View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7696_high_2 (Length: 445)
Name: NF7696_high_2
Description: NF7696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7696_high_2 |
 | |
|
| [»] scaffold0090 (1 HSPs) |
| | |
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Alignment Details
Target: chr3 (Bit Score: 318; Significance: 1e-179; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 24 - 429
Target Start/End: Complemental strand, 5483588 - 5483183
Alignment:
| Q |
24 |
attggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaac |
123 |
Q |
| |
|
|||||| ||||||| ||||||||||||| || |||||||| |||||| ||||||| ||||| ||||||||| |||||||||||||||||||| | || || |
|
|
| T |
5483588 |
attggactaagcgcttggaaattattgacgggattgctcgggggctgctgtatctccatcaggattctacattaagaatcatacatagagatctcaagac |
5483489 |
T |
|
| Q |
124 |
aagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagccgaggctaatacaaataga |
223 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5483488 |
aagcaatattcttcttgatgttgatatgatcccaaagatatcagattttggtttagccagatcatttatgggagacgaagccgaggctaatacaaataga |
5483389 |
T |
|
| Q |
224 |
gtgatgggaacatagtaatatctaacctacatttatttcaatataaggcttaattttcattggttttagtctttgataataatttttcatattggagcat |
323 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
5483388 |
gtgatgggaacatagtaatatctaacctatatttaattcgatataaggcttaattttcattggttttagtctttgataataatttttcatattggagtat |
5483289 |
T |
|
| Q |
324 |
tagtccatagaatatagactatacatggactatgcccaatatcaataaatattccaagcaatgtgttctatgctttaggcattattaccgataagaattt |
423 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5483288 |
tagtccatagaatatagactatacatagactatgtccaatatcaacaaatattccaagcaatgtgttctatgctttaggcattattaccgataagaattt |
5483189 |
T |
|
| Q |
424 |
tattta |
429 |
Q |
| |
|
|||||| |
|
|
| T |
5483188 |
tattta |
5483183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 265
Target Start/End: Complemental strand, 5501893 - 5501644
Alignment:
| Q |
16 |
attgctaaattggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagat |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5501893 |
attgctaaattggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagat |
5501794 |
T |
|
| Q |
116 |
atgaaaacaagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagccgaggctaata |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
5501793 |
atgaaaacaagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagcagaggctaata |
5501694 |
T |
|
| Q |
216 |
caaatagagtgatgggaacatagtaatatctaacctacatttatttcaat |
265 |
Q |
| |
|
|||||||| |||| ||| |||||||||||||||| || |||||||||||| |
|
|
| T |
5501693 |
caaatagattgatcggatcatagtaatatctaacttatatttatttcaat |
5501644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 16 - 263
Target Start/End: Complemental strand, 5489046 - 5488799
Alignment:
| Q |
16 |
attgctaaattggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagat |
115 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5489046 |
attgctaaattggattaagcgtctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagat |
5488947 |
T |
|
| Q |
116 |
atgaaaacaagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagccgaggctaata |
215 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
5488946 |
atgaaaacaagcaatattcttcttgatgttgatatgatcccaaagatagcagactttggtttagccagatcatttatgggagacgaagcagaggctaata |
5488847 |
T |
|
| Q |
216 |
caaatagagtgatgggaacatagtaatatctaacctacatttatttca |
263 |
Q |
| |
|
|||||||| |||| ||| |||||||||||||||| |||||| |||||| |
|
|
| T |
5488846 |
caaatagattgatcggatcatagtaatatctaacttacattgatttca |
5488799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 20 - 276
Target Start/End: Complemental strand, 5524753 - 5524498
Alignment:
| Q |
20 |
ctaaattggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatga |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| | | |
|
|
| T |
5524753 |
ctaaattggaataagcgcctggaaattattaatggaattgctcgagggctgctatatcttcatcaagattctacacaaagaatcatacatagagatctca |
5524654 |
T |
|
| Q |
120 |
aaacaagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagccgaggctaatacaaa |
219 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5524653 |
