View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7693_low_22 (Length: 233)

Name: NF7693_low_22
Description: NF7693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7693_low_22
NF7693_low_22
[»] chr7 (31 HSPs)
chr7 (1-233)||(18023704-18023936)
chr7 (1-47)||(3830093-3830139)
chr7 (1-47)||(3671849-3671895)
chr7 (1-47)||(30857273-30857319)
chr7 (2-47)||(10242506-10242551)
chr7 (1-46)||(20085750-20085795)
chr7 (1-45)||(19599170-19599214)
chr7 (1-44)||(47342427-47342470)
chr7 (1-47)||(12167432-12167478)
chr7 (1-47)||(20763179-20763225)
chr7 (1-47)||(25288689-25288735)
chr7 (1-47)||(27462426-27462472)
chr7 (1-47)||(27833391-27833437)
chr7 (1-47)||(28736623-28736669)
chr7 (1-47)||(29488745-29488791)
chr7 (1-47)||(33232387-33232433)
chr7 (1-47)||(34284529-34284575)
chr7 (1-38)||(6781832-6781869)
chr7 (1-38)||(18714473-18714510)
chr7 (2-47)||(21322201-21322246)
chr7 (2-47)||(21554924-21554969)
chr7 (2-35)||(26717930-26717963)
chr7 (1-46)||(27263366-27263411)
chr7 (1-38)||(38374190-38374227)
chr7 (1-38)||(47155103-47155140)
chr7 (1-46)||(48629056-48629101)
chr7 (1-41)||(1720074-1720114)
chr7 (1-37)||(10244752-10244788)
chr7 (1-37)||(33473521-33473557)
chr7 (1-37)||(34448610-34448646)
chr7 (2-46)||(37495909-37495953)
[»] chr1 (25 HSPs)
chr1 (1-47)||(44243898-44243944)
chr1 (1-47)||(29987102-29987148)
chr1 (1-47)||(32950751-32950797)
chr1 (1-47)||(32962588-32962634)
chr1 (1-47)||(45139996-45140042)
chr1 (1-38)||(5907824-5907861)
chr1 (2-46)||(48264462-48264506)
chr1 (1-44)||(12268977-12269020)
chr1 (1-47)||(8269358-8269404)
chr1 (1-39)||(9929229-9929267)
chr1 (1-47)||(17139507-17139553)
chr1 (1-47)||(23405348-23405394)
chr1 (1-47)||(27533268-27533314)
chr1 (1-39)||(37045144-37045182)
chr1 (1-47)||(39252136-39252182)
chr1 (1-47)||(39252247-39252293)
chr1 (1-47)||(42045362-42045408)
chr1 (1-47)||(42440138-42440184)
chr1 (2-47)||(5869790-5869835)
chr1 (1-46)||(16475904-16475949)
chr1 (1-38)||(25532998-25533035)
chr1 (2-47)||(46579640-46579684)
chr1 (1-37)||(17283976-17284012)
chr1 (1-37)||(32497481-32497517)
chr1 (1-37)||(50040381-50040417)
[»] chr8 (28 HSPs)
chr8 (1-47)||(42172233-42172279)
chr8 (1-46)||(29652243-29652288)
chr8 (1-47)||(8881300-8881346)
chr8 (1-47)||(18533694-18533740)
chr8 (2-47)||(8999881-8999926)
chr8 (1-46)||(11709011-11709056)
chr8 (1-46)||(27718885-27718930)
chr8 (1-44)||(8461829-8461872)
chr8 (1-36)||(44794918-44794953)
chr8 (1-47)||(943122-943168)
chr8 (1-47)||(6447214-6447260)
chr8 (5-47)||(8043899-8043941)
chr8 (1-47)||(12748926-12748972)
chr8 (1-47)||(12800890-12800936)
chr8 (1-47)||(19163526-19163572)
chr8 (1-47)||(20469301-20469347)
chr8 (1-47)||(20665353-20665399)
chr8 (1-47)||(26932753-26932799)
chr8 (1-47)||(29376926-29376972)
chr8 (1-47)||(29499796-29499842)
chr8 (1-47)||(30550716-30550762)
chr8 (1-47)||(32051522-32051568)
chr8 (1-39)||(33105416-33105454)
chr8 (1-47)||(44215465-44215511)
chr8 (1-30)||(29908036-29908065)
chr8 (1-38)||(31336806-31336843)
chr8 (1-38)||(35198536-35198573)
chr8 (2-46)||(41625220-41625264)
[»] chr6 (14 HSPs)
chr6 (1-47)||(18253329-18253375)
chr6 (1-46)||(32524411-32524456)
chr6 (1-47)||(788891-788937)
chr6 (1-43)||(13496141-13496183)
chr6 (1-47)||(247684-247730)
chr6 (1-47)||(7082982-7083028)
chr6 (1-47)||(8569734-8569780)
chr6 (1-43)||(12333562-12333604)
chr6 (1-47)||(15187088-15187134)
chr6 (1-47)||(15473472-15473518)
chr6 (1-47)||(24373700-24373746)
chr6 (1-47)||(26489938-26489984)
chr6 (1-38)||(28898881-28898918)
chr6 (1-46)||(33542798-33542843)
[»] chr4 (46 HSPs)
chr4 (1-47)||(23775543-23775589)
chr4 (1-47)||(31760271-31760317)
chr4 (3-47)||(18094432-18094476)
chr4 (4-39)||(48694648-48694683)
chr4 (1-47)||(11949753-11949799)
chr4 (1-47)||(20383513-20383559)
chr4 (1-47)||(21318243-21318289)
chr4 (1-47)||(24079830-24079876)
chr4 (1-47)||(38453290-38453336)
chr4 (1-46)||(19479468-19479513)
chr4 (1-36)||(10148204-10148239)
chr4 (1-36)||(29908081-29908116)
chr4 (1-36)||(50362140-50362175)
chr4 (1-39)||(675943-675981)
