View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7698_high_14 (Length: 240)
Name: NF7698_high_14
Description: NF7698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7698_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 46 - 224
Target Start/End: Original strand, 29071420 - 29071598
Alignment:
| Q |
46 |
aaagctaacatgaaacaaaccaatatggagaaaaatttgattgataaaactagctcagttctatcaccaaccactaatgatacaacacttctcccctcat |
145 |
Q |
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| T |
29071420 |
aaagctaacatgaaacaaaccaatatggagaaaaatttgattgataaaactagctcagttctatcaccaaacactaacgatacaacacttcttccctcat |
29071519 |
T |
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| Q |
146 |
ttctactactcattaacacagcaattagagaacttagcattattgctgttgatgccaaaagggttgatgccattatatt |
224 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29071520 |
ttctactactcattaacacagcaattagagaacttagcattattgctgttgatgccaaaagggttgatgccattatatt |
29071598 |
T |
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