agacaagcaatattcttcttgatattgatatgatcccaaagatatcagattttggtttagccagatcatttatgggagacgaagccgaggctaatacaaa |
5524554 |
T |
|
| Q |
220 |
tagagtgatgggaacatagtaatatctaacctacatttatttcaatataaggcttaa |
276 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||| ||||| ||| |||||||||| |
|
|
| T |
5524553 |
tagagtgatgggatcatagtaatatctaacttacatatattt-aatttaaggcttaa |
5524498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 32 - 242
Target Start/End: Original strand, 5855258 - 5855468
Alignment:
| Q |
32 |
aagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaata |
131 |
Q |
| |
|
|||||| |||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||| | || |||||||||| |
|
|
| T |
5855258 |
aagcgcttggaaattattgatgggattgctcgtgggctgttgtatctgcatcaagattctacactaagaataatacatagagatctcaagacaagcaata |
5855357 |
T |
|
| Q |
132 |
ttcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagccgaggctaatacaaatagagtgatggg |
231 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||| |
|
|
| T |
5855358 |
ttcttcttgatattgatatgatcccaaagatatcagattttggtttagccagatcatttatgggagaccaagctgaggcgaatacaaatagagtgatggg |
5855457 |
T |
|
| Q |
232 |
aacatagtaat |
242 |
Q |
| |
|
||||||||||| |
|
|
| T |
5855458 |
aacatagtaat |
5855468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 39 - 241
Target Start/End: Complemental strand, 20342563 - 20342361
Alignment:
| Q |
39 |
tggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaatattcttct |
138 |
Q |
| |
|
||||||||||| |||| |||||||| ||||| ||||||| |||||||||||||||||| ||||||||||||||||| | || |||||||| |||||||| |
|
|
| T |
20342563 |
tggaaattattaatggtattgctcgggggcttctgtatctccatcaagattctacactacgaatcatacatagagatctcaagacaagcaacattcttct |
20342464 |
T |
|
| Q |
139 |
tgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagccgaggctaatacaaatagagtgatgggaacatag |
238 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
20342463 |
tgatattgatatgatcccaaagatatcagattttggtttagccagatcatttatgggagaccaagccgaggctaatacaaatagagtgatgggaacctag |
20342364 |
T |
|
| Q |
239 |
taa |
241 |
Q |
| |
|
||| |
|
|
| T |
20342363 |
taa |
20342361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 32 - 243
Target Start/End: Original strand, 5803679 - 5803890
Alignment:
| Q |
32 |
aagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaata |
131 |
Q |
| |
|
|||||| |||||||||||||||| ||| |||| |||||| | ||||| ||||| |||||||||||||||||||||||||||||| | || |||||||||| |
|
|
| T |
5803679 |
aagcgcttggaaattattgatgggatttctcgggggctgctatatctgcatcaggattctacactaagaatcatacatagagatctcaagacaagcaata |
5803778 |
T |
|
| Q |
132 |
ttcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagccgaggctaatacaaatagagtgatggg |
231 |
Q |
| |
|
| |||||||||||||||||||| ||||||||| | |||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
5803779 |
tacttcttgatattgatatgatcccaaagatatccgattttggattagccagatcatttatgggagaccaagcggaggctaatacaaatagagtgatggg |
5803878 |
T |
|
| Q |
232 |
aacatagtaata |
243 |
Q |
| |
|
|||||||||||| |
|
|
| T |
5803879 |
aacatagtaata |
5803890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 24 - 242
Target Start/End: Complemental strand, 5453842 - 5453624
Alignment:
| Q |
24 |
attggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaac |
123 |
Q |
| |
|
|||||| |||||| ||||||||||||| || |||||||| |||||||||||||| ||||| ||||||||| |||||||||| ||||||||| | || || |
|
|
| T |
5453842 |
attggactaagcgtttggaaattattgacggtattgctcgggggctgttgtatctccatcaggattctacattaagaatcattcatagagatctcaagac |
5453743 |
T |
|
| Q |
124 |
aagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagccgaggctaatacaaataga |
223 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
5453742 |
aagcaatattcttcttgatattcatatgatcccaaagatatccgattttggtttagccagatcatttatgggagaccaagctgaggctaatacaaataga |
5453643 |
T |
|
| Q |
224 |
gtgatgggaacatagtaat |
242 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
5453642 |
gtgatgggaacttagtaat |
5453624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 24 - 242
Target Start/End: Original strand, 5829354 - 5829572
Alignment:
| Q |
24 |
attggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaac |
123 |
Q |
| |
|
|||||| ||||||| |||||||||||||||| |||||||| |||||| | ||||| ||||||||||| ||| | || ||||||||||||||| | || || |
|
|
| T |
5829354 |
attggactaagcgcttggaaattattgatggtattgctcgtgggctgctttatctccatcaagattcaacattgaggatcatacatagagatctcaagac |
5829453 |
T |
|
| Q |
124 |
aagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagccgaggctaatacaaataga |
223 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||||| | |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
5829454 |
aagcaatatacttcttgatattgatatgatcccaaagatatcggattttggcttagccagatcatttatgggagaccaagccgaggctaatacaaataga |
5829553 |
T |
|
| Q |
224 |
gtgatgggaacatagtaat |
242 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
5829554 |
gtgatgggaacatagtaat |
5829572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 24 - 242
Target Start/End: Complemental strand, 5445259 - 5445041
Alignment:
| Q |
24 |
attggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaac |
123 |
Q |
| |
|
|||||| |||||| |||||||||||||||| |||||||| |||||| ||||||| ||||| ||||||||| |||||||||| ||||||||| | || || |
|
|
| T |
5445259 |
attggactaagcgtttggaaattattgatggtattgctcgggggctgctgtatctccatcaggattctacattaagaatcattcatagagatctcaagac |
5445160 |
T |
|
| Q |
124 |
aagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagccgaggctaatacaaataga |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| | ||||| ||||||| ||||||||| || ||||| |||| |||||||||||||||||| |
|
|
| T |
5445159 |
aagcaatattcttcttgatattgatatgatcccaaagatatccgatttcggtttagtcagatcattcattggagagcaagctgaggctaatacaaataga |
5445060 |
T |
|
| Q |
224 |
gtgatgggaacatagtaat |
242 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
5445059 |
gtgatgggaacatagtaat |
5445041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 32 - 242
Target Start/End: Original strand, 5850107 - 5850317
Alignment:
| Q |
32 |
aagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaata |
131 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||| ||||||| ||||| ||||||||| |||||||||||||||||||| | || || ||||||| |
|
|
| T |
5850107 |
aagcgcttggaaattattgatgggattgctcgagggctgctgtatctccatcaggattctacattaagaatcatacatagagatctcaagaccagcaata |
5850206 |
T |
|
| Q |
132 |
ttcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagccgaggctaatacaaatagagtgatggg |
231 |
Q |
| |
|
| |||||||||||||||||||| || |||||| | |||||||| |||||||||||||||| ||||||| |||| |||||||| ||||||||||| ||||| |
|
|
| T |
5850207 |
tacttcttgatattgatatgatccctaagatatccgattttggattagccagatcatttacgggagaccaagctgaggctaagacaaatagagtcatggg |
5850306 |
T |
|
| Q |
232 |
aacatagtaat |
242 |
Q |
| |
|
||||||||||| |
|
|
| T |
5850307 |
aacatagtaat |
5850317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 283 - 429
Target Start/End: Complemental strand, 5488721 - 5488575
Alignment:
| Q |
283 |
ttggttttagtctttgataataatttttcatattggagcattagtccatagaatatagactatacatggactatgcccaatatcaataaatattccaagc |
382 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||| ||||||||||||| | | ||||||||| ||| ||| |||||||||| ||||||| |||| |
|
|
| T |
5488721 |
ttggttttagtctttgataataattgttcatattggagtattagtccatagagtggacactatacatagaccatgtccaatatcaacaaatattacaagt |
5488622 |
T |
|
| Q |
383 |
aatgtgttctatgctttaggcattattaccgataagaattttattta |
429 |
Q |
| |
|
| ||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
5488621 |
attgtgttctatgttttaggcattattaccgataagaattttattta |
5488575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 283 - 425
Target Start/End: Complemental strand, 5501524 - 5501382
Alignment:
| Q |
283 |
ttggttttagtctttgataataatttttcatattggagcattagtccatagaatatagactatacatggactatgcccaatatcaataaatattccaagc |
382 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||| ||||||||||||| || | ||||||||||||||||| |||||||||| ||||||| ||||| |
|
|
| T |
5501524 |
ttggttttagactttgataataattgttcatattggagtattagtccatagagtagatactatacatggactatgtccaatatcaacaaatattacaagc |
5501425 |
T |
|
| Q |
383 |
aatgtgttctatgctttaggcattattaccgataagaatttta |
425 |
Q |
| |
|
| ||||||||||| |||||| |||||||| ||||||||||||| |
|
|
| T |
5501424 |
attgtgttctatgttttaggtattattactgataagaatttta |
5501382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 1077294 - 1077416