chr4 (1-47)||(2649723-2649769)
chr4 (1-47)||(9946452-9946498)
chr4 (1-47)||(10261759-10261805)
chr4 (1-47)||(16470329-16470375)
chr4 (1-47)||(17423167-17423213)
chr4 (1-47)||(19588179-19588225)
chr4 (1-47)||(21114295-21114341)
chr4 (1-47)||(21317328-21317374)
chr4 (1-47)||(21562650-21562696)
chr4 (1-47)||(26926700-26926746)
chr4 (1-47)||(28435238-28435284)
chr4 (1-47)||(30850374-30850420)
chr4 (1-47)||(31780770-31780815)
chr4 (1-47)||(33495590-33495636)
chr4 (1-47)||(38374982-38375028)
chr4 (1-43)||(40070962-40071004)
chr4 (1-47)||(43330171-43330217)
chr4 (1-47)||(49041971-49042017)
chr4 (1-47)||(51450237-51450283)
chr4 (1-38)||(14577506-14577543)
chr4 (2-47)||(24664981-24665026)
chr4 (2-47)||(48472987-48473031)
chr4 (2-46)||(6087773-6087817)
chr4 (1-37)||(20799394-20799430)
chr4 (1-37)||(21449898-21449934)
chr4 (1-37)||(34545959-34545995)
chr4 (2-38)||(36521499-36521535)
chr4 (11-47)||(44572629-44572665)
chr4 (2-38)||(44815967-44816003)
chr4 (7-39)||(52322854-52322886)
chr4 (2-38)||(52869008-52869044)
chr4 (2-38)||(54294421-54294457)
[»] chr2 (34 HSPs)
chr2 (1-47)||(20565065-20565111)
chr2 (1-47)||(23250310-23250356)
chr2 (1-46)||(660813-660858)
chr2 (2-47)||(31543038-31543083)
chr2 (3-47)||(37852037-37852081)
chr2 (1-47)||(7537135-7537180)
chr2 (1-47)||(20200730-20200776)
chr2 (1-47)||(25186232-25186278)
chr2 (1-47)||(31815877-31815923)
chr2 (1-47)||(38904086-38904132)
chr2 (1-44)||(18693655-18693698)
chr2 (4-47)||(33424315-33424358)
chr2 (2-44)||(346117-346159)
chr2 (1-47)||(3708718-3708764)
chr2 (1-47)||(11868652-11868698)
chr2 (1-47)||(12124709-12124755)
chr2 (1-47)||(20990894-20990940)
chr2 (1-47)||(21391760-21391805)
chr2 (1-35)||(24579670-24579704)
chr2 (1-47)||(29544652-29544698)
chr2 (1-35)||(32458327-32458361)
chr2 (1-47)||(35360045-35360091)
chr2 (1-47)||(44810730-44810776)
chr2 (1-38)||(11560523-11560560)
chr2 (2-47)||(27848184-27848229)
chr2 (1-38)||(34977229-34977266)
chr2 (1-38)||(42791320-42791357)
chr2 (3-47)||(8728846-8728890)
chr2 (3-47)||(10735821-10735865)
chr2 (2-30)||(12231903-12231931)
chr2 (3-47)||(15447704-15447748)
chr2 (2-46)||(16082159-16082203)
chr2 (1-37)||(25598562-25598598)
chr2 (6-38)||(26387547-26387579)
[»] chr5 (20 HSPs)
chr5 (1-47)||(15889436-15889482)
chr5 (1-47)||(27086103-27086149)
chr5 (1-43)||(38784066-38784108)
chr5 (1-46)||(5015305-5015350)
chr5 (2-47)||(39980534-39980579)
chr5 (1-47)||(8544979-8545025)
chr5 (1-43)||(13409575-13409617)
chr5 (1-47)||(13864369-13864415)
chr5 (5-47)||(14474863-14474905)
chr5 (1-35)||(20688065-20688099)
chr5 (1-47)||(22522791-22522837)
chr5 (1-47)||(37462136-37462182)
chr5 (1-47)||(40715939-40715985)
chr5 (1-47)||(41650930-41650975)
chr5 (2-47)||(17083583-17083628)
chr5 (2-47)||(20258571-20258616)
chr5 (1-38)||(22509938-22509975)
chr5 (1-46)||(32200438-32200483)
chr5 (2-47)||(37021362-37021407)
chr5 (2-34)||(36623177-36623209)
[»] chr3 (21 HSPs)
chr3 (1-38)||(16792973-16793010)
chr3 (1-46)||(34899122-34899167)
chr3 (1-46)||(39779049-39779094)
chr3 (2-47)||(40520778-40520823)
chr3 (3-47)||(8136622-8136666)
chr3 (4-47)||(552202-552245)
chr3 (1-44)||(27065725-27065768)
chr3 (4-47)||(47969979-47970022)
chr3 (1-47)||(916464-916510)
chr3 (1-47)||(7464481-7464527)
chr3 (1-47)||(25727957-25728003)
chr3 (1-47)||(38130949-38130995)
chr3 (1-47)||(41817524-41817570)
chr3 (1-47)||(44075146-44075192)
chr3 (1-47)||(46483272-46483318)
chr3 (1-47)||(48849753-48849799)
chr3 (1-47)||(51882190-51882236)
chr3 (1-34)||(977944-977977)
chr3 (1-38)||(13800692-13800729)
chr3 (1-38)||(46226024-46226061)
chr3 (1-37)||(45431973-45432009)
[»] scaffold0352 (1 HSPs)
scaffold0352 (2-37)||(12629-12664)
[»] scaffold1127 (1 HSPs)
scaffold1127 (1-39)||(1163-1201)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-47)||(5207-5253)
[»] scaffold0238 (1 HSPs)
scaffold0238 (1-39)||(25414-25452)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-35)||(72777-72811)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-38)||(239832-239869)


Alignment Details
Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 18023704 - 18023936
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccacnnnnnnnntttatattttgaaggattgggtgtaggcacaattgggaccttaga 100  Q
    |||||||||||||||||||||||||| |||||||| || ||||||||           |||||||||||||||| |||||||||||||||||||||||||    
T  18023704 caatgcataatatatgcaaggtccagggttcaaactccgaccaccacaaaaaaaaaaaatattttgaaggattgagtgtaggcacaattgggaccttaga 18023803  T
Q  101 tcaaacaaatcaatctaaaagttgagagtattacatctcgtccattagattaatacaacaatgaagnnnnnnnnagagaagcgccaaccgactcaagcca 200  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||| ||    
T  18023804 tcaaacaaatcaatctaaaggttgagagtattacatctcgcccattagattaatacaacaatgaagtttttcttagagaagcgccaaccgactcaagaca 18023903  T
Q  201 attcaagtcatctcctgtcaaatctcatcatta 233  Q
    |||||||||||||||||||||||||||| ||||    
T  18023904 attcaagtcatctcctgtcaaatctcataatta 18023936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3830093 - 3830139
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||    
T  3830093 caatgcataatatatgcaaggtccagggttcaaaccccagccaccac 3830139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3671849 - 3671895
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||    
T  3671849 caatgcataatatatgcaaggtctggagttcaaaccccgaccaccac 3671895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30857273 - 30857319
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||    
T  30857273 caatgcataatatatgcaaggttttgagttcaaaccccaaccaccac 30857319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 10242506 - 10242551
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||||||||||||| ||||||||||| | ||||||    
T  10242506 aatgcataatatatgcaaggtccagggttcaaaccccgatcaccac 10242551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20085795 - 20085750
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||    
T  20085795 caatgcataatatatgcaaggtccggggttcaaaccccaaacacca 20085750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19599170 - 19599214
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccacc 45  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||    
T  19599170 caatgcataatatatgcaaggtccggggttcaaaccccgaccacc 19599214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 47342470 - 47342427
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccac 44  Q
    |||||||||||||||||||||||| |||||||||| || |||||    
T  47342470 caatgcataatatatgcaaggtccggagttcaaactccgaccac 47342427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12167432 - 12167478
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||| |||||||| |  |||||||||||||||||||    
T  12167432 caatgcataatatattcaaggtccgggattcaaaccccaaccaccac 12167478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20763179 - 20763225
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  20763179 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 20763225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25288689 - 25288735
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| ||||||||| |||| |||||||    
T  25288689 caatgcataagatatgcaaggtccggagttcaaatcccagccaccac 25288735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27462472 - 27462426
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||    
T  27462472 caatgcataatatatgcaaggtccggggttcaaaccccggccaccac 27462426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27833437 - 27833391
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||| ||||||| | ||||||||||| ||||||||    
T  27833437 caatgcataatatatgtaaggtccggggttcaaaccccgaccaccac 27833391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28736669 - 28736623
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||| |||||||||||||||   ||||||||||||||||||||    
T  28736669 caatgcatgatatatgcaaggtccgaggttcaaaccccaaccaccac 28736623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29488745 - 29488791
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  29488745 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 29488791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33232433 - 33232387
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  33232433 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 33232387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34284575 - 34284529
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  34284575 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 34284529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6781832 - 6781869
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  6781832 caatgcataaaatatgcaaggtccagggttcaaacccc 6781869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18714473 - 18714510
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    |||||||||||||||||||||||| | |||||||||||    
T  18714473 caatgcataatatatgcaaggtccggggttcaaacccc 18714510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 21322201 - 21322246
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| |||||||||||||| |||||||||||  |||||||    
T  21322201 aatgcataatgtatgcaaggtccagggttcaaaccccggccaccac 21322246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 21554969 - 21554924
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||| |||||||||||||||||||  |||||||||| ||||||||    
T  21554969 aatgcttaatatatgcaaggtccaggattcaaaccccgaccaccac 21554924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 26717963 - 26717930
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaac 35  Q
    ||||||||||||||||||||||||| ||||||||    
T  26717963 aatgcataatatatgcaaggtccagggttcaaac 26717930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27263366 - 27263411
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    |||||||||||||||||||||| | |||||| ||||||| ||||||    
T  27263366 caatgcataatatatgcaaggttcggagttcgaaccccagccacca 27263411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38374227 - 38374190
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  38374227 caatgcatagtatatgcaaggtccagggttcaaacccc 38374190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 47155140 - 47155103
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  47155140 caatgcataatatatgcaaggtccagggttcgaacccc 47155103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 48629101 - 48629056
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    |||||||||||||||||||||||| | ||| ||||||| |||||||    
T  48629101 caatgcataatatatgcaaggtccggggtttaaaccccgaccacca 48629056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1720114 - 1720074
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaac 41  Q
    |||||||||||||||||||| ||  ||||||||||||||||    
T  1720114 caatgcataatatatgcaagctctcgagttcaaaccccaac 1720074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 10244752 - 10244788
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccc 37  Q
    |||||||||||||||||||||||| | ||||||||||    
T  10244752 caatgcataatatatgcaaggtccggggttcaaaccc 10244788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33473557 - 33473521
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccc 37  Q
    |||||||||||||||||||||||||| |||| |||||    
T  33473557 caatgcataatatatgcaaggtccagggttccaaccc 33473521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 34448646 - 34448610
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccc 37  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  34448646 caatgcataatatatgtaaggtccagggttcaaaccc 34448610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 37495953 - 37495909
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    ||||||||||||||||||||||||  ||||||| ||| |||||||    
T  37495953 aatgcataatatatgcaaggtccaaggttcaaatcccgaccacca 37495909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44243898 - 44243944
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  44243898 caatgcataatatatgtaaggtccagagttcaaaccccaaccaccac 44243944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29987148 - 29987102
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||  |||||| |||||||||||||||    
T  29987148 caatgcataatatatgcaaggtctggagttcgaaccccaaccaccac 29987102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32950797 - 32950751
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| ||||||||||| | ||||||||    
T  32950797 caatgcataatatatgcaaggtccggagttcaaacctcgaccaccac 32950751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32962588 - 32962634
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||||||    
T  32962588 caatgcataaaatatgcaaggtccagggttcaaaccccgaccaccac 32962634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45140042 - 45139996
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||    
T  45140042 caatgcataatatatgcaaggtccagagtttaaaccccggccaccac 45139996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5907824 - 5907861
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    |||||||||||||||||||||||||| |||||||||||    
T  5907824 caatgcataatatatgcaaggtccagggttcaaacccc 5907861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 48264506 - 48264462
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||    
T  48264506 aatgcataaaatatgcaaggtccagagttcaaatctcaaccacca 48264462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12269020 - 12268977
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccac 44  Q
