View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7693_low_18 (Length: 249)
Name: NF7693_low_18
Description: NF7693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7693_low_18 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 13022809 - 13022599
Alignment:
| Q |
1 |
cagacagtgacttgtgttccaaggttcttaaagagttacttgttttgcaagctacctatgagctatggctgccacaccatcactagcagctatgacagtt |
100 |
Q |
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| T |
13022809 |
cagacagtgacttgtgttccaaggttcttaaagagttacttgttttgcaagctacctatgagctatggctgccacaccatcactagcagctatgacagtt |
13022710 |
T |
|
| Q |
101 |
aggaattctgttattctctgcctttcttttccttgtatcgtgcaccttgacatgttctatacatagcagtctttgtatccaagttaaactaacgtataag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13022709 |
aggaattctgttattctctgcctttcttttccttgtatcgtgcaccttgacatgttctatacatagcagtctttgtatccaagttaaactaacgtataag |
13022610 |
T |
|
| Q |
201 |
gatgtacttct |
211 |
Q |
| |
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||||||||||| |
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| T |
13022609 |
gatgtacttct |
13022599 |
T |
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