View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7698_high_1 (Length: 692)

Name: NF7698_high_1
Description: NF7698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7698_high_1
NF7698_high_1
[»] chr2 (41 HSPs)
chr2 (245-674)||(33569859-33570296)
chr2 (16-81)||(33570460-33570525)
chr2 (133-195)||(33570346-33570408)
chr2 (597-674)||(37480074-37480150)
chr2 (598-674)||(42327396-42327471)
chr2 (595-674)||(29503268-29503346)
chr2 (596-674)||(34041589-34041666)
chr2 (597-674)||(39714991-39715067)
chr2 (595-674)||(42602551-42602629)
chr2 (598-674)||(42922414-42922490)
chr2 (598-674)||(19244109-19244184)
chr2 (615-674)||(21939124-21939183)
chr2 (596-674)||(4060215-4060292)
chr2 (597-674)||(7799036-7799112)
chr2 (598-674)||(23052524-23052599)
chr2 (598-674)||(28846691-28846766)
chr2 (598-674)||(40416391-40416466)
chr2 (596-663)||(1729814-1729880)
chr2 (599-674)||(16918579-16918653)
chr2 (624-674)||(42420294-42420344)
chr2 (597-674)||(11251086-11251162)
chr2 (597-674)||(21195677-21195753)
chr2 (597-674)||(21213768-21213844)
chr2 (597-674)||(25931005-25931081)
chr2 (633-674)||(33582007-33582048)
chr2 (599-672)||(37755974-37756046)
chr2 (598-674)||(4438980-4439055)
chr2 (598-674)||(11062360-11062435)
chr2 (598-661)||(16381668-16381730)
chr2 (624-674)||(4262303-4262353)
chr2 (596-674)||(19322766-19322843)
chr2 (596-674)||(30808648-30808725)
chr2 (597-674)||(3001378-3001454)
chr2 (633-674)||(3661009-3661050)
chr2 (597-674)||(14500276-14500352)
chr2 (598-631)||(18542944-18542977)
chr2 (597-674)||(29197377-29197453)
chr2 (633-674)||(32687515-32687556)
chr2 (598-674)||(19016031-19016106)
chr2 (602-674)||(24191842-24191913)
chr2 (634-674)||(42860383-42860423)
[»] chr1 (37 HSPs)
chr1 (466-577)||(5947004-5947115)
chr1 (598-674)||(50901581-50901657)
chr1 (602-674)||(17745257-17745328)
chr1 (597-674)||(36371469-36371545)
chr1 (598-670)||(9165200-9165271)
chr1 (466-577)||(19026682-19026783)
chr1 (595-674)||(4566545-4566623)
chr1 (595-670)||(40257396-40257470)
chr1 (596-674)||(21547481-21547558)
chr1 (600-674)||(33700774-33700847)
chr1 (597-674)||(25297771-25297847)
chr1 (599-663)||(18459243-18459307)
chr1 (598-674)||(19528328-19528403)
chr1 (597-674)||(6122793-6122869)
chr1 (597-674)||(8177183-8177259)
chr1 (601-674)||(15786321-15786393)
chr1 (598-663)||(31794276-31794340)
chr1 (597-674)||(51814493-51814569)
chr1 (598-674)||(2219972-2220047)
chr1 (595-674)||(8904411-8904489)
chr1 (596-674)||(29056375-29056453)
chr1 (598-674)||(2799862-2799937)
chr1 (598-674)||(16169979-16170054)
chr1 (598-670)||(52116786-52116857)
chr1 (599-666)||(44126396-44126462)
chr1 (624-674)||(12587295-12587345)
chr1 (633-675)||(15064999-15065041)
chr1 (600-674)||(15904612-15904686)
chr1 (624-674)||(31383799-31383849)
chr1 (597-674)||(6650594-6650670)
chr1 (633-674)||(7219919-7219960)
chr1 (598-675)||(16893394-16893470)
chr1 (605-674)||(17410238-17410306)
chr1 (597-674)||(39012290-39012365)
chr1 (597-666)||(41508830-41508898)
chr1 (609-674)||(52336775-52336839)
chr1 (598-674)||(51703779-51703854)
[»] chr3 (48 HSPs)
chr3 (598-674)||(10445140-10445216)
chr3 (605-674)||(2667869-2667937)
chr3 (597-674)||(10499110-10499186)
chr3 (598-674)||(14186648-14186722)
chr3 (598-674)||(16354893-16354968)
chr3 (596-674)||(30311304-30311381)
chr3 (597-674)||(27093362-27093438)
chr3 (598-674)||(21960551-21960626)
chr3 (596-674)||(8051212-8051289)
chr3 (596-674)||(36720379-36720456)
chr3 (597-674)||(19154630-19154706)
chr3 (597-674)||(31520606-31520682)
chr3 (597-674)||(46518627-46518703)
chr3 (598-674)||(4222141-4222216)
chr3 (598-674)||(31788971-31789046)
chr3 (598-674)||(37788466-37788541)
chr3 (599-674)||(47454618-47454692)
chr3 (598-675)||(8170672-8170748)
chr3 (624-673)||(9557345-9557394)
chr3 (597-674)||(15048062-15048138)
chr3 (598-675)||(35111180-35111256)
chr3 (601-670)||(53412948-53413016)
chr3 (598-674)||(26481927-26482002)
chr3 (597-657)||(26988995-26989053)
chr3 (626-674)||(44743856-44743904)
chr3 (598-674)||(51903879-51903954)
chr3 (595-674)||(8368800-8368878)
chr3 (595-666)||(24481578-24481648)
chr3 (601-656)||(28928898-28928952)
chr3 (598-672)||(2597223-2597296)
chr3 (624-670)||(17554796-17554842)
chr3 (605-674)||(4844512-4844580)
chr3 (605-674)||(4870208-4870276)
chr3 (597-670)||(5499412-5499484)
chr3 (605-674)||(8075128-8075196)
chr3 (633-674)||(20501730-20501771)
chr3 (601-674)||(30510200-30510272)
chr3 (597-674)||(45308903-45308979)
chr3 (641-674)||(49494147-49494180)
chr3 (598-674)||(203090-203165)
chr3 (597-669)||(7975417-7975488)
chr3 (598-674)||(14339610-14339685)
chr3 (598-666)||(16991542-16991609)
chr3 (626-674)||(25035732-25035780)
chr3 (598-674)||(27923044-27923119)
chr3 (598-674)||(28703405-28703480)
chr3 (600-672)||(42799751-42799821)
chr3 (598-674)||(47810745-47810820)
[»] chr8 (37 HSPs)
chr8 (596-674)||(16852338-16852415)
chr8 (596-674)||(19703488-19703565)
chr8 (598-674)||(968362-968437)
chr8 (600-674)||(3624582-3624655)
chr8 (598-674)||(18540298-18540373)
chr8 (600-667)||(2203494-2203560)
chr8 (595-674)||(18897163-18897241)
chr8 (599-674)||(29858050-29858124)
chr8 (596-666)||(5264542-5264611)
chr8 (598-671)||(23874386-23874458)
chr8 (597-674)||(44780115-44780191)
chr8 (595-674)||(3826778-3826856)
chr8 (597-670)||(4830486-4830558)
chr8 (597-674)||(28783059-28783135)
chr8 (598-674)||(11819776-11819851)
chr8 (597-673)||(12988427-12988502)
chr8 (598-670)||(26688865-26688936)
chr8 (598-674)||(29431011-29431086)
chr8 (624-675)||(12281519-12281570)
chr8 (598-670)||(6536514-6536591)
chr8 (597-674)||(8484998-8485074)
chr8 (601-674)||(18546363-18546435)
chr8 (598-674)||(20994458-20994534)
chr8 (598-674)||(27750730-27750805)
chr8 (598-674)||(33017214-33017289)
chr8 (600-674)||(8794346-8794419)
chr8 (597-675)||(22268934-22269010)
chr8 (596-674)||(35641902-35641979)
chr8 (597-650)||(28566104-28566156)
chr8 (597-650)||(28573727-28573779)
chr8 (609-674)||(35690065-35690129)
chr8 (598-674)||(6436556-6436631)
chr8 (598-674)||(6530807-6530881)
chr8 (598-674)||(6569772-6569847)
chr8 (642-674)||(11928732-11928764)
chr8 (598-670)||(23361654-23361725)
chr8 (598-670)||(30483889-30483960)
[»] chr7 (48 HSPs)
chr7 (598-674)||(26459411-26459486)
chr7 (597-674)||(45709709-45709785)
chr7 (598-668)||(42836008-42836077)
chr7 (597-674)||(43215183-43215259)
chr7 (598-674)||(20335832-20335907)
chr7 (598-674)||(39631844-39631919)
chr7 (598-668)||(18011356-18011426)
chr7 (597-674)||(23552117-23552193)
chr7 (598-674)||(22760863-22760938)
chr7 (598-674)||(30442488-30442563)
chr7 (598-674)||(48771938-48772013)
chr7 (603-674)||(7499925-7499995)
chr7 (595-674)||(17041013-17041091)
chr7 (598-665)||(25021345-25021411)
chr7 (596-674)||(14058251-14058328)
chr7 (596-674)||(14368279-14368356)
chr7 (597-675)||(30579334-30579411)
chr7 (598-675)||(27776172-27776248)
chr7 (597-674)||(38374600-38374676)
chr7 (598-674)||(5273591-5273666)
chr7 (598-674)||(26199509-26199584)
chr7 (599-675)||(35513467-35513542)
chr7 (598-674)||(39499720-39499795)
chr7 (598-674)||(43590907-43590982)
chr7 (598-672)||(7801180-7801253)
chr7 (597-674)||(2446307-2446383)
chr7 (601-674)||(15905675-15905746)
chr7 (625-674)||(22035424-22035473)
chr7 (598-675)||(24513797-24513873)
chr7 (598-675)||(25590611-25590687)
chr7 (609-674)||(48079653-48079718)
chr7 (598-674)||(17113795-17113870)
chr7 (598-674)||(18363696-18363771)
chr7 (598-670)||(19553454-19553524)
chr7 (598-674)||(23301603-23301678)
chr7 (597-673)||(23945860-23945935)
chr7 (598-674)||(31835192-31835267)
chr7 (598-674)||(33869446-33869521)
chr7 (598-665)||(3280495-3280561)
chr7 (598-669)||(5579240-5579310)
chr7 (597-674)||(41487361-41487434)
chr7 (601-655)||(45976943-45976996)
chr7 (605-674)||(37085550-37085618)
chr7 (597-674)||(42711957-42712033)
chr7 (598-674)||(2962460-2962534)
chr7 (598-650)||(25956317-25956368)
chr7 (603-671)||(41519268-41519335)
chr7 (598-650)||(45559200-45559251)
[»] chr4 (37 HSPs)
chr4 (598-674)||(37109352-37109427)
chr4 (598-674)||(37274460-37274536)
chr4 (598-674)||(2622396-2622475)
chr4 (598-675)||(46545711-46545787)
chr4 (598-674)||(19238578-19238653)
chr4 (598-674)||(55427201-55427276)
chr4 (596-674)||(19680789-19680866)
chr4 (597-674)||(7949455-7949531)
chr4 (605-674)||(49576895-49576963)
chr4 (598-674)||(39509070-39509145)
chr4 (598-674)||(47044717-47044792)
chr4 (601-674)||(7292799-7292871)
chr4 (597-674)||(37720215-37720291)
chr4 (598-650)||(1730514-1730565)
chr4 (595-674)||(2185033-2185112)
chr4 (598-674)||(31759659-31759734)
chr4 (595-674)||(21660145-21660223)
chr4 (595-674)||(21668909-21668987)
chr4 (603-674)||(26489876-26489946)
chr4 (598-672)||(9241028-9241101)
chr4 (624-674)||(23377981-23378031)
chr4 (613-674)||(38869783-38869843)
chr4 (597-674)||(49225431-49225507)
chr4 (597-674)||(51250523-51250599)
chr4 (598-674)||(8030205-8030280)
chr4 (598-674)||(19229209-19229283)
chr4 (598-674)||(31826609-31826684)
chr4 (596-671)||(24827823-24827897)
chr4 (597-648)||(27965537-27965587)
chr4 (624-674)||(11592154-11592204)
chr4 (597-674)||(12798683-12798759)
chr4 (598-671)||(17618281-17618353)
chr4 (641-674)||(30938220-30938253)
chr4 (601-650)||(41683752-41683800)
chr4 (598-674)||(9936962-9937037)
chr4 (602-670)||(13901746-13901813)
chr4 (598-674)||(28635696-28635771)
[»] chr6 (15 HSPs)
chr6 (597-674)||(33549103-33549179)
chr6 (597-674)||(12188304-12188380)
chr6 (596-669)||(31622997-31623069)
chr6 (596-674)||(10338175-10338252)
chr6 (596-674)||(12234508-12234585)
chr6 (598-674)||(30127400-30127475)
chr6 (604-674)||(34444809-34444878)
chr6 (634-674)||(3858742-3858782)
chr6 (598-674)||(14557962-14558037)
chr6 (598-674)||(21418470-21418545)
chr6 (596-674)||(13330085-13330162)
chr6 (624-670)||(21943433-21943479)
chr6 (598-674)||(14278112-14278186)
chr6 (597-653)||(22693-22748)
chr6 (602-674)||(6776608-6776679)
[»] scaffold0258 (1 HSPs)
scaffold0258 (598-674)||(15324-15399)
[»] chr5 (24 HSPs)
chr5 (597-674)||(14285160-14285236)
chr5 (598-674)||(25627057-25627132)
chr5 (595-674)||(30109309-30109387)
chr5 (595-670)||(30883203-30883277)
chr5 (598-675)||(21549137-21549213)
chr5 (597-674)||(34984805-34984881)
chr5 (598-670)||(892479-892550)
chr5 (598-674)||(16773807-16773882)
chr5 (598-674)||(21589288-21589363)
chr5 (598-674)||(29075781-29075856)
chr5 (596-675)||(16436616-16436693)
chr5 (598-674)||(7918470-7918545)
chr5 (595-674)||(87424-87502)
chr5 (598-676)||(5390851-5390926)
chr5 (598-655)||(43230794-43230852)
chr5 (597-674)||(22737081-22737157)
chr5 (597-674)||(26078052-26078128)
chr5 (597-650)||(26598523-26598575)
chr5 (598-674)||(17028265-17028340)
chr5 (596-670)||(43241687-43241760)
chr5 (624-669)||(4793094-4793139)
chr5 (597-674)||(22020863-22020939)
chr5 (598-674)||(3252290-3252365)
chr5 (598-666)||(14495814-14495881)
[»] scaffold0118 (1 HSPs)
scaffold0118 (598-670)||(41638-41709)
[»] scaffold0002 (1 HSPs)
scaffold0002 (601-670)||(94976-95044)
[»] scaffold0299 (1 HSPs)
scaffold0299 (604-674)||(11534-11603)
[»] scaffold0180 (1 HSPs)
scaffold0180 (609-674)||(19963-20027)
[»] scaffold0291 (1 HSPs)
scaffold0291 (598-674)||(2471-2546)
[»] scaffold0122 (1 HSPs)
scaffold0122 (605-673)||(6921-6988)
[»] scaffold1367 (1 HSPs)
scaffold1367 (604-674)||(841-910)
[»] scaffold0211 (1 HSPs)
scaffold0211 (598-674)||(24053-24128)
[»] scaffold0194 (1 HSPs)
scaffold0194 (602-674)||(13047-13118)


