View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7697_low_12 (Length: 237)
Name: NF7697_low_12
Description: NF7697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7697_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 8816072 - 8816294
Alignment:
| Q |
1 |
cttattatgaatgttcataatcatattttgcgaaggaaataaagttaggtcaatatggaacaggtgtacgaacagtaggggggcttgatttcatgtcctc |
100 |
Q |
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| T |
8816072 |
cttattatgaatgttcataatcatattttgagaaggaaataaagttaggtcaatatggaacaggtgtacgaacagtaggggggcttgatttcatgtcctc |
8816171 |
T |
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| Q |
101 |
gacaatcagatttgagagagcatgtgttatcggcccttctttgcctacaagaaatgcagaaccaaatcaataagctcataaaatggtaaaagtaaagaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8816172 |
gacaatcagatttgagagagcatgtgttatcggcccttctttgcctacaagaaatgcagaaccaaatcaataagctcataaaatggtaaaagtaaagaat |
8816271 |
T |
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| Q |
201 |
gttaaatctgctaatgattatat |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
8816272 |
gttaaatctgctaatgattatat |
8816294 |
T |
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