View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7694_high_10 (Length: 296)
Name: NF7694_high_10
Description: NF7694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7694_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 6291375 - 6291510
Alignment:
| Q |
1 |
aattcaaacaagaaaagaaaggaattctaatcctttcaacaatacctctatatctatatctatatattcccttccattttggtatcctagaatcttttgt |
100 |
Q |
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| T |
6291375 |
aattcaaacaagaaaagaaaggaattctaatcctttcaacaatacctctatatctatatctatatattcccttccattttggtatcctagaatcttttct |
6291474 |
T |
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| Q |
101 |
cttccttcctcacaatgacaatattcatcacaacaa |
136 |
Q |
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| T |
6291475 |
cttccttcctcacaatgacaatattcatcacaacaa |
6291510 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 6291574 - 6291653
Alignment:
| Q |
200 |
ccttaaatttttaactctaagaattactataacttgtacaatatttagtactaattcattgattaatttgaaattatata |
279 |
Q |
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| T |
6291574 |
ccttaaatttttaactctaagaattactataacttgtacaatatttagtactaattcattgattaatttgaaattatata |
6291653 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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