View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7693_low_12 (Length: 287)

Name: NF7693_low_12
Description: NF7693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7693_low_12
NF7693_low_12
[»] chr8 (31 HSPs)
chr8 (203-287)||(40918727-40918811)
chr8 (207-287)||(7147110-7147190)
chr8 (207-287)||(40058303-40058383)
chr8 (207-287)||(43275399-43275479)
chr8 (207-287)||(11646325-11646405)
chr8 (207-287)||(30999524-30999604)
chr8 (207-287)||(36068277-36068357)
chr8 (206-287)||(37345768-37345849)
chr8 (207-287)||(2539930-2540010)
chr8 (207-287)||(11174223-11174303)
chr8 (207-287)||(3585648-3585728)
chr8 (207-287)||(27035192-27035272)
chr8 (222-287)||(20546308-20546373)
chr8 (207-285)||(35866812-35866890)
chr8 (207-287)||(28568115-28568195)
chr8 (207-287)||(28575708-28575788)
chr8 (207-287)||(28562618-28562698)
chr8 (204-287)||(45400767-45400850)
chr8 (236-287)||(10180897-10180948)
chr8 (225-287)||(27563885-27563947)
chr8 (22-86)||(6100459-6100523)
chr8 (243-287)||(13880991-13881035)
chr8 (213-287)||(26628822-26628896)
chr8 (29-86)||(18374004-18374061)
chr8 (207-269)||(41305762-41305824)
chr8 (203-245)||(45278716-45278758)
chr8 (17-145)||(14666070-14666199)
chr8 (22-145)||(10535403-10535526)
chr8 (22-86)||(10927593-10927657)
chr8 (18-145)||(14846559-14846686)
chr8 (205-245)||(27034995-27035035)
[»] chr4 (39 HSPs)
chr4 (205-287)||(12071757-12071839)
chr4 (207-287)||(21310618-21310698)
chr4 (207-287)||(14261241-14261321)
chr4 (207-287)||(22321268-22321348)
chr4 (207-287)||(24706247-24706327)
chr4 (207-283)||(25704852-25704928)
chr4 (207-287)||(40122487-40122567)
chr4 (207-287)||(44569034-44569114)
chr4 (209-287)||(21661537-21661615)
chr4 (209-287)||(21670301-21670379)
chr4 (217-287)||(50768059-50768129)
chr4 (207-287)||(20249014-20249094)
chr4 (208-287)||(21064958-21065037)
chr4 (18-143)||(295534-295659)
chr4 (207-287)||(19692919-19692999)
chr4 (207-287)||(19703504-19703584)
chr4 (206-287)||(50839030-50839111)
chr4 (217-287)||(18507276-18507346)
chr4 (207-287)||(32543676-32543756)
chr4 (22-145)||(4736585-4736708)
chr4 (223-286)||(31892430-31892493)
chr4 (214-287)||(6128956-6129029)
chr4 (45-118)||(14859302-14859375)
chr4 (22-145)||(5472847-5472971)
chr4 (34-145)||(14124016-14124128)
chr4 (22-86)||(53599048-53599112)
chr4 (22-146)||(29895775-29895900)
chr4 (22-145)||(20128297-20128421)
chr4 (22-145)||(38166015-38166139)
chr4 (18-81)||(14567943-14568006)
chr4 (25-143)||(21429292-21429411)
chr4 (47-86)||(35359749-35359788)
chr4 (207-242)||(39295418-39295453)
chr4 (18-135)||(8889006-8889123)
chr4 (17-86)||(24850686-24850754)
chr4 (17-118)||(43458596-43458697)
chr4 (22-86)||(1446814-1446878)
chr4 (22-145)||(2559295-2559419)
chr4 (207-243)||(34324618-34324654)
[»] chr7 (29 HSPs)
chr7 (207-287)||(27814008-27814088)
chr7 (207-287)||(36453124-36453204)
chr7 (207-287)||(10981705-10981785)
chr7 (207-287)||(25614353-25614433)
chr7 (207-287)||(47110647-47110727)
chr7 (207-287)||(40349159-40349238)
chr7 (205-287)||(16662290-16662372)
chr7 (205-287)||(17636650-17636732)
chr7 (18-86)||(23823931-23823999)
chr7 (24-86)||(29151928-29151990)
chr7 (22-135)||(4195212-4195325)
chr7 (22-135)||(17748392-17748505)
chr7 (22-102)||(1797446-1797526)
chr7 (236-283)||(27941013-27941060)
chr7 (22-135)||(42210272-42210385)
chr7 (26-86)||(365130-365190)
chr7 (22-145)||(10047875-10047999)
chr7 (22-82)||(16802109-16802169)
chr7 (22-145)||(48804669-48804793)
chr7 (22-86)||(4228813-4228874)
chr7 (207-285)||(16360576-16360653)
chr7 (22-124)||(22973953-22974055)
chr7 (242-287)||(3091710-3091755)
chr7 (242-287)||(24456800-24456845)
chr7 (25-86)||(43862031-43862092)
chr7 (21-86)||(46414660-46414725)
chr7 (213-269)||(25059456-25059512)
chr7 (36-124)||(34659226-34659314)
chr7 (22-145)||(38578866-38578990)
[»] chr5 (32 HSPs)
chr5 (207-287)||(30720492-30720572)
chr5 (207-287)||(36561099-36561179)
chr5 (207-287)||(40886610-40886690)
chr5 (12-208)||(7736845-7737042)
chr5 (207-287)||(12806853-12806933)
chr5 (207-287)||(10285058-10285138)
chr5 (207-287)||(25683229-25683309)
chr5 (207-287)||(25773846-25773926)
chr5 (207-287)||(23097724-23097804)
chr5 (207-287)||(37900623-37900703)
chr5 (207-285)||(734339-734417)
chr5 (209-287)||(16983454-16983532)
chr5 (214-287)||(11319753-11319826)
chr5 (207-287)||(26168105-26168185)
chr5 (22-145)||(42086311-42086435)
chr5 (22-124)||(12081892-12081994)
chr5 (213-287)||(39071079-39071153)
chr5 (22-145)||(5731919-5732043)
chr5 (22-86)||(21149718-21149782)
chr5 (15-102)||(24875322-24875409)
chr5 (207-287)||(1056625-1056703)
chr5 (18-86)||(25467390-25467458)
chr5 (238-287)||(11795314-11795363)
chr5 (226-285)||(30402981-30403040)
chr5 (22-124)||(14588638-14588740)
chr5 (207-269)||(15304822-15304884)
chr5 (22-135)||(7866565-7866678)
chr5 (37-145)||(9805003-9805112)
chr5 (218-287)||(16054308-16054377)
chr5 (22-135)||(19572708-19572821)
chr5 (204-245)||(30720731-30720772)
chr5 (18-118)||(37263221-37263320)
[»] chr3 (38 HSPs)
chr3 (207-287)||(29375329-29375409)
chr3 (207-287)||(46694110-46694190)
chr3 (207-287)||(13365040-13365120)
chr3 (207-287)||(36881477-36881557)
chr3 (207-287)||(19241668-19241748)
chr3 (204-287)||(3383273-3383356)
chr3 (207-287)||(23087931-23088011)
chr3 (207-287)||(48820537-48820617)
chr3 (206-287)||(32834988-32835069)
chr3 (207-287)||(199052-199132)
chr3 (207-287)||(18355868-18355948)
chr3 (207-287)||(13703409-13703489)
chr3 (207-287)||(26783666-26783746)
chr3 (230-287)||(31873886-31873943)
chr3 (222-287)||(43750333-43750398)
chr3 (213-287)||(6901758-6901831)
chr3 (218-287)||(48436421-48436490)
chr3 (22-93)||(3755553-3755624)
chr3 (218-285)||(54086751-54086818)
chr3 (22-135)||(29135896-29136009)
chr3 (25-86)||(51683014-51683075)
chr3 (18-82)||(41219572-41219635)
chr3 (36-86)||(928597-928647)
chr3 (207-269)||(19912153-19912215)
chr3 (207-269)||(38806320-38806382)
chr3 (203-269)||(44276771-44276837)
chr3 (213-287)||(48963316-48963390)
chr3 (18-135)||(10040536-10040652)
chr3 (17-124)||(32873571-32873677)
chr3 (207-269)||(12095402-12095464)
chr3 (216-286)||(24064418-24064488)
chr3 (204-245)||(198852-198893)
chr3 (202-239)||(37293432-37293469)
chr3 (22-86)||(6462395-6462459)
chr3 (22-145)||(25294943-25295067)
chr3 (22-145)||(47219127-47219251)
chr3 (18-86)||(49082803-49082871)
chr3 (22-86)||(52364860-52364924)
[»] chr2 (41 HSPs)
chr2 (207-287)||(22388138-22388218)
chr2 (207-285)||(23366988-23367066)
chr2 (207-286)||(3519105-3519184)
chr2 (207-287)||(1102698-1102778)
chr2 (207-287)||(1646484-1646564)
chr2 (204-287)||(12969737-12969820)
chr2 (207-287)||(39938367-39938447)
chr2 (205-287)||(37673741-37673823)
chr2 (207-287)||(40756911-40756991)
chr2 (17-135)||(11069856-11069974)
chr2 (210-287)||(36447455-36447532)
chr2 (213-287)||(37284525-37284598)
chr2 (22-86)||(16034920-16034984)
chr2 (22-145)||(18902529-18902653)
chr2 (22-86)||(37560156-37560220)
chr2 (22-86)||(38962746-38962810)
chr2 (22-86)||(41187832-41187896)
chr2 (22-145)||(41220618-41220742)
chr2 (17-124)||(6358172-6358279)
chr2 (236-287)||(14779972-14780023)
chr2 (22-135)||(331484-331597)
chr2 (17-145)||(25540403-25540532)
chr2 (242-287)||(32838964-32839009)
chr2 (22-86)||(7747257-7747321)
chr2 (22-145)||(10823043-10823167)
chr2 (22-145)||(14169608-14169732)
chr2 (22-82)||(14853430-14853490)
chr2 (22-86)||(15234120-15234184)
chr2 (22-86)||(21286427-21286491)
chr2 (207-287)||(28110095-28110175)
chr2 (207-287)||(39561895-39561970)
chr2 (22-86)||(42770710-42770774)
chr2 (25-92)||(10106574-10106641)
chr2 (244-287)||(19976525-19976568)
chr2 (22-93)||(19976859-19976930)
chr2 (17-146)||(35946717-35946846)
chr2 (38-135)||(10026626-10026723)
chr2 (22-135)||(39201518-39201631)
chr2 (22-145)||(2550851-2550975)
chr2 (38-145)||(34130301-34130408)
chr2 (22-86)||(39806944-39807008)
[»] chr1 (54 HSPs)
chr1 (207-287)||(40783657-40783737)
chr1 (206-287)||(321823-321904)
chr1 (207-287)||(284530-284610)
chr1 (207-287)||(23045279-23045359)
chr1 (207-287)||(23526436-23526516)
chr1 (207-287)||(24771906-24771986)
chr1 (207-287)||(47037852-47037932)
chr1 (202-287)||(33082941-33083026)
chr1 (212-286)||(46771836-46771910)
chr1 (207-287)||(51064754-51064834)
chr1 (213-287)||(27210961-27211035)
chr1 (214-287)||(40562293-40562366)
chr1 (207-287)||(31003787-31003867)
chr1 (212-287)||(14925659-14925734)
chr1 (242-287)||(40261320-40261365)
chr1 (207-287)||(18396891-18396971)
chr1 (207-287)||(34458724-34458804)
chr1 (22-93)||(12744576-12744647)
chr1 (22-93)||(12755566-12755637)
chr1 (214-285)||(23166858-23166929)
chr1 (207-285)||(27143014-27143090)
chr1 (244-287)||(40052501-40052544)
chr1 (17-145)||(9659179-9659307)
chr1 (214-287)||(24876758-24876831)
chr1 (243-287)||(1749471-1749515)
chr1 (22-93)||(45726486-45726557)
chr1 (207-269)||(3943742-3943804)
chr1 (207-269)||(41959788-41959850)
chr1 (203-245)||(51064995-51065037)
chr1 (22-86)||(5855506-5855570)
chr1 (22-145)||(8763975-8764099)
chr1 (22-86)||(16263529-16263593)
chr1 (22-145)||(18649352-18649476)
chr1 (22-118)||(31734273-31734368)
chr1 (18-145)||(41663856-41663984)
chr1 (22-86)||(45361942-45362006)
chr1 (18-145)||(49078094-49078222)
chr1 (22-86)||(51437453-51437517)
chr1 (214-284)||(25929298-25929368)
chr1 (214-287)||(31061463-31061539)
chr1 (204-245)||(284330-284371)
chr1 (22-135)||(2567260-2567373)
chr1 (207-264)||(9589615-9589672)
chr1 (17-54)||(13265917-13265954)
chr1 (204-245)||(23045518-23045559)
chr1 (17-86)||(34334355-34334424)
chr1 (243-287)||(14350510-14350554)
chr1 (22-86)||(16956450-16956514)
chr1 (22-86)||(17358531-17358595)
chr1 (22-86)||(18808249-18808313)
chr1 (22-145)||(26325796-26325920)
chr1 (205-245)||(41959076-41959116)
chr1 (26-86)||(44969653-44969712)
chr1 (22-86)||(50503421-50503485)
[»] scaffold1770 (1 HSPs)
scaffold1770 (204-287)||(358-441)
[»] chr6 (28 HSPs)
chr6 (204-287)||(4129623-4129706)
chr6 (207-287)||(7761497-7761577)
chr6 (207-287)||(8626679-8626759)
chr6 (207-287)||(13757404-13757484)
chr6 (207-285)||(1605777-1605855)
chr6 (207-287)||(29260389-29260469)
chr6 (207-285)||(15064695-15064773)
chr6 (214-287)||(8235822-8235895)
chr6 (207-287)||(17942640-17942720)
chr6 (207-287)||(31559738-31559818)
chr6 (205-287)||(30734481-30734563)
chr6 (26-145)||(12606421-12606541)
chr6 (26-145)||(3601075-3601195)
chr6 (22-145)||(13468920-13469044)
chr6 (22-145)||(19089485-19089609)
chr6 (207-287)||(20398238-20398318)
chr6 (22-86)||(21898635-21898699)
chr6 (207-269)||(19996322-19996384)
chr6 (22-135)||(34954629-34954742)
chr6 (207-287)||(3798296-3798376)
chr6 (22-145)||(6606096-6606220)
chr6 (22-86)||(13584509-13584573)
chr6 (207-245)||(15064933-15064971)
chr6 (18-116)||(33939994-33940092)
chr6 (22-118)||(2271330-2271424)
chr6 (29-145)||(8938705-8938822)
chr6 (25-86)||(14107417-14107478)
chr6 (22-145)||(13036003-13036127)
[»] scaffold0054 (1 HSPs)
scaffold0054 (204-287)||(45650-45733)
[»] scaffold0062 (1 HSPs)
scaffold0062 (227-287)||(287-347)
[»] scaffold0168 (1 HSPs)
scaffold0168 (207-287)||(7865-7945)
[»] scaffold0170 (1 HSPs)
scaffold0170 (22-124)||(9831-9933)
[»] scaffold0056 (1 HSPs)
scaffold0056 (217-287)||(71280-71350)
[»] scaffold0257 (1 HSPs)
scaffold0257 (204-269)||(23851-23916)
[»] scaffold0635 (1 HSPs)
scaffold0635 (25-92)||(2143-2210)
[»] scaffold0005 (1 HSPs)
scaffold0005 (18-81)||(249369-249432)
[»] scaffold0025 (1 HSPs)
scaffold0025 (241-287)||(65199-65245)


Alignment Details
Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 203 - 287
Target Start/End: Original strand, 40918727 - 40918811
Alignment:
Q  203 atattactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40918727 atattactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 40918811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 7147190 - 7147110
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7147190 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 7147110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 40058303 - 40058383
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40058303 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 40058383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 43275399 - 43275479
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43275399 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 43275479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 11646325 - 11646405
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11646325 tactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgc 11646405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 30999524 - 30999604
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30999524 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgttactttcaagtttcaatgc 30999604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 36068357 - 36068277
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36068357 tactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgc 36068277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 37345849 - 37345768
Alignment:
Q  206 ttactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37345849 ttactccttccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcattttcaagtttcaatgc 37345768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 2539930 - 2540010
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2539930 tactccttccgtttcataatacttgtccattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 2540010  T

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Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 11174223 - 11174303
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11174223 tactccctccgtttcataatacttgttcattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 11174303  T

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Target: chr8; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 3585728 - 3585648
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3585728 tactccatccgtttcataatacttgtctattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgc 3585648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 27035272 - 27035192
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27035272 tactgcctccgtttcataatacttgttcattttggagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 27035192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 20546308 - 20546373
Alignment:
Q  222 ataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  20546308 ataatacttgtccattttgaagaataattttgtttcacaatacttgtcactttcaggtttcaatgc 20546373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 285
Target Start/End: Complemental strand, 35866890 - 35866812
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaat 285  Q
    |||||| ||||||||| |||||||||| ||||| ||||||||||||||||||   ||||||||||||||||||||||||    
T  35866890 tactccatccgtttcacaatacttgtctattttggagaataattttgtttcattttacttgtcactttcaagtttcaat 35866812  T

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Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 28568195 - 28568115
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||| ||||| |||||||||||||||| |||||| |||||||||||   ||||||||||||| ||||||||||||    
T  28568195 tactccctccatttcacaatacttgtccattttggagaattattttgtttcattttacttgtcactttgaagtttcaatgc 28568115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 28575788 - 28575708
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||| ||||| |||||||||||||||| |||||| |||||||||||   ||||||||||||| ||||||||||||    
T  28575788 tactccctccatttcacaatacttgtccattttggagaattattttgtttcattttacttgtcactttgaagtttcaatgc 28575708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 28562698 - 28562618
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||| ||| ||||||| ||||||||  ||||| |||||||||||   ||||||||||||||||||||||||||    
T  28562698 tactccctccgtctcacaatacttatccattttgaagaattattttgtttcattttacttgtcactttcaagtttcaatgc 28562618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 287
Target Start/End: Original strand, 45400767 - 45400850
Alignment:
Q  204 tattactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||  |||  |||| |||||||||||||||||||  || |||||||||| || |||||||||    
T  45400767 tattactccctccgtttcataatacaagtcgtttttggagaataattttgtttcactttatttgtcacttttaaatttcaatgc 45400850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 10180897 - 10180948
Alignment:
Q  236 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||||||||||    
T  10180897 ttttggagaacaattttgtttcacattacttgtcactttcaagtttcaatgc 10180948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 27563885 - 27563947
Alignment:
Q  225 atacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||  |||| ||||| |||||||||||| | ||||||||||||||||||||||||||    
T  27563885 atacttgtcgcttttggagaacaattttgtttcatattacttgtcactttcaagtttcaatgc 27563947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 6100459 - 6100523
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||||||| |||||||| | |||||||| ||||| |||||||| ||| ||||||||||||    
T  6100459 aaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatg 6100523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 13880991 - 13881035
Alignment:
Q  243 gaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||| | ||||||||||||||||||||||||||    
T  13880991 gaataattttgtttcaaattacttgtcactttcaagtttcaatgc 13881035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 287
Target Start/End: Original strand, 26628822 - 26628896
Alignment:
Q  213 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||| ||||| |||   |||| |||||||||||||||||||  || |||||| ||||||||||||||||    
T  26628822 ctccgtttcacaatacatgttgcttttggagaataattttgtttcactttatttgtcattttcaagtttcaatgc 26628896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 18374004 - 18374061
Alignment:
Q  29 tatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    |||||| | |||||||| |||||||||||||  |||||||| ||||||||||||||||    
T  18374004 tatccgggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcatg 18374061  T

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Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 41305762 - 41305824
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtc 269  Q
    ||||| |||||||||| ||||| ||||||||||||||||   |||||||||| ||||| ||||    
T  41305762 tactctctccgtttcaaaatacatgtccattttagagaaattttttgtttcaaaatacatgtc 41305824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 45278758 - 45278716
Alignment:
Q  203 atattactccctccgtttcataatacttgtccattttagagaa 245  Q
    |||||||||||||||||||| ||||| |||||||||| |||||    
T  45278758 atattactccctccgtttcaaaatacatgtccattttggagaa 45278716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 14666199 - 14666070
Alignment:
Q  17 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 116  Q
    |||| ||||||||||||| |||||||| | |||||||| ||||   ||||||  ||| ||||||||||||  |||||  || ||||| ||||| || |||    
T  14666199 attccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcacaagccagattagtcgccca 14666100  T
Q  117 ccgttggttggttggaaa-cggtgcgaaag 145  Q
    | |||||| ||| | ||| |||||||||||    
T  14666099 cagttggtgggtcgaaaaccggtgcgaaag 14666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 10535526 - 10535403
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    |||||||||||||||||||||  | ||| ||| |||||  ||||| || ||||||||||||||||| || ||  | ||||| |||||| ||| |||| ||    
T  10535526 aaggacgtatccgaggaatacatggttcaattttcagg-ggaacaccgcttgaccagtgcgcatgtctccacgcatgagccgaattagtcgttcaccttt 10535428  T
Q  122 ggttggttggaaac-ggtgcgaaag 145  Q
    |||  || |||||| ||||||||||    
T  10535427 ggtaagtcggaaactggtgcgaaag 10535403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 10927593 - 10927657
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||| ||| |||||||| | ||||||||  |||| |||||||| ||| ||||||||||||    
T  10927593 aaggacgtacccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatg 10927657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 14846559 - 14846686
Alignment:
Q  18 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccac 117  Q
    ||||||||||||| ||| |||||||| | |||||||||||||  |||||| | |||  |||||||||||  |||||  | ||| || || || |||||||    
T  14846559 ttctaaggacgtacccggggaataccgggttcgattctcagg-ggaacaatgattggtcagtgcgcatgcctctacgcatgagtcagataagtcgtccac 14846657  T
Q  118 cgttggttggttggaaa-cggtgcgaaag 145  Q
    | ||||| ||| ||||| |||||||||||    
T  14846658 ctttggtgggtcggaaatcggtgcgaaag 14846686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 27034995 - 27035035
Alignment:
Q  205 attactccctccgtttcataatacttgtccattttagagaa 245  Q
    |||||||||||||||||| ||||| |||||||||| |||||    
T  27034995 attactccctccgtttcaaaatacatgtccattttggagaa 27035035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 12071839 - 12071757
Alignment:
Q  205 attactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12071839 attactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 12071757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 21310698 - 21310618
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21310698 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 21310618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 14261321 - 14261241
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14261321 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgc 14261241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 22321268 - 22321348
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22321268 tactccctccgtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 22321348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 24706247 - 24706327
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24706247 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgc 24706327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 25704928 - 25704852
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttca 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25704928 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttca 25704852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 40122487 - 40122567
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40122487 tactctctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 40122567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 44569114 - 44569034
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  44569114 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcatgtttcaatgc 44569034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 21661537 - 21661615
Alignment:
Q  209 ctccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  21661537 ctccctccgtttcataatacttgtccattttagagaataattttgtttcacaatatttatcactttcaagtttcaatgc 21661615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 21670301 - 21670379
Alignment:
Q  209 ctccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  21670301 ctccctccgtttcataatacttgtccattttagagaataattttgtttcacaatatttatcactttcaagtttcaatgc 21670379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 50768129 - 50768059
Alignment:
Q  217 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50768129 gtttcataatacttgtccattttagagaataattttgtttcacaatatttgtcactttcaagtttcaatgc 50768059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 20249014 - 20249094
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||    
T  20249014 tactcactccgtttcataatacttgtccattttggagaataattttgtttcacaatacctgtctctttcaagtttcaatgc 20249094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 21065037 - 21064958
Alignment:
Q  208 actccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||| |||||||||    
T  21065037 actccctccgtttcataatacttgttcattttagagaataattttgtttcacaatacttatcgctttcaaatttcaatgc 21064958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 295659 - 295534
Alignment:
Q  18 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccac 117  Q
    ||||||||||||||||| ||||||||||||||||||| ||| | |||||||||||| ||||||||||||  |||||  |||| ||| ||||| |||||||    
T  295659 ttctaaggacgtatccggggaataccagattcgattcccag-aggaacaacgtttggccagtgcgcatgcctctacgcacgaaccagattagtcgtccac 295561  T
Q  118 cgttggttggttggaaa-cggtgcgaa 143  Q
    ||||||| |||| |||| |||||||||    
T  295560 cgttggtgggtttgaaaccggtgcgaa 295534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 19692999 - 19692919
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||| ||||| ||| |||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  19692999 tactccatccgtatcacaatacttgtctattttagagaataattttgtttcactttacttgtcactttcaagtttcaatgc 19692919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 19703584 - 19703504
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||| ||||| ||| |||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  19703584 tactccatccgtatcacaatacttgtctattttagagaataattttgtttcactttacttgtcactttcaagtttcaatgc 19703504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 50839030 - 50839111
Alignment:
Q  206 ttactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||| ||||| ||||||||||  |||| |||||||||||||||||||| ||||||||| ||||||||||||||||    
T  50839030 ttactccctccatttcacaatacttgtcgcttttggagaataattttgtttcacattacttgtcattttcaagtttcaatgc 50839111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 18507276 - 18507346
Alignment:
Q  217 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||| ||||||||||  |||||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  18507276 gtttcacaatacttgtcgcttttagagcataattttgtttcacatttcttgtcactttcaagtttcaatgc 18507346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 32543756 - 32543676
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||| || |||||| ||||||||||  |||||||||||||||||||||||   ||||||| |||||||||||| |||||    
T  32543756 tactccttctgtttcacaatacttgtcgcttttagagaataattttgtttcattttacttgttactttcaagttttaatgc 32543676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 4736585 - 4736708
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||| ||| |||||||||||| | ||| ||||||||    ||||||||||| ||| || |||||  ||||| ||| |||| |||||| || ||||||||    
T  4736585 aaggatgtacccgaggaataccgggttcaattctcagtggaaacaacgtttggccaatgtgcatgcctctacgtacaagccgaattagtcgcccaccgtt 4736684  T
Q  122 ggttggttggaaacggtgcgaaag 145  Q
    ||| ||| ||||||||||||||||    
T  4736685 ggtgggtcggaaacggtgcgaaag 4736708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 286
Target Start/End: Complemental strand, 31892493 - 31892430
Alignment:
Q  223 taatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatg 286  Q
    ||||||||||| || || |||||||||||||||| ||||||||||||||||| |||||| ||||    
T  31892493 taatacttgtctatcttggagaataattttgttttacaatacttgtcacttttaagttttaatg 31892430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 6128956 - 6129029
Alignment:
Q  214 tccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||| ||||| ||||  ||||  |||||||||||||||||   ||||||||||||||||||||||||||    
T  6128956 tccgtttcacaatacatgtcgcttttgaagaataattttgtttcattttacttgtcactttcaagtttcaatgc 6129029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 14859302 - 14859375
Alignment:
Q  45 gattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccacc 118  Q
    ||||||||| |||||| |||||| ||||||||||||||||||| |||||  |||||||| ||||| | ||||||    
T  14859302 gattcgattttcaggaggaacaatgtttgaccagtgcgcatgtctctacgcacgagccagattagtcatccacc 14859375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 5472971 - 5472847
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||||||| |||||||||| || ||||||||||   ||||||| ||| ||||||||||||  |||||  |||||||  ||||| || ||||| ||    
T  5472971 aaggacgtatccggggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccaccttt 5472872  T
Q  122 ggttggttggaaac-ggtgcgaaag 145  Q
    ||| ||| | |||| ||||||||||    
T  5472871 ggtgggtcgaaaactggtgcgaaag 5472847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 145
Target Start/End: Original strand, 14124016 - 14124128
Alignment:
Q  34 gaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggttggttggaa 133  Q
    |||||||||||| |||||||| ||||  ||||||| |||| ||||||||||||  |||||  |||||||  ||||| ||  |||| ||||| ||||||||    
T  14124016 gaggaataccaggttcgattcccagggggaacaacatttggccagtgcgcatgcctctacacacgagccggattagtcgctcaccattggtgggttggaa 14124115  T
Q  134 a-cggtgcgaaag 145  Q
    | |||||||||||    
T  14124116 accggtgcgaaag 14124128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 53599048 - 53599112
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||| ||| |||||||| | |||||||| ||||| |||||||||||| ||||||||||||    
T  53599048 aaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgcgcatg 53599112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 146
Target Start/End: Original strand, 29895775 - 29895900
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||||||| |||||||| | |||||||| ||||  |||||||  ||| ||||||||||||  |||||  | |||||  ||||| |||||||| ||    
T  29895775 aaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccatt 29895874  T
Q  122 ggttggttggaaa-cggtgcgaaagg 146  Q
    ||| | | ||||| ||||||||||||    
T  29895875 ggtggttcggaaaccggtgcgaaagg 29895900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 20128297 - 20128421
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||||||| |||||||  | |||||||||||||  |||||| | ||| ||||||||||||  | |||  |||||| | ||||| |||||||| ||    
T  20128297 aaggacgtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcacgagctagattagtcgtccaccatt 20128396  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    ||| |||  |||| |||||||||||    
T  20128397 ggtgggtcagaaaccggtgcgaaag 20128421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 38166015 - 38166139
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||||||| |||||||  | || ||||| ||||  |||||||| ||| ||||||||||||  |||||  |||||||  ||||| || ||||| ||    
T  38166015 aaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgcgcatggctctacgcacgagccggattagtcgcccaccttt 38166114  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    ||| ||| ||||| |||||||||||    
T  38166115 ggtgggtcggaaaccggtgcgaaag 38166139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 14567943 - 14568006
Alignment:
Q  18 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgc 81  Q
    ||||||||||||||  | |||||||||| |||||||||||||  ||| |||| |||||||||||    
T  14567943 ttctaaggacgtatttggggaataccaggttcgattctcagggagaataacgcttgaccagtgc 14568006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 21429292 - 21429411
Alignment:
Q  25 gacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggt 124  Q
    ||||||||||||||||| | | ||||||| | |||  |||||||||||  ||||||||||||  |||||  ||||| || | ||| |||||||| |||||    
T  21429292 gacgtatccgaggaatatcgggttcgatttttagggggaacaacgtttagccagtgcgcatgcctctacgcacgagtcagactagtcgtccacctttggt 21429391  T
Q  125 tggttggaaa-cggtgcgaa 143  Q
     ||| ||||| |||||||||    
T  21429392 gggtcggaaaccggtgcgaa 21429411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 35359749 - 35359788
Alignment:
Q  47 ttcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  35359749 ttcgattctcagggggaacaacgtttgaccagtgcgcatg 35359788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 242
Target Start/End: Complemental strand, 39295453 - 39295418
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttaga 242  Q
    |||||| |||||||||||||||||||||||||||||    
T  39295453 tactccttccgtttcataatacttgtccattttaga 39295418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 8889006 - 8889123
Alignment:
Q  18 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccac 117  Q
    ||||||||||||||||| |||||||| | ||||||||  |||  |||||||  |||  |||||||||||  |||||  | |||||  ||||| |||||||    
T  8889006 ttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgcgcatggctctacgcatgagccggattagtcgtccac 8889105  T
Q  118 cgttggttggttggaaac 135  Q
    | ||||| ||| ||||||    
T  8889106 ctttggtgggtcggaaac 8889123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 24850754 - 24850686
Alignment:
Q  17 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    |||| ||||||||||||| | |||||||||||| ||| |||||  |||||||  ||||||||||||||||    
T  24850754 attccaaggacgtatccgggaaataccagattcaattatcagg-ggaacaacacttgaccagtgcgcatg 24850686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 43458596 - 43458697
Alignment:
Q  17 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 116  Q
    |||| ||||||||||  | |||||||  |||||||||| ||||| ||| |||| ||| ||||||||||||  |||||  |||||||  ||||| ||||||    
T  43458596 attccaaggacgtatttggggaatactggattcgattcccaggaggaagaacgcttggccagtgcgcatgcctctacggacgagccggattagtcgtcca 43458695  T
Q  117 cc 118  Q
    ||    
T  43458696 cc 43458697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 1446814 - 1446878
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||||||| |||||||| | |||||||| ||||  |||||||  ||| ||||||||||||    
T  1446814 aaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatg 1446878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 2559295 - 2559419
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||| | | |||||||| |||||||||   |||| |||||||| ||| ||||||||||||  |||||  || ||||  ||||  |||||||| ||    
T  2559295 aaggacgtacctggggaataccggattcgatttctaggaggaacaacgcttggccagtgcgcatgcctctacgcacaagccggattactcgtccaccttt 2559394  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    ||| ||| ||||| |||||||||||    
T  2559395 ggtgggtcggaaaccggtgcgaaag 2559419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 34324618 - 34324654
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagag 243  Q
    |||||| || |||||||||||||||||||||||||||    
T  34324618 tactccatctgtttcataatacttgtccattttagag 34324654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 4e-38; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 27814088 - 27814008
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27814088 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 27814008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 36453124 - 36453204
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36453124 tactctctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 36453204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 10981785 - 10981705
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10981785 tactccctccatttcataatatttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 10981705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 25614353 - 25614433
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25614353 tactccctccgtttcataataattgtccattttagagaataattttgtttcacaatacttgtcacttttaagtttcaatgc 25614433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 47110727 - 47110647
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47110727 tactccctccgtttcataatacttattcattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 47110647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 40349238 - 40349159
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  40349238 tactccctccgtttcataatacttgtccattttagagaataa-tttgtttcacaatacttgtcacttttaagtttcaatgc 40349159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 16662372 - 16662290
Alignment:
Q  205 attactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||| ||||| ||||||||||  ||||  ||||||||||||||| | | ||||||||||||||||||||||||||    
T  16662372 attactccctccatttcacaatacttgtcacttttgaagaataattttgttttaaattacttgtcactttcaagtttcaatgc 16662290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 205 - 287
Target Start/End: Complemental strand, 17636732 - 17636650
Alignment:
Q  205 attactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||| ||||| ||||||||||  ||||  ||||||||||||||| | | ||||||||||||||||||||||||||    
T  17636732 attactccctccatttcacaatacttgtcacttttgaagaataattttgttttaaattacttgtcactttcaagtttcaatgc 17636650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 23823931 - 23823999
Alignment:
Q  18 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    |||||||||||||||||||||||| |||||| |||||||| |   ||||||||||| ||||||||||||    
T  23823931 ttctaaggacgtatccgaggaatatcagatttgattctcaagggaaacaacgtttggccagtgcgcatg 23823999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 29151928 - 29151990
Alignment:
Q  24 ggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||| | |||||||||| | |||||||| ||||| |||||||||||||||||||||||||    
T  29151928 ggacgtacctgaggaataccgggttcgattcccaggaagaacaacgtttgaccagtgcgcatg 29151990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 4195325 - 4195212
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||||||| ||||||||   |||||||  ||||| ||||||| |||| | ||||||||||  |||||  | |||||  |||||||||||||| ||    
T  4195325 aaggacgtatccggggaataccgagttcgatttccaggaggaacaacatttggctagtgcgcatgcctctacgcatgagccggattagccgtccaccatt 4195226  T
Q  122 ggttggttggaaac 135  Q
    ||| ||||||||||    
T  4195225 ggtgggttggaaac 4195212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 17748505 - 17748392
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    |||||||||| || |||||||| | |||||||| ||||  |||||||| ||| ||||||||||||  ||||| ||||||||  ||||| |||||||| ||    
T  17748505 aaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgtacgagccggattagtcgtccaccttt 17748406  T
Q  122 ggttggttggaaac 135  Q
    | | ||| ||||||    
T  17748405 gttgggtcggaaac 17748392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 1797446 - 1797526
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagcc 102  Q
    |||||||||||||||||||||| | |||||||| ||||   ||||||| ||| ||||||||||||| |||||  |||||||    
T  1797446 aaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgcatgtctctacgcacgagcc 1797526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 283
Target Start/End: Original strand, 27941013 - 27941060
Alignment:
Q  236 ttttagagaataattttgtttcacaatacttgtcactttcaagtttca 283  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  27941013 ttttggagaacaattttgtttcacattacttgtcactttcaagtttca 27941060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 42210385 - 42210272
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    |||||||||||||||||||||| | |||||||| |||    ||||||||||| ||||||||||||  |||||  |||||||  ||||  |  ||||||||    
T  42210385 aaggacgtatccgaggaataccggcttcgattcccagtgaaaacaacgtttggccagtgcgcatgcctctacgcacgagccggattaatcacccaccgtt 42210286  T
Q  122 ggttggttggaaac 135  Q
    ||| ||| ||||||    
T  42210285 ggtgggtcggaaac 42210272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 365130 - 365190
Alignment:
Q  26 acgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    |||||||||||||||||| | |||||||| ||||| |||||||| || | |||||||||||    
T  365130 acgtatccgaggaataccgggttcgattcacaggaggaacaacgcttaatcagtgcgcatg 365190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 10047999 - 10047875
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||||||| |||||||| | |||||||| ||||  |||||||  ||| |||||||||| |  |||||  | ||||  |||||| |||||||| ||    