    |||||||||||||||||||||||| | ||||||||||| |||||    
T  12269020 caatgcataatatatgcaaggtccggggttcaaaccccgaccac 12268977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8269404 - 8269358
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||| ||||||||||||||||||| | ||||||||||| ||||||||    
T  8269404 caatacataatatatgcaaggtccggggttcaaaccccgaccaccac 8269358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9929267 - 9929229
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccca 39  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  9929267 caatgcataatatatgcaaggtccagggttaaaacccca 9929229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17139553 - 17139507
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||| |||||||| | ||||||||||| ||||||||    
T  17139553 caatgcataatatattcaaggtccggggttcaaaccccgaccaccac 17139507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23405394 - 23405348
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||||| |||| || ||| ||||||||    
T  23405394 caatgcataatatatgcaaggtccagggttcgaatcccgaccaccac 23405348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27533268 - 27533314
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||| | | ||||||||||| ||||||||    
T  27533268 caatgcataatatatgcaaggttcggggttcaaaccccgaccaccac 27533314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37045182 - 37045144
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccca 39  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  37045182 caatgcataatatatgcaaggtccagggttcgaacccca 37045144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 39252182 - 39252136
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||| ||||||||||||||||||| | |||||||| |||||||||||    
T  39252182 caatacataatatatgcaaggtccggggttcaaactccaaccaccac 39252136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 39252293 - 39252247
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||| ||||||||||| ||||||||| |||||||| |||||||||||    
T  39252293 caatacataatatatgtaaggtccagggttcaaactccaaccaccac 39252247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42045408 - 42045362
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||    
T  42045408 caatgcataatatatgcaaggtctggagttcaaaccccggccaccac 42045362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42440184 - 42440138
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||| ||||||  |||||||||||| |||||||||    
T  42440184 caatgcataatatatgtaaggtctggagttcaaaccctaaccaccac 42440138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 5869790 - 5869835
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||||||| | | ||||||||||||| ||||||||    
T  5869790 aatgcataatatatgcaagattcggagttcaaaccccgaccaccac 5869835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16475949 - 16475904
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    |||| ||||||||||| ||||||||  |||||||||||||||||||    
T  16475949 caatacataatatatgtaaggtccaaggttcaaaccccaaccacca 16475904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25532998 - 25533035
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    |||||||||||||||||||||||| | |||||||||||    
T  25532998 caatgcataatatatgcaaggtccggggttcaaacccc 25533035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 46579684 - 46579640
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||||||| ||| |||||||||||||| |||||||    
T  46579684 aatgcataatatatgcaagatcc-gagttcaaaccccatccaccac 46579640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17283976 - 17284012
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccc 37  Q
    |||||||||||||||||||||||||| |||| |||||    
T  17283976 caatgcataatatatgcaaggtccagggttcgaaccc 17284012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 32497517 - 32497481
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccc 37  Q
    ||||||||||||||||||||||| || ||||||||||    
T  32497517 caatgcataatatatgcaaggtctagggttcaaaccc 32497481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 50040381 - 50040417
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccc 37  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  50040381 caatgcataaaatatgcaaggtccagggttcaaaccc 50040417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42172279 - 42172233
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  42172279 caatgcataatatatgcaagatccggagttcaaaccccaaccaccac 42172233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 29652243 - 29652288
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    |||||||||||||||||||||||||||||||||||| | |||||||    
T  29652243 caatgcataatatatgcaaggtccagagttcaaacctcgaccacca 29652288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8881300 - 8881346
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||||| |||||||||||  |||||||    
T  8881300 caatgcataatatatgcaaggtccagggttcaaaccccggccaccac 8881346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18533694 - 18533740
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||    
T  18533694 caatgcataatatatgcaagatccggggttcaaaccccaaccaccac 18533740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 8999926 - 8999881
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||| |||||| ||||||||||| ||||||||    
T  8999926 aatgcataatatatgcaaagtccagggttcaaaccccgaccaccac 8999881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11709011 - 11709056
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||    
T  11709011 caatgcataatatatgcaaggtccgaagttcaaaccccgaccacca 11709056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27718930 - 27718885
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    |||||||||||||||||||||||| |||||||||| || |||||||    
T  27718930 caatgcataatatatgcaaggtccggagttcaaactccgaccacca 27718885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8461872 - 8461829
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccac 44  Q
    |||||||||| ||||||||||||| ||||||||||||| |||||    
T  8461872 caatgcataaaatatgcaaggtccggagttcaaaccccgaccac 8461829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 44794918 - 44794953
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacc 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  44794918 caatgcataatatatgcaaggtccggagttcaaacc 44794953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 943122 - 943168
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| || ||| |||||||||||||||    
T  943122 caatgcataaaatatgcaaggtccggaattcgaaccccaaccaccac 943168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6447214 - 6447260
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| ||||||||| | || |||||||    
T  6447214 caatgcataatatatgcaaggtccggagttcaaatctcagccaccac 6447260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 8043899 - 8043941
Alignment:
Q  5 gcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||| | |||||||||| |||||||||||    
T  8043899 gcataatatatgcaaggttcggagttcaaactccaaccaccac 8043941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12748926 - 12748972
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||    
T  12748926 caatgcataatatatgcaaggtccggggttcaaaccccggccaccac 12748972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12800936 - 12800890
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||| ||||||||||||||||||| | ||||||||||| ||||||||    
T  12800936 caatacataatatatgcaaggtccggggttcaaaccccgaccaccac 12800890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19163572 - 19163526
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||| |||||||||||| | ||||||||||| ||||||||    
T  19163572 caatgcataatttatgcaaggtccggggttcaaaccccgaccaccac 19163526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20469347 - 20469301
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||| | |||||| ||||||| |||||||    
T  20469347 caatgcataatatatgcaaggttcggagttcgaaccccagccaccac 20469301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20665399 - 20665353
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  20665399 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 20665353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26932799 - 26932753
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||| ||||||||||||||||| ||||||||| | ||||||||    
T  26932799 caatgcatgatatatgcaaggtccagggttcaaaccacgaccaccac 26932753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29376926 - 29376972
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||| ||||||||||||||||  ||||||||||||| ||||||||    
T  29376926 caatgcgtaatatatgcaaggtctggagttcaaaccccgaccaccac 29376972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29499796 - 29499842
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||||| |||| |||||||| ||||||    
T  29499796 caatgcataaaatatgcaaggtccagggttcgaaccccaaacaccac 29499842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30550762 - 30550716
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  30550762 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 30550716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32051568 - 32051522
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||    
T  32051568 caatgcataatatatgcaaggtccggggttcaaaccccggccaccac 32051522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33105416 - 33105454
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccca 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  33105416 caatgcataatatatgcaaggtccggggttcaaacccca 33105454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44215511 - 44215465
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  44215511 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 44215465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 29908036 - 29908065
Alignment:
Q  1 caatgcataatatatgcaaggtccagagtt 30  Q
    ||||||||||||||||||||||||||||||    
T  29908036 caatgcataatatatgcaaggtccagagtt 29908065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 31336843 - 31336806
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    ||||||||||||||||||||||| || |||||||||||    
T  31336843 caatgcataatatatgcaaggtctagggttcaaacccc 31336806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 35198573 - 35198536
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  35198573 caatgcataatatatgcaaggttcagagttcgaacccc 35198536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 41625220 - 41625264
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    ||||||||||||||| |||||| || |||| ||||||||||||||    
T  41625220 aatgcataatatatgtaaggtctagggttcgaaccccaaccacca 41625264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18253375 - 18253329
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||    
T  18253375 caatgcataatatatgcaaggtccagggttcaaaccccatccaccac 18253329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32524456 - 32524411
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||    
T  32524456 caatgcataatatatgcaaagtccagggttcaaaccccaaccacca 32524411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 788891 - 788937
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||| | ||||||||||||| ||||||||    
T  788891 caatgcataatatatgcaaggttcggagttcaaaccccgaccaccac 788937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13496141 - 13496183
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaacca 43  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  13496141 caatgcataatatatgcaaggtccggagttcaaaccccgacca 13496183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 247684 - 247730
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  247684 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 247730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7083028 - 7082982
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||| ||  |||||||||||||| |||||||    
T  7083028 caatgcataatatatgcaagatctggagttcaaaccccagccaccac 7082982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8569734 - 8569780
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||    
T  8569734 caatgcataatatatgcaaggtccggggttcaaaccccggccaccac 8569780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12333604 - 12333562
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaacca 43  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||    
T  12333604 caatgcataaaatatgcaaggtccagagtttaaaccccgacca 12333562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15187088 - 15187134
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||||||||||||   ||||||||||| ||||||||    
T  15187088 caatgcataatatatgcaaggtccgaggttcaaaccccgaccaccac 15187134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15473518 - 15473472
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||||||||||||   ||||||||||| ||||||||    
T  15473518 caatgcataatatatgcaaggtccgaggttcaaaccccgaccaccac 15473472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24373746 - 24373700
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||  | |||||||||||| |||||||    
T  24373746 caatgcataatatatgcaaggtcaggggttcaaaccccagccaccac 24373700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26489984 - 26489938
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||| |||| |||||||| |||||| ||||||||||||||||||||    
T  26489984 caatgtataaaatatgcaaagtccagggttcaaaccccaaccaccac 26489938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28898881 - 28898918
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  28898881 caatgcataatatatgaaaggtccggagttcaaacccc 28898918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 33542843 - 33542798
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    |||||||||||||||||||||| || ||||||||| || |||||||    
T  33542843 caatgcataatatatgcaaggttcatagttcaaactccgaccacca 33542798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23775543 - 23775589
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||    
T  23775543 caatgcataatatatgcaaggtccagggttcgaaccccaaccaccac 23775589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31760271 - 31760317
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  31760271 caatgtataatatatgcaaggtccagagttcaaactccaaccaccac 31760317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 18094432 - 18094476
Alignment:
Q  3 atgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| |||||||||| |||||||||    
T  18094432 atgcataatatatgcaaggtccagggttcaaaccctaaccaccac 18094476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 48694683 - 48694648
Alignment:
Q  4 tgcataatatatgcaaggtccagagttcaaacccca 39  Q
    ||||||||||||||||||||||||||||||||||||    
T  48694683 tgcataatatatgcaaggtccagagttcaaacccca 48694648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11949799 - 11949753
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||    
T  11949799 caatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 11949753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20383513 - 20383559
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | |||||||||||| |||||||    
T  20383513 caatgcataatatatgcaaggtccggggttcaaaccccatccaccac 20383559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21318289 - 21318243
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||||    
T  21318289 caatgcataatatatgcaaggtctagggttcaaaccccgaccaccac 21318243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24079876 - 24079830
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  24079876 caatgcataaaatatgcaaggtccggagttcaaaccccgaccaccac 24079830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38453290 - 38453336
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||||| |||| ||||||| |||||||    
T  38453290 caatgcataatatatgcaaggtccagggttcgaaccccagccaccac 38453336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19479513 - 19479468
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||    
T  19479513 caatgcataatatatgcaaggtccggggttcaaaccccgaccacca 19479468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 10148204 - 10148239
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacc 36  Q
    |||||||||||||||||||||| |||||||||||||    
T  10148204 caatgcataatatatgcaaggttcagagttcaaacc 10148239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 29908081 - 29908116
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacc 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  29908081 caatgcataatatatgcaaggtccggagttcaaacc 29908116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 50362175 - 50362140
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacc 36  Q
    |||||||||||||||||||||||||| |||||||||    
T  50362175 caatgcataatatatgcaaggtccagggttcaaacc 50362140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 675943 - 675981
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccca 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  675943 caatgcataatatatgcaaggtccggggttcaaacccca 675981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2649769 - 2649723
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| |||||| ||||| | |||||||    
T  2649769 caatgcataatatatgcaaggtccggagttcgaaccctagccaccac 2649723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9946452 - 9946498
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| | ||||||||||| ||||||||    
T  9946452 caatgcataaaatatgcaaggtccggggttcaaaccccgaccaccac 9946498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10261805 - 10261759
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  10261805 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 10261759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16470329 - 16470375
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||||| |||| |||||| ||||||||    
T  16470329 caatgcataaaatatgcaaggtccagggttcgaaccccgaccaccac 16470375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17423213 - 17423167
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | |||||||| ||| |||||||    
T  17423213 caatgcataatatatgcaaggtccggggttcaaactccagccaccac 17423167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19588179 - 19588225
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||||| |||||||||||  |||||||    
T  19588179 caatgcataaaatatgcaaggtccagggttcaaaccccggccaccac 19588225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21114341 - 21114295
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||| ||||||||||||||| | ||||||||||| ||||||||    
T  21114341 caatgcatgatatatgcaaggtccggggttcaaaccccgaccaccac 21114295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21317374 - 21317328
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||  | ||||||||| ||||||||||    
T  21317374 caatgcataatatatgcaaggtcaggggttcaaacctcaaccaccac 21317328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21562650 - 21562696
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  21562650 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 21562696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26926746 - 26926700
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  26926746 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 26926700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28435284 - 28435238
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||| | | |||||||||||| |||||||    
T  28435284 caatgcataatatatgcaaggttcggggttcaaaccccagccaccac 28435238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30850420 - 30850374
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||| ||| ||||||||||| ||| ||||    
T  30850420 caatgcataatatatgcaaggttcagggttcaaaccccgacctccac 30850374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31780770 - 31780815
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| |||||||||||||| | |||||||||||||||||||    
T  31780770 caatgcataaaatatgcaaggtcca-aattcaaaccccaaccaccac 31780815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33495590 - 33495636
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||| ||||||||||||||| | ||| ||||||||||||||||||||    
T  33495590 caatacataatatatgcaagattcagggttcaaaccccaaccaccac 33495636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38374982 - 38375028
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||    
T  38374982 caatgcataatatatgcaaggtctggagttcaaaccccggccaccac 38375028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 40071004 - 40070962
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaacca 43  Q
    ||||||||||||||||||||||||  |||||||||||| ||||    
T  40071004 caatgcataatatatgcaaggtccgaagttcaaaccccgacca 40070962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43330171 - 43330217
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  43330171 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 43330217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 49042017 - 49041971
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||    
T  49042017 caatgcataatatatgcaaggtccggggttcaaaccccggccaccac 49041971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 51450237 - 51450283
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  51450237 caatgcataagatatgcaaggtccggagttcaaaccccggccaccac 51450283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14577543 - 14577506
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  14577543 caatgcataatatatgcaaagtccggagttcaaacccc 14577506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 24665026 - 24664981
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||||||||||| | |||| |||||| ||||||||    
T  24665026 aatgcataatatatgcaaggtccggggttcgaaccccgaccaccac 24664981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 48472987 - 48473031
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||| |||||||||| | ||||||||||||||||||||    
T  48472987 aatgcataatatttgcaaggtcc-gtgttcaaaccccaaccaccac 48473031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 6087773 - 6087817
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    ||||||||||||||||||||||  | |||||||||||| ||||||    
T  6087773 aatgcataatatatgcaaggtctggggttcaaaccccagccacca 6087817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 20799430 - 20799394
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccc 37  Q
    |||||||||||||||||||||||| | ||||||||||    
T  20799430 caatgcataatatatgcaaggtccggggttcaaaccc 20799394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21449934 - 21449898
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccc 37  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  21449934 caatgcatgatatatgcaaggtccagggttcaaaccc 21449898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 34545959 - 34545995
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccc 37  Q
    |||||||||||||||||||||||||||| || |||||    
T  34545959 caatgcataatatatgcaaggtccagagatcgaaccc 34545995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 36521499 - 36521535
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  36521499 aatgcataatatatgtaaggttcagagttcaaacccc 36521535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 44572629 - 44572665
Alignment:
Q  11 tatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  44572629 tatatgcaaggttcagagttcaaaccccgaccaccac 44572665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 44815967 - 44816003
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    ||||||||||||||||||||||| | |||||||||||    
T  44815967 aatgcataatatatgcaaggtccggggttcaaacccc 44816003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 52322886 - 52322854
Alignment:
Q  7 ataatatatgcaaggtccagagttcaaacccca 39  Q
    ||||||||||||||||||||||||| |||||||    
T  52322886 ataatatatgcaaggtccagagttcgaacccca 52322854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 52869044 - 52869008
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    |||||||||||||| |||||||| |||||||||||||    
T  52869044 aatgcataatatatacaaggtccggagttcaaacccc 52869008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 54294457 - 54294421
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    ||||||||||||||||||||||| | |||||||||||    
T  54294457 aatgcataatatatgcaaggtccggggttcaaacccc 54294421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20565111 - 20565065
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||    
T  20565111 caatgcataatatatgcaaggtccggggttcaaaccccaaccaccac 20565065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23250356 - 23250310
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  23250356 caatgcataatatatgcaaggtccagggttcaaaccccgaccaccac 23250310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 660858 - 660813
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||    
T  660858 caatgcataatatatgcaaggtccagggttcaaaccccgaccacca 660813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 31543038 - 31543083
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||    
T  31543038 aatgcataatatatgcaaggtccggggttcaaaccccaaccaccac 31543083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 37852037 - 37852081
Alignment:
Q  3 atgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| |||||||||| |||||||||    
T  37852037 atgcataatatatgcaaggtccagggttcaaaccctaaccaccac 37852081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7537135 - 7537180
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||    
T  7537135 caatgcataatatatgcaaggtccggagttc-aaccccaaccaccac 7537180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20200730 - 20200776
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||||| |||||||||||  |||||||    
T  20200730 caatgcataatatatgcaaggtccagggttcaaaccccggccaccac 20200776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25186278 - 25186232
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | |||||||||||| |||||||    
T  25186278 caatgcataatatatgcaaggtccggggttcaaaccccagccaccac 25186232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31815923 - 31815877
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||    
T  31815923 caatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 31815877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38904086 - 38904132
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||||    
T  38904086 caatgcataatatatgcaaggttcagggttcaaaccctaaccaccac 38904132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18693698 - 18693655
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccac 44  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||    
T  18693698 caatgcataatatatgcaagatccagggttcaaaccccgaccac 18693655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 33424358 - 33424315
Alignment:
Q  4 tgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||||| | | ||||||||||||||||||||||    
T  33424358 tgcataatatatgcaagattcggagttcaaaccccaaccaccac 33424315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 346159 - 346117
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccac 44  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||    
T  346159 aatgcataatatatgtaaggtccagggttcaaaccccgaccac 346117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3708718 - 3708764
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  3708718 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 3708764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11868698 - 11868652
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  11868698 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 11868652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12124709 - 12124755
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| |||||| |||| ||| ||||||    
T  12124709 caatgcataatatatgcaaggtccggagttcgaacctcaaacaccac 12124755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20990940 - 20990894
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||| ||| ||||||||||| ||||||||    
T  20990940 caatgcataaaatatgcaaggttcagggttcaaaccccgaccaccac 20990894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21391760 - 21391805
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||| ||||||||||||||||| ||||||||| |||||||||    
