View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7694_low_7 (Length: 372)
Name: NF7694_low_7
Description: NF7694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7694_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 334; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 16 - 353
Target Start/End: Original strand, 32158269 - 32158606
Alignment:
| Q |
16 |
acctgtgtaataacattagcattattaactatatttcatcaacaataactaagttcagattcaaacaaaataaactcaccacatagtatttcactggttt |
115 |
Q |
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| T |
32158269 |
acctgtgtaataacattagcattattaactatatttcatcaacaataactaagttcagattcaaacaaaataaactcaccacatagtatttcactggttt |
32158368 |
T |
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| Q |
116 |
ctctgacattggcatattatatgaacaggtgttagttagtgctatataaaatggaatgtcaaactcaaagtttttatttcataatatgaacacaacctac |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
32158369 |
ctctgacattggcatattatatgaacaggtgttagttagtgctatataaaatggaatgtcaaactcaaagttgttatttcataatatgaacacaacctac |
32158468 |
T |
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| Q |
216 |
tccaacatgttccaaagtatatacagacactgatgtagtaatgtttgtcttgtatgattttaaaaagattctttatgtttcctcgtggccagtttggcaa |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32158469 |
tccaacatgttccaaagtatatacagacactgatgtagtaatgtttgtcttgtatgattttaaaaagattctttatgtttcctcgtggccagtttggcaa |
32158568 |
T |
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| Q |
316 |
taacattgccggtagttttggacatgggcacacattct |
353 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
32158569 |
taacattgccggtagttttggacatgggcacacattct |
32158606 |
T |
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