T  10047999 aaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcaggcctctacgcatgagcagaattagtcgtccaccatt 10047900  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    ||| ||| ||||| |||||||||||    
T  10047899 ggtgggtcggaaaccggtgcgaaag 10047875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 16802109 - 16802169
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcg 82  Q
    ||||||||| ||| |||||||| ||||||||||| |||| |||||||| ||| ||||||||    
T  16802109 aaggacgtacccggggaataccggattcgattcttaggaggaacaacgattggccagtgcg 16802169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 48804669 - 48804793
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||||||| |||||||| | |||||||| || |  |||||||  ||| ||||||||||||  |||||  | |||||  ||||| |||||||| ||    
T  48804669 aaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccatt 48804768  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    ||| ||| ||||| |||||||||||    
T  48804769 ggtgggtcggaaaccggtgcgaaag 48804793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 4228874 - 4228813
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    |||||||||||||||||||||||| |||||||  |||   |||||||||||| ||||||| ||||    
T  4228874 aaggacgtatccgaggaataccaggttcgatttccag---gaacaacgtttggccagtgcacatg 4228813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 285
Target Start/End: Complemental strand, 16360653 - 16360576
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaat 285  Q
    |||||| || |||||| |||| |||||  |||| ||||||||||| | |||||  ||||||||||||||||||||||||    
T  16360653 tactccttctgtttcacaatatttgtcgtttttggagaataattt-gcttcactttacttgtcactttcaagtttcaat 16360576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 22973953 - 22974055
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    |||||||||  || |||||||| | |||||||||||||  |||||||| ||| |||||| |||||  |||||  | |||||| ||||| |||||||| ||    
T  22973953 aaggacgtactcggggaataccgggttcgattctcagggggaacaacgcttggccagtgtgcatgcgtctacgcatgagccagattagtcgtccaccttt 22974052  T
Q  122 ggt 124  Q
    |||    
T  22974053 ggt 22974055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 287
Target Start/End: Complemental strand, 3091755 - 3091710
Alignment:
Q  242 agaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||  ||||||||| ||| ||||||||||||    
T  3091755 agaataattttgtttcactttacttgtcatttttaagtttcaatgc 3091710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 287
Target Start/End: Original strand, 24456800 - 24456845
Alignment:
Q  242 agaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||| ||  ||||||||||| ||||||||||||||    
T  24456800 agaataattttgtttaactttacttgtcactctcaagtttcaatgc 24456845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 43862092 - 43862031
Alignment:
Q  25 gacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    |||||||| | |||||||| | |||||||| ||||  |||||||||||| ||||||||||||    
T  43862092 gacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgcgcatg 43862031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 46414660 - 46414725
Alignment:
Q  21 taaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    |||||||||| ||| |||||||||  |||||||||||||| ||| |||| ||| ||| ||||||||    
T  46414660 taaggacgtacccgtggaataccaagttcgattctcaggatgaataacgcttggccaatgcgcatg 46414725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 25059456 - 25059512
Alignment:
Q  213 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtc 269  Q
    |||||||||| ||||| ||||||||||||||||   |||||||||| ||||| ||||    
T  25059456 ctccgtttcaaaatacatgtccattttagagaaattttttgtttcaaaatacatgtc 25059512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 34659226 - 34659314
Alignment:
Q  36 ggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggt 124  Q
    |||||||| | ||||||||||| |  |||||||| ||||||||||||||||  |||||  |||||||  ||||| || ||||| |||||    
T  34659226 ggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccaccattggt 34659314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 38578990 - 38578866
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||| ||| |||||| | | |||||||| ||||  |||||||| ||| ||||||||||||  |||||  | |||||  ||||| || ||||| ||    
T  38578990 aaggacgtacccggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccaccttt 38578891  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    ||| ||| ||||| |||||||||||    
T  38578890 ggtgggtcggaaaccggtgcgaaag 38578866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 4e-38; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 30720492 - 30720572
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30720492 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 30720572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 36561099 - 36561179
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36561099 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 36561179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 40886610 - 40886690
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40886610 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 40886690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 12 - 208
Target Start/End: Original strand, 7736845 - 7737042
Alignment:
Q  12 agattattctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagcc 111  Q
    |||| |||||||||||||| |||||||||| |   ||||||||||||||| |||||||||||  |||||| ||| | ||||||||| || || |||||||    
T  7736845 agatcattctaaggacgtacccgaggaatatcgagttcgattctcaggacaaacaacgtttggtcagtgcacatatctctacttacaagtcagattagcc 7736944  T
Q  112 gtccaccgttggttggttggaaa-cggtgcgaaaggnnnnnnnnncaatttgaatcattggaagtatggtttttctaaccatttcaagtgggatatta 208  Q
    ||| ||||||||||| ||||||| |||||||||||           || |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7736945 gtcgaccgttggttgattggaaaccggtgcgaaagaaaaaataaaaaaattgaatcattggaagtatgggttttctaaccatttcaagtgggatatta 7737042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 12806853 - 12806933
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12806853 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtctctttcaagtttcaatgc 12806933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 10285058 - 10285138
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10285058 tactccctccgtttcataatacttgtctattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 10285138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 25683229 - 25683309
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  25683229 tactccctccgtttcataatacttgtccattttggagaataattttgtttcataaaacttgtcactttcaagtttcaatgc 25683309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 25773926 - 25773846
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  25773926 tactctctccgtttcataatacttgtccattttagagaataagtttgtttcacaatacttatcactttcaagtttcaatgc 25773846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 23097724 - 23097804
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||    
T  23097724 tactccttccgtttcataatacttgtccattttggagaataattttgtttcacaatacttgttactttcatgtttcaatgc 23097804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 37900623 - 37900703
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||| |||||||||||||||||||| |||||  |||||||||||||||||| |||||||||||||||||||||||||||    
T  37900623 tactccttccgtttcataatacttgtctattttgaagaataattttgtttcacgatacttgtcactttcaagtttcaatgc 37900703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 207 - 285
Target Start/End: Original strand, 734339 - 734417
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaat 285  Q
    ||||||| |||||||| |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  734339 tactcccaccgtttcacaatacttgtccattttggagaataattttgtttcactttacttgtcactttcaagtttcaat 734417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 16983532 - 16983454
Alignment:
Q  209 ctccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||| |||| |||||||||||| |||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  16983532 ctccctctgttttataatacttgtctattttgaagaataattttgtttcacaatacttgtcacttttaagtttcaatgc 16983454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 11319826 - 11319753
Alignment:
Q  214 tccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||| |||||||||||||||||||||||||  || || ||||||||| |||| |||||    
T  11319826 tccgtttcataatacttgtctattttagagaataattttgtttcactttatttatcactttcaggttttaatgc 11319753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 26168185 - 26168105
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||| |||||||||  |||| ||||  ||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  26168185 tactccttccgtttcacgatacatgtcgtttttagagaataattttgtttcactttaattgtcactttcaagtttcaatgc 26168105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 42086311 - 42086435
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||| |||||||||||| | |||||||| ||||  |||||||| ||||||||||||||||  |||||  | |||||  ||||| |||||||| ||    
T  42086311 aaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccaccttt 42086410  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    ||| ||| ||||| |||||||||||    
T  42086411 ggtgggtcggaaaccggtgcgaaag 42086435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 12081892 - 12081994
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||||||| |||||||  | |||||||||||||  |||||||| ||| ||||||||||||  |||||  ||||||| |||||| |||||||| ||    
T  12081892 aaggacgtatccggggaatactgggttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtccaccttt 12081991  T
Q  122 ggt 124  Q
    |||    
T  12081992 ggt 12081994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 287
Target Start/End: Complemental strand, 39071153 - 39071079
Alignment:
Q  213 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||| |||| |||||||||| ||||| |||||||||||||||||||  ||||||||||||| |||| |||||||    
T  39071153 ctccgattcacaatacttgtctatttttgagaataattttgtttcactttacttgtcacttttaagtatcaatgc 39071079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 5732043 - 5731919
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||| ||| |||||||| | |||||||| ||||| |||||||| ||| ||||||||||||  ||||| || |||||| ||||| ||| |||| ||    
T  5732043 aaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgtatgagccagattagtcgttcaccttt 5731944  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
     || ||| ||||| |||||||||||    
T  5731943 agtgggtcggaaaccggtgcgaaag 5731919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 21149718 - 21149782
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||||  |||||||||||| ||||||| |||||  |||||||||||||||||||||||||    
T  21149718 aaggacgtatttgaggaataccaggttcgattttcagggggaacaacgtttgaccagtgcgcatg 21149782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 24875322 - 24875409
Alignment:
Q  15 ttattctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagcc 102  Q
    |||||| ||||||||| || | ||||| ||| ||||||||| |||  |||||||||||||||||||||||||| |||||  |||||||    
T  24875322 ttattccaaggacgtacccaaagaatatcaggttcgattcttagggagaacaacgtttgaccagtgcgcatgtctctacgcacgagcc 24875409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 1056625 - 1056703
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||| ||||||||||  |||| |||||||||||| ||||| | ||| | ||||||||||||||||||||    
T  1056625 tactccctccgtttcacaatacttgtcacttttggagaataattttatttca-attac-tatcactttcaagtttcaatgc 1056703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 25467390 - 25467458
Alignment:
Q  18 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    |||||||||||||| | |||||||| |||||||||| |||||| |||||||| ||| ||||| ||||||    
T  25467390 ttctaaggacgtatacaaggaatactagattcgattttcaggaggaacaacgattggccagtacgcatg 25467458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 11795314 - 11795363
Alignment:
Q  238 ttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||  || || ||||||||||||||||||||    
T  11795314 ttagagaataattttgtttcactttatttatcactttcaagtttcaatgc 11795363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 30402981 - 30403040
Alignment:
Q  226 tacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaat 285  Q
    ||||||||  ||||||||||||||||| |||||   ||||||||||||| ||||||||||    
T  30402981 tacttgtcgcttttagagaataattttatttcattttacttgtcacttttaagtttcaat 30403040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 14588740 - 14588638
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||||| | |||||| | | ||||||| |||||| ||| |||| ||||||||||||||||  |||||  | |||||  ||||| |||||||| ||    
T  14588740 aaggacgtatctggggaatatcgggttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccaccttt 14588641  T
Q  122 ggt 124  Q
    |||    
T  14588640 ggt 14588638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 15304822 - 15304884
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtc 269  Q
    |||||||||||||| | ||||| ||||||||||||||||   |||||||||| ||||| ||||    
T  15304822 tactccctccgttttaaaatacatgtccattttagagaaattttttgtttcaaaatacatgtc 15304884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 7866565 - 7866678
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||| |||||||||||| | ||||||||  |||| |||||||| ||| |||||| |||||  |||||  |||| ||  ||||| || ||||| ||    
T  7866565 aaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgcccaccttt 7866664  T
Q  122 ggttggttggaaac 135  Q
    ||| |||| |||||    
T  7866665 ggtgggttagaaac 7866678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 9805003 - 9805112
Alignment:
Q  37 gaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggttggttggaaac- 135  Q
    ||||||| | |||||||| ||||  |||||||| ||| ||||||||||||  |||||  | |||||  ||||| |||||||| ||||| ||| ||||||     
T  9805003 gaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaca 9805102  T
Q  136 ggtgcgaaag 145  Q
    ||||||||||    
T  9805103 ggtgcgaaag 9805112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 16054377 - 16054308
Alignment:
Q  218 tttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||| ||||| ||||  |||| ||||||||||||| |||||  |  |||||||||||||||||||||||    
T  16054377 tttcaaaatacatgtcgcttttggagaataattttggttcactttggttgtcactttcaagtttcaatgc 16054308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 19572708 - 19572821
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||||||| |||||||| | || ||||| ||||  |||||||  ||| ||||||||||||  |||||  | |||||  ||||| ||| |||| ||    
T  19572708 aaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccatt 19572807  T
Q  122 ggttggttggaaac 135  Q
    ||| ||||||||||    
T  19572808 ggtgggttggaaac 19572821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 30720772 - 30720731
Alignment:
Q  204 tattactccctccgtttcataatacttgtccattttagagaa 245  Q
    ||||||||||||||||||| ||||| |||||||||| |||||    
T  30720772 tattactccctccgtttcaaaatacatgtccattttggagaa 30720731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 37263221 - 37263320
Alignment:
Q  18 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccac 117  Q
    ||||||||||||| ||| |||||| | | |||||||||||||  |||||||| ||| ||| ||||||||  |||||  |||||||  ||||| |||||||    
T  37263221 ttctaaggacgtacccggggaatatcgggttcgattctcagg-ggaacaacgcttggccaatgcgcatgcctctacgcacgagccggattagtcgtccac 37263319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 4e-38; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 29375409 - 29375329
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29375409 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 29375329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 46694110 - 46694190
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46694110 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 46694190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 13365120 - 13365040
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13365120 tactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgc 13365040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 36881557 - 36881477
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36881557 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgc 36881477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 19241668 - 19241748
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  19241668 tactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcacttttaagtttcaatgc 19241748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 204 - 287
Target Start/End: Complemental strand, 3383356 - 3383273
Alignment:
Q  204 tattactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3383356 tattactcctttcgttttataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 3383273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 23087931 - 23088011
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23087931 tacttcctccgtttcataatacttgtcgattttaaagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 23088011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 48820617 - 48820537
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  48820617 tacttcctccgtttcataatacttgtccattttaaaaaataattttgtttcacaatacttgtcactttcaagtttcaatgc 48820537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 32834988 - 32835069
Alignment:
Q  206 ttactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||| | ||||||||| ||||||||||||||||    
T  32834988 ttactccctccgtttcataatacttgtccattgtagagaataatttcgtttcatagtacttgtcattttcaagtttcaatgc 32835069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 199132 - 199052
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||    
T  199132 tactccctccatttcataatagttgtccattttagaaaataattttgtttcacaatatttgtcattttcaagtttcaatgc 199052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 18355868 - 18355948
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||||||||||  ||||||||||||||||||||||||||    
T  18355868 tactccctccgtttcacaatacttgtccattttgaagaataattttgtttcactttacttgtcactttcaagtttcaatgc 18355948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 13703489 - 13703409
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||| |||||||||||||||||||||||| |  ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  13703489 tactccatccgtttcataatacttgtccattctgaagaataaatttgttttacaatacttgtcactttcaagtttcaatgc 13703409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 26783746 - 26783666
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||| ||||||||| | |||||||||| |||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  26783746 tacttcctccgttttacaatacttgtctattttaaagaataattttgtttcactttacttgtcactttcaagtttcaatgc 26783666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 31873886 - 31873943
Alignment:
Q  230 tgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  31873886 tgtccattttagagaataattttatttcacaatacttgtccctttcaagtttcaatgc 31873943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 43750398 - 43750333
Alignment:
Q  222 ataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||    
T  43750398 ataatacttgtccattttttagaataatttggtttctcaatacttgtcactttcaagtttcaatgc 43750333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 213 - 287
Target Start/End: Complemental strand, 6901831 - 6901758
Alignment:
Q  213 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||| |||| ||||||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||    
T  6901831 ctccgtttcacaata-ttgtccattttggagaataattttgtttcactttacttgtcacttttaagtttcaatgc 6901758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 48436490 - 48436421
Alignment:
Q  218 tttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||| |||| |||||  |||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  48436490 tttcacaatatttgtcacttttggagaataattttgtttcacattacttgtcactttcaagtttcaatgc 48436421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 3755553 - 3755624
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctac 93  Q
    ||||||||||||| ||||||||   |||||||| ||||| |||||||||||||||||||||||||| |||||    
T  3755553 aaggacgtatccggggaataccgacttcgattcccaggaggaacaacgtttgaccagtgcgcatgtctctac 3755624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 54086818 - 54086751
Alignment:
Q  218 tttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaat 285  Q
    ||||| |||||||||||||||| ||||||| ||||||||||   || |||||||||||||||||||||    
T  54086818 tttcacaatacttgtccattttggagaatacttttgtttcattttatttgtcactttcaagtttcaat 54086751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 29135896 - 29136009
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||||||| |||||||| |||||||||| ||||  |||||||  ||| ||||||||||||  |||||  | |||||  ||||| | |||||| ||    
T  29135896 aaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcttccaccatt 29135995  T
Q  122 ggttggttggaaac 135  Q
    ||| ||||||||||    
T  29135996 ggtgggttggaaac 29136009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 51683075 - 51683014
Alignment:
Q  25 gacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    |||||||||| |||||||||| |||||||| ||||  |||||||| ||||||||||||||||    
T  51683075 gacgtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtgcgcatg 51683014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 41219572 - 41219635
Alignment:
Q  18 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcg 82  Q
    |||||||||||||| || |||||||||  |||||||||||||| |||||||||||| ||||||||    
T  41219572 ttctaaggacgtatacg-ggaataccaagttcgattctcaggaggaacaacgtttggccagtgcg 41219635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 928597 - 928647
Alignment:
Q  36 ggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||||||||||||||||||  |||||||  ||||||||||||||||    
T  928597 ggaataccagattcgattctcagggggaacaacacttgaccagtgcgcatg 928647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 19912215 - 19912153
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtc 269  Q
    |||||||||||||||| ||||| ||||||||||||||||   |||||||||| ||||| ||||    
T  19912215 tactccctccgtttcaaaatacatgtccattttagagaaattttttgtttcaaaatacatgtc 19912153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 38806382 - 38806320
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtc 269  Q
    |||||||||||||||| ||||| ||||||||||||||||   |||||||||| ||||| ||||    
T  38806382 tactccctccgtttcaaaatacatgtccattttagagaaattttttgtttcaaaatacatgtc 38806320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 44276771 - 44276837
Alignment:
Q  203 atattactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtc 269  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||   |||||||||| ||||| ||||    
T  44276771 atattactctctccgtttcaaaatacatgtccattttagagaaattttttgtttcaaaatacatgtc 44276837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 287
Target Start/End: Complemental strand, 48963390 - 48963316
Alignment:
Q  213 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||| |||||| ||||| || |||||||||||||||||| ||||| |||| || ||| ||| ||||||||||||    
T  48963390 ctccgattcatattacttatctattttagagaataattttatttcataatatttatcatttttaagtttcaatgc 48963316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 10040536 - 10040652
Alignment:
Q  18 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccac 117  Q
    ||||||||||||| ||| |||||| | | |||||||||||||  |||||||| ||| ||||||||||||  |||||  |||||||  | | | |||||||    
T  10040536 ttctaaggacgtacccggggaatatcgggttcgattctcagg-ggaacaacgcttggccagtgcgcatgcctctacgcacgagccggaatggtcgtccac 10040634  T
Q  118 cgttggttggttggaaac 135  Q
    | ||||| ||||||||||    
T  10040635 ctttggtgggttggaaac 10040652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 32873677 - 32873571
Alignment:
Q  17 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 116  Q
    |||| ||||||||| ||| |||||||||| ||||||||  |||  |||||||| ||||||||||| ||||  ||||| || |||||| ||||| || |||    
T  32873677 attccaaggacgtacccg-ggaataccaggttcgattcctagggagaacaacgcttgaccagtgcacatgcctctacgtatgagccagattagtcgccca 32873579  T
Q  117 ccgttggt 124  Q
    || |||||    
T  32873578 cctttggt 32873571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 12095464 - 12095402
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtc 269  Q
    |||||||||||||||| ||||  ||||||||||||||||   |||||||||| ||||| ||||    
T  12095464 tactccctccgtttcaaaatatatgtccattttagagaaattttttgtttcaaaatacatgtc 12095402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 24064488 - 24064418
Alignment:
Q  216 cgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatg 286  Q
    ||||||| ||||| ||||  |||| |||||||||||| ||||||  ||| |||||||||||||||| ||||    
T  24064488 cgtttcacaatacatgtcgtttttggagaataattttatttcactttacatgtcactttcaagttttaatg 24064418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 198852 - 198893
Alignment:
Q  204 tattactccctccgtttcataatacttgtccattttagagaa 245  Q
    ||||||||||||||||||| ||||| |||||||||| |||||    
T  198852 tattactccctccgtttcaaaatacatgtccattttggagaa 198893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 37293432 - 37293469
Alignment:
Q  202 gatattactccctccgtttcataatacttgtccatttt 239  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  37293432 gataatactccctccgtttcacaatacttgtccatttt 37293469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 6462395 - 6462459
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||||| | |||||||| | |||||||| ||||  |||||||| ||| ||||||||||||    
T  6462395 aaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgcatg 6462459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 25294943 - 25295067
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||||||| |||||||| | || ||||||| ||   ||||||  ||| ||||||||||||  ||||   | |||||  ||||| |||||||| ||    
T  25294943 aaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgcgcatgcctctatgcatgagccggattagtcgtccaccatt 25295042  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    ||| ||||||||| |||||||||||    
T  25295043 ggtgggttggaaaccggtgcgaaag 25295067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 47219127 - 47219251
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||||||| |||||||||| |||||||| || |   ||||||| ||| | ||||||||||  |||||  | |||||  ||||| |||||||| ||    
T  47219127 aaggacgtatccggggaataccaggttcgattcccaagggaaacaacgcttggctagtgcgcatgcctctacgcatgagccggattagtcgtccaccttt 47219226  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    | | ||| ||||| |||||||||||    
T  47219227 gatgggtcggaaaccggtgcgaaag 47219251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 49082803 - 49082871
Alignment:
Q  18 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||||||||||| ||||||||   |||||||| ||||  |||||||| ||  ||||||||||||    
T  49082803 ttctaaggacgtatccggggaataccgagttcgattcccagggagaacaacgcttagccagtgcgcatg 49082871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 52364924 - 52364860
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||| ||| ||||||||   |||||||| ||| | |||||||| ||||||||||||||||    
T  52364924 aaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatg 52364860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 4e-38; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 22388138 - 22388218
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22388138 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 22388218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 207 - 285
Target Start/End: Complemental strand, 23367066 - 23366988
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaat 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23367066 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaat 23366988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 3519184 - 3519105
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatg 286  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3519184 tacttcctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatg 3519105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 1102778 - 1102698
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  1102778 tactccctccgtttcataatacttgtccatttgagagaataattttgtttcacaatactcgtcactttcaagtttcaatgc 1102698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 1646564 - 1646484
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1646564 tactccctccgtttcataatacctgtccattttagagaataattttgtttcacaatacttatcactttcaagtttcaatgc 1646484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 204 - 287
Target Start/End: Original strand, 12969737 - 12969820
Alignment:
Q  204 tattactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||    
T  12969737 tattactccctccgtttcataatacttgtccattttggagaataattttgtttcacaatacatgtctctttcaagtttcaatgc 12969820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 39938447 - 39938367
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  39938447 tactccctccgttttataatacttgtccattttagagaataattttgtttcacaatacttgtcacttttaagttttaatgc 39938367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 37673741 - 37673823
Alignment:
Q  205 attactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||    
T  37673741 attactccttccgtttcataatacttgtccattttagagaataactttgtttcaaaatacttgtcacttccaagtttcaatgc 37673823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 40756911 - 40756991
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||  || |||||||||||||||||||||||    
T  40756911 tactccctccgtttcataatacttgtccattttggagaataattttgtttcactttagttgtcactttcaagtttcaatgc 40756991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 11069856 - 11069974
Alignment:
Q  17 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 116  Q
    |||| ||||||||| ||| |||||||||| ||||||||  |||  |||||||||||| |||||||||||   |||||  ||||||  |||||| ||||||    
T  11069856 attccaaggacgtacccggggaataccaggttcgattccgagggggaacaacgtttggccagtgcgcatacctctacgcacgagctgaattagtcgtcca 11069955  T
Q  117 ccgttggttggttggaaac 135  Q
    |||||||| ||| ||||||    
T  11069956 ccgttggtgggtcggaaac 11069974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 210 - 287
Target Start/End: Complemental strand, 36447532 - 36447455
Alignment:
Q  210 tccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||| ||||| ||||  ||||||||||||||||||||||||  || | ||||||||||| |||||||||    
T  36447532 tccctccgtttcacaatacatgtcgcttttagagaataattttgtttcactttattcgtcactttcaaatttcaatgc 36447455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 287
Target Start/End: Original strand, 37284525 - 37284598
Alignment:
Q  213 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||| ||||||| ||  |||| |||||||||||||||||||  ||||||||| ||||||||||||||||    
T  37284525 ctccgtttcacaatactt-tctcttttggagaataattttgtttcactttacttgtcattttcaagtttcaatgc 37284598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 16034920 - 16034984
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    |||||||||||||||||||||| | ||||||| |||||  |||||||| |||||||||| |||||    
T  16034920 aaggacgtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatg 16034984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 18902653 - 18902529
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    |||||||||  || |||||||| | |||||||| || |  |||||||| ||||||||||||| ||| |||||  |||||||| ||||| || ||||| ||    
T  18902653 aaggacgtactcggggaataccgggttcgattcccacggggaacaacgcttgaccagtgcgcgtgtctctacgcacgagccagattagtcgcccaccttt 18902554  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    ||| ||| ||||| |||||||||||    
T  18902553 ggtgggtcggaaaccggtgcgaaag 18902529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 37560156 - 37560220
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||| |||||||||||||| ||||||||||| |  ||||||||||||  |||||||||||    
T  37560156 aaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgcatg 37560220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 38962746 - 38962810
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||||||| |||||||| | ||||||| |||||| |||||||| ||| ||||||||||||    
T  38962746 aaggacgtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtgcgcatg 38962810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 41187832 - 41187896
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||||||||||||||||  |||| ||||| ||||  ||||||| ||||||||||||||||    
T  41187832 aaggacgtatccgaggaataccgaattcaattcttaggaaaaacaacgcttgaccagtgcgcatg 41187896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 41220618 - 41220742
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||| ||| |||||||| | |||||||| ||||| |||||||| ||| ||||||||||||  |||||  | ||||| |||||| ||| |||| ||    
T  41220618 aaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccgaattagtcgttcaccttt 41220717  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
     || ||| ||||| |||||||||||    
T  41220718 agtgggtcggaaaccggtgcgaaag 41220742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 6358279 - 6358172
Alignment:
Q  17 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 116  Q
    |||| ||||||||||||| ||||||||||||||||||  ||||  |||||||  ||| ||||||||||||  |||||  | |||||  ||||| ||||||    
T  6358279 attcaaaggacgtatccggggaataccagattcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtcca 6358180  T
Q  117 ccgttggt 124  Q
    || |||||    
T  6358179 ccattggt 6358172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 14780023 - 14779972
Alignment:
Q  236 ttttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||| ||||||||||||||||||   ||||||||||||||||||||||||||    
T  14780023 ttttggagaataattttgtttcattttacttgtcactttcaagtttcaatgc 14779972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 331484 - 331597
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||| ||| |||||||| | |||||||| ||||  |||||||  ||| |||||||||||| ||||||  | |||||  ||||| || ||||| ||    
T  331484 aaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcttctacgcatgagccggattagtcgcccaccttt 331583  T
Q  122 ggttggttggaaac 135  Q
    ||| ||||||||||    
T  331584 ggtgggttggaaac 331597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 25540532 - 25540403
Alignment:
Q  17 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 116  Q
    |||| ||||||||||| | |||||||  | ||||||||  |||  |||||||| ||| ||||||||||||  |||||  |||||||  ||||| ||||||    
T  25540532 attccaaggacgtatctggggaatactgggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtcca 25540433  T
Q  117 ccgttggttggttggaaa-cggtgcgaaag 145  Q
    || ||||| ||| ||||| |||||||||||    
T  25540432 cctttggtgggtcggaaaccggtgcgaaag 25540403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 287
Target Start/End: Original strand, 32838964 - 32839009
Alignment:
Q  242 agaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||   ||||||||||||||||||||||||||    
T  32838964 agaataattttgtttcattttacttgtcactttcaagtttcaatgc 32839009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 7747257 - 7747321
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||||||| |||||||| | ||||||||  |||| |||||||||||| |||||| |||||    
T  7747257 aaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgtgcatg 7747321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 10823043 - 10823167
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||| ||| |||||||| | || ||||| ||||| |||||||| ||| ||||||||||||  |||||  |||||||  ||||| || ||||| ||    
T  10823043 aaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccaccttt 10823142  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
     || ||| ||||| |||||||||||    
T  10823143 tgtgggtcggaaaccggtgcgaaag 10823167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 14169732 - 14169608
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    |||||||||| || |||||| | | |||||||||| ||  |||||||  ||||||||||||||||| |||||  | |||||  ||||| |||| ||| ||    
T  14169732 aaggacgtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagtgcgcatgtctctacgcatgagccggattagtcgtctaccatt 14169633  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    ||| ||| ||||| |||||||||||    
T  14169632 ggtgggtcggaaaccggtgcgaaag 14169608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 14853490 - 14853430
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcg 82  Q
    ||||| ||||||| |||||||||||||||||| |||||  ||||||| |||| ||||||||    
T  14853490 aaggatgtatccggggaataccagattcgattttcagggggaacaacttttggccagtgcg 14853430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 15234184 - 15234120
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||| ||| ||||||| || |||||||||||||  |||||||  ||||||||||||||||    
T  15234184 aaggacgtacccggggaatactaggttcgattctcagggggaacaacacttgaccagtgcgcatg 15234120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 21286427 - 21286491
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||||||| |||||||| | |||||||| ||||   ||||||| ||||||||||||||||    
T  21286427 aaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgcatg 21286491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 28110095 - 28110175
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||| ||||||||||| |||| || ||  |||| ||||| ||  |||||||||| ||||||||| ||||||||||||||||    
T  28110095 tacttcctccgtttcacaatatttatcgtttttggagaaaaaacttgtttcacattacttgtcattttcaagtttcaatgc 28110175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 39561895 - 39561970
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||| ||||| ||||  |||| |||||||||||||||||||     |||||||||| || |||||||||    
T  39561895 tactccctccgtttcacaatacatgtcgtttttggagaataattttgtttcac-----ttgtcacttttaaatttcaatgc 39561970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 42770774 - 42770710
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||||||||| |||||| | ||| |||||||||  |||||||| ||| ||||||||||||    
T  42770774 aaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgcgcatg 42770710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 10106574 - 10106641
Alignment:
Q  25 gacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttcta 92  Q
    |||||||||||| |||||| |||||||||||||| | |||||||| ||||  || ||||||| |||||    
T  10106574 gacgtatccgagaaataccggattcgattctcagaaggaacaacgcttgattagcgcgcatgcttcta 10106641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 287
Target Start/End: Complemental strand, 19976568 - 19976525
Alignment:
Q  244 aataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||   ||||||||||||||||||||||||||    
T  19976568 aataattttgtttcattttacttgtcactttcaagtttcaatgc 19976525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 19976930 - 19976859
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctac 93  Q
    ||||||||||||| |||||||| | ||||||| |||||  ||| ||||||||  |||||||||||| |||||    
T  19976930 aaggacgtatccggggaataccgggttcgattttcagggggaataacgtttggtcagtgcgcatgtctctac 19976859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 35946717 - 35946846
Alignment:
Q  17 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 116  Q
    |||||||||||||||||| ||||||||   ||||||||  |||  |||||||| ||| ||| || |||||  |||||  |||||||  ||||| ||||||    
T  35946717 attctaaggacgtatccggggaataccgagttcgattcctagg-ggaacaacgcttggccattgtgcatgcctctacgcacgagccggattagtcgtcca 35946815  T
Q  117 ccgttggttggttggaaac-ggtgcgaaagg 146  Q
    || ||||| ||| |||||| |||||||||||    
T  35946816 ccattggtgggtcggaaactggtgcgaaagg 35946846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 10026723 - 10026626
Alignment:
Q  38 aataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggttggttggaaac 135  Q
    |||||| | |||||||||||||  |||||||||||| ||||||||||||  |||||  | |||||  ||||| || ||||| ||||| ||| ||||||    
T  10026723 aataccgggttcgattctcagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaac 10026626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 39201631 - 39201518
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    |||||||||  |||||||||||  ||||||||||||||  |||||| ||||| |||||| |||||  |||||  | |||||  ||||| ||| |||| ||    
T  39201631 aaggacgtactcgaggaataccgaattcgattctcagggggaacaatgtttggccagtgtgcatgcctctacgcatgagccggattagtcgttcaccttt 39201532  T
Q  122 ggttggttggaaac 135  Q
    ||| ||| ||||||    
T  39201531 ggtgggtcggaaac 39201518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 2550851 - 2550975
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||||||| |||||| | | |||||||| ||||| |||||||  ||  ||||||||||||| |||||  | |||||  ||||| || ||||  ||    
T  2550851 aaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgcgcatgtctctacgcatgagccggattagtcgcccactttt 2550950  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    ||| ||||| ||| |||||||||||    
T  2550951 ggtgggttgaaaaccggtgcgaaag 2550975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 34130408 - 34130301
Alignment:
Q  38 aataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggttggttggaaa-cg 136  Q
    |||| ||| ||||||| |||||| |||||||||||||||| ||| ||||| |||||  | |||||| ||||| |||| ||| ||||| | | ||||| ||    
T  34130408 aatatcaggttcgattttcagga-gaacaacgtttgaccattgcacatgtctctacgcatgagccagattagtcgtctaccattggtagatcggaaatcg 34130310  T
Q  137 gtgcgaaag 145  Q
    |||||||||    
T  34130309 gtgcgaaag 34130301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 39807008 - 39806944
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||| ||| |||||||| | |||||||| || ||  ||||||||||| ||||||||||||    
T  39807008 aaggacgtacccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatg 39806944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 4e-38; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 40783657 - 40783737
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40783657 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 40783737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 321904 - 321823
Alignment:
Q  206 ttactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  321904 ttactccctccgtttcataatacttgtccattttagagaatatttttgtttcacaatacttgtcactttcaagtttcaatgc 321823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 284610 - 284530