T  21391760 caatgcatactatatgcaaggtccaga-ttcaaaccctaaccaccac 21391805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 24579704 - 24579670
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaac 35  Q
    |||||||||||||||||||||||||| ||||||||    
T  24579704 caatgcataatatatgcaaggtccagggttcaaac 24579670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29544652 - 29544698
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||    
T  29544652 caatgcataatatatgcaaggtccggggttcaaaccccggccaccac 29544698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 32458327 - 32458361
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaac 35  Q
    |||||||||||||||||||||||||| ||||||||    
T  32458327 caatgcataatatatgcaaggtccagggttcaaac 32458361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35360091 - 35360045
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  35360091 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 35360045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44810730 - 44810776
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||| ||||||||||||||||||| | |||||||||||| |||||||    
T  44810730 caatacataatatatgcaaggtccggggttcaaaccccagccaccac 44810776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 11560523 - 11560560
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  11560523 caatgcataatatatgcaaggttcagggttcaaacccc 11560560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 27848184 - 27848229
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||||||||||| | |||||||||||  |||||||    
T  27848184 aatgcataatatatgcaaggtccggggttcaaaccccggccaccac 27848229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 34977229 - 34977266
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  34977229 caatgcataatatatgcaaggtccggagtttaaacccc 34977266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42791320 - 42791357
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    |||||||||||||||||||||||| | |||||||||||    
T  42791320 caatgcataatatatgcaaggtccggggttcaaacccc 42791357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 8728846 - 8728890
Alignment:
Q  3 atgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||| ||||||||| ||||| ||||||||||| ||||||||    
T  8728846 atgcataaaatatgcaagatccagggttcaaaccccgaccaccac 8728890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 10735865 - 10735821
Alignment:
Q  3 atgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||| | |||||||||||  |||||||    
T  10735865 atgcataatatatgcaaggtccggggttcaaaccccggccaccac 10735821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 30
Target Start/End: Original strand, 12231903 - 12231931
Alignment:
Q  2 aatgcataatatatgcaaggtccagagtt 30  Q
    |||||||||||||||||||||||||||||    
T  12231903 aatgcataatatatgcaaggtccagagtt 12231931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 15447748 - 15447704
Alignment:
Q  3 atgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||  |||||||||||||  |||||||    
T  15447748 atgcataatatatgcaaggtctggagttcaaaccccggccaccac 15447704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 16082159 - 16082203
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    |||||||||||||||||||||||| ||||||| | || |||||||    
T  16082159 aatgcataatatatgcaaggtccaaagttcaacctccgaccacca 16082203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25598598 - 25598562
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccc 37  Q
    |||||||||||||||||||||||||| |||| |||||    
T  25598598 caatgcataatatatgcaaggtccagggttcgaaccc 25598562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 26387579 - 26387547
Alignment:
Q  6 cataatatatgcaaggtccagagttcaaacccc 38  Q
    ||||||||||||||||||| |||||||||||||    
T  26387579 cataatatatgcaaggtccggagttcaaacccc 26387547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.00000000008; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15889436 - 15889482
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||||    
T  15889436 caatgcataatatatgcaaggtctagggttcaaaccccgaccaccac 15889482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27086103 - 27086149
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||| |||||||||||||||||||| |||||||||||| |||||||    
T  27086103 caatgtataatatatgcaaggtccagggttcaaaccccagccaccac 27086149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38784108 - 38784066
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaacca 43  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  38784108 caatgcataatatatgcaaagtccaaagttcaaaccccaacca 38784066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5015305 - 5015350
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||    
T  5015305 caatgaataatatatgcaaggttcggagttcaaaccccaaccacca 5015350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 39980534 - 39980579
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  39980534 aatgcataaaatatgcaaggtccggagttcaaaccccgaccaccac 39980579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8545025 - 8544979
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| |||||| ||| || ||||||||    
T  8545025 caatgcataatatatgcaaggtccggagttcgaactccgaccaccac 8544979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13409575 - 13409617
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaacca 43  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||    
T  13409575 caatgcataatatatacaaggtccggagttcaaaccccgacca 13409617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13864369 - 13864415
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||| ||||||||||||||||||| | ||||||||||| ||||||||    
T  13864369 caatacataatatatgcaaggtccggggttcaaaccccgaccaccac 13864415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 14474863 - 14474905
Alignment:
Q  5 gcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||| |||||||||||  |||||||    
T  14474863 gcataatatatgcaaggtccagggttcaaaccccggccaccac 14474905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 20688065 - 20688099
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaac 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  20688065 caatgcataatatatgcaaggtccggagttcaaac 20688099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22522837 - 22522791
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||    
T  22522837 caatgcataatatatgcaaggtccggggttcaaaccccggccaccac 22522791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37462136 - 37462182
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  37462136 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 37462182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40715985 - 40715939
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||    
T  40715985 caatgcataatatatgcaaggtccggggttcaaaccccggccaccac 40715939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41650975 - 41650930
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| |||||||||| || ||||||||    
T  41650975 caatgcataatatatgcaaggtcc-gagttcaaacaccgaccaccac 41650930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 17083628 - 17083583
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||| ||||||  |||||||||||||| |||||||    
T  17083628 aatgcataatatatgtaaggtctggagttcaaaccccagccaccac 17083583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 20258571 - 20258616
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||||||||| |||  ||| |||||||||||||||    
T  20258571 aatgcataatatatgcaaggtgcaggattcgaaccccaaccaccac 20258616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22509975 - 22509938
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    |||||||||||||||||||| | |||||||||||||||    
T  22509975 caatgcataatatatgcaagcttcagagttcaaacccc 22509938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32200483 - 32200438
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    |||||||||||||||||||||||| | |||||| |||| |||||||    
T  32200483 caatgcataatatatgcaaggtccggggttcaagccccgaccacca 32200438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 37021407 - 37021362
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||||||| | ||| ||||||||||| ||||||||    
T  37021407 aatgcataatatatgcaagattcagggttcaaaccccgaccaccac 37021362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 36623209 - 36623177
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaa 34  Q
    |||||||||||||||||||||| ||||||||||    
T  36623209 aatgcataatatatgcaaggtctagagttcaaa 36623177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 16793010 - 16792973
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    |||||||||||||||||||||||||| |||||||||||    
T  16793010 caatgcataatatatgcaaggtccagggttcaaacccc 16792973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34899122 - 34899167
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||    
T  34899122 caatgcataatatatgcaaggtccggggttcaaaccccgaccacca 34899167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 39779049 - 39779094
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccacca 46  Q
    |||||||||||||||||||||| | | |||||||||||||||||||    
T  39779049 caatgcataatatatgcaaggttcggggttcaaaccccaaccacca 39779094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 40520778 - 40520823
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||||    
T  40520778 aatgcataaaatatgcaaggtccaaagttcaaaccccgaccaccac 40520823  T

