View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7693_low_20 (Length: 237)
Name: NF7693_low_20
Description: NF7693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7693_low_20 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 30900834 - 30900613
Alignment:
| Q |
1 |
cccagtctcttttgatggaatccattttggaacaaacaaaaacaaaaggaagattaagtattaagatttcagtacatgatcgacaataccttctagattt |
100 |
Q |
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| T |
30900834 |
cccagtctcttttgatggaatccatttcggaacaaacaaaaacaaaaggaagattaagtattaagatttcagtaaatgatcgacaataccttctagattt |
30900735 |
T |
|
| Q |
101 |
cattttaaggaattttattgagaaattatacatgaattcaagtctagcagcctttagagttgcactaaagtaaattcaactgtggaatgtttgctttgcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30900734 |
cattttaaggaattttattgagaaattatacatgaattcaagtctagcagcctttagagttgcactaaagtaaattcaactgtggaatgtttgctttgcc |
30900635 |
T |
|
| Q |
201 |
aatgaagataccagaaagacat |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
30900634 |
aatgaagataccagaaagacat |
30900613 |
T |
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