Alignment Details
Target: chr2 (Bit Score: 339; Significance: 0; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 245 - 674
Target Start/End: Complemental strand, 33570296 - 33569859
Alignment:
Q  245 cttgatctaatgttgctcccattccatccaattggattcactaccaactcgaggaatactgttgactcttgagaacttatcaaccttaaagttggcccca 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33570296 cttgatctaatgttgctcccattccatccaattggattcactaccaactcgaggaatactgttgactcttgagaacttatcaaccttaaagttggcccca 33570197  T
Q  345 cacatcactccttcaccgtctatccttggcattgccttcaacttgttcaatggatgctcaaagctcattaaacctccttcactatgaaacatacaccctg 444  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33570196 cacatcactccttcactgtctatccttggcattgccttcaacttgttcaacggatgctcaaagctcattaaacctccttcactatgaaacatacaccctg 33570097  T
Q  445 cattcatgattcaatgttatctcatatcaatatcaaaactatttttattacttccccttgaatgtattgaagggttgtgctttaattggtattttaaaca 544  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33570096 cattcatgattcaatgttatctcatatcaatatcaaaactatttttattacttccccttgaatgtattgaagggttgtgctttaattggtattttaaaca 33569997  T
Q  545 taaaataaattggaatactagcctaaatt-aaaattaatg-------nnnnnnnnnnnataaacccacttgggttggcctagtggtaattggctttggac 636  Q
    ||||||||||||||||||||||||||||| ||||||||||                  |||||||||| ||||||||| |||||||||||||||| ||||    
T  33569996 taaaataaattggaatactagcctaaattaaaaattaatgttttttattttattttttataaacccacatgggttggcttagtggtaattggcttaggac 33569897  T
Q  637 ctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
     ||  |||||||||||||||||||||||||||||||||    
T  33569896 ttggaagtgtgctcttcctcgaggtctcaggttcgatt 33569859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 33570525 - 33570460
Alignment:
Q  16 aagaaaatactaacacaacactatatatgtacttaaaaacacttcactaccttgttgcttagaagg 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33570525 aagaaaatactaacacaacactatatatgtacttaaaaacacttcactaccttgttgcttagaagg 33570460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 33570408 - 33570346
Alignment:
Q  133 ggataaggcaaggtaggtggtggtagggttggctaggaaagtagcattgatgaagtacagtag 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33570408 ggataaggcaaggtaggtggtggtagggttggctaggaaagtagcattgatgaagcacagtag 33570346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 37480074 - 37480150
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  37480074 aaacccacttgggttggcctggtggta-ttggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgatt 37480150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 42327471 - 42327396
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||||| ||||||| ||||||| |||||||||| ||||| |||||||||||||||||    
T  42327471 aacccacttgggttggcctagtggta-ttggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 42327396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 595 - 674
Target Start/End: Original strand, 29503268 - 29503346
Alignment:
Q  595 ataaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||||||||| |||| || ||||||| |||||||||| ||||| |||||||||||||||||    
T  29503268 ataaacccacttgggttggcctagtggta-ttggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 29503346  T

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Target: chr2; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 596 - 674
Target Start/End: Complemental strand, 34041666 - 34041589
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||||||| |||| ||| ||| |||||||||||||| ||||| |||||||||||| ||||    
T  34041666 taaacccacttgggttggcctagtggt-attgacttaggatctgagagtgtgctcctcctcaaggtctcaggtttgatt 34041589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 39714991 - 39715067
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||| | |||||| ||| ||| ||||||| |||||||||| |||||||||||||||||||||||    
T  39714991 aaacccacttgggttggcatggtggta-ttgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 39715067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 595 - 674
Target Start/End: Original strand, 42602551 - 42602629
Alignment:
Q  595 ataaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||||||| |||||||| ||||||| |||||||||| | ||| |||||| ||||| ||||    
T  42602551 ataaacccacttgggttggcctagtggt-attggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgatt 42602629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 42922414 - 42922490
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctc-gaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||||| |||||||| | ||||| |||||||||| |||||  |||||||||||||||||    
T  42922414 aacccacttgggttggcctagtggt-attggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgatt 42922490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 19244109 - 19244184
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||| ||| ||||| ||| ||| |||||||||||||||||| ||| | |||||||||||||||||    
T  19244109 aacccacttgggttggtctactggta-ttgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgatt 19244184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 615 - 674
Target Start/End: Complemental strand, 21939183 - 21939124
Alignment:
Q  615 ctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||| | |||||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  21939183 ctagtggcatttggctttggacttgagagtgtgctcctcctcgagatctcaggttcgatt 21939124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 596 - 674
Target Start/End: Complemental strand, 4060292 - 4060215
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||||||| ||||| ||   |||||||||||||||  ||||| || ||||||||||||||    
T  4060292 taaacccacttgggttggcctagtggt-attggtttgaaacctgagagtgtgcttctcctcaagatctcaggttcgatt 4060215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 7799112 - 7799036
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||| ||| ||||| |||||||| |||| || |||||||||| |||||||| |||||| |||||||    
T  7799112 aaacccacttgggttgtcctggtggt-attggcttgggacttgggagtgtgctcctcctcgagatctcagattcgatt 7799036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 23052599 - 23052524
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||| ||||||||| |||||| ||||||| |||| || |||||||||  ||||| |||||||||||||||||    
T  23052599 aacccacttaggttggcctggtggta-ttggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgatt 23052524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 28846691 - 28846766
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||| |||||  ||||||||| ||| ||| ||||||| |||||||||| ||||||| |||||||||||||||    
T  28846691 aacccacttaggttgatctagtggta-ttgacttgggacctgggagtgtgctcctcctcgatgtctcaggttcgatt 28846766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 40416466 - 40416391
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||||| |||| ||| | ||||| |||| ||||| ||||  |||||||||||||||||    
T  40416466 aacccacttgggttggcctagtggt-attgacttggaacctgggagtatgctcctccttaaggtctcaggttcgatt 40416391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 596 - 663
Target Start/End: Original strand, 1729814 - 1729880
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtct 663  Q
    |||||||||||||||||| |||||||| |||||||| |||| || |||||||||| ||||| ||||||    
T  1729814 taaacccacttgggttgggctagtggt-attggcttgggacttgggagtgtgctcctcctctaggtct 1729880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 599 - 674
Target Start/End: Complemental strand, 16918653 - 16918579
Alignment:
Q  599 acccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||| ||||| || ||| ||| |||||||||| ||||| |||||| ||||| ||||    
T  16918653 acccacttgggttggcctagtggt-attggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggatt 16918579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 624 - 674
Target Start/End: Original strand, 42420294 - 42420344
Alignment:
Q  624 attggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||| |||||||||||||||||||| ||| |||||||| ||||||||    
T  42420294 attggcttaggacctgagagtgtgctcttactcaaggtctcatgttcgatt 42420344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 11251086 - 11251162
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||| ||||||| |||||||| ||||||| |||| ||  ||||||||| ||||| |||||||||||| ||||    
T  11251086 aaacccacttaggttggcttagtggta-ttggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgatt 11251162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 21195753 - 21195677
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||| |||||||| |||||||||| | ||||| | || || |||||||||| ||||| |||||||||||||||||    
T  21195753 aaacccatttgggttgccctagtggta-taggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgatt 21195677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 21213768 - 21213844
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| | |||||||| || |||||| ||||||| ||||||| ||||||| || |||| ||||||||||||||||||    
T  21213768 aaacccgcatgggttggtctggtggta-ttggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgatt 21213844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 25931005 - 25931081
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||| |||||||||||| |||||| |||| || ||||||||||||||| |  ||||||| ||||||| |||||||    
T  25931005 aaacccatttgggttggcctggtggta-ttggtttgggacctgagagtgtgtttatcctcgaagtctcagattcgatt 25931081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 633 - 674
Target Start/End: Original strand, 33582007 - 33582048
Alignment:
Q  633 ggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  33582007 ggacctgagagtgtgctcctccttgaggtctcaggttcgatt 33582048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 599 - 672
Target Start/End: Complemental strand, 37756046 - 37755974
Alignment:
Q  599 acccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcga 672  Q
    |||||||||||||||| | |||||| ||||||| ||||||| || ||||||| | |||||||||||| ||||||    
T  37756046 acccacttgggttggcttggtggta-ttggcttgggacctgggaatgtgctcctactcgaggtctcaagttcga 37755974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 4439055 - 4438980
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||| ||||| ||  ||| ||| |||||||||||||| ||||| ||||| || ||||||||    
T  4439055 aacccacttgggttggcctaatggta-ttaacttgggatctgagagtgtgctcctcctcaaggtcgcatgttcgatt 4438980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 11062360 - 11062435
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||| | |||||||| | || || |||||||||  ||||| |||||||||||| ||||    
T  11062360 aacccacttgggttggcctagtgat-attggcttggaacttgggagtgtgcttctcctcaaggtctcaggtttgatt 11062435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 661
Target Start/End: Complemental strand, 16381730 - 16381668
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggt 661  Q
    ||||||||||||||||||||||||| || ||||| ||| |||||||||| ||| ||||| ||||    
T  16381730 aacccacttgggttggcctagtggt-ataggcttgggatctgagagtgttctcctcctcaaggt 16381668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 624 - 674
Target Start/End: Complemental strand, 4262353 - 4262303
Alignment:
Q  624 attggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||| |||||||  ||||||||| ||||| |||||||||||||||||    
T  4262353 attggcttgggacctggcagtgtgctcctcctcaaggtctcaggttcgatt 4262303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 596 - 674
Target Start/End: Original strand, 19322766 - 19322843
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||  |||||||| ||||| || ||||||| |||||||||| || || ||||||| |||| ||||    
T  19322766 taaacccacttgggttgatctagtggt-attggtttgggacctgggagtgtgctcctcttcaaggtctctggtttgatt 19322843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 596 - 674
Target Start/End: Complemental strand, 30808725 - 30808648
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||| || ||| | ||||||||  ||||||||| | ||||| ||||| ||||||||| |||||||    
T  30808725 taaacccacttgggttggtctggtgat-attggcttgagacctgagaatatgctcctcctcaaggtctcagtttcgatt 30808648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 3001378 - 3001454
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||| ||||||||||||||||||||| |||| |||  || ||  |||||||||| |||| ||| ||||||||||||||    
T  3001378 aaactcacttgggttggcctagtggt-attgacttgagatctaggagtgtgctcctccttgagatctcaggttcgatt 3001454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 633 - 674
Target Start/End: Complemental strand, 3661050 - 3661009
Alignment:
Q  633 ggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||| | |||||||| ||||||||||||||    
T  3661050 ggacctgagagtgtgcccctcctcgagatctcaggttcgatt 3661009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 14500276 - 14500352
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||| ||||||||||||| ||  ||||  || ||| |||||||||| ||||| ||||||||| |||||||    
T  14500276 aaacccacttggtttggcctagtggt-ataagcttgagatctgggagtgtgctcctcctctaggtctcagattcgatt 14500352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 598 - 631
Target Start/End: Original strand, 18542944 - 18542977
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctt 631  Q
    ||||||||||||||||||||||| ||||||||||    
T  18542944 aacccacttgggttggcctagtgataattggctt 18542977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 29197453 - 29197377
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||| | ||||| |||| ||| |||| || |||||||||| |||| || |||||| ||||||||    
T  29197453 aaacccacttgggttggcttggtggt-attgacttgggacttgggagtgtgctcctccttgatgtctcatgttcgatt 29197377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 633 - 674
Target Start/End: Original strand, 32687515 - 32687556
Alignment:
Q  633 ggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||| |||||||||| || |||||||||||||||||||||||    
T  32687515 ggacttgagagtgtgttcctcctcgaggtctcaggttcgatt 32687556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 19016031 - 19016106
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||| ||  ||||| |||||||  ||| || |||||||||| |||||||||||||| ||| ||||    
T  19016031 aacccacttgggttggtctgatggta-ttggcttgagacttgggagtgtgctcctcctcgaggtctcaagtttgatt 19016106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 602 - 674
Target Start/End: Original strand, 24191842 - 24191913
Alignment:
Q  602 cacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| ||||||||  ||||| ||||||| |||||||||||||||||| |||| ||| ||||| | ||||||    
T  24191842 cacttgagttggcctgatggta-ttggcttgggacctgagagtgtgctcctccttgagatctcatgatcgatt 24191913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 634 - 674
Target Start/End: Original strand, 42860383 - 42860423
Alignment:
Q  634 gacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| |||||||||| |||||||||||||| ||||||||    
T  42860383 gacctgggagtgtgctcctcctcgaggtctcaagttcgatt 42860423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 1e-39; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 466 - 577
Target Start/End: Complemental strand, 5947115 - 5947004
Alignment:
Q  466 tcatatcaatatcaaaactatttttattacttccccttgaatgtattgaagggttgtgctttaattggtattttaaacataaaataaattggaatactag 565  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||  ||||||||| ||||||| ||||||||||||||    
T  5947115 tcatatcaatatcaaaactatttttattactttcccttgaatgtatttgagggttgtgctttaattattattttaaaaataaaattaattggaatactag 5947016  T
Q  566 cctaaattaaaa 577  Q
    ||||||||||||    
T  5947015 cctaaattaaaa 5947004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 50901581 - 50901657
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||||||||| ||||||||||||||  |||||||    
T  50901581 aacccacttgggttggcctagtggtaattggcttgggacctggtagtgtgctcctcctcgaggtctcaaattcgatt 50901657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 602 - 674
Target Start/End: Complemental strand, 17745328 - 17745257
Alignment:
Q  602 cacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||| ||||||| ||||||||| |||||||| |||||||||||||| ||||||||    
T  17745328 cacttgggttggcctagtggta-ttggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgatt 17745257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 36371469 - 36371545
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||||| |||||||| | ||||| |||||||||| ||||| |||||| ||||||||||    
T  36371469 aaacccacttgggttggcctagtggt-attggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgatt 36371545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 598 - 670
Target Start/End: Complemental strand, 9165271 - 9165200
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    |||||||||||||||||||||||||| ||||||| ||||||| |||||||||| ||||| | |||||||||||    
T  9165271 aacccacttgggttggcctagtggta-ttggcttgggacctgggagtgtgctcctcctcaaagtctcaggttc 9165200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 466 - 577
Target Start/End: Complemental strand, 19026783 - 19026682
Alignment:
Q  466 tcatatcaatatcaaaactatttttattacttccccttgaatgtattgaagggttgtgctttaattggtattttaaacataaaataaattggaatactag 565  Q
    |||||||||||| |||||||||||||||||||          |||||  |||||||||||||||||  ||||||||| ||||||| ||| ||||||||||    
T  19026783 tcatatcaatattaaaactatttttattactt----------gtattagagggttgtgctttaattattattttaaaaataaaatcaatcggaatactag 19026694  T
Q  566 cctaaattaaaa 577  Q
    ||||||||||||    
T  19026693 cctaaattaaaa 19026682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 595 - 674
Target Start/End: Original strand, 4566545 - 4566623
Alignment:
Q  595 ataaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||||| || ||||||| | ||||| |||||||||| |||||  ||||||||||||||||    
T  4566545 ataaacccacttgggttggcctagtgata-ttggcttggaacctgggagtgtgctcctcctcagggtctcaggttcgatt 4566623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 595 - 670
Target Start/End: Original strand, 40257396 - 40257470
Alignment:
Q  595 ataaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    |||||||||||||||||||||| |||||| |||||||  |||||| |||||||||| |||||||||||||| ||||    
T  40257396 ataaacccacttgggttggcctggtggta-ttggcttgagacctgggagtgtgctcctcctcgaggtctcaagttc 40257470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 596 - 674
Target Start/End: Complemental strand, 21547558 - 21547481
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| ||||||||||||||||||||| ||||||| |||| || ||| |||||| |||||||||| ||||||||||||    
T  21547558 taaaccgacttgggttggcctagtggta-ttggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgatt 21547481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 600 - 674
Target Start/End: Complemental strand, 33700847 - 33700774
Alignment:
Q  600 cccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||| ||||||| | | ||| |||||||||| ||||| |||||||||||||||||    
T  33700847 cccacttgggttggcctagtggta-ttggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgatt 33700774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 25297771 - 25297847
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||| ||||||||| ||| ||| ||| |||||||||||||| |||||||||||| ||||| ||||    
T  25297771 aaacccacttgggttggtctagtggta-ttgacttaggatctgagagtgtgctcctcctcgaggtctgaggtttgatt 25297847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 599 - 663
Target Start/End: Complemental strand, 18459307 - 18459243
Alignment:
Q  599 acccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtct 663  Q
    ||||||||||||||| ||||||||||||||||| |||| || |||||||||| |||| |||||||    
T  18459307 acccacttgggttggtctagtggtaattggcttgggacttgggagtgtgctcctccttgaggtct 18459243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 19528403 - 19528328
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||| |||||| ||||||| ||| ||  |||||||||| ||||| |||||||||||||||||    
T  19528403 aacccacttgggttggcctggtggta-ttggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgatt 19528328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 6122793 - 6122869
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||| |||||||| |||||||||| | ||||| |||| || |||||||||| ||||| |||||||||||||||||    
T  6122793 aaacccatttgggttgccctagtggta-taggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgatt 6122869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 8177259 - 8177183
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||| ||| ||||||||||||||| ||||||| ||| ||| |||||||||| ||||| |||| ||||||||||||    
T  8177259 aaacccatttgagttggcctagtggta-ttggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgatt 8177183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 601 - 674
Target Start/End: Complemental strand, 15786393 - 15786321
Alignment:
Q  601 ccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||| ||||| ||| ||||||| ||| ||| |||||||||| ||||| |||||||||||||||||    
T  15786393 ccacttgggttggtctagtagta-ttggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 15786321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 598 - 663
Target Start/End: Complemental strand, 31794340 - 31794276
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtct 663  Q
    ||||||||||||||||||||||||| |||||||| |||| || |||||||||| ||||| ||||||    
T  31794340 aacccacttgggttggcctagtggt-attggcttgggacttgggagtgtgctcctcctcaaggtct 31794276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 51814493 - 51814569
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||  ||||| ||| |||  || |||||||||||||| ||||| |||||||||||||||||    
T  51814493 aaacccacttgggttggcctgatggta-ttgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgatt 51814569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 2219972 - 2220047
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||  || |||||| ||||||| | |||||| ||||||||  |||||||||||||||||||||||    
T  2219972 aacccacttgggttgttctggtggta-ttggcttggaacctgaaagtgtgcttctcctcgaggtctcaggttcgatt 2220047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 595 - 674
Target Start/End: Original strand, 8904411 - 8904489
Alignment:
Q  595 ataaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||||| || |||| ||| |||  || |||||||||| ||||| |||||||| ||||||||    
T  8904411 ataaacccacttgggttggcctagtagt-attgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgatt 8904489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 596 - 674
Target Start/End: Original strand, 29056375 - 29056453
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||| | ||||||| |||| || ||||||| |||||||||| ||||  || | ||||||||||||    
T  29056375 taaacccacttgggttggtccagtggtatttggtttgggacctgggagtgtgctcatcctgaagttttcaggttcgatt 29056453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 2799862 - 2799937
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||| | |||||||||||||| | |||||  || ||| |||||||||| ||||| |||||||||||||||||    
T  2799862 aacccacttcgcttggcctagtggta-taggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgatt 2799937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 16170054 - 16169979
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||| |||| |||||| ||| ||| ||||||| ||||||| || ||||| |||| ||||||||||||    
T  16170054 aacccacttgggttagcctggtggta-ttgacttgggacctgggagtgtgttcctcctcaaggtttcaggttcgatt 16169979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 670
Target Start/End: Complemental strand, 52116857 - 52116786
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    |||||| |||||||||||| |||||| ||||||| |||| || |||||||||| ||||| | |||||||||||    
T  52116857 aacccagttgggttggcctggtggta-ttggcttgggacttgggagtgtgctcctcctcaatgtctcaggttc 52116786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 599 - 666
Target Start/End: Original strand, 44126396 - 44126462
Alignment:
Q  599 acccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcag 666  Q
    |||||||||||||||||| |||||| ||| | | ||||||| |||||||||| ||| |||||||||||    
T  44126396 acccacttgggttggcctggtggta-ttgacctgggacctgggagtgtgctcctccacgaggtctcag 44126462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 624 - 674
Target Start/End: Original strand, 12587295 - 12587345
Alignment:
Q  624 attggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||| ||| ||| ||| |||||||||| |||||||||||||||||||||||    
T  12587295 attgacttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgatt 12587345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 633 - 675
Target Start/End: Original strand, 15064999 - 15065041
Alignment:
Q  633 ggacctgagagtgtgctcttcctcgaggtctcaggttcgattt 675  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||    
T  15064999 ggacctgagagtgtgctcatcctcaaggtctcaggttcaattt 15065041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 600 - 674
Target Start/End: Original strand, 15904612 - 15904686
Alignment:
Q  600 cccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||| |||||| ||||||||||||||||| ||||||| |||| | ||| ||||| |  |||||| |||||||    
T  15904612 cccacttaggttggtctagtggtaattggcttaggacctgggagtatcctcctcctcaaaatctcagattcgatt 15904686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 624 - 674
Target Start/End: Complemental strand, 31383849 - 31383799
Alignment:
Q  624 attggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||| ||||||| |||||||||| |||| | ||||||||||||||||    
T  31383849 attggcttgggacctgggagtgtgctcctccttggggtctcaggttcgatt 31383799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 6650594 - 6650670
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||| || ||||||||||||||| |||||||| ||| | | |||| ||||| ||||| | |||||||||||||||    
T  6650594 aaacccaattaggttggcctagtggt-attggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgatt 6650670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 633 - 674
Target Start/End: Complemental strand, 7219960 - 7219919
Alignment:
Q  633 ggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||| ||||||||||||| ||||||| |||||||||||||||    
T  7219960 ggacatgagagtgtgctcctcctcgaagtctcaggttcgatt 7219919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 598 - 675
Target Start/End: Original strand, 16893394 - 16893470
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgattt 675  Q
    ||||||||||||||| |||  ||||| |||||||  ||  || |||||| ||| ||||||||||||||||||||||||    
T  16893394 aacccacttgggttgacctgttggta-ttggcttgagatttgggagtgtactcctcctcgaggtctcaggttcgattt 16893470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 605 - 674
Target Start/End: Original strand, 17410238 - 17410306
Alignment:
Q  605 ttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||| ||||| || ||| ||| ||||||| || |||||||| ||||| ||||||||    
T  17410238 ttgggttggcctagtggt-attggtttgggatctgggagtgtggtcctcctcgagatctcaagttcgatt 17410306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 39012290 - 39012365
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||| |||||||||||||||  ||||||| ||||||  |||||||||||| ||| |||||| ||||| ||||    
T  39012290 aaacccactttggttggcctagtggt-gttggcttgggaccttggagtgtgctctt-ctcaaggtcttaggtttgatt 39012365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 666
Target Start/End: Original strand, 41508830 - 41508898
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcag 666  Q
    |||||||||||||||||||| ||||| | ||| || ||| ||| |||||||||| ||||| |||||||||    
T  41508830 aaacccacttgggttggcctggtggt-actggtttgggatctgggagtgtgctcctcctcaaggtctcag 41508898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 609 - 674
Target Start/End: Complemental strand, 52336839 - 52336775
Alignment:
Q  609 gttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||| ||||||| ||| ||| |||||||||| ||||  || ||||||||||||||    
T  52336839 gttggcctagtggta-ttggcttgggatctgggagtgtgctcctccttaagatctcaggttcgatt 52336775  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 51703779 - 51703854
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| ||||||||| ||||||||| ||||||| | | ||| |||||||||| ||||| | || ||||||||||||    
T  51703779 aacccatttgggttggtctagtggta-ttggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgatt 51703854  T

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Target: chr3 (Bit Score: 61; Significance: 8e-26; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 10445216 - 10445140
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||| ||||||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  10445216 aacccacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 10445140  T

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Target: chr3; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 605 - 674
Target Start/End: Original strand, 2667869 - 2667937
Alignment:
Q  605 ttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||| |||||| ||||||| ||| ||| ||||||||||||||||||||||||||||||||||    
T  2667869 ttgggttggcctggtggta-ttggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgatt 2667937  T

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Target: chr3; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 10499186 - 10499110
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||| |||||| ||||||| ||| ||| |||| |||||||||| ||||||||||||||||||    
T  10499186 aaacccacttgggttggcctggtggta-ttggcttgggatctgggagtctgctcttccttgaggtctcaggttcgatt 10499110  T

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Target: chr3; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 14186648 - 14186722
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||||| |||| ||| ||||||| |||||||||| ||||| |||||||||||||||||    
T  14186648 aacccacttgggttggcctagtggt-attgtcttgggacctg-gagtgtgctcctcctcaaggtctcaggttcgatt 14186722  T

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Target: chr3; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 16354968 - 16354893
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||||| ||||||| | ||||| |||||||||| |||||  ||||||||||||||||    
T  16354968 aacccacttgggttggcctagtggta-ttggcttggaacctgtgagtgtgctcctcctcagggtctcaggttcgatt 16354893  T

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Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 596 - 674
Target Start/End: Original strand, 30311304 - 30311381
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||| |||||||||||||||||| | ||||| ||| ||| |||||||||| ||||| |||||||||||||||||    
T  30311304 taaacccacctgggttggcctagtggta-taggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 30311381  T

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Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 27093438 - 27093362
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||||| |||||||| | || || |||||||||| ||||| |||||||||||| ||||    
T  27093438 aaacccacttgggttggcctagtggt-attggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgatt 27093362  T

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Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 21960551 - 21960626
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| ||||||||  || |||||| ||||||| |||||||||||||||||| ||||||||||||||| |||||||    
T  21960551 aacccaattgggttgcgctggtggta-ttggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgatt 21960626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 596 - 674
Target Start/End: Original strand, 8051212 - 8051289
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||| ||||| |||||||| |||||||  ||| ||||  |||||||||||||| ||||||||    
T  8051212 taaacccacttgggttggcctggtggt-attggcttgggacctggcagtatgcttctcctcgaggtctcaagttcgatt 8051289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 596 - 674
Target Start/End: Original strand, 36720379 - 36720456
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||| || |||||| ||||||| |||  || |||||||||| |||||||||| ||||||||||||    
T  36720379 taaacccacttgggttggtctggtggta-ttggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgatt 36720456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 19154630 - 19154706
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||| ||||||||||||||| ||| |||||||  | ||||||||||||||| ||||  |||||||||||||||||    
T  19154630 aaacccatttgggttggcctagttgta-ttggcttgaggcctgagagtgtgctcctcctaaaggtctcaggttcgatt 19154706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 31520682 - 31520606
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||| |||| | ||||||| ||| ||| |||||||||| |||||||||||| ||||| ||||    
T  31520682 aaacccacttgggttggcctggtggca-ttggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgatt 31520606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 46518627 - 46518703
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||| ||||||| |||||||| ||| ||| |||||||||| ||||| |||| ||||||| ||||    
T  46518627 aaacccacttgggttggcatagtggt-attggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgatt 46518703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 4222141 - 4222216
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||| ||||||| |||||||| ||| ||| |||||||||| ||||| | |||| ||||||||||    
T  4222141 aacccacttgggttggcttagtggt-attggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgatt 4222216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 31789046 - 31788971
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||| || |||||||| ||| ||| |||||||||| |||||||||| | ||||| ||||    
T  31789046 aacccacttgggttggcctagt-gttattggcttgggatctgggagtgtgctcctcctcgaggttttaggtttgatt 31788971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 37788541 - 37788466
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||| ||||||| ||| ||| | ||||  |||||||||| ||||| |||||||||||||||||    
T  37788541 aacccacttgggttggcccagtggta-ttgacttggaacctaggagtgtgctcctcctcaaggtctcaggttcgatt 37788466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 599 - 674
Target Start/End: Complemental strand, 47454692 - 47454618
Alignment:
Q  599 acccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||  ||||||||| |||||||  || ||  |||||||||| |||||||||||||||||||||||    
T  47454692 acccacttgggttgttctagtggta-ttggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgatt 47454618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 675
Target Start/End: Original strand, 8170672 - 8170748
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgattt 675  Q
    |||||| ||||||||||||||||||| |||||||   || || |||||||||| | ||| ||||||||||||||||||    
T  8170672 aacccatttgggttggcctagtggta-ttggcttgaaacttgggagtgtgctcctactcaaggtctcaggttcgattt 8170748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 673
Target Start/End: Original strand, 9557345 - 9557394
Alignment:
Q  624 attggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgat 673  Q
    |||||||| ||| |||||||||||||| |||||||| |||||||||||||    
T  9557345 attggcttgggatctgagagtgtgctcctcctcgagatctcaggttcgat 9557394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 15048138 - 15048062
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||| || ||||| | ||||| ||| ||| || ||||||| ||||| |||||||||||||||||    
T  15048138 aaacccacttgggttggcttaatggta-taggcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgatt 15048062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 675
Target Start/End: Original strand, 35111180 - 35111256
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgattt 675  Q
    ||||||||||| |||||||||||| | |||  ||  |||||| |||||||||| |||||||||||||| |||||||||    
T  35111180 aacccacttggattggcctagtggca-ttgatttgagacctgggagtgtgctcatcctcgaggtctcatgttcgattt 35111256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 601 - 670
Target Start/End: Original strand, 53412948 - 53413016
Alignment:
Q  601 ccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    ||||||||||||| ||||||||| |||||||   ||||| |||||||||| ||||| |||||||||||||    
T  53412948 ccacttgggttggtctagtggta-ttggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttc 53413016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 26481927 - 26482002
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||| || | |||||||| ||||| |||||||||||||||||| ||||| | || | ||||||||||    
T  26481927 aacccacttgggttagcttggtggtaat-ggcttgggacctgagagtgtgctcctcctcaaagttttaggttcgatt 26482002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 597 - 657
Target Start/End: Original strand, 26988995 - 26989053
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcg 657  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||||| ||||| ||||||    
T  26988995 aaacccacttgggttggcctagtggt-attggc-ttggatctgagagtttgctcctcctcg 26989053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 626 - 674
Target Start/End: Complemental strand, 44743904 - 44743856
Alignment:
Q  626 tggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| ||| ||| |||||||||| |||||||||||||||||||||||    
T  44743904 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgatt 44743856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 51903954 - 51903879
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||| ||||||| |||  ||||| ||||||| ||| ||| |||||||||| |||||| ||||||||||||||||    
T  51903954 aacccacctgggttgacctgttggta-ttggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgatt 51903879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 595 - 674
Target Start/End: Complemental strand, 8368878 - 8368800
Alignment:
Q  595 ataaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||| ||| ||||||||||||||| ||| |||   |||||  ||||||||| |||||||||||||||||| ||||    
T  8368878 ataaacccaattgagttggcctagtggta-ttgacttgaaacctggtagtgtgctcatcctcgaggtctcaggtttgatt 8368800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 595 - 666
Target Start/End: Original strand, 24481578 - 24481648
Alignment:
Q  595 ataaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcag 666  Q
    ||||||||||||| ||||| |||||||| ||||| || |||| |||||||||||| || ||||| |||||||    
T  24481578 ataaacccacttgagttggtctagtggt-attggtttgggacttgagagtgtgctttttctcgacgtctcag 24481648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 656
Target Start/End: Complemental strand, 28928952 - 28928898
Alignment:
Q  601 ccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctc 656  Q
    |||||||| |||||||||||||| ||||||| ||| |||||||||||||| |||||    
T  28928952 ccacttggattggcctagtggta-ttggcttgggatctgagagtgtgctcctcctc 28928898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 598 - 672
Target Start/End: Complemental strand, 2597296 - 2597223
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcga 672  Q
    |||||||||||||||| || |||||| ||||||| |||  |  |||||||||| |||| ||||||||||||||||    
T  2597296 aacccacttgggttggtctggtggta-ttggcttcggatttaggagtgtgctcctccttgaggtctcaggttcga 2597223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 624 - 670
Target Start/End: Original strand, 17554796 - 17554842
Alignment:
Q  624 attggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    |||||||| ||||||| |||||||||||||||| ||| |||||||||    
T  17554796 attggcttgggacctgggagtgtgctcttcctcaagggctcaggttc 17554842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 605 - 674
Target Start/End: Complemental strand, 4844580 - 4844512
Alignment:
Q  605 ttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||| || |||||| ||| ||| ||| ||| |||||||||| |||||||||||||||| ||||||    
T  4844580 ttgggttggtctggtggta-ttgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgatt 4844512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 605 - 674
Target Start/End: Complemental strand, 4870276 - 4870208
Alignment:
Q  605 ttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||| || |||||| ||| ||| ||| ||| |||||||||| |||||||||||||||| ||||||    
T  4870276 ttgggttggtctggtggta-ttgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgatt 4870208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 670
Target Start/End: Complemental strand, 5499484 - 5499412
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    |||||||||||||||||||| ||||| |||| |||  || |||||||||||||| ||||  |||||| ||||||    
T  5499484 aaacccacttgggttggcctggtggt-attgacttgagatctgagagtgtgctcctccttaaggtctaaggttc 5499412  T

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Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 605 - 674
Target Start/End: Complemental strand, 8075196 - 8075128
Alignment:
Q  605 ttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||| |||||||||| | ||||| |||| || |||||||||| ||||| |||| ||||||||||||    
T  8075196 ttgggttgccctagtggta-taggcttgggacttgggagtgtgctcctcctcaaggtttcaggttcgatt 8075128  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 633 - 674
Target Start/End: Original strand, 20501730 - 20501771
Alignment:
Q  633 ggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||| ||||  |||||||||||||||||    
T  20501730 ggacctgagagtgtgctcctccttaaggtctcaggttcgatt 20501771  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 601 - 674
Target Start/End: Complemental strand, 30510272 - 30510200
Alignment:
Q  601 ccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||| ||| |||||| | ||||| ||||||  |||| ||||| | |||||||||||||||||||||    
T  30510272 ccacttgggttgtcctggtggtact-ggcttgggacctaggagtatgctccttctcgaggtctcaggttcgatt 30510200  T

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Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 45308979 - 45308903
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||| |||||||||||  || |||||| |||| || |||| || |||| ||||| |||||||||||||||||||||||    
T  45308979 aaactcacttgggttgttctggtggta-ttggtttgggacttgtgagtatgctcctcctcgaggtctcaggttcgatt 45308903  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 641 - 674
Target Start/End: Complemental strand, 49494180 - 49494147
Alignment:
Q  641 gagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||||||||| ||||    
T  49494180 gagtgtgctcttcctcgaggtctcaggtttgatt 49494147  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 203090 - 203165
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||||| |||| ||| ||| | | ||||||||| |||||  |||| | ||||||||||    
T  203090 aacccacttgggttggcctagtggt-attgacttgggatcagggagtgtgcttttccttaaggtttgaggttcgatt 203165  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 597 - 669
Target Start/End: Original strand, 7975417 - 7975488
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggtt 669  Q
    ||||||| || ||||||||||||||| || ||||| ||| ||| |||||||||| ||||| |||||| |||||    
T  7975417 aaacccatttaggttggcctagtggt-ataggcttgggatctgggagtgtgctcctcctcaaggtcttaggtt 7975488  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 14339610 - 14339685
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| |||| ||||||| |||||| ||||||| |||  || |||||||||| ||||| | |||||||||||||||    
T  14339610 aacccagttggattggcctggtggta-ttggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgatt 14339685  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 666
Target Start/End: Original strand, 16991542 - 16991609
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcag 666  Q
    |||||| |||||||||||| ||||| |||||||| ||| ||| |||||| |||||| | ||||||||||    
T  16991542 aacccatttgggttggcctggtggt-attggcttgggatctgggagtgtactcttctttgaggtctcag 16991609  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 626 - 674
Target Start/End: Original strand, 25035732 - 25035780
Alignment:
Q  626 tggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| |||||||||| ||||||| |||||||| | ||||||||||||    
T  25035732 tggcttgggacctgagaatgtgctcctcctcgagatttcaggttcgatt 25035780  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 27923119 - 27923044
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||| ||||||||| |||||| ||||||| |||| ||  ||||||||| |||||   |||||||||||||||    
T  27923119 aacccacttaggttggcctggtggta-ttggcttgggacatggaagtgtgctcctcctcatagtctcaggttcgatt 27923044  T

