View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7700_low_1 (Length: 493)

Name: NF7700_low_1
Description: NF7700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7700_low_1
NF7700_low_1
[»] chr4 (50 HSPs)
chr4 (21-307)||(36006741-36007040)
chr4 (308-492)||(10010809-10010992)
chr4 (308-492)||(10017950-10018133)
chr4 (308-492)||(38308014-38308197)
chr4 (306-492)||(48825998-48826183)
chr4 (308-492)||(40730379-40730562)
chr4 (330-492)||(47691600-47691761)
chr4 (330-492)||(48801178-48801339)
chr4 (308-492)||(8753729-8753911)
chr4 (308-492)||(16711743-16711926)
chr4 (339-492)||(38973613-38973765)
chr4 (308-492)||(9627486-9627669)
chr4 (339-492)||(20039596-20039748)
chr4 (309-492)||(7363477-7363658)
chr4 (306-492)||(41324355-41324534)
chr4 (330-492)||(8672761-8672922)
chr4 (330-492)||(41487471-41487627)
chr4 (308-412)||(52225665-52225769)
chr4 (307-412)||(48089812-48089917)
chr4 (316-477)||(48659328-48659488)
chr4 (308-412)||(37011005-37011108)
chr4 (316-477)||(29590427-29590587)
chr4 (389-492)||(32212267-32212369)
chr4 (316-477)||(17981255-17981415)
chr4 (308-396)||(11845391-11845479)
chr4 (421-477)||(46903849-46903905)
chr4 (425-492)||(11845325-11845392)
chr4 (433-492)||(14599106-14599165)
chr4 (446-492)||(52225608-52225654)
chr4 (421-477)||(12582211-12582267)
chr4 (339-492)||(23106324-23106477)
chr4 (446-492)||(37010948-37010994)
chr4 (316-368)||(517556-517608)
chr4 (316-368)||(36488779-36488831)
chr4 (444-492)||(40412763-40412811)
chr4 (446-492)||(48089755-48089801)
chr4 (424-477)||(3095470-3095523)
chr4 (433-482)||(20392876-20392925)
chr4 (433-474)||(42431716-42431757)
chr4 (428-477)||(49389551-49389600)
chr4 (306-374)||(4422058-4422126)
chr4 (307-407)||(31842845-31842945)
chr4 (421-473)||(33239747-33239799)
chr4 (316-368)||(50637244-50637296)
chr4 (428-469)||(29525224-29525265)
chr4 (421-466)||(34432956-34433001)
chr4 (451-492)||(39787625-39787666)
chr4 (316-368)||(3097928-3097980)
chr4 (421-477)||(4422172-4422228)
chr4 (336-412)||(35041797-35041873)
[»] chr7 (44 HSPs)
chr7 (308-492)||(2732290-2732473)
chr7 (308-492)||(11410521-11410704)
chr7 (308-492)||(1411463-1411646)
chr7 (303-492)||(41892118-41892306)
chr7 (308-477)||(15943075-15943243)
chr7 (352-492)||(48214107-48214246)
chr7 (308-471)||(34521206-34521368)
chr7 (330-492)||(31673560-31673721)
chr7 (306-492)||(18533305-18533485)
chr7 (339-492)||(8485849-8486002)
chr7 (308-412)||(14776203-14776307)
chr7 (308-412)||(3356960-3357064)
chr7 (381-492)||(37807031-37807141)
chr7 (316-477)||(12419110-12419269)
chr7 (310-477)||(43596131-43596297)
chr7 (317-474)||(10227867-10228023)
chr7 (421-477)||(27595593-27595649)
chr7 (421-477)||(31377477-31377533)
chr7 (308-412)||(41399731-41399834)
chr7 (316-477)||(13391062-13391222)
chr7 (421-477)||(2941080-2941136)
chr7 (421-477)||(41631523-41631579)
chr7 (426-477)||(23671107-23671158)
chr7 (446-492)||(3357075-3357121)
chr7 (446-492)||(14776146-14776192)
chr7 (446-492)||(41399674-41399720)
chr7 (421-474)||(21441922-21441975)
chr7 (336-477)||(41902794-41902934)
chr7 (339-412)||(44980613-44980686)
chr7 (421-477)||(21806612-21806668)
chr7 (433-492)||(4067978-4068037)
chr7 (446-492)||(36820872-36820918)
chr7 (316-466)||(44848024-44848173)
chr7 (433-474)||(26574155-26574196)
chr7 (424-477)||(32584933-32584986)
chr7 (424-477)||(45470317-45470370)
chr7 (421-477)||(5667188-5667244)
chr7 (421-492)||(35516444-35516520)
chr7 (421-477)||(46191624-46191680)
chr7 (316-374)||(31377373-31377431)
chr7 (316-408)||(23671170-23671262)
chr7 (316-412)||(24421919-24422015)
chr7 (444-492)||(32670288-32670336)
chr7 (307-363)||(37806988-37807044)
[»] chr3 (60 HSPs)
chr3 (308-492)||(40000722-40000905)
chr3 (308-492)||(39391050-39391233)
chr3 (308-492)||(1782627-1782810)
chr3 (304-492)||(33249408-33249595)
chr3 (308-492)||(20647738-20647921)
chr3 (308-492)||(28793648-28793831)
chr3 (308-492)||(47597027-47597210)
chr3 (330-492)||(34422609-34422770)
chr3 (329-492)||(55008112-55008274)
chr3 (330-492)||(52174748-52174909)
chr3 (330-492)||(54650463-54650624)
chr3 (339-492)||(25536867-25537019)
chr3 (339-492)||(40488988-40489140)
chr3 (308-477)||(34705267-34705435)
chr3 (329-492)||(46068007-46068169)
chr3 (308-492)||(33069377-33069549)
chr3 (308-412)||(19420962-19421066)
chr3 (304-412)||(24540998-24541106)
chr3 (316-482)||(26994712-26994877)
chr3 (386-492)||(40000476-40000581)
chr3 (339-492)||(47844526-47844683)
chr3 (308-412)||(29076864-29076968)
chr3 (308-474)||(43010194-43010360)
chr3 (306-412)||(13596159-13596265)
chr3 (339-412)||(34636368-34636441)
chr3 (333-412)||(53002180-53002259)
chr3 (316-482)||(39889329-39889494)
chr3 (424-492)||(41873497-41873565)
chr3 (330-477)||(41129679-41129825)
chr3 (437-492)||(53002269-53002324)
chr3 (330-412)||(33370432-33370514)
chr3 (421-477)||(4356980-4357036)
chr3 (445-492)||(39171383-39171430)
chr3 (308-466)||(4481649-4481806)
chr3 (316-477)||(25593629-25593789)
chr3 (444-492)||(34636450-34636498)
chr3 (421-477)||(35761465-35761521)
chr3 (372-492)||(46116481-46116600)
chr3 (308-412)||(46181876-46181980)
chr3 (330-477)||(24133778-24133924)
chr3 (330-477)||(46136320-46136466)
chr3 (451-493)||(13596276-13596318)
chr3 (446-492)||(19421077-19421123)
chr3 (446-492)||(29076979-29077025)
chr3 (316-466)||(51302369-51302518)
chr3 (308-477)||(9338218-9338386)
chr3 (447-492)||(18984175-18984220)
chr3 (447-492)||(24540946-24540991)
chr3 (303-374)||(4357082-4357153)
chr3 (422-477)||(31405876-31405931)
chr3 (352-482)||(24120235-24120364)
chr3 (446-492)||(33370525-33370571)
chr3 (424-477)||(45387599-45387652)
chr3 (421-473)||(42294221-42294273)
chr3 (422-477)||(41636396-41636451)
chr3 (334-404)||(28125766-28125836)
chr3 (421-471)||(50638595-50638645)
chr3 (331-377)||(53002082-53002128)
chr3 (421-466)||(26020319-26020364)
chr3 (372-412)||(39171439-39171479)
[»] chr6 (29 HSPs)
chr6 (303-492)||(3728993-3729181)
chr6 (308-492)||(4111325-4111508)
chr6 (308-492)||(13276560-13276743)
chr6 (308-492)||(28890849-28891032)
chr6 (305-492)||(5153313-5153499)
chr6 (307-492)||(3027225-3027409)
chr6 (308-492)||(12296865-12297050)
chr6 (339-492)||(27613306-27613458)
chr6 (307-412)||(8437592-8437697)
chr6 (351-492)||(31803057-31803197)
chr6 (302-477)||(1101182-1101356)
chr6 (357-477)||(3257163-3257282)
chr6 (339-492)||(1449797-1449936)
chr6 (330-412)||(24011953-24012035)
chr6 (330-473)||(34858150-34858292)
chr6 (316-473)||(32187244-32187400)
chr6 (433-492)||(24848996-24849055)
chr6 (421-475)||(4174176-4174230)
chr6 (424-477)||(17156339-17156392)
chr6 (451-492)||(24012046-24012087)
chr6 (339-410)||(479201-479272)
chr6 (421-477)||(9283866-9283922)
chr6 (316-379)||(11982476-11982539)
chr6 (453-492)||(14610588-14610627)
chr6 (308-379)||(24848888-24848959)
chr6 (446-492)||(8437530-8437576)
chr6 (428-477)||(13041651-13041700)
chr6 (451-492)||(23645943-23645984)
chr6 (316-368)||(13041759-13041811)
[»] scaffold0037 (1 HSPs)
scaffold0037 (308-492)||(81281-81464)
[»] chr8 (42 HSPs)
chr8 (308-492)||(36054584-36054767)
chr8 (303-492)||(36684667-36684855)
chr8 (308-492)||(11989029-11989212)
chr8 (308-492)||(7323132-7323315)
chr8 (308-477)||(26241267-26241435)
chr8 (330-492)||(12615142-12615298)
chr8 (307-492)||(10921067-10921250)
chr8 (303-492)||(33303719-33303911)
chr8 (316-412)||(23950296-23950392)
chr8 (307-412)||(32551593-32551698)
chr8 (316-477)||(38600783-38600943)
chr8 (308-492)||(31519144-31519317)
chr8 (316-410)||(35056187-35056281)
chr8 (306-477)||(16364937-16365107)
chr8 (381-477)||(16383888-16383983)
chr8 (339-411)||(10954370-10954442)
chr8 (339-411)||(10962375-10962447)
chr8 (381-490)||(30577079-30577187)
chr8 (316-466)||(24580449-24580598)
chr8 (316-477)||(14921374-14921534)
chr8 (316-477)||(32983157-32983317)
chr8 (444-492)||(23950401-23950449)
chr8 (444-492)||(32415327-32415375)
chr8 (444-492)||(32551536-32551584)
chr8 (318-410)||(40680359-40680451)
chr8 (330-477)||(8000038-8000184)
chr8 (422-473)||(41478390-41478441)
chr8 (424-466)||(41478642-41478684)
chr8 (421-466)||(7960518-7960563)
chr8 (308-369)||(26106378-26106439)
chr8 (308-377)||(36918609-36918678)
chr8 (433-477)||(23444507-23444551)
chr8 (421-477)||(44710188-44710244)
chr8 (423-466)||(39506596-39506639)
chr8 (427-477)||(44755621-44755671)
chr8 (451-492)||(36918705-36918746)
chr8 (444-480)||(10954456-10954492)
chr8 (444-480)||(10962461-10962497)
chr8 (421-469)||(12638097-12638145)
chr8 (307-363)||(16383970-16384026)
chr8 (316-368)||(44710085-44710137)
chr8 (316-368)||(44755552-44755604)
[»] chr1 (63 HSPs)
chr1 (308-492)||(39860403-39860586)
chr1 (308-492)||(52222725-52222908)
chr1 (316-492)||(8417235-8417410)
chr1 (307-492)||(6889450-6889634)
chr1 (307-492)||(6891296-6891480)
chr1 (330-492)||(44969049-44969210)
chr1 (339-492)||(46846789-46846941)
chr1 (306-492)||(17805811-17805991)
chr1 (308-477)||(19708929-19709097)
chr1 (302-477)||(33785188-33785362)
chr1 (339-492)||(13253275-13253426)
chr1 (340-492)||(50096983-50097134)
chr1 (330-492)||(31493383-31493544)
chr1 (308-412)||(34083969-34084073)
chr1 (339-492)||(6888939-6889090)
chr1 (306-492)||(2988654-2988834)
chr1 (316-477)||(42649992-42650152)
chr1 (308-412)||(18353088-18353192)
chr1 (308-412)||(24038241-24038345)
chr1 (307-477)||(10805016-10805185)
chr1 (304-477)||(10311986-10312158)
chr1 (316-482)||(6305032-6305197)
chr1 (422-492)||(45372725-45372795)
chr1 (427-492)||(3831588-3831653)
chr1 (316-477)||(13077302-13077462)
chr1 (308-412)||(13884595-13884700)
chr1 (316-477)||(39919612-39919772)
chr1 (336-412)||(18437128-18437204)
chr1 (336-412)||(18447985-18448061)
chr1 (336-412)||(18453078-18453154)
chr1 (330-477)||(42384222-42384368)
chr1 (339-477)||(47367454-47367590)
chr1 (339-412)||(7109603-7109676)
chr1 (316-477)||(12298142-12298302)
chr1 (316-477)||(15321854-15322014)
chr1 (330-477)||(27090777-27090923)
chr1 (433-492)||(32239252-32239311)
chr1 (446-492)||(7109546-7109592)
chr1 (446-492)||(18353208-18353254)
chr1 (316-477)||(18342566-18342726)
chr1 (330-472)||(34049968-34050111)
chr1 (421-477)||(29523022-29523078)
chr1 (421-477)||(38672088-38672144)
chr1 (433-492)||(31225525-31225584)
chr1 (316-474)||(15849821-15849978)
chr1 (316-477)||(5499916-5500076)
chr1 (339-395)||(3831542-3831598)
chr1 (421-477)||(5506857-5506913)
chr1 (421-477)||(17386266-17386322)
chr1 (308-412)||(32239308-32239412)
chr1 (304-410)||(19507053-19507159)
chr1 (316-410)||(44912605-44912699)
chr1 (424-477)||(23555861-23555914)
chr1 (433-477)||(16452509-16452553)
chr1 (433-477)||(16461661-16461705)
chr1 (445-492)||(34084083-34084130)
chr1 (458-492)||(24038373-24038407)
chr1 (453-490)||(18437243-18437280)
chr1 (453-490)||(18448100-18448137)
chr1 (453-490)||(18453193-18453230)
chr1 (424-477)||(26257505-26257558)
chr1 (307-394)||(45372786-45372870)
chr1 (421-477)||(5616606-5616662)
[»] chr5 (43 HSPs)
chr5 (308-492)||(4049382-4049565)
chr5 (308-492)||(31271374-31271557)
chr5 (308-492)||(42062247-42062430)
chr5 (308-471)||(6644119-6644281)
chr5 (311-493)||(4101180-4101363)
chr5 (318-412)||(12880469-12880563)
chr5 (330-492)||(42288448-42288604)
chr5 (308-412)||(7078990-7079094)
chr5 (308-412)||(7035162-7035266)
chr5 (308-412)||(9163428-9163532)
chr5 (421-492)||(491341-491412)
chr5 (308-477)||(18158378-18158546)
chr5 (308-396)||(491253-491341)
chr5 (316-477)||(10017771-10017931)
chr5 (316-477)||(14949480-14949640)
chr5 (308-477)||(40083983-40084151)
chr5 (444-492)||(7035275-7035323)
chr5 (308-412)||(10931618-10931722)
chr5 (446-492)||(7079105-7079151)
chr5 (339-477)||(34855346-34855483)
chr5 (305-492)||(12724873-12725054)
chr5 (421-476)||(13916727-13916782)
chr5 (446-492)||(32298587-32298633)
chr5 (316-410)||(38254701-38254795)
chr5 (447-492)||(10931729-10931774)
chr5 (424-477)||(18295292-18295345)
chr5 (433-482)||(28210262-28210311)
chr5 (306-466)||(27332464-27332623)
chr5 (424-471)||(14084419-14084466)
chr5 (446-492)||(12880579-12880625)
chr5 (421-477)||(3881027-3881083)
chr5 (433-473)||(12786375-12786415)
chr5 (316-368)||(15397565-15397617)
chr5 (421-477)||(27054453-27054509)
chr5 (424-475)||(15678135-15678186)
chr5 (426-477)||(17870002-17870053)
chr5 (421-463)||(858753-858795)
chr5 (308-410)||(11877462-11877564)
chr5 (305-367)||(12786475-12786537)
chr5 (433-482)||(370280-370329)
chr5 (307-368)||(18295183-18295244)
chr5 (330-379)||(32298666-32298714)
chr5 (433-477)||(17468053-17468097)
[»] chr2 (43 HSPs)
chr2 (308-492)||(12033766-12033948)
chr2 (308-492)||(21198077-21198260)
chr2 (308-492)||(34726266-34726449)
chr2 (339-492)||(29557446-29557598)
chr2 (340-492)||(38213428-38213579)
chr2 (308-477)||(40737800-40737968)
chr2 (359-492)||(18075722-18075854)
chr2 (308-412)||(13029126-13029230)
chr2 (308-412)||(32084134-32084238)
chr2 (433-492)||(43616406-43616465)
chr2 (308-396)||(36985416-36985504)
chr2 (330-412)||(5936791-5936873)
chr2 (316-477)||(2994999-2995159)
chr2 (308-412)||(7592563-7592662)
chr2 (336-412)||(43616333-43616409)
chr2 (316-410)||(2182741-2182835)
chr2 (339-477)||(25879702-25879839)
chr2 (308-410)||(26260288-26260390)
chr2 (307-477)||(35959328-35959497)
chr2 (444-492)||(5936734-5936782)
chr2 (421-477)||(6283475-6283531)
chr2 (316-408)||(31452906-31452998)
chr2 (316-476)||(44092765-44092924)
chr2 (316-474)||(6431524-6431681)
chr2 (336-477)||(2611305-2611445)
chr2 (311-412)||(17852771-17852871)
chr2 (339-492)||(39133259-39133416)
chr2 (339-412)||(43999653-43999726)
chr2 (422-482)||(1834297-1834357)
chr2 (314-410)||(6419979-6420075)
chr2 (421-477)||(29768401-29768457)
chr2 (421-477)||(42077061-42077117)
chr2 (446-492)||(13029069-13029115)
chr2 (421-474)||(29044210-29044263)
chr2 (307-394)||(6283331-6283418)
chr2 (317-368)||(26160427-26160478)
chr2 (446-492)||(36983226-36983272)
chr2 (436-477)||(7298953-7298994)
chr2 (425-466)||(15899673-15899714)
chr2 (444-493)||(17852708-17852757)
chr2 (451-492)||(32084082-32084123)
chr2 (316-368)||(29044113-29044165)
chr2 (308-368)||(38448096-38448156)
[»] scaffold0129 (1 HSPs)
scaffold0129 (308-492)||(40900-41083)
[»] scaffold0065 (1 HSPs)
scaffold0065 (308-492)||(39974-40158)
[»] scaffold0067 (1 HSPs)
scaffold0067 (308-492)||(14281-14463)
[»] scaffold0217 (1 HSPs)
scaffold0217 (368-492)||(15625-15750)
[»] scaffold0886 (1 HSPs)
scaffold0886 (339-466)||(1754-1880)
[»] scaffold0259 (1 HSPs)
scaffold0259 (433-491)||(24901-24959)
[»] scaffold0005 (1 HSPs)
scaffold0005 (433-492)||(218213-218272)
[»] scaffold1625 (2 HSPs)
scaffold1625 (329-412)||(1232-1315)
scaffold1625 (445-492)||(1325-1372)
[»] scaffold0422 (1 HSPs)
scaffold0422 (421-473)||(10719-10771)
[»] scaffold0275 (1 HSPs)
scaffold0275 (316-410)||(9159-9253)


Alignment Details
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 21 - 307
Target Start/End: Original strand, 36006741 - 36007040
Alignment:
Q  21 tactccacttatctttgctgattgcagtcgattatgattgtccaaatccc--gtgtcatgggtcgtaatcccctctgttttcaatcttattgtcaatggt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  36006741 tactccacttatctttgctgattgcagtcgattatgattgtccaaatcccctgtgtcatgggtcgtaatcccctctgttttcaatcttattgtcaatagt 36006840  T
Q  119 tgaaaatcatc----------gttgggatcacactttattcat-----tcgtaatattcggaacccttgcattatggtgaaaatttcaatatatagacct 203  Q
    |||||||||||          ||||||||||||||||||||||     |||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  36006841 tgaaaatcatcactttaagtcgttgggatcacactttattcatctggatcgtaatattcggaacccttacattatggtgaaaatttcaatatatagactt 36006940  T
Q  204 aattttgcatcgtgcatgcgcgccacatgtgccacttaagttggcttggcatgttttgaactatcagtatgcacgcgaacacatacacgtgtatcacaca 303  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    |||||||||||||||| |||||||||||    
T  36006941 aattttgcattgtgcatgcgcgccacatgtgccacctaagttggcttggcatgttttgaactatcagt----acgcgaacacatacacatgtatcacaca 36007036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 10010992 - 10010809
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| |||||||||||| |||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| |||||||||||  |||||||||    
T  10010992 tagggttgggaataggccaggtcaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggtctttcatag 10010893  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  10010892 gccta-ttattttggcctggcctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 10010809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 10018133 - 10017950
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| |||||||||||| |||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| |||||||||||  |||||||||    
T  10018133 tagggttgggaataggccaggtcaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggtctttcatag 10018034  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  10018033 gccta-ttattttggcctggcctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 10017950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 38308197 - 38308014
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||||||||||| |||||||| |||| ||||||||||| ||||||||||    
T  38308197 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggcctttcatag 38308098  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  38308097 gccta-ttattttggcctggcctggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagt 38308014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 306 - 492
Target Start/End: Original strand, 48825998 - 48826183
Alignment:
Q  306 aatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcat 405  Q
    ||||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  48825998 aatagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcat 48826097  T
Q  406 aggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||        ||||||||||| ||||||||||||||| | |||||||||||||||||||| |||||| ||||||||||||||    
T  48826098 aggccta-ttattttggcctggcctggcctatttaaaagtctagcctggcctgaaagcctatttataggcctacttactattaaagt 48826183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 40730562 - 40730379
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  40730562 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 40730463  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||||||| || | ||||||||||||||||||||||||||| ||||||||||||||    
T  40730462 gccta-ttattttggcctggcctggcctatttaaaagcctagcctggcctgaaagcctatttacaggcctacttactattaaagt 40730379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 330 - 492
Target Start/End: Original strand, 47691600 - 47691761
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||        |||||||||    
T  47691600 caggccagactttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggccta-ttattttggcctggcc 47691698  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    || |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  47691699 tggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 47691761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 330 - 492
Target Start/End: Complemental strand, 48801339 - 48801178
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||| || |||||||||| |||||| ||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||        ||||||| |    
T  48801339 caggccaggctttgataggcctgagcctggccaacgaaaaaatttgcaggcctgagcctggcctatgacctttcataggcctattttttt-ggcctggtc 48801241  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    || |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  48801240 tgtcctatttaaaagtctggtttggcctgaaagcctatttacaggcctacttactattaaagt 48801178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 8753911 - 8753729
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || ||||||||||  ||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  8753911 tagggttgggaataggccaggccaggccaggctttgataggcatgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 8753812  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        |||||| |||| |||||||||||||||| ||||||||||||||||| ||| |||||| ||||||||||||||    
T  8753811 gccta-tttttttggcctgacctggcctatttaaaagtctgatctggcctgaaagccta-ttataggcctacttactattaaagt 8753729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 492
Target Start/End: Original strand, 16711743 - 16711926
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| | |||||| |||  || ||||| ||||||||||||||||  ||||||||||||||||||||||| |||| ||||||||||| ||||||| ||    
T  16711743 tagggttggaaataggtcaggccaagctaggctttgataggtctgagtctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcacag 16711842  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||||| ||||||||||||||    
T  16711843 gccta-ttcttttggcctggcctggcctatttaaaagtctggcctgacctgaaaacctatttacaggcctacttactattaaagt 16711926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 339 - 492
Target Start/End: Original strand, 38973613 - 38973765
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatt 438  Q
    |||||||||| |||||| ||| ||||||||||||||||||| |||| ||||||||||| |||||||||||||||        |||||| |||| ||||||    
T  38973613 ctttgataggcctgagcctggactacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctattttttt-ggcctgacctggcctatt 38973711  T
Q  439 taaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  38973712 taaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 38973765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 492
Target Start/End: Original strand, 9627486 - 9627669
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| | |||||||||| |||||| || |||||||||| |||||| |||||||| ||| |||||||||| ||||  ||| |||||| ||||||||||    
T  9627486 tagggttggaaataggccaggtcaggccaggctttgataggcctgagcctggcctacaaaