914  T

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Target: scaffold0246 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 6420 - 6353
Alignment:
Q  277 taactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||| ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  6420 taactaattaattggtatcgtattggtcctctaactaaaaattga-ttatttcggtcctctaagtttct 6353  T

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Target: scaffold0246; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 6044 - 6090
Alignment:
Q  299 ttggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  6044 ttggtcctctaactaaaaattgatttatttcggtcttctaagtttct 6090  T

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Target: scaffold0260 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 14231 - 14283
Alignment:
Q  292 tatcggattggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14231 tatcggattggtc-tctaactaaaaattgatttatttcggtcctctaagtttct 14283  T

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Target: scaffold0001 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 144041 - 144101
Alignment:
Q  274 ctctaactatttaattgatatcggattggtcctctaactaaaaattgatttatttcggtcc 334  Q
    ||||||||||||||||| ||||  |||||| ||||||||||||||||||||||||||||||    
T  144041 ctctaactatttaattggtatcatattggttctctaactaaaaattgatttatttcggtcc 144101  T

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Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 147245 - 147198
Alignment:
Q  298 attggtcctctaactaaaaattgatttatttcggtcctctaagtttct 345  Q
    |||||||||| ||||||||||||||||||||||||||  |||||||||    
T  147245 attggtcctcgaactaaaaattgatttatttcggtccgttaagtttct 147198  T

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