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Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 8136666 - 8136622
Alignment:
Q  3 atgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||    
T  8136666 atgcataatatatgcaaggtccaaggttcaaaccccgaccaccac 8136622  T

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Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 552202 - 552245
Alignment:
Q  4 tgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||    
T  552202 tgcataatatatgcaaggtccagggttcaaaccccgacctccac 552245  T

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Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27065768 - 27065725
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccac 44  Q
    |||||||||| ||||||||||||||| |||||||||||| ||||    
T  27065768 caatgcataaaatatgcaaggtccagggttcaaaccccagccac 27065725  T

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Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 47970022 - 47969979
Alignment:
Q  4 tgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||    
T  47970022 tgcataatatatgtaaggtccagtgttcaaacccaaaccaccac 47969979  T

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Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 916464 - 916510
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  916464 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 916510  T

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Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7464527 - 7464481
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||| ||||||| | ||||||||||| ||||||||    
T  7464527 caatgcataatatatgtaaggtccggggttcaaaccccgaccaccac 7464481  T

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Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25728003 - 25727957
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | ||||||| ||| ||||||||    
T  25728003 caatgcataatatatgcaaggtccggggttcaaatcccgaccaccac 25727957  T

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Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38130995 - 38130949
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||    
T  38130995 caatgcataatatatgcaaggtccggggttcaaaccccggccaccac 38130949  T

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Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41817524 - 41817570
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | |||||||||| | |||||||    
T  41817524 caatgcataatatatgcaaggtccggggttcaaaccctagccaccac 41817570  T

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Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44075192 - 44075146
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||| ||||||||||||| |||||||||||||  |||||||    
T  44075192 caatgcataaaatatgcaaggtccggagttcaaaccccggccaccac 44075146  T

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Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 46483272 - 46483318
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    ||||||||||||||||||| |||| |||||| ||||||| |||||||    
T  46483272 caatgcataatatatgcaaagtccggagttcgaaccccagccaccac 46483318  T

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Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 48849799 - 48849753
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||    
T  48849799 caatgcataatatatgcaaggtccggggttcaaaccccggccaccac 48849753  T

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Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 51882236 - 51882190
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||| ||||| |||||||||||  |||||||    
T  51882236 caatgcataatatatgcaagatccagggttcaaaccccggccaccac 51882190  T

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Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 977977 - 977944
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  977977 caatgcataatatatgcaaggtccggagttcaaa 977944  T

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Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 13800692 - 13800729
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  13800692 caatgcataatatatgcaaggtccacagttcgaacccc 13800729  T

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Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 46226061 - 46226024
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  46226061 caatgcataatatatgcaaggtccggagttcgaacccc 46226024  T

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Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 45431973 - 45432009
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccc 37  Q
    |||||||||||||||||||||||| | ||||||||||    
T  45431973 caatgcataatatatgcaaggtccggggttcaaaccc 45432009  T

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Target: scaffold0352 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 12664 - 12629
Alignment:
Q  2 aatgcataatatatgcaaggtccagagttcaaaccc 37  Q
    ||||||||| ||||||||||||||||||||||||||    
T  12664 aatgcataaaatatgcaaggtccagagttcaaaccc 12629  T

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Target: scaffold1127 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1127
Description:

Target: scaffold1127; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1201 - 1163
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccca 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  1201 caatgcataatatatgcaaggtccggggttcaaacccca 1163  T

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Target: scaffold0334 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5207 - 5253
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaaccccaaccaccac 47  Q
    |||||||||||||||||||||||    ||||||||||||||||||||    
T  5207 caatgcataatatatgcaaggtctgaggttcaaaccccaaccaccac 5253  T

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Target: scaffold0238 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 25414 - 25452
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccca 39  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  25414 caatgcataatatatgcaaggtccagggttcgaacccca 25452  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 72811 - 72777
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaac 35  Q
    |||||||||||||||||||||||||| ||||||||    
T  72811 caatgcataatatatgcaaggtccagggttcaaac 72777  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 239832 - 239869
Alignment:
Q  1 caatgcataatatatgcaaggtccagagttcaaacccc 38  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  239832 caatgcataatatatgcaaagtccggagttcaaacccc 239869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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