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  284610 tactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcactttcaagtttcaatgc 284530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 23045279 - 23045359
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23045279 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgc 23045359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 23526516 - 23526436
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  23526516 tactccctccgtttcataatacttgtccattttgaagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 23526436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 24771906 - 24771986
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  24771906 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacatgtctctttcaagtttcaatgc 24771986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 47037852 - 47037932
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  47037852 tactccctccgtttcataatacttgtctattttaaagaataattttgttttacaatacttgtcactttcaagtttcaatgc 47037932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 202 - 287
Target Start/End: Complemental strand, 33083026 - 33082941
Alignment:
Q  202 gatattactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||| |||||||||    
T  33083026 gataatactccctccgtttcataatacttgtccattttaaagaataattttgtttcacaatacatgtctctttcaaatttcaatgc 33082941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 46771910 - 46771836
Alignment:
Q  212 cctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatg 286  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||||||||||||||||||    
T  46771910 cctccgtttcataatacttgttcattttgaagaataattttgtttcacaatacttatcactttcaagtttcaatg 46771836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 51064754 - 51064834
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||| || |||||| ||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  51064754 tactccgtctgtttcacaatacttgtccattttagagaataattttgtttcactttatttgtcactttcaagtttcaatgc 51064834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 213 - 287
Target Start/End: Original strand, 27210961 - 27211035
Alignment:
Q  213 ctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||    
T  27210961 ctccgtttcataatatttgtccatttttaagaataattttgtttcacaatacttgtcacatttaagtttcaatgc 27211035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 40562293 - 40562366
Alignment:
Q  214 tccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||| ||||||||||||||||||  ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  40562293 tccgttttataatacttgtccattttgaagaatgattttgttttacaatacttgtcactttcaagtttcaatgc 40562366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 31003787 - 31003867
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||| |||||| ||||||| ||  |||| |||||||||||||||||||| |||||| |||||||||||||||||||    
T  31003787 tactccctctgtttcacaatacttatcgcttttggagaataattttgtttcacattacttgccactttcaagtttcaatgc 31003867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 212 - 287
Target Start/End: Complemental strand, 14925734 - 14925659
Alignment:
Q  212 cctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||| ||||||||||  |||||||| |||||||||||||||  ||||||||  ||||||||||||||||    
T  14925734 cctccgtttcacaatacttgtcgtttttagagcataattttgtttcactttacttgtcgttttcaagtttcaatgc 14925659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 242 - 287
Target Start/End: Original strand, 40261320 - 40261365
Alignment:
Q  242 agaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  40261320 agaataattttgtttcacattacttgtcactttcaagtttcaatgc 40261365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 18396971 - 18396891
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||| ||||| |||||||||   |||| |||||||||||||||| |||  | |||||||||||||||||||||||    
T  18396971 tactccctccatttcacaatacttgttgcttttggagaataattttgttttacataatttgtcactttcaagtttcaatgc 18396891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 34458724 - 34458804
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||| ||||||||| ||||  ||||  |||| |||||||||||||||||||  ||||||||||||||||||||| ||||    
T  34458724 tactccttccgtttcacaatatatgtcgcttttggagaataattttgtttcactttacttgtcactttcaagtttcgatgc 34458804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 12744647 - 12744576
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctac 93  Q
    ||||||||||| |||||||| ||||||||||| |||||  |||||||| ||||| ||||||||||| |||||    
T  12744647 aaggacgtatctgaggaatatcagattcgattttcagggggaacaacgcttgactagtgcgcatgtctctac 12744576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 12755637 - 12755566
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctac 93  Q
    ||||||||||| |||||||| ||||||||||| |||||  |||||||| ||||| ||||||||||| |||||    
T  12755637 aaggacgtatctgaggaatatcagattcgattttcagggggaacaacgcttgactagtgcgcatgtctctac 12755566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 23166858 - 23166929
Alignment:
Q  214 tccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaat 285  Q
    ||||||||| |||||| |||  ||||||||||||||||||||||||| || || | ||||||||||||||||    
T  23166858 tccgtttcacaatactcgtcgcttttagagaataattttgtttcacattatttattactttcaagtttcaat 23166929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 285
Target Start/End: Original strand, 27143014 - 27143090
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaat 285  Q
    |||||| |||| ||||||||| |||||  |||| |||||||||||||||||||| ||||||||||  ||||||||||||    
T  27143014 tactccatccgcttcataataattgtcgcttttggagaataattttgtttcacattacttgtcac--tcaagtttcaat 27143090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 287
Target Start/End: Original strand, 40052501 - 40052544
Alignment:
Q  244 aataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  40052501 aataattttgtttcacattacttgtcactttcaagtttcaatgc 40052544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 9659307 - 9659179
Alignment:
Q  17 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 116  Q
    ||||||||||||||  || |||||||| | |||||||| ||||  |||||||||||||| ||||||||||  | |||  | |||||  ||||| ||||||    
T  9659307 attctaaggacgtactcggggaataccgggttcgattcccaggg-gaacaacgtttgactagtgcgcatgcctttacgcatgagccggattagtcgtcca 9659209  T
Q  117 ccgttggttggttggaaa-cggtgcgaaag 145  Q
    || ||||| ||||||||| |||||||||||    
T  9659208 cctttggtgggttggaaaccggtgcgaaag 9659179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 24876831 - 24876758
Alignment:
Q  214 tccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||| ||| ||||||||||  |||| ||||||||||||||||||   |||||||||||||||||| |||||||    
T  24876831 tccgtctcacaatacttgtcgtttttggagaataattttgtttcattttacttgtcactttcaagtgtcaatgc 24876758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 1749515 - 1749471
Alignment:
Q  243 gaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||    
T  1749515 gaataattttgtttcacaatacttgttacttttaagtttcaatgc 1749471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 45726557 - 45726486
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctac 93  Q
    ||||||||| |||||||||||| | |||||||||||||| ||| ||| |||| |||||||| |||| |||||    
T  45726557 aaggacgtacccgaggaatacctggttcgattctcaggaggaataacatttggccagtgcgtatgtctctac 45726486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 3943804 - 3943742
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtc 269  Q
    |||||||||||||||| ||||| ||||||||||||||||   |||||||||| ||||| ||||    
T  3943804 tactccctccgtttcaaaatacatgtccattttagagaaattttttgtttcaaaatacatgtc 3943742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 41959850 - 41959788
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtc 269  Q
    |||||||||||||||| ||||| ||||||||||||||||   |||||||||| ||||| ||||    
T  41959850 tactccctccgtttcaaaatacatgtccattttagagaaattttttgtttcaaaatacatgtc 41959788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 51065037 - 51064995
Alignment:
Q  203 atattactccctccgtttcataatacttgtccattttagagaa 245  Q
    |||||||||||||||||||| ||||||||||||||||| ||||    
T  51065037 atattactccctccgtttcacaatacttgtccattttaaagaa 51064995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 5855506 - 5855570
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    |||||||||| || |||||||| | |||||||| ||||| |||||||| ||| ||||||||||||    
T  5855506 aaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatg 5855570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 8763975 - 8764099
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||| ||| |||||| | | |||| ||| ||||  |||||||  ||| ||||||||||||  |||||  |||||||  ||||| |||||||||||    
T  8763975 aaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgtccaccgtt 8764074  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    ||| ||| ||||| |||||||||||    
T  8764075 ggtgggtcggaaaccggtgcgaaag 8764099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 16263529 - 16263593
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||||| | |||||||||| |||||||  ||||| |||||||| ||| ||||||||||||    
T  16263529 aaggacgtatctggggaataccaggttcgatttccaggaggaacaacgcttggccagtgcgcatg 16263593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 18649476 - 18649352
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||||| |  ||||| | | ||||||| |||||  |||||||| ||||||||||||||||  ||||| ||||||||| ||||  || ||||| ||    
T  18649476 aaggacgtatctggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgtacgagccagattaatcgcccaccttt 18649377  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
     || | ||||||| |||||||||||    
T  18649376 agtggattggaaaccggtgcgaaag 18649352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 31734273 - 31734368
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccacc 118  Q
    ||||| ||| |||||||||||  ||||||||||| |||   ||||||| ||| ||||||||||||  ||||| ||||||||||||||  ||||||||    
T  31734273 aaggatgtacccgaggaatactggattcgattct-aggggaaacaacgattggccagtgcgcatgcctctacgtacgagccaaattaatcgtccacc 31734368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 41663984 - 41663856
Alignment:
Q  18 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccac 117  Q
    ||||||||||||||||| |||||||| | |||||||| ||||  |||||||  |||  |||||||||||  |||||  | ||||   ||||| |||||||    
T  41663984 ttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagtcgtccac 41663885  T
Q  118 cgttggttggttggaaa-cggtgcgaaag 145  Q
    | ||||| ||| ||||| |||||||||||    
T  41663884 cattggtgggtcggaaaccggtgcgaaag 41663856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 45362006 - 45361942
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||| ||  |||||||| | |||||||||||||| |||||||| ||| ||||||||||||    
T  45362006 aaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatg 45361942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 49078094 - 49078222
Alignment:
Q  18 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccac 117  Q
    ||||||||||||||||| |||||||| | |||||||| ||||   ||||||  ||| ||||||||||||  |||||  | |||||  ||||| ||| |||    
T  49078094 ttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgttcac 49078193  T
Q  118 cgttggttggttggaaa-cggtgcgaaag 145  Q
    | ||||| ||| ||||| |||||||||||    
T  49078194 cattggtaggtcggaaaccggtgcgaaag 49078222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 51437453 - 51437517
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    |||||||||||||||||||| | | |||||||| || |  |||||||| ||||||||||||||||    
T  51437453 aaggacgtatccgaggaatatcgggttcgattcccatggggaacaacgcttgaccagtgcgcatg 51437517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 25929368 - 25929298
Alignment:
Q  214 tccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaa 284  Q
    ||||||||| ||||||||||  ||||| |||||||||||||||||    ||||| | ||||||||||||||    
T  25929368 tccgtttcacaatacttgtcgcttttaaagaataattttgtttcatttcacttgcccctttcaagtttcaa 25929298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 31061463 - 31061539
Alignment:
Q  214 tccgtttcataatacttgtccattttagagaataattttgtttcacaatact---tgtcactttcaagtttcaatgc 287  Q
    ||||||||| ||||||||||  |||| || ||||||||| ||||||| ||||   ||||||| ||||||||||||||    
T  31061463 tccgtttcacaatacttgtcacttttggaaaataattttatttcacattactacttgtcactctcaagtttcaatgc 31061539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 284330 - 284371
Alignment:
Q  204 tattactccctccgtttcataatacttgtccattttagagaa 245  Q
    ||||||||||||||||||| ||||| |||||||||| |||||    
T  284330 tattactccctccgtttcaaaatacatgtccattttggagaa 284371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 2567260 - 2567373
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    |||||||||| ||  ||||||| | ||||||| || ||   ||||||| ||| ||||||||||||  |||||| ||||| || |||||||||||| | ||    
T  2567260 aaggacgtattcggagaataccgggttcgattttcggggaaaacaacgcttggccagtgcgcatgcctctactcacgagtcagattagccgtccatcttt 2567359  T
Q  122 ggttggttggaaac 135  Q
    ||| ||| ||||||    
T  2567360 ggtgggtcggaaac 2567373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 264
Target Start/End: Complemental strand, 9589672 - 9589615
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatac 264  Q
    |||||||||||||||| ||||| |||| |||||||||||   |||||||||| |||||    
T  9589672 tactccctccgtttcaaaatacatgtctattttagagaaattttttgtttcaaaatac 9589615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 13265917 - 13265954
Alignment:
Q  17 attctaaggacgtatccgaggaataccagattcgattc 54  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  13265917 attctaaggacgtatccgaggaatacctggttcgattc 13265954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 23045559 - 23045518
Alignment:
Q  204 tattactccctccgtttcataatacttgtccattttagagaa 245  Q
    ||||||||||||||||||| ||||| |||||||||| |||||    
T  23045559 tattactccctccgtttcaaaatacatgtccattttggagaa 23045518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 34334424 - 34334355
Alignment:
Q  17 attctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    |||| ||||||||||||| |||||||| | |||||||| ||||  |||||||  ||| ||||||||||||    
T  34334424 attccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatg 34334355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 14350510 - 14350554
Alignment:
Q  243 gaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||| | | ||||||||||||| ||||||||||||    
T  14350510 gaataattttgttttatattacttgtcactttaaagtttcaatgc 14350554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 16956450 - 16956514
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||| ||| ||||||||   |||| ||||||||   ||||||||||||||||||||||||    
T  16956450 aaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatg 16956514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 17358595 - 17358531
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||||  | |||||||| | |||||||||||||  |||||||| ||||||| ||||||||    
T  17358595 aaggacgtatttggggaataccgggttcgattctcagggagaacaacgcttgaccaatgcgcatg 17358531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 18808249 - 18808313
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    |||||||||||  ||||||| ||| ||| ||||||||   |||||||| ||||||||||||||||    
T  18808249 aaggacgtatctaaggaataacaggttcaattctcagagggaacaacgcttgaccagtgcgcatg 18808313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 26325796 - 26325920
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    |||||||||||||||||||| | | |||||||| |||   |||||||  |||  |||||||||||  |||||  | |||||  ||||| |||||||| ||    
T  26325796 aaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccaccatt 26325895  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    ||| ||| ||||| |||||||||||    
T  26325896 ggtgggtcggaaaccggtgcgaaag 26325920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 41959076 - 41959116
Alignment:
Q  205 attactccctccgtttcataatacttgtccattttagagaa 245  Q
    |||||||||||||||||| ||||| |||||||||| |||||    
T  41959076 attactccctccgtttcaaaatacatgtccattttggagaa 41959116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 44969653 - 44969712
Alignment:
Q  26 acgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||| ||||| |||||||| |||||||||||||| |||||||| ||| |||||| |||||    
T  44969653 acgtacccgagaaataccaggttcgattctcagga-gaacaacgcttggccagtgtgcatg 44969712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 50503485 - 50503421
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||||||| |||||| | | |||||||| ||||  |||||||  ||||||||||||||||    
T  50503485 aaggacgtatccggggaatatcgggttcgattcccagggggaacaacacttgaccagtgcgcatg 50503421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 204 - 287
Target Start/End: Complemental strand, 441 - 358
Alignment:
Q  204 tattactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  441 tattactccctccgtttcataatacttgtccattttagaaaataattttgtttcacaatacttgtcactttcaagtttcaatgc 358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 204 - 287
Target Start/End: Complemental strand, 4129706 - 4129623
Alignment:
Q  204 tattactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4129706 tattactccctccgtttcataatacttgtccattttagaaaataattttgtttcacaatacttgtcactttcaagtttcaatgc 4129623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 7761577 - 7761497
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7761577 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatatttgtcactttcaagtttcaatgc 7761497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 8626759 - 8626679
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8626759 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtccctttcaagtttcaatgc 8626679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 13757484 - 13757404
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13757484 tactccatccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 13757404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 207 - 285
Target Start/End: Complemental strand, 1605855 - 1605777
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaat 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1605855 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaaatttcaat 1605777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 29260469 - 29260389
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  29260469 tactccctccgtttcataatacttgtccattttagagaataattttgtttcaaaatacttgtcattttcaagtttcaatgc 29260389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 207 - 285
Target Start/End: Original strand, 15064695 - 15064773
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaat 285  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  15064695 tactccctccgtttcataatacttgtccattttggagaataattttgtttcataatacttgtcactttcaagtttcaat 15064773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 8235895 - 8235822
Alignment:
Q  214 tccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8235895 tccgtttcataatacttgtctattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 8235822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 17942720 - 17942640
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||    
T  17942720 tactccctccgtttcataatacttgtccattttggagaataattttgttttataatacttgtcactttcaagtttcaatgc 17942640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 31559738 - 31559818
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  31559738 tactccctccgtttcataatacttctccattttagagaataattttattttacaatacttgttactttcaagtttcaatgc 31559818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 30734481 - 30734563
Alignment:
Q  205 attactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||| ||||| |||||||||||||||||||||| || ||||||||||||| |||||| |||||| |||||| |||||||||    
T  30734481 attacttcctccttttcataatacttgtccattttggaaaataattttgttttacaatagttgtcattttcaaatttcaatgc 30734563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 12606421 - 12606541
Alignment:
Q  26 acgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggtt 125  Q
    ||||||||| ||||||||||||||||||  ||||  |||||||||||| ||||||||||||  |||||  |||||||  ||||| || ||||| |||||     
T  12606421 acgtatccggggaataccagattcgatttccagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtg 12606520  T
Q  126 ggttggaaa-cggtgcgaaag 145  Q
     | |||||| |||||||||||    
T  12606521 agctggaaaccggtgcgaaag 12606541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 3601075 - 3601195
Alignment:
Q  26 acgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggtt 125  Q
    |||||| || |||||||| | |||||||||||||  |||||||| ||| ||||||||||||  | |||  |||||||  ||||| |||||||| |||||     
T  3601075 acgtattcggggaataccggtttcgattctcagggggaacaacgcttggccagtgcgcatgcctatacacacgagccggattagtcgtccacctttggtg 3601174  T
Q  126 ggttggaaa-cggtgcgaaag 145  Q
    ||| ||||| |||||||||||    
T  3601175 ggtcggaaaccggtgcgaaag 3601195  T