Alignment:
| Q |
52 |
tggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaatattcttcttgatattgatatg |
151 |
Q |
| |
|
||||||||| || || ||| | ||||||||||||||||||| | | || ||||||||| ||||| | ||| |||| |||||| | | || | ||||||| |
|
|
| T |
1077294 |
tggaattgcccgtggactgatttatcttcatcaagattctagattgaggatcatacatcgagatctaaaaccaagtaatattttattagacaatgatatg |
1077393 |
T |
|
| Q |
152 |
attccaaagatagcagattttgg |
174 |
Q |
| |
|
| |||||| ||| |||||||||| |
|
|
| T |
1077394 |
aatccaaaaatatcagattttgg |
1077416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 1107547 - 1107647
Alignment:
| Q |
74 |
tatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaatattcttcttgatattgatatgattccaaagatagcagattttg |
173 |
Q |
| |
|
||||||||||||||||||| | | || ||||||||||||||| | ||| |||| || ||| | || |||| |||||||| || || ||| ||||||||| |
|
|
| T |
1107547 |
tatcttcatcaagattctagattgaggatcatacatagagatctaaaaccaagtaacattttgctagataatgatatgaacccgaaaatatcagattttg |
1107646 |
T |
|
| Q |
174 |
g |
174 |
Q |
| |
|
| |
|
|
| T |
1107647 |
g |
1107647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 24 - 242
Target Start/End: Original strand, 25810553 - 25810771
Alignment:
| Q |
24 |
attggaataagcgcctggaaattattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaac |
123 |
Q |
| |
|
|||||| |||||| ||||||||||||| || |||||||| |||||||||||||| ||||| ||||||||| |||||||||| ||||||||| | || || |
|
|
| T |
25810553 |
attggactaagcgtttggaaattattgacggtattgctcgggggctgttgtatctccatcaggattctacattaagaatcattcatagagatctcaagac |
25810652 |
T |
|
| Q |
124 |
aagcaatattcttcttgatattgatatgattccaaagatagcagattttggtttagccagatcatttatgggagacgaagccgaggctaatacaaataga |
223 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
25810653 |
aagcaatattcttcttgatattcatatgatcccaaagatatccgattttggtttagccagatcatttatgggagaccaagctgaggctaatacaaataga |
25810752 |
T |
|
| Q |
224 |
gtgatgggaacatagtaat |
242 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
25810753 |
gtgatgggaacttagtaat |
25810771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 22689472 - 22689353
Alignment:
| Q |
55 |
aattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaatattcttcttgatattgatatgatt |
154 |
Q |
| |
|
|||||||||||| || | ||||||||||||||||||| | |||||||||||||||| ||| | || ||||||||||| | | || | |||||||| | |
|
|
| T |
22689472 |
aattgctcgaggacttctttatcttcatcaagattctatattaagaatcatacatagggatctaaaggcaagcaatattttagtagacaatgatatgaat |
22689373 |
T |
|
| Q |
155 |
ccaaagatagcagattttgg |
174 |
Q |
| |
|
|||||||| |||||||||| |
|
|
| T |
22689372 |
ccaaagatttcagattttgg |
22689353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 4151018 - 4150885
Alignment:
| Q |
47 |
attgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaatattcttcttgatattg |
146 |
Q |
| |
|
||||| ||||| |||||||| | ||||||||||| ||| || | |||||| ||||||||||||||| | ||| ||||||| || | ||||||| || |
|
|
| T |
4151018 |
attgaaggaatagctcgaggtataatgtatcttcatagagactcgagactaaggatcatacatagagatctaaaagcaagcaacatcttacttgatagtg |
4150919 |
T |
|
| Q |
147 |
atatgattccaaagatagcagattttggtttagc |
180 |
Q |
| |
|
| ||||||||||| ||| |||| || |||||||| |
|
|
| T |
4150918 |
acatgattccaaaaatatcagacttcggtttagc |
4150885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 20303598 - 20303686
Alignment:
| Q |
44 |
attattgatggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaaacaagcaatat |
132 |
Q |
| |
|
||||| || |||||||||||||| ||||||||||||| |||||| | ||||||||| ||||| |||||| |||| ||||| ||||| |
|
|
| T |
20303598 |
attatagaaggaattgctcgaggattgttgtatcttcacagagattcgagactaagaattatacacagagatttgaagacaagtaatat |
20303686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0090
Description:
Target: scaffold0090; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 8418 - 8349
Alignment:
| Q |
52 |
tggaattgctcgagggctgttgtatcttcatcaagattctacactaagaatcatacatagagatatgaaa |
121 |
Q |
| |
|
|||||||||||| ||||| | ||||||||||||||||| | | || |||||||||| |||||| ||||| |
|
|
| T |
8418 |
tggaattgctcgggggcttctttatcttcatcaagattcaagattacgaatcatacacagagatctgaaa |
8349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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