View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7699_low_22 (Length: 373)
Name: NF7699_low_22
Description: NF7699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7699_low_22 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 259; Significance: 1e-144; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 355
Target Start/End: Original strand, 12930692 - 12931044
Alignment:
| Q |
1 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
12930692 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaataaaagta |
12930791 |
T |
|
| Q |
101 |
ggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930792 |
ggtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
12930887 |
T |
|
| Q |
201 |
tttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca--nnnnnnnngctaccgctgcgctgcaagatccaatctct |
298 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
12930888 |
tttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtctct |
12930987 |
T |
|
| Q |
299 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaagtg |
355 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930988 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaagtg |
12931044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 1 - 351
Target Start/End: Original strand, 12935438 - 12935786
Alignment:
| Q |
1 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| |
|
|
| T |
12935438 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagagtaaaagta |
12935537 |
T |
|
| Q |
101 |
ggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935538 |
ggtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
12935633 |
T |
|
| Q |
201 |
tttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca--nnnnnnnngctaccgctgcgctgcaagatccaatctct |
298 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| |
|
|
| T |
12935634 |
tttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtttct |
12935733 |
T |
|
| Q |
299 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
351 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935734 |
tttgaattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
12935786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 26505055 - 26504985
Alignment:
| Q |
146 |
agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttt |
216 |
Q |
| |
|
||||||| || |||||||||||||||| |||| |||||| |||||||||| ||||||||| | |||||||| |
|
|
| T |
26505055 |
agagagttgaaagaatattgtaatattttttattatagttgaatattttttggagtttgtactgtggtttt |
26504985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 148 - 260
Target Start/End: Original strand, 15588948 - 15589060
Alignment:
| Q |
148 |
agagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgttaa |
247 |
Q |
| |
|
|||||||||| ||| |||||||||| ||| ||| |||| ||||||||| ||||||||| | || |||||| |||| || ||||||||||| || ||| |
|
|
| T |
15588948 |
agagtggagaaaatgttgtaatattgtttgataaagtgaaatattttttagagtttgtcacttgatttttctctcattaatagagggtttttcaaaataa |
15589047 |
T |
|
| Q |
248 |
atattggtgttca |
260 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
15589048 |
atattgatgttca |
15589060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 26504895 - 26504850
Alignment:
| Q |
298 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcga |
343 |
Q |
| |
|
|||||||||||| ||||||||||||||||| | |||| |||||||| |
|
|
| T |
26504895 |
ttttggattttgaaattttaatttacacttccattaaactcgtcga |
26504850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 259; Significance: 1e-144; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 357
Target Start/End: Original strand, 14178707 - 14179062
Alignment:
| Q |
1 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
14178707 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagta |
14178806 |
T |
|
| Q |
101 |
ggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178807 |
ggtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
14178902 |
T |
|
| Q |
201 |
tttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctc |
297 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
14178903 |
tttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcattttttttattgctaccgctgcgctgcaagatccagtctc |
14179002 |
T |
|
| Q |
298 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaagtgat |
357 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14179003 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaactgat |
14179062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 355
Target Start/End: Original strand, 14173953 - 14174306
Alignment:
| Q |
1 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
14173953 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagta |
14174052 |
T |
|
| Q |
101 |
ggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14174053 |
ggtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
14174148 |
T |
|
| Q |
201 |
tttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctc |
297 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
14174149 |
tttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcattttttttatcactaccgctgcgctgcaagatccagtctc |
14174248 |
T |
|
| Q |
298 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaagtg |
355 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14174249 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaagtg |
14174306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 355
Target Start/End: Complemental strand, 28611917 - 28611564
Alignment:
| Q |
1 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
28611917 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagta |
28611818 |
T |
|
| Q |
101 |
ggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611817 |
ggtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
28611722 |
T |
|
| Q |
201 |
tttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctc |
297 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
28611721 |
tttgtcccgtggtttttccctcggtattagagggtttttcacgttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccagtctc |
28611622 |
T |
|
| Q |
298 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaagtg |
355 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611621 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaagtg |
28611564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 352
Target Start/End: Complemental strand, 28607155 - 28606805
Alignment:
| Q |
1 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
28607155 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagta |
28607056 |
T |
|
| Q |
101 |
ggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28607055 |
ggtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
28606960 |
T |
|
| Q |
201 |
tttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctc |
297 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||| |||| |
|
|
| T |
28606959 |
tttgtcccgtggtttttccctcggtattagagggtttttcacgttaaatattggtgttaattttttttatcgctaccgctgcgctgcaagatccagtctc |
28606860 |
T |
|
| Q |
298 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaa |
352 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28606859 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaa |
28606805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 351
Target Start/End: Original strand, 44161602 - 44161949
Alignment:
| Q |
1 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
44161602 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagta |
44161701 |
T |
|
| Q |
101 |
ggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
200 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44161702 |
ggtcttacgggaaacactatattgtatctct----tgtgtgtgtaagagagtggagaga--attgtaatattctttaatatagtggaatatttttcggag |
44161795 |
T |
|
| Q |
201 |
tttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctc |
297 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
44161796 |
tttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccaatctc |
44161895 |
T |
|
| Q |
298 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
351 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44161896 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
44161949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 351
Target Start/End: Original strand, 11104485 - 11104829
Alignment:
| Q |
1 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagta |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||| ||| |
|
|
| T |
11104485 |
agtgttgagtaaatccagagagtgtaggaaaaatacaccgggtggatatcatctctataacttctaggtgttataaaataatagcatttgaataggagtg |
11104584 |
T |
|
| Q |
101 |
ggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
11104585 |
ggtctcacgggaaacactatattgtatctct-----ttgtgtgtaagagagtggagagaatattgtaatattcttagatatggtggaatatttttcggag |
11104679 |
T |
|
| Q |
201 |
tttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnngctaccgctgcgctgcaagatccaatctcttt |
300 |
Q |
| |
|
|||||||||||| ||| ||||| ||||||||| ||||| | |||||||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
11104680 |
tttgtcccgtgg-tttaccctcgatattagaggattttctatgttaaatattggtgttcatttttatcgctacagctgcgctgcaagatccaatctcttt |
11104778 |
T |
|
| Q |
301 |
tggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
351 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11104779 |
tggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
11104829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 47 - 352
Target Start/End: Complemental strand, 48827000 - 48826701
Alignment:
| Q |
47 |
tatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnna |
146 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||| | |
|
|
| T |
48827000 |
tatcatctctataacttctaggtgctataaaataatagcattcaaataggagtgaatctcacgggaaacactatattgtatctcttgtgtgtgta----a |
48826905 |
T |
|
| Q |
147 |
gagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgtta |
246 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| |||||||||||| |
|
|
| T |
48826904 |
gagagcgaagagaatattgtaatattctttaatatagtggaatatttttcggag-ttgtcccgtgatttttccctcggtattagaggattttccacgtta |
48826806 |
T |
|
| Q |
247 |
aatattggtgttc-annnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagc |
345 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||| | |
|
|
| T |
48826805 |
aatattggtgttctttttctatcgctaccgctgcgctgcaagatccaatctc--ttgaattttgaaattttaatttacaattgcgttaagctcgtcgatc |
48826708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 154 - 324
Target Start/End: Complemental strand, 48708256 - 48708086
Alignment:
| Q |
154 |
gagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattg |
253 |
Q |
| |
|
||||||||||||||||||| ||||||||| || ||||||||| |||||||||| ||||||||||| || ||||||| || ||||| || ||||||||||| |
|
|
| T |
48708256 |
gagagaatattgtaatattttttaatataatgaaatattttttggagtttgtcacgtggtttttctcttagtattatagagtttttcatgttaaatattg |
48708157 |
T |
|
| Q |
254 |
gtgttcannnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttaca |
324 |
Q |
| |
|
|| || | || ||| ||||| || ||||| |||| |||||| ||||||||||||||||||||| |
|
|
| T |
48708156 |
gtatttaattttatcgccaccactgcgttgtaagattcaatttcttttatattttggaattttaatttaca |
48708086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 239
Target Start/End: Complemental strand, 24726381 - 24726288
Alignment:
| Q |
146 |
agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttc |
239 |
Q |
| |
|
||||| ||||||||||||| | || |||||||||||| ||||||||||||| ||||||||| ||||| |||||||| ||||||| ||||||| |
|
|
| T |
24726381 |
agagaatggagagaatattattatgttctttaatataatggaatatttttcagagtttgtctcgtggcttttcccttgatattagatggttttc |
24726288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 351
Target Start/End: Original strand, 34907155 - 34907503
Alignment:
| Q |
1 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
34907155 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaataaaagta |
34907254 |
T |
|
| Q |
101 |
ggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907255 |
ggtctcacgggaaacactatattgtatctct----tgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
34907350 |
T |
|
| Q |
201 |
tttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca--nnnnnnnngctaccgctgcgctgcaagatccaatctct |
298 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
34907351 |
tttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtctct |
34907450 |
T |
|
| Q |
299 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
351 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907451 |
tttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
34907503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 351
Target Start/End: Complemental strand, 37040775 - 37040426
Alignment:
| Q |
1 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
37040775 |
agtgttgagtaaatccagagagtgtgggaaaaatacatcgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagta |
37040676 |
T |
|
| Q |
101 |
ggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37040675 |
ggtctcacggaaaacactatattgtatctct----tgtgtgtgtgagagagtggagaaaatattgtaatattctttaatatagtggaatatttttcggag |
37040580 |
T |
|
| Q |
201 |
tttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctc |
297 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |
|
|
| T |
37040579 |
tttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccagtctt |
37040480 |
T |
|
| Q |
298 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
351 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37040479 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
37040426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 355
Target Start/End: Original strand, 15290248 - 15290598
Alignment:
| Q |
1 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagta |
100 |
Q |
| |
|
|||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||| ||| |
|
|
| T |
15290248 |
agtgttgactaaatccagaaagtgtgg-aaaaatacaccgggtgggtatcatctctataacttctaggtgctgaaata--atagcattcgaataggagtg |
15290344 |
T |
|
| Q |
101 |
ggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| || ||| |||| |
|
|
| T |
15290345 |
ggtctcacgg-aaacactatattgtatctcttgtgtgtgta----agagagtggagagaatattgtaatattcttaaatatagtggaaaatcttttggag |
15290439 |
T |
|
| Q |
201 |
tttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca---nnnnnnnngctaccgctgcgctgcaagatccaatctc |
297 |
Q |
| |
|
||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
15290440 |
tttgtcccgtggtttatacctcggtattagagggttttccacgttaaatattggtgttcattttttttatcgctaaggctgcgctgcaagatccaatctc |
15290539 |
T |
|
| Q |
298 |
-ttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaagtg |
355 |
Q |
| |
|
|||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
15290540 |
tttttggattttgaaattttaatttacaattgcgttaagctcgtcgagcccaacaagtg |
15290598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 46 - 351
Target Start/End: Original strand, 12099060 - 12099361
Alignment:
| Q |
46 |
gtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnn |
145 |
Q |
| |
|
|||||||||||||||||| |||||| ||||| |||||| |||| |||||| ||| ||||||| ||||||| ||||||| ||||| |
|
|
| T |
12099060 |
gtatcatctctataacttttaggtgttataaaataatatcatttgaataggagtgagtctcactagaaacacaatattgtgtctcttgtgcgtgta---- |
12099155 |
T |
|
| Q |
146 |
agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgtt |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||| || ||||||||||||| ||||| |
|
|
| T |
12099156 |
agagagtggagagaatattgtaatattctttaatatagttgaaattttttcggagtttgtcccttggtttttccttcgtcattagagggtttttcacgta |
12099255 |
T |
|
| Q |
246 |
aaatattggtgttcannnnnnnngctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagc |
345 |
Q |
| |
|
|||||||| | |||| |||| || || ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
12099256 |
aaatattgcttttcatttttatcgctatcggtgagctgcaagatcatatctcttttggattttggaattttaatttacactcgcgttaaactcgtcgagc |
12099355 |
T |
|
| Q |
346 |
ccaaca |
351 |
Q |
| |
|
|||||| |
|
|
| T |
12099356 |
ccaaca |
12099361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 12082031 - 12082227
Alignment:
| Q |
1 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagta |
100 |
Q |
| |
|
||||||| ||||||||||| | | |||||||||| | ||||| ||||| |||||||||||||||||| ||||||| |||||| |||| |||||| || |
|
|
| T |
12082031 |
agtgttgggtaaatccagaaaaag-gggaaaaatatatcgggtaggtattatctctataacttctaggcgctataaaataataacatttgaataggagcg |
12082129 |
T |
|
| Q |
101 |
ggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
200 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
12082130 |
agtctcattagaaacactatattgtatctct----tttccgtgtaagagagtggagaaaatattgtaatattc-ttaatatagtggaatattttttggag |
12082224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 269 - 351
Target Start/End: Original strand, 12084669 - 12084751
Alignment:
| Q |
269 |
gctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
351 |
Q |
| |
|
||||||| |||||| ||||||||||| ||| |||||||||| ||||||||||||| || | ||||||||||| |||||||||| |
|
|
| T |
12084669 |
gctaccgttgcgctacaagatccaatgtctattggattttgaaattttaatttaccctcgtgttaagctcgttgagcccaaca |
12084751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 258
Target Start/End: Complemental strand, 2757418 - 2757307
Alignment:
| Q |
146 |
agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgtt |
245 |
Q |
| |
|
||||||||||||||||| || |||||| || |||||||||||||| ||||| | |||||| | |||||||||| | || |||| |||| ||| || || |
|
|
| T |
2757418 |
agagagtggagagaatagtgcaatatttttaaatatagtggaata-ttttcaaaatttgtctcatggtttttccttaagcattaaaggggttttcatatt |
2757320 |
T |
|
| Q |
246 |
aaatattggtgtt |
258 |
Q |
| |
|
||||||||||||| |
|
|
| T |
2757319 |
aaatattggtgtt |
2757307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 357
Target Start/End: Complemental strand, 2757273 - 2757207
Alignment:
| Q |
291 |
caatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaagtgat |
357 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||| ||||||||| || | ||||||||||| |
|
|
| T |
2757273 |
caatttcttttgaattttggaattttaatttacacttgtaataagctcgttgaacacaacaagtgat |
2757207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 351
Target Start/End: Complemental strand, 29107224 - 29106878
Alignment:
| Q |
1 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtggg-tatcatctctataacttctaggtgctataatataatagcattagaatagaagt |
99 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
29107224 |
agtgttgagtaaatccagagagtgtgggaaaaatacattgggtggggtatcatctttataacttctaggtgctaaaaaataatagcattagaatagaagt |
29107125 |
T |
|
| Q |
100 |
aggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcgga |
199 |
Q |
| |
|
||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29107124 |
aggtctcacgggaaacactat-ttgtatctcttgtgtgtgta----agagagtggagagaatattgtaatattctttaatatagtggaatatttttcgga |
29107030 |
T |
|
| Q |
200 |
gtttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnngctaccgctgcgctgcaagatccaatctctt |
299 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |
|
|
| T |
29107029 |
gtttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcatttttaacgctaccgctgcgctgcaagatccaatctttt |
29106930 |
T |
|
| Q |
300 |
ttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
351 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||| ||||||| |
|
|
| T |
29106929 |
ttggattttggaattttaatttacacttgcattaagctcctcgatcccaaca |
29106878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 352
Target Start/End: Complemental strand, 42911338 - 42910992
Alignment:
| Q |
1 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagta |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
42911338 |
agtgttgagtaaatccagagagtgtggaaaaaatacactgggtgggtatcatctctataacttcttggtgctataaaataatagcattagaatagaagta |
42911239 |
T |
|
| Q |
101 |
ggtctcacgggaaacactatattgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggag |
200 |
Q |
| |
|
||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
42911238 |
ggtctcaagggaaacactatattgtatcttt----tgtgtgtgtgagagagtggagagaatattgtaatattcttaaatatagtggaata-ttttcggag |
42911144 |
T |
|
| Q |
201 |
tttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnngctaccgctgcgctgcaagatccaatctcttt |
300 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| | | |||||||||||||||||| ||||||||| |
|
|
| T |
42911143 |
tttgtcccgtggtttttccctcggtattagagggttttccatgttaaatattggtgttcatttttatcgttgccgctgcgctgcaagatctaatctcttt |
42911044 |
T |
|
| Q |
301 |
tggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaa |
352 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
42911043 |
tggattttaaaattttaatttccacttgcgttaagctcgtcgagcccaacaa |
42910992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 271 - 355
Target Start/End: Complemental strand, 38994779 - 38994695
Alignment:
| Q |
271 |
taccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaagtg |
355 |
Q |
| |
|
||||||||| |||||||||||||| | ||||| |||||||||||||||||||||| || ||||| ||||| ||||||||||||| |
|
|
| T |
38994779 |
taccgctgcactgcaagatccaattttgtttgggttttggaattttaatttacactagcattaagatcgtcaagcccaacaagtg |
38994695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 38997320 - 38997230
Alignment:
| Q |
169 |
tattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttc |
259 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||||||||| ||||||| || ||||||||||||||| |||| |||||||| ||||| |
|
|
| T |
38997320 |
tattctttaatataatggattattttttggagtttgtcccgtagtttttcgttcgatattagagggttttcgacgtaaaatattgctgttc |
38997230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 354
Target Start/End: Complemental strand, 38997193 - 38997135
Alignment:
| Q |
296 |
tcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaagt |
354 |
Q |
| |
|
||||||||||| |||||||||||||||||| || |||||| | |||| |||||||||| |
|
|
| T |
38997193 |
tcttttggattctggaattttaatttacacccgcattaagcccttcgaacccaacaagt |
38997135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 175; Significance: 4e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 8539199 - 8539549
Alignment:
| Q |
1 |
agtgttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagta |
100 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| ||| ||||||||| | |||||| ||| |
|
|
| T |
8539199 |
agtgttcagtaaattcagagagtgtgggaaaaatacatcggatgggtatcatctctataacttttaggtgctgtaaaataatagcaatcgaataggagtg |
8539298 |
T |
|
| Q |
101 |
ggtctcacgggaaacactata---ttgtatctctnnnnnnnnnnnnnnagagagtggagagaatattgtaatattctttaatatagtggaatatttttcg |
197 |
Q |
| |
|
|||||||||| |||||||||| |||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
8539299 |
ggtctcacgg-aaacactataatattgtatctcttgtgtgtgta----agagagtggagataatattgtaatattcttaaatatagtggaatatctttcg |
8539393 |
T |
|
| Q |
198 |
gagtttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttca-nnnnnnnngctaccgctgcgctgcaagatccaatct |
296 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||| |
|
|
| T |
8539394 |
gagtttgtcccgtgatttttccctcggtattagagggttttccacgttaaatattgatgttcattttttattgttaccgctgcgctgcaagatccaatct |
8539493 |
T |
|
| Q |
297 |
cttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaa |
352 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8539494 |
cttttagaatttggaattttaatttacacttgcgttaagctcgtcgagcccaacaa |
8539549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 51302181 - 51302306
Alignment:
| Q |
5 |
ttgagtaaatccagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataatataatagcattagaatagaagtaggtc |
104 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||| |||||| ||| |||| |
|
|
| T |
51302181 |
ttgagtaaatccagagagtgtggataaaatacaccgggtgggaatcatctctataacttctaggtgctataaaacaattgcattcgaataggagtgggtc |
51302280 |
T |
|
| Q |
105 |
tcacgggaaacactatattgtatctc |
130 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
51302281 |
tcacgggaaacactatattgtatctc |
51302306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 269 - 355
Target Start/End: Original strand, 51302937 - 51303023
Alignment:
| Q |
269 |
gctaccgctgcgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaagtg |
355 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
51302937 |
gctaccgctgcgctgcaagatccaatctgttttggattttgaaattttaatttacacttgcattaagctcgtcgatcccaacaagtg |
51303023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 51302308 - 51302344
Alignment:
| Q |
224 |
gtattagagggttttccacgttaaatattggtgttca |
260 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51302308 |
gtattagagggttttccacgttaaatattggtgttca |
51302344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 169 - 351
Target Start/End: Complemental strand, 2100379 - 2100199
Alignment:
| Q |
169 |
tattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcagtattagagggttttccacgttaaatattggtgttcannnnnnnn |
268 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| ||||||| |||| ||||| |||||||||||| |||||||||| |||||| |
|
|
| T |
2100379 |
tattctttaatatagtggaatatttttcggagtttgcccc---gtttttcgctcattattaaagggttttccaccttaaatattgatgttcaattttatc |
2100283 |
T |
|
| Q |
269 |
gctaccgctgcgctgcaaga-tccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
351 |
Q |
| |
|
|| || || ||||||| | || |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
2100282 |
attatcgttgtgctgcaaaattcaaatctcttatgaattttggaattttaatttacacttgtgttaagctcgtcgagcccaaca |
2100199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 176
Target Start/End: Complemental strand, 2100753 - 2100723
Alignment:
| Q |
146 |
agagagtggagagaatattgtaatattcttt |
176 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
2100753 |
agagagtggagagaatattgtaatattcttt |
2100723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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