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Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 13468920 - 13469044
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||||||| |||||||||| ||| ||||  |||  |||||||| |||  |||||| ||||  |||||  |||||||| ||||| || ||||| ||    
T  13468920 aaggacgtatccggggaataccaggttcaattcctagggggaacaacgattggtcagtgcacatgcctctacgcacgagccagattagtcgcccaccatt 13469019  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    ||| ||||||||| |||||||||||    
T  13469020 ggtgggttggaaaccggtgcgaaag 13469044  T

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Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 19089485 - 19089609
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    |||||||||||||||||||||||| || ||||| ||||  |||||||  ||| |||||| |||||  |||||  |||||||  ||||| |||| ||| ||    
T  19089485 aaggacgtatccgaggaataccaggtttgattcccagggggaacaacacttggccagtgagcatgcctctacgcacgagccggattagtcgtctaccttt 19089584  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    ||| ||| ||||| |||||||||||    
T  19089585 ggtgggtcggaaaccggtgcgaaag 19089609  T

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Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 20398238 - 20398318
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||| ||||||| ||||| ||||  |||| || ||||||||||||||||  |||||| ||||||||||||| |||||    
T  20398238 tactcccttcgtttcacaatacatgtcacttttggaaaataattttgtttcactttacttgccactttcaagttttaatgc 20398318  T

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Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 21898635 - 21898699
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||||||||| |||||||| | |||||||| ||||| |||||||| ||| ||||||||||||    
T  21898635 aaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatg 21898699  T

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Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 19996322 - 19996384
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtc 269  Q
    |||||||||||||||| ||||| ||||||||||||||||   |||||||||| ||||| ||||    
T  19996322 tactccctccgtttcaaaatacatgtccattttagagaaattttttgtttcaaaatacatgtc 19996384  T

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Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 34954742 - 34954629
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||| | | |||||||||| |||||||||||||  |||||||||||| ||||||| |||   |||||  | |||||| ||||| |||||||| ||    
T  34954742 aaggacgtacctggggaataccaggttcgattctcagggggaacaacgtttggccagtgcacatacctctacgcatgagccagattagtcgtccaccttt 34954643  T
Q  122 ggttggttggaaac 135  Q
    | | ||| ||||||    
T  34954642 gatgggtcggaaac 34954629  T

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Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 3798376 - 3798296
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||| | |||||||||  ||||  ||||| | |||| |||||||||||  |||||||||||||||||||| |||||    
T  3798376 tactccctctgcttcataatatatgtcgtttttaaataatagttttgtttcactttacttgtcactttcaagttttaatgc 3798296  T

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Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 6606220 - 6606096
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||||||||||| |||||||| | |||||||||||||  |||||||  ||| ||||||  ||||  |||||  | |||||  ||||| |||||||| ||    
T  6606220 aaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgtacatgcctctacgcatgagccggattagtcgtccaccatt 6606121  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    ||| ||| ||||| |||||||||||    
T  6606120 ggtgggtcggaaaccggtgcgaaag 6606096  T

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Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 13584573 - 13584509
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    |||||||||  ||||||||||||| ||||||||  | || |||||||||||| ||||||||||||    
T  13584573 aaggacgtactcgaggaataccaggttcgattcctaagatgaacaacgtttggccagtgcgcatg 13584509  T

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Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 15064971 - 15064933
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaa 245  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  15064971 tactccctccgtttcaaaatacatgtccattttagagaa 15064933  T

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Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 33939994 - 33940092
Alignment:
Q  18 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtcca 116  Q
    |||||||||||||||||||||||||  | || ||||||||||| ||||||   || |||| ||||||||  |||||  |||||||  ||||| ||||||    
T  33939994 ttctaaggacgtatccgaggaatactgggtttgattctcaggaggaacaatacttaaccattgcgcatgcctctacacacgagccggattagtcgtcca 33940092  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 2271424 - 2271330
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccacc 118  Q
    |||||||||| || |||||||| | ||||||||||||   |||||||| ||  ||||||||||||| |||||  |||||||  ||||| ||||||||    
T  2271424 aaggacgtattcggggaataccgggttcgattctcaga--gaacaacgcttagccagtgcgcatgtctctacgcacgagccggattagtcgtccacc 2271330  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 8938705 - 8938822
Alignment:
Q  29 tatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgttggttggt 128  Q
    |||||| |||||||  | |||||||| ||||| |||||||  |||||||||||||| |  |||||  | ||||| |||||| |||||||| ||| | |||    
T  8938705 tatccggggaatacttggttcgattcccaggaggaacaacacttgaccagtgcgcaagcatctacgcatgagccgaattagtcgtccacctttgatgggt 8938804  T
Q  129 tggaaa-cggtgcgaaag 145  Q
     ||||| |||||||||||    
T  8938805 cggaaaccggtgcgaaag 8938822  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 14107478 - 14107417
Alignment:
Q  25 gacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatg 86  Q
    ||||||| || |||||||| | |||||||| ||||| |||||||| ||||||||||| ||||    
T  14107478 gacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgcacatg 14107417  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 13036127 - 13036003
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    |||||||||| || |||||| | | ||||||| |||||  |||||||  ||| ||||||||||||  |||||  | |||||| ||||| |||||||  ||    
T  13036127 aaggacgtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagattagtcgtccactatt 13036028  T
Q  122 ggttggttggaaa-cggtgcgaaag 145  Q
    ||| ||| ||||| |||||||||||    
T  13036027 ggtgggtcggaaaccggtgcgaaag 13036003  T

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Target: scaffold0054 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 204 - 287
Target Start/End: Complemental strand, 45733 - 45650
Alignment:
Q  204 tattactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||    
T  45733 tattactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacatgtctctttcaaatttcaatgc 45650  T

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Target: scaffold0062 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 287 - 347
Alignment:
Q  227 acttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||    
T  287 acttgtccattttagagaataattttgtttcacaatacttgtcacttttaaattttaatgc 347  T

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Target: scaffold0168 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 7945 - 7865
Alignment:
Q  207 tactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||| || |||||| ||||||||||  ||||| |||||||||||  |||||| |||||||||||||||||||| |||||    
T  7945 tactccatctgtttcacaatacttgtcgtttttaaagaataattttaattcacattacttgtcactttcaagttttaatgc 7865  T

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Target: scaffold0170 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 9831 - 9933
Alignment:
Q  22 aaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttctacttacgagccaaattagccgtccaccgtt 121  Q
    ||||| ||||| |||||||||| |||||||||  ||||  |||||||| ||| ||||||||||||  |||||  |||||||  ||||| |||||||| ||    
T  9831 aaggatgtatctgaggaataccggattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccaccttt 9930  T
Q  122 ggt 124  Q
    |||    
T  9931 ggt 9933  T

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Target: scaffold0056 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 71350 - 71280
Alignment:
Q  217 gtttcataatacttgtccattttagagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||| ||||||||||  ||||  ||||||||||| ||||||| ||||||||||||| |||||| |||||    
T  71350 gtttcacaatacttgtcgtttttgaagaataattttatttcacattacttgtcacttttaagtttgaatgc 71280  T

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Target: scaffold0257 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 23916 - 23851
Alignment:
Q  204 tattactccctccgtttcataatacttgtccattttagagaataattttgtttcacaatacttgtc 269  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||   |||||||||| ||||| ||||    
T  23916 tattactccatccgtttcaaaatacatgtccattttagagaaattttttgtttcaaaatacatgtc 23851  T

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Target: scaffold0635 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 2210 - 2143
Alignment:
Q  25 gacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgcgcatgtttcta 92  Q
    |||||||||||| |||||| |||||||||||||| | |||||||| ||||  || ||||||| |||||    
T  2210 gacgtatccgagaaataccggattcgattctcagaaggaacaacgcttgattagcgcgcatgcttcta 2143  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 249432 - 249369
Alignment:
Q  18 ttctaaggacgtatccgaggaataccagattcgattctcaggacgaacaacgtttgaccagtgc 81  Q
    ||||||||||||||  | |||||||||| |||||||||||||  ||| |||| |||||||||||    
T  249432 ttctaaggacgtatttggggaataccaggttcgattctcagggagaataacgcttgaccagtgc 249369  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 65199 - 65245
Alignment:
Q  241 gagaataattttgtttcacaatacttgtcactttcaagtttcaatgc 287  Q
    |||||||||||||||||| | ||||||||||||| || |||||||||    
T  65199 gagaataattttgtttcatattacttgtcacttttaaatttcaatgc 65245  T

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