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Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 28703480 - 28703405
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||| | |||| || || |||| ||| ||| |||||||||| || || |||||||||||||||||    
T  28703480 aacccacttgggttggtccagtgata-ttagcttgggatctgggagtgtgctcctcttcaaggtctcaggttcgatt 28703405  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 600 - 672
Target Start/End: Complemental strand, 42799821 - 42799751
Alignment:
Q  600 cccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcga 672  Q
    ||||||||||||||||| |||||  ||||||| ||||||  |||||||||| | ||| |||||||||||||||    
T  42799821 cccacttgggttggcctggtggt-gttggcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcga 42799751  T

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Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 47810820 - 47810745
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||| || |||||| |||||||||| | || |||||||||| ||| | ||||||| |||| ||||    
T  47810820 aacccacttgggttggtctggtggta-ttggctttggtcttgggagtgtgctcctccgcaaggtctcgggtttgatt 47810745  T

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Target: chr8 (Bit Score: 59; Significance: 1e-24; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 596 - 674
Target Start/End: Original strand, 16852338 - 16852415
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  16852338 taaacccacttgggttggcctagtggta-ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 16852415  T

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Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 596 - 674
Target Start/End: Complemental strand, 19703565 - 19703488
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  19703565 taaacccacttgggttggcctagtggta-ttggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgatt 19703488  T

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Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 968362 - 968437
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||| |||||||| |||||| ||||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  968362 aacccacttgagttggcctggtggta-ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 968437  T

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Target: chr8; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 600 - 674
Target Start/End: Original strand, 3624582 - 3624655
Alignment:
Q  600 cccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||||||| || || |||||||||||||||||    
T  3624582 cccacttgggttggcctagtggta-ttggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgatt 3624655  T

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Target: chr8; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 18540298 - 18540373
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||||| ||||||| ||||||| |||||| ||  ||||| |||||||||||||||||    
T  18540298 aacccacttgggttggcctagtggta-ttggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgatt 18540373  T

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Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 600 - 667
Target Start/End: Original strand, 2203494 - 2203560
Alignment:
Q  600 cccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcagg 667  Q
    ||||||||||||||||||||||| |||||||| ||||||| |||||||||| ||||| ||||||||||    
T  2203494 cccacttgggttggcctagtggt-attggcttgggacctgggagtgtgctcctcctcaaggtctcagg 2203560  T

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Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 595 - 674
Target Start/End: Original strand, 18897163 - 18897241
Alignment:
Q  595 ataaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||||||||  |||| || |||||| ||||||||||| ||||| |||||||| ||||||||    
T  18897163 ataaacccacttgggttggcctagtggt-gttggtttgggaccttagagtgtgctcctcctcaaggtctcatgttcgatt 18897241  T

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Target: chr8; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 599 - 674
Target Start/End: Complemental strand, 29858124 - 29858050
Alignment:
Q  599 acccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||| ||||||| |||||| ||||||| ||||| | |||||||||| |||||||||||||||||||||||    
T  29858124 acccacttggattggcctggtggta-ttggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgatt 29858050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 596 - 666
Target Start/End: Original strand, 5264542 - 5264611
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcag 666  Q
    ||||||||||||||||||||||||||| |||||||| | ||||| || ||||||| |||||||||||||||    
T  5264542 taaacccacttgggttggcctagtggt-attggcttggaacctgggaatgtgctcctcctcgaggtctcag 5264611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 671
Target Start/End: Complemental strand, 23874458 - 23874386
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcg 671  Q
    ||||||||||||||||||||||||| |||||||| ||||||| || | ||| | ||||||||||||||||||||    
T  23874458 aacccacttgggttggcctagtggt-attggcttgggacctgggaatctgcgcctcctcgaggtctcaggttcg 23874386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 44780191 - 44780115
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||||| | ||||||| |||| || |||||||||| ||||| |||||||||||| ||||    
T  44780191 aaacccacttgggttggcctagtggca-ttggcttgggacttgggagtgtgctcctcctcaaggtctcaggtttgatt 44780115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 595 - 674
Target Start/End: Complemental strand, 3826856 - 3826778
Alignment:
Q  595 ataaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||||||| ||||||||   |  ||||||||||||| ||| |||| ||||||||||||||    
T  3826856 ataaacccacttgggttggcctagtggt-attggcttgccatttgagagtgtgctcctccacgagatctcaggttcgatt 3826778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 597 - 670
Target Start/End: Original strand, 4830486 - 4830558
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    |||||||||||||||||||| |||||| |||  || ||| ||||||||||| || |||||||||||||||||||    
T  4830486 aaacccacttgggttggcctggtggtatttgt-ttgggatctgagagtgtgttcctcctcgaggtctcaggttc 4830558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 28783059 - 28783135
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||| | ||||| ||||||||  |||||| |||||||||| ||||| |||||||| ||||||||    
T  28783059 aaacccacttgggttggcttggtggt-attggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgatt 28783135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 11819776 - 11819851
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| |||||||| |||||||||| | ||||| |||| || |||||||||| ||||| |||||||||||||||||    
T  11819776 aacccatttgggttgccctagtggta-taggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgatt 11819851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 597 - 673
Target Start/End: Original strand, 12988427 - 12988502
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgat 673  Q
    |||||||||||| ||||||||||||| |||||||| | |||||  ||||||||| ||||| |||| |||||||||||    
T  12988427 aaacccacttggattggcctagtggt-attggcttggaacctggaagtgtgctcctcctcaaggtttcaggttcgat 12988502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 670
Target Start/End: Original strand, 26688865 - 26688936
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    ||||||||||||||||||| |||||  ||||||| ||||||  |||||||||| ||||| |||||||||||||    
T  26688865 aacccacttgggttggcctggtggtg-ttggcttgggaccttggagtgtgctcctcctcaaggtctcaggttc 26688936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 29431011 - 29431086
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||| | |||| ||||||| |||| || |||||||||| |||| |||| |||||||||||||    
T  29431011 aacccacttgggttggcctggcggta-ttggcttgggacttgggagtgtgctcctccttgaggcctcaggttcgatt 29431086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 624 - 675
Target Start/End: Original strand, 12281519 - 12281570
Alignment:
Q  624 attggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgattt 675  Q
    |||||||| |||||||||||||||| | ||||||||||||||| ||||||||    
T  12281519 attggcttgggacctgagagtgtgcccctcctcgaggtctcagattcgattt 12281570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 670
Target Start/End: Original strand, 6536514 - 6536591
Alignment:
Q  598 aacccacttgggttggcctagtggta-----attggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    ||||||||| ||||||||||||||||     |||||||| ||||||  |||||||||| ||||| |||||||||||||    
T  6536514 aacccacttaggttggcctagtggtagtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttc 6536591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 8484998 - 8485074
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||| ||||| ||| |||| ||||||| |||||||||| || | |||||||||  |||||||    
T  8484998 aaacccacttgggttggcctggtggt-atttgcttgggacctgtgagtgtgctcctctttgaggtctcattttcgatt 8485074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 601 - 674
Target Start/End: Complemental strand, 18546435 - 18546363
Alignment:
Q  601 ccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| |||||| ||||||||| |||  || |||||||||||  ||||| |||||||||||||||||||||||    
T  18546435 ccacttaggttggtctagtggta-ttgatttgggacctgagagcatgctcctcctcgaggtctcaggttcgatt 18546363  T

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Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 20994534 - 20994458
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgct-cttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||||| |||| ||| ||||||| ||||||||| || |||| | |||||||| ||||||    
T  20994534 aacccacttgggttggcctagtggt-attgacttgggacctgggagtgtgctcctccctcaaagtctcaggatcgatt 20994458  T

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Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 27750730 - 27750805
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| |||||||| ||| |||||| | ||||| |||| || |||||||||| ||||| |||||||||||||||||    
T  27750730 aacccatttgggttgccctcgtggta-taggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgatt 27750805  T

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Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 33017214 - 33017289
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||| ||  || ||||||| | |||||  ||||||||| ||||| |||||||||||||||||    
T  33017214 aacccacttgggttggccttgtcata-ttggcttggaacctggaagtgtgctcctcctcaaggtctcaggttcgatt 33017289  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 600 - 674
Target Start/End: Complemental strand, 8794419 - 8794346
Alignment:
Q  600 cccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||| ||||| |||||||| ||||||| | |||||  ||||||||| |||||  ||||||||||||||||    
T  8794419 cccacttggattggcatagtggta-ttggcttggaacctggaagtgtgctcctcctcagggtctcaggttcgatt 8794346  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 597 - 675
Target Start/End: Complemental strand, 22269010 - 22268934
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgattt 675  Q
    |||||||||||||||||||| |||||  ||||||| ||||||  |||||||||||| ||| |||||||| ||| |||||    
T  22269010 aaacccacttgggttggcctggtggt-gttggcttgggaccttggagtgtgctctt-ctcaaggtctcaagtttgattt 22268934  T

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Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 596 - 674
Target Start/End: Complemental strand, 35641979 - 35641902
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||| || |||||| | |||||  ||  || |||||||||| ||||||| |||||||||||||||    
T  35641979 taaacccacttgggttggtctggtggta-tcggcttgagatttgggagtgtgctcctcctcgatgtctcaggttcgatt 35641902  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 650
Target Start/End: Original strand, 28566104 - 28566156
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctc 650  Q
    |||||||||||||||| ||||||||| ||||| || |||||| |||||||||||    
T  28566104 aaacccacttgggttgacctagtggt-attggtttgggaccttagagtgtgctc 28566156  T

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Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 650
Target Start/End: Original strand, 28573727 - 28573779
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctc 650  Q
    |||||||||||||||| ||||||||| ||||| || |||||| |||||||||||    
T  28573727 aaacccacttgggttgacctagtggt-attggtttgggaccttagagtgtgctc 28573779  T

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Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 609 - 674
Target Start/End: Complemental strand, 35690129 - 35690065
Alignment:
Q  609 gttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||| ||||||| ||| ||| | || ||||| ||||| |||||||||||||||||    
T  35690129 gttggcctagtggta-ttggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgatt 35690065  T

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Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 6436631 - 6436556
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||| ||| ||||| |||||||| |||| |  |||||||||| ||| | ||||||||| |||||||    
T  6436631 aacccacttgggttgccctggtggt-attggcttgggacttaggagtgtgctcctccgcaaggtctcagattcgatt 6436556  T

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Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 6530807 - 6530881
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||| |||||  ||||||| ||||||  |||||||||| | ||| | |||||||||||||||    
T  6530807 aacccacttgggttggcctggtggt-gttggcttgggacctaggagtgtgctcct-ctcaatgtctcaggttcgatt 6530881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 6569847 - 6569772
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||| ||||||||||||| | |||||||| ||| ||| |||||||||| ||||  |||| ||| ||||||||    
T  6569847 aacccacttaggttggcctagtgat-attggcttgggatctgggagtgtgctcctcctttaggtttcatgttcgatt 6569772  T

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Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 642 - 674
Target Start/End: Complemental strand, 11928764 - 11928732
Alignment:
Q  642 agtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||| |||||||||||||||||||||||    
T  11928764 agtgtgctcctcctcgaggtctcaggttcgatt 11928732  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 670
Target Start/End: Complemental strand, 23361725 - 23361654
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    ||||||||||||||| ||| |||||| ||| ||| |||  || |||||||||| ||||| |||||||||||||    
T  23361725 aacccacttgggttgacctggtggta-ttgacttgggatatgggagtgtgctcctcctcaaggtctcaggttc 23361654  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 670
Target Start/End: Complemental strand, 30483960 - 30483889
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    |||||||||||||||||| |||||| |||||||| |||  || |||||||||| |||||   |||||||||||    
T  30483960 aacccacttgggttggcccagtggt-attggcttgggatatgggagtgtgctcctcctcagagtctcaggttc 30483889  T

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Target: chr7 (Bit Score: 53; Significance: 5e-21; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 26459486 - 26459411
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||||| ||||||| ||||||| |||||||||| ||||| |||||||||||||||||    
T  26459486 aacccacttgggttggcctagtggta-ttggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 26459411  T

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Target: chr7; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 45709785 - 45709709
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||| ||||||||||||||||||| || |||| ||| |||||||||||||| |||||||||||||||||||||||    
T  45709785 aaacccatttgggttggcctagtggta-ttagcttgggatctgagagtgtgctcctcctcgaggtctcaggttcgatt 45709709  T

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Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 598 - 668
Target Start/End: Complemental strand, 42836077 - 42836008
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggt 668  Q
    |||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||| ||| |||||||    
T  42836077 aacccacttgggttggcctagtggta-ttggcttgggacctgggagtgtgctcttcctcaaggcctcaggt 42836008  T

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Target: chr7; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 43215183 - 43215259
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||  |||||||||| ||||| |||||||||||||||||    
T  43215183 aaacccacttgggttggtctagtggta-ttggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgatt 43215259  T

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Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 20335907 - 20335832
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||| |||| |||| ||||||| |||| || |||||||||| |||||||||||||||||||||||    
T  20335907 aacccacttgggttggtctagaggta-ttggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgatt 20335832  T

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Target: chr7; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 39631844 - 39631919
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||||| ||||||| ||||||| ||||  |||| ||||| |||||||||||||||||    
T  39631844 aacccacttgggttggcctagtggta-ttggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgatt 39631919  T

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Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 598 - 668
Target Start/End: Complemental strand, 18011426 - 18011356
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggt 668  Q
    |||||| ||||||||||||| |||||||||||||  ||||||||||||||||| |||  ||||||||||||    
T  18011426 aacccagttgggttggcctaatggtaattggcttgagacctgagagtgtgctcctccatgaggtctcaggt 18011356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 23552117 - 23552193
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||| | |||| ||| ||||||| |||||||||| ||||| |||||||| ||||||||    
T  23552117 aaacccacttgggttggcctagtgct-attgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgatt 23552193  T

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Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 22760863 - 22760938
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||| || |||||| ||| ||| ||||||| |||||||||| ||||| |||||||||||||||||    
T  22760863 aacccacttgggttggtctggtggta-ttgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 22760938  T

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Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 30442488 - 30442563
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||| |||||| |||||||| ||||||| |||| ||||| ||||| |||||| ||||||||||    
T  30442488 aacccacttgggttggcccagtggt-attggcttgggacctgggagtttgctcctcctcaaggtctgaggttcgatt 30442563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 48771938 - 48772013
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||| | |||||| ||||||| ||| ||| |||||||||| |||| ||||||||||||||||||    
T  48771938 aacccacttgggttggcttggtggta-ttggcttgggatctgggagtgtgctcctccttgaggtctcaggttcgatt 48772013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 603 - 674
Target Start/End: Complemental strand, 7499995 - 7499925
Alignment:
Q  603 acttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||| |||||||| || ||||||| |||||||||||| ||||| || ||||||||||||||||||||    
T  7499995 acttgggttagcctagtgata-ttggcttgggacctgagagtttgctcctcttcgaggtctcaggttcgatt 7499925  T

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Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 595 - 674
Target Start/End: Complemental strand, 17041091 - 17041013
Alignment:
Q  595 ataaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||| ||||||| | ||||||| ||| |||  ||||||||| ||||| |||||||||||||||||    
T  17041091 ataaacccacttgggttggtctagtggca-ttggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgatt 17041013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 665
Target Start/End: Complemental strand, 25021411 - 25021345
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctca 665  Q
    ||||||||||||||||||||||||| |||||||| ||||||| |||||||||| ||||| | ||||||    
T  25021411 aacccacttgggttggcctagtggt-attggcttgggacctgggagtgtgctcctcctcaaagtctca 25021345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 596 - 674
Target Start/End: Original strand, 14058251 - 14058328
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||| |||| |||||||| |||||| ||| ||| | |||||||||||||||| ||||| |||||||||||||||||    
T  14058251 taaacccgcttgagttggcctggtggta-ttgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgatt 14058328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 596 - 674
Target Start/End: Original strand, 14368279 - 14368356
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||| |||| |||||||| |||||| ||| ||| | |||||||||||||||| ||||| |||||||||||||||||    
T  14368279 taaacccgcttgagttggcctggtggta-ttgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgatt 14368356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 597 - 675
Target Start/End: Original strand, 30579334 - 30579411
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgattt 675  Q
    |||||||||||||||||||| |||||| |||||||  |||||| |||||| | | ||||| ||||||||||||||||||    
T  30579334 aaacccacttgggttggcctggtggta-ttggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattt 30579411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 598 - 675
Target Start/End: Original strand, 27776172 - 27776248
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgattt 675  Q
    ||||||||||||||||||| |||||| |  |||| |||| ||||||||||||| ||||||| ||||||||||| ||||    
T  27776172 aacccacttgggttggcctggtggta-tacgcttgggacttgagagtgtgctcctcctcgaagtctcaggttcaattt 27776248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 38374676 - 38374600
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||| | |||||  ||||||| |||||| ||||||||||| ||||| |||||| ||||||||||    
T  38374676 aaacccacttgggttggcgtggtggtg-ttggcttgggaccttagagtgtgctcctcctcaaggtcttaggttcgatt 38374600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 5273666 - 5273591
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||| |||||  ||||||| |||||| ||||||||||| ||||| |||||| ||||| ||||    
T  5273666 aacccacttgggttggcctggtggtg-ttggcttgggaccttagagtgtgctcctcctcaaggtcttaggtttgatt 5273591  T

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Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 26199509 - 26199584
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||| ||| ||| || | ||| ||||||||||||||    
T  26199509 aacccacttgagttggcctagtggta-ttggcttgggacctgagaatgtactcctctttgagatctcaggttcgatt 26199584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 599 - 675
Target Start/End: Original strand, 35513467 - 35513542
Alignment:
Q  599 acccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgattt 675  Q
    ||||| ||||||||||||||||||| ||| ||| |||| ||||||||||||| |||||||  ||||| |||||||||    
T  35513467 acccatttgggttggcctagtggtatttg-cttgggacttgagagtgtgctcctcctcgatatctcatgttcgattt 35513542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 39499795 - 39499720
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||||| |||||||| ||||||| ||||||| || || |  |||||||| ||||||||    
T  39499795 aacccacttgggttggcctagtggt-attggcttgggacctgtgagtgtgttcctctttaaggtctcatgttcgatt 39499720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 43590907 - 43590982
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| |||||||||||| |||||| ||||||| |||| || |||||||||| ||||| | |||||||||||||||    
T  43590907 aacccagttgggttggcctggtggta-ttggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgatt 43590982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 672
Target Start/End: Original strand, 7801180 - 7801253
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcga 672  Q
    ||||||||||| ||||||| |||||| ||| ||| ||||||| |||||||||| || || |||||||||||||||    
T  7801180 aacccacttggtttggcctggtggta-ttgacttgggacctgggagtgtgctcctcttcaaggtctcaggttcga 7801253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 2446307 - 2446383
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||| ||  |||| |||||||| |||| || |||||||||| |||||||| ||||| ||||||||    
T  2446307 aaacccacttgggttggtctgatggt-attggcttgggacttgggagtgtgctcctcctcgagatctcaagttcgatt 2446383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 601 - 674
Target Start/End: Complemental strand, 15905746 - 15905675
Alignment:
Q  601 ccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||| | |||| ||||||| ||||||| |||||||||| ||||  |||||||||||||||||    
T  15905746 ccacttgggttggcctggcggta-ttggcttgggacctgggagtgtgctcctcctt-aggtctcaggttcgatt 15905675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 625 - 674
Target Start/End: Original strand, 22035424 - 22035473
Alignment:
Q  625 ttggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||| |||||||||||||||||| ||||||||| | |||||||||||    
T  22035424 ttggcttgggacctgagagtgtgctcctcctcgaggacccaggttcgatt 22035473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 675
Target Start/End: Original strand, 24513797 - 24513873
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgattt 675  Q
    ||||||||||||||||||||||||| ||||||||  ||  || |||||| ||  |||| |||||||||||||||||||    
T  24513797 aacccacttgggttggcctagtggt-attggcttgagatttgggagtgtacttctccttgaggtctcaggttcgattt 24513873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 675
Target Start/End: Original strand, 25590611 - 25590687
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgattt 675  Q
    ||||||||||||||| |||  ||||| |||||||  || ||| |||||||||| ||||||||||||| ||||||||||    
T  25590611 aacccacttgggttgacctgttggta-ttggcttgagatctgggagtgtgctcctcctcgaggtctcgggttcgattt 25590687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 674
Target Start/End: Original strand, 48079653 - 48079718
Alignment:
Q  609 gttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||| ||||||||||||| ||||||| | ||||| || | |||||||||||||||| ||||    
T  48079653 gttggcctactggtaattggcttgggacctgggtgtgtggtcctgctcgaggtctcaggtttgatt 48079718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 17113795 - 17113870
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||| ||||||||| || |||||||| | ||||| |||||||||  ||||| |||||||| ||||||||    
T  17113795 aacccacttggggtggcctagttgt-attggcttagaacctgggagtgtgcttctcctcaaggtctcaagttcgatt 17113870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 18363696 - 18363771
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||||| || |||||  ||  || |||||||||| ||||| |||||||||||| ||||    
T  18363696 aacccacttgggttggcctagtggt-ataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtttgatt 18363771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 670
Target Start/End: Original strand, 19553454 - 19553524
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    ||||| ||||||||||||| ||||| |||||| ||||||||| |||||||||| ||||| |||||| ||||||    
T  19553454 aacccgcttgggttggcctggtggt-attggc-ttggacctgggagtgtgctcctcctcaaggtcttaggttc 19553524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 23301678 - 23301603
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||| ||||| |||| ||| |||| || |||||||||| |||| ||||||||| ||| ||||    
T  23301678 aacccacttgggttggcctggtggt-attgacttgggacttgggagtgtgctcctccttgaggtctcaagtttgatt 23301603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 597 - 673
Target Start/End: Original strand, 23945860 - 23945935
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgat 673  Q
    |||||||||||||||| |||| ||||| ||| ||| | |||||||| ||||||| || | |||||||||||||||||    
T  23945860 aaacccacttgggttgacctaatggta-ttgacttagaacctgagaatgtgctcctcattgaggtctcaggttcgat 23945935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 31835192 - 31835267
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||| |||||  ||||||| ||  ||  |||||||||| ||||| |||||||||||||||||    
T  31835192 aacccacttgggttggcctggtggtg-ttggcttgggtgcttggagtgtgctcctcctcaaggtctcaggttcgatt 31835267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 33869521 - 33869446
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||| || ||||||||  ||||||  ||||||||| | ||| ||||||| |||||||||    
T  33869521 aacccacttgggttggcctagtagt-attggcttgagacctggaagtgtgctccttctcaaggtctctggttcgatt 33869446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 665
Target Start/End: Complemental strand, 3280561 - 3280495
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctca 665  Q
    ||||||||||||||| | | |||||| ||||||| ||||| |||||||||||| ||||| ||||||||    
T  3280561 aacccacttgggttgacatggtggta-ttggcttgggacccgagagtgtgctcctcctcaaggtctca 3280495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 669
Target Start/End: Complemental strand, 5579310 - 5579240
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggtt 669  Q
    ||||||||||||||| ||| |||||  ||||||| ||||||  |||||||||| ||||| ||||||||||||    
T  5579310 aacccacttgggttgacctggtggtg-ttggcttgggaccttggagtgtgctcctcctcaaggtctcaggtt 5579240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 41487361 - 41487434
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||| ||||| |||||||| |||| || |||||| |   ||||| |||||||||||||||||    
T  41487361 aaacccacttgggttggcctggtggt-attggcttgggacttgggagtgttc---tcctcaaggtctcaggttcgatt 41487434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 601 - 655
Target Start/End: Complemental strand, 45976996 - 45976943
Alignment:
Q  601 ccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcct 655  Q
    |||||||||||||||||||||| ||||||||  |||||| |||||||||| ||||    
T  45976996 ccacttgggttggcctagtggt-attggcttgtgacctgggagtgtgctcctcct 45976943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 605 - 674
Target Start/End: Complemental strand, 37085618 - 37085550
Alignment:
Q  605 ttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||| | |||||| ||||||| |||  || |||||||||| |||||||||| ||||||||||||    
T  37085618 ttgggttggcatggtggta-ttggcttgggatttgggagtgtgctcatcctcgaggtttcaggttcgatt 37085550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 42711957 - 42712033
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||| ||||||||||||| ||||||| ||| |||| | || || |||||||||| ||||| |||||||| ||||||||    
T  42711957 aaactcacttgggttggcttagtggt-attagcttggtacatgggagtgtgctcctcctcaaggtctcatgttcgatt 42712033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 2962460 - 2962534
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||| |||| ||||||||| |||| || | ||||| |||||||||| ||||| || ||||||||||||||    
T  2962460 aacccacttgg-ttggtctagtggta-ttggtttggaacctgtgagtgtgctcctcctcaagatctcaggttcgatt 2962534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 650
Target Start/End: Complemental strand, 25956368 - 25956317
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctc 650  Q
    |||||| |||||||||||||||||| |||||||| ||||||  ||||||||||    
T  25956368 aacccatttgggttggcctagtggt-attggcttgggaccttggagtgtgctc 25956317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 603 - 671
Target Start/End: Complemental strand, 41519335 - 41519268
Alignment:
Q  603 acttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcg 671  Q
    ||||||||||||||||||||| ||| ||| |||  |  |||||||||| ||||| ||||||||||||||    
T  41519335 acttgggttggcctagtggta-ttgacttgggatttaggagtgtgctcctcctcaaggtctcaggttcg 41519268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 650
Target Start/End: Original strand, 45559200 - 45559251
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctc 650  Q
    ||||||||||||||||||||||||| |||||||| | ||||  ||||||||||    
T  45559200 aacccacttgggttggcctagtggt-attggcttggaaccttggagtgtgctc 45559251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 5e-21; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 37109427 - 37109352
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||||| ||||||| ||||||| |||||||||| ||||| |||||||||||||||||    
T  37109427 aacccacttgggttggcctagtggta-ttggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 37109352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 37274536 - 37274460
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||| ||||||||||| ||||||| |||||||||| ||||| |||||| ||||||||||    
T  37274536 aacccacttgggttggcctagtcgtaattggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgatt 37274460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 2622475 - 2622396
Alignment:
Q  598 aacccacttgggttggcctagtggta---attggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||||||   |||||||| ||||||| |||||||||| ||||| | |||||||||||||||    
T  2622475 aacccacttgggttggcctagtggtattaattggcttgggacctgggagtgtgctcctcctccatgtctcaggttcgatt 2622396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 598 - 675
Target Start/End: Original strand, 46545711 - 46545787
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgattt 675  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||||| || |||||| ||||||||    
T  46545711 aacccacttgggttggcctagtggta-ttggcttgagacctgagagtgtgctcctcctcaagatctcagattcgattt 46545787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 19238653 - 19238578
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||| |||||| ||||||| |||| || |||||||||| ||||||||||||| |||||||||    
T  19238653 aacccacttgggttggcctggtggta-ttggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgatt 19238578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 55427276 - 55427201
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||| |||||| ||||||| ||||||| |||| ||||| | |||||||||||||||||||||    
T  55427276 aacccacttgggttggcctggtggta-ttggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgatt 55427201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 596 - 674
Target Start/End: Complemental strand, 19680866 - 19680789
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||| |||||||||||||| || |||| |||| || |||||||||||||||| |||||| ||||||||||    
T  19680866 taaacccacttggattggcctagtggta-ttcgcttgggacttgggagtgtgctcttcctcaaggtcttaggttcgatt 19680789  T

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Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 7949531 - 7949455
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||| |||||||| |||| ||||||| ||||||  |||||||||| ||||| |||||||||||||||||    
T  7949531 aaacccacttgggctggcctagcggta-ttggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgatt 7949455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 605 - 674
Target Start/End: Complemental strand, 49576963 - 49576895
Alignment:
Q  605 ttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||| |||||| |||||||||||| || |||||||||| ||||| |||||||||||||||||    
T  49576963 ttgggttggcctggtggta-ttggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgatt 49576895  T

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Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 39509070 - 39509145
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||| ||  ||||||| ||||| ||| ||| |||||||||| |||||||||||||||||||||||    
T  39509070 aacccacttgggttggtctcatggtaat-ggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgatt 39509145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 47044717 - 47044792
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||| ||||||| |||||| ||| ||| ||| |||||||| ||||| |||||||||||||||||||||||    
T  47044717 aacccacttggattggcctggtggta-ttgacttgggatctgagagtttgctcctcctcgaggtctcaggttcgatt 47044792  T

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Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 601 - 674
Target Start/End: Complemental strand, 7292871 - 7292799
Alignment:
Q  601 ccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||| ||||||||| ||||||| | ||||| |||||||||| ||||| | |||||||||||||||    
T  7292871 ccacttgggttggtctagtggta-ttggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgatt 7292799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 37720291 - 37720215
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||| ||| || ||||||| ||||||| |||||||| | ||||| ||||| |||||||||||    
T  37720291 aaacccacttgggttggcctggtgtta-ttggcttgggacctgggagtgtgcccctcctcaaggtcccaggttcgatt 37720215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 650
Target Start/End: Complemental strand, 1730565 - 1730514
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctc 650  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  1730565 aacccacttgggttgacctagtggta-ttggcttgggacctgagagtgtgctc 1730514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 595 - 674
Target Start/End: Complemental strand, 2185112 - 2185033
Alignment:
Q  595 ataaacccactt-gggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||| ||||||||||||||||||| ||||| | ||||| |||||||||| | ||| | |||||||||||||||    
T  2185112 ataaacccacttcgggttggcctagtggtaat-ggcttggaacctgggagtgtgctccttctcaaagtctcaggttcgatt 2185033  T

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Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 31759734 - 31759659
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||  |||||||| |||||||| |||| || |||||||||| ||||| ||||||||| |||||||    
T  31759734 aacccacttgggttgatctagtggt-attggcttgggacttgggagtgtgctcctcctcaaggtctcagattcgatt 31759659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 595 - 674
Target Start/End: Complemental strand, 21660223 - 21660145
Alignment:
Q  595 ataaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||| ||||||||||| || |||||| ||| |||  || ||| ||||||||||||||||||||||||| ||||||||    
T  21660223 ataaaccaacttgggttggtctggtggta-ttgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgatt 21660145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 595 - 674
Target Start/End: Complemental strand, 21668987 - 21668909
Alignment:
Q  595 ataaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||| ||||||||||| || |||||| ||| |||  || ||| ||||||||||||||||||||||||| ||||||||    
T  21668987 ataaaccaacttgggttggtctggtggta-ttgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgatt 21668909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 603 - 674
Target Start/End: Complemental strand, 26489946 - 26489876
Alignment:
Q  603 acttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| ||| ||| |||||| ||| ||||||||||||||||||||||||||||||| |||||  |||||||    
T  26489946 acttggattgacctggtggta-ttgactttggacctgagagtgtgctcttcctcgagatctcaacttcgatt 26489876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 672
Target Start/End: Complemental strand, 9241101 - 9241028
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcga 672  Q
    ||||||||||||||||||| ||||| |||||||| ||| |||  ||||||||| | |||||||||| ||||||||    
T  9241101 aacccacttgggttggcctggtggt-attggcttgggatctggtagtgtgctcctgctcgaggtctgaggttcga 9241028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 624 - 674
Target Start/End: Original strand, 23377981 - 23378031
Alignment:
Q  624 attggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||| ||||||| |||||||||| ||||| |||||||||||||||||    
T  23377981 attggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 23378031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 613 - 674
Target Start/End: Original strand, 38869783 - 38869843
Alignment:
Q  613 gcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||| ||||||| ||| ||| |||||||||| ||||| |||||||||||||||||    
T  38869783 gcctagtggta-ttggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 38869843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 49225507 - 49225431
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||| || |||||  |||||||  | ||||||||||||||||||||||| |||||  ||||||||    
T  49225507 aaacccacttgggttggtctggtggtg-ttggcttaaggcctgagagtgtgctcttcctcgatgtctcgtgttcgatt 49225431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 51250599 - 51250523
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||| ||||| |||||||| ||| ||| ||||||||||  |||| || ||||| ||||||||    
T  51250599 aaacccacttgggttggcctggtggt-attggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgatt 51250523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 8030280 - 8030205
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||| ||| ||||||||| || ||||| |||| || |||||||||| ||||| |||||||| ||||||||    
T  8030280 aacccacttggattgccctagtggt-ataggcttgggacttgggagtgtgctcctcctcaaggtctcaagttcgatt 8030205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 19229283 - 19229209
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| |||||||||||| |||||| ||||| | |||| | ||| ||||||| |||||||||||||||||||||||    
T  19229283 aacccatttgggttggcctggtggta-ttggcctgggactt-agaatgtgctcctcctcgaggtctcaggttcgatt 19229209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 31826609 - 31826684
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||| ||||||||| || ||||| |||  || |||||||||| ||||| |||||||| ||||||||    
T  31826609 aacccacttgggttgccctagtggt-ataggcttgggatttgcgagtgtgctcctcctcaaggtctcaagttcgatt 31826684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 596 - 671
Target Start/End: Original strand, 24827823 - 24827897
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcg 671  Q
    ||||||||||| |||||| |  |||||| ||| ||| ||||||| ||||| |||| ||||||||||||||||||||    
T  24827823 taaacccactttggttggtccggtggta-ttgacttgggacctgggagtgcgctcctcctcgaggtctcaggttcg 24827897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 597 - 648
Target Start/End: Complemental strand, 27965587 - 27965537
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgc 648  Q
    |||||||||||||||||||||||||| |||||||| ||| ||| ||||||||    
T  27965587 aaacccacttgggttggcctagtggt-attggcttgggatctgggagtgtgc 27965537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 624 - 674
Target Start/End: Complemental strand, 11592204 - 11592154
Alignment:
Q  624 attggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||| ||| |||||||||||||||||| ||||| |||||| ||||||||||    
T  11592204 attgccttgggacctgagagtgtgctcctcctccaggtcttaggttcgatt 11592154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 12798683 - 12798759
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||| || ||||||| |||| ||  || ||| |||||||||  |||||||||| ||||||||||||    
T  12798683 aaacccacttgggttgaccgagtggta-ttggtttgagatctgggagtgtgctgctcctcgaggtttcaggttcgatt 12798759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 598 - 671
Target Start/End: Original strand, 17618281 - 17618353
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcg 671  Q
    ||||||||||||  ||| | |||||| |||||||  |||||| |||||||||| |||||||||||||| |||||    
T  17618281 aacccacttgggccggcttggtggta-ttggcttgagacctgggagtgtgctcctcctcgaggtctcatgttcg 17618353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 641 - 674
Target Start/End: Complemental strand, 30938253 - 30938220
Alignment:
Q  641 gagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||| |||||||||||||||||||||||    
T  30938253 gagtgtgctcctcctcgaggtctcaggttcgatt 30938220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 601 - 650
Target Start/End: Original strand, 41683752 - 41683800
Alignment:
Q  601 ccacttgggttggcctagtggtaattggctttggacctgagagtgtgctc 650  Q
    |||||||||||| ||||||||| |||||||| | ||||||||||||||||    
T  41683752 ccacttgggttgacctagtggt-attggcttggaacctgagagtgtgctc 41683800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 9937037 - 9936962
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||| ||||||||||||||||||||| | | |||  ||| || |||||||||| ||||||| || ||||||||||||    
T  9937037 aacctacttgggttggcctagtggta-tcgacttgagacttgggagtgtgctcctcctcgaagtttcaggttcgatt 9936962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 602 - 670
Target Start/End: Original strand, 13901746 - 13901813
Alignment:
Q  602 cacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    |||||||||||| |||||||| ||||||||  |||||| ||||||| || |||| ||||||||| ||||    
T  13901746 cacttgggttggtctagtggt-attggcttgagacctgggagtgtgttcctccttgaggtctcaagttc 13901813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 28635696 - 28635771
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||| ||| ||||| | || ||| ||| ||| |||||||||| |||| ||||||| ||||||||||    
T  28635696 aacccacttgggttgtcctggtggt-actgacttgggatctgggagtgtgctcctcctggaggtcttaggttcgatt 28635771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 3e-19; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 33549103 - 33549179
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||| || |||||| ||||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  33549103 aaacccacttgggttggtctggtggta-ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 33549179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 12188380 - 12188304
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||||| |||||||| ||||||| |||||||||| ||||| |||| ||| ||||||||    
T  12188380 aaacccacttgggttggcctagtggt-attggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgatt 12188304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 596 - 669
Target Start/End: Complemental strand, 31623069 - 31622997
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggtt 669  Q
    |||||||||||||||||| |  |||||| ||||||| ||||||| |||||||||| ||||||||||||||||||    
T  31623069 taaacccacttgggttggtccggtggta-ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggtt 31622997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 596 - 674
Target Start/End: Complemental strand, 10338252 - 10338175
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||| ||||||||||||| | |||||| ||||||| ||||||  |||||||||| ||||| |||||||||||||||||    
T  10338252 taaactcacttgggttggcatggtggta-ttggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcgatt 10338175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 596 - 674
Target Start/End: Complemental strand, 12234585 - 12234508
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||| ||||||||| |||||| ||| ||| ||||||| ||||||||||   |||||||||||||||||||||    
T  12234585 taaacccacttaggttggcctggtggta-ttgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgatt 12234508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 30127400 - 30127475
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||| || |||||| ||||||| ||  ||| |||||||||| || ||||||||||||||||||||    
T  30127400 aacccacttgggttggtctggtggta-ttggcttggggtctgggagtgtgctcctcttcgaggtctcaggttcgatt 30127475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 604 - 674
Target Start/End: Original strand, 34444809 - 34444878
Alignment:
Q  604 cttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||| |||||| ||| ||| |||||| ||||||||||| ||| | |||||||||||||||||    
T  34444809 cttgggttggcctggtggta-ttgacttgggaccttagagtgtgctcctccccaaggtctcaggttcgatt 34444878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 634 - 674
Target Start/End: Original strand, 3858742 - 3858782
Alignment:
Q  634 gacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||| |||| ||||||||||||||||||||||||||    
T  3858742 gacctgagaatgtgttcttcctcgaggtctcaggttcgatt 3858782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 14557962 - 14558037
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||| || |||||  ||||||| |||||||  ||||||||| |||||  ||||||||||||||||    
T  14557962 aacccacttgggttggtctggtggtg-ttggcttgggacctggaagtgtgctcctcctccgggtctcaggttcgatt 14558037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 21418470 - 21418545
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| |||||||||||| ||||| |||||||| |||| || |||||||||| ||||| | |||||| ||||||||    
T  21418470 aacccagttgggttggcctggtggt-attggcttgggacttgggagtgtgctcctcctccatgtctcaagttcgatt 21418545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 596 - 674
Target Start/End: Original strand, 13330085 - 13330162
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||| ||||||||| |||| ||||| || || ||||  |||| ||||| ||||||||| |||||||    
T  13330085 taaacccacttgggttgacctagtggt-attgactttgaacttgggagtaagctcctcctcaaggtctcagattcgatt 13330162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 624 - 670
Target Start/End: Complemental strand, 21943479 - 21943433
Alignment:
Q  624 attggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    |||| ||| ||||||||||||||| ||||||||||||||| ||||||    
T  21943479 attgacttgggacctgagagtgtgttcttcctcgaggtctaaggttc 21943433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 14278186 - 14278112
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||| ||||||||||| |||   |||||||||||||||| ||||| |||| ||||  |||||||||||| ||||    
T  14278186 aacccacatgggttggcctggtgt--attggctttggacctgggagtgcgctcctccttaaggtctcaggtttgatt 14278112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 597 - 653
Target Start/End: Complemental strand, 22748 - 22693
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttc 653  Q
    ||||||||||||||||| ||||||||  ||||||| ||||||  |||||||||||||    
T  22748 aaacccacttgggttgggctagtggt-tttggcttgggaccttggagtgtgctcttc 22693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 602 - 674
Target Start/End: Complemental strand, 6776679 - 6776608
Alignment:
Q  602 cacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||| ||||| |||||||| ||| ||| | |||||||| ||||||| |||||| ||| ||||    
T  6776679 cacttgggttggcctggtggt-attggcttgggatctgggggtgtgctcctcctcgatgtctcaagtttgatt 6776608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 15399 - 15324
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||| || |||||| ||||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  15399 aacccacttgggttggtctggtggta-ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 15324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 7e-17; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 14285160 - 14285236
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||| ||||| ||||||||| | ||||| |||||||||| ||||| |||||||||||||||||    
T  14285160 aaacccacttgggttggccgagtgg-aattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgatt 14285236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 25627057 - 25627132
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||||| ||||||| | || || |||||||||| ||||| |||||||||||||||||    
T  25627057 aacccacttgggttggcctagtggta-ttggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgatt 25627132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 595 - 674
Target Start/End: Complemental strand, 30109387 - 30109309
Alignment:
Q  595 ataaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||| | |||||| |||||||  |||||| |||||||||| |||| ||||||||||||||||||    
T  30109387 ataaacccacttgggttggcttggtggta-ttggcttgtgacctgggagtgtgctcctccttgaggtctcaggttcgatt 30109309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 595 - 670
Target Start/End: Complemental strand, 30883277 - 30883203
Alignment:
Q  595 ataaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||| |||||||||| ||||| |||||||| ||||    
T  30883277 ataaacccacttgggttggtctagtggt-attggcttgggacctgggagtgtgctcctcctcaaggtctcaagttc 30883203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 675
Target Start/End: Complemental strand, 21549213 - 21549137
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgattt 675  Q
    ||||||||||||||||||||||||| |||||||| ||||||| |||||||||| ||||  | |||||| |||||||||    
T  21549213 aacccacttgggttggcctagtggt-attggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattt 21549137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 34984805 - 34984881
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||| |||||||| |||||||| | ||||| |||||||||| ||||| |||||| ||||||||||    
T  34984805 aaacccacttgggttggtctagtggt-attggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgatt 34984881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 598 - 670
Target Start/End: Complemental strand, 892550 - 892479
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    |||||| ||||||||||||||||||| ||||||| |||||| ||||||| ||| ||||| |||||||||||||    
T  892550 aacccatttgggttggcctagtggta-ttggcttgggacctcagagtgtactcctcctcaaggtctcaggttc 892479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 16773807 - 16773882
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||| ||||| || |||||| ||| ||| ||||||| |||||||||| |||||||||||||||||||||||    
T  16773807 aacccacttgagttggtctggtggta-ttgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 16773882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 21589288 - 21589363
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||| |||||| ||||||| ||||||| |||| ||||  ||||||| |||||||||||||||    
T  21589288 aacccacttgggttggcctggtggta-ttggcttgggacctgggagtctgctactcctcgatgtctcaggttcgatt 21589363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 29075781 - 29075856
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||| |||||||||| |||||||| ||| ||| |||||||||| |||||||| ||||| ||||||||    
T  29075781 aacccacttgggtttgcctagtggt-attggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgatt 29075856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 596 - 675
Target Start/End: Original strand, 16436616 - 16436693
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgattt 675  Q
    ||||| ||||||||||||||||||||| |||||||| |||| || |||||||||| ||||| |||||||| |||||||||    
T  16436616 taaactcacttgggttggcctagtggt-attggcttgggacttg-gagtgtgctcctcctcaaggtctcatgttcgattt 16436693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 7918545 - 7918470
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||||| |||||||| | ||||| |||||  ||| ||||| |||||| ||||||||||    
T  7918545 aacccacttgggttggcctagtggt-attggcttggaacctgggagtgcactcctcctcaaggtcttaggttcgatt 7918470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 595 - 674
Target Start/End: Complemental strand, 87502 - 87424
Alignment:
Q  595 ataaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||| ||||||||||||||| |||| ||| | | ||| |||||||||| ||||| |||||||||||| ||||    
T  87502 ataaacccacttcggttggcctagtggt-attgccttggaatctgggagtgtgctcctcctcaaggtctcaggtttgatt 87424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 598 - 676
Target Start/End: Complemental strand, 5390926 - 5390851
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatttg 676  Q
    |||||| ||||||||||||||||||| ||||||| || | || |||||  ||| |||||||||||||||||||||||||    
T  5390926 aacccatttgggttggcctagtggta-ttggcttggggcttgggagtg--ctcctcctcgaggtctcaggttcgatttg 5390851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 655
Target Start/End: Complemental strand, 43230852 - 43230794
Alignment:
Q  598 aacccacttgggttggcctagtggta-attggctttggacctgagagtgtgctcttcct 655  Q
    |||||||||||||||||||||||||| |||||||| ||  |||||||||||||| ||||    
T  43230852 aacccacttgggttggcctagtggtatattggcttgggttctgagagtgtgctcctcct 43230794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 674
Target Start/End: Original strand, 22737081 - 22737157
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||| |||||||| |||||||| |||| ||  ||||||||| ||| | | |||||||||||||||    
T  22737081 aaacccacttgggttggtctagtggt-attggcttgggacttggaagtgtgctcctccccaatgtctcaggttcgatt 22737157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 26078128 - 26078052
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||||||||| ||||| || |||| || |||| ||||  || || |||||||||||||||||    
T  26078128 aaacccacttgggttggcctagtggt-attggtttgggacttgggagtatgcttctcttcaaggtctcaggttcgatt 26078052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 650
Target Start/End: Original strand, 26598523 - 26598575
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctc 650  Q
    |||||||||||| ||||||||||||| |||||||| ||| ||||||||||||||    
T  26598523 aaacccacttggattggcctagtggt-attggcttgggatctgagagtgtgctc 26598575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 17028340 - 17028265
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||| |||||| ||| |||| || |||| || |||||||||| ||||| |||||||||||| ||||    
T  17028340 aacccacttgggttgacctagttgta-ttgggttgggacttgggagtgtgctcctcctcaaggtctcaggtttgatt 17028265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 596 - 670
Target Start/End: Complemental strand, 43241760 - 43241687
Alignment:
Q  596 taaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    ||||| |||||||||||| ||||||||| ||| ||| ||| ||  |||||||| |||||| ||||||||||||||    
T  43241760 taaactcacttgggttggtctagtggta-ttgacttgggatcttggagtgtgcccttccttgaggtctcaggttc 43241687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 669
Target Start/End: Complemental strand, 4793139 - 4793094
Alignment:
Q  624 attggctttggacctgagagtgtgctcttcctcgaggtctcaggtt 669  Q
    ||||| || ||||||| |||||||||| ||||||||||||||||||    
T  4793139 attggtttgggacctgggagtgtgctcctcctcgaggtctcaggtt 4793094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 22020939 - 22020863
Alignment:
Q  597 aaacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| ||||||||||| ||||||| ||| |||| ||| ||| |||||||||| |||| || ||||||| |||||||    
T  22020939 aaaccctcttgggttggcatagtggt-attagcttgggatctgggagtgtgctcctccttgaagtctcagattcgatt 22020863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 3252365 - 3252290
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||||||||||||| |||| |||  ||| || |||||  |||||||||  | ||||||||||||||    
T  3252365 aacccacttgggttggcctagtggt-attgacttgagacttgggagtgcactcttcctcaggctctcaggttcgatt 3252290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 666
Target Start/End: Complemental strand, 14495881 - 14495814
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcag 666  Q
    |||||| ||||||||| || |||||| ||| ||| ||| ||| |||||||||| |||||||||||||||    
T  14495881 aacccatttgggttggtctggtggta-ttgacttgggatctgggagtgtgctcctcctcgaggtctcag 14495814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 598 - 670
Target Start/End: Complemental strand, 41709 - 41638
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    |||||||||||||||||||||||||| |||||||  || |||||||| ||||| |||||||||||||||||||    
T  41709 aacccacttgggttggcctagtggta-ttggcttgagatctgagagtatgctcctcctcgaggtctcaggttc 41638  T

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Target: scaffold0002 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 601 - 670
Target Start/End: Complemental strand, 95044 - 94976
Alignment:
Q  601 ccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttc 670  Q
    ||||||||||||||||||||||| ||||||| | ||||| |||||||||| ||||| |||||||||||||    
T  95044 ccacttgggttggcctagtggta-ttggcttggaacctgggagtgtgctcctcctcaaggtctcaggttc 94976  T

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Target: scaffold0299 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 604 - 674
Target Start/End: Original strand, 11534 - 11603
Alignment:
Q  604 cttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| |||||| |||||| ||||||| ||| ||| |||||||||| |||||||||||||||||||||||    
T  11534 cttgggatggcctggtggta-ttggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgatt 11603  T

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Target: scaffold0180 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 674
Target Start/End: Complemental strand, 20027 - 19963
Alignment:
Q  609 gttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||||||||||||| ||||||| | ||||| |||| ||||| ||||| |||||||||||||||||    
T  20027 gttggcctagtggta-ttggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgatt 19963  T

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Target: scaffold0291 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 674
Target Start/End: Complemental strand, 2546 - 2471
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| ||||||||| |  |||||| |||| |||||| ||| |||||||||| ||||| |||||||||||||||||    
T  2546 aacccatttgggttggtccggtggta-ttggttttggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 2471  T

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Target: scaffold0122 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 605 - 673
Target Start/End: Complemental strand, 6988 - 6921
Alignment:
Q  605 ttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgat 673  Q
    ||||||||||||||||||| ||||||| ||||  | |||||||||| ||||| | ||||||||||||||    
T  6988 ttgggttggcctagtggta-ttggcttgggactggggagtgtgctcctcctcaaagtctcaggttcgat 6921  T

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Target: scaffold1367 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 604 - 674
Target Start/End: Complemental strand, 910 - 841
Alignment:
Q  604 cttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||| |||||| |||||| ||||||| ||| ||| || ||||||| ||||||| |||||||||||||||    
T  910 cttggggtggcctggtggta-ttggcttgggatctgggaatgtgctcctcctcgaagtctcaggttcgatt 841  T

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Target: scaffold0211 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 674
Target Start/End: Original strand, 24053 - 24128
Alignment:
Q  598 aacccacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    |||||||||||||||||||| |||| |||| ||| |||| |  |||||||||| || |||| || ||||||||||||    
T  24053 aacccacttgggttggcctaatggt-attgacttgggacttaggagtgtgctcctcttcgaagtgtcaggttcgatt 24128  T

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Target: scaffold0194 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 602 - 674
Target Start/End: Complemental strand, 13118 - 13047
Alignment:
Q  602 cacttgggttggcctagtggtaattggctttggacctgagagtgtgctcttcctcgaggtctcaggttcgatt 674  Q
    ||||| ||||||| | |||||| |||||||  || ||| |||||||||| ||||| |||||||||||||||||    
T  13118 cacttcggttggcttggtggta-ttggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgatt 13047  T

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