View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7699_high_18 (Length: 348)
Name: NF7699_high_18
Description: NF7699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7699_high_18 |
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Alignment Details
Target: chr5 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 69 - 337
Target Start/End: Complemental strand, 2635759 - 2635491
Alignment:
| Q |
69 |
tgagtcaagagaattgttcaaatcctcttgaactgtttcaatataattgaaagggtaattaggatcataagagactatgtttgaacttgaatgtgtgtgg |
168 |
Q |
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| T |
2635759 |
tgagtcaagagaattgttcaaatcctcttgaactgtttcaatataattgaaagggtaattaggatcataagagactatgtttgaacttgaatgtgtgtgg |
2635660 |
T |
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| Q |
169 |
aaagaaatatcaatagtatagatatcactatcagcagacattgaaacagaattcaaaattttattgaactcctcttgatacactacaattgaagttgggg |
268 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
2635659 |
aaagaaatatcaatagtatagatatcactatcagcagacattgaaacagaattcaaaattttgttgaactcctcttgatacactacaattgaagttgggg |
2635560 |
T |
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| Q |
269 |
aggtgtgatttatatataggaaagggtggattagcaagccaattccaaactaattactagctccttctt |
337 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
2635559 |
aggtgtgatttatatataggaaagggtggaatagcaagccaattccaaactaattactagctccttctt |
2635491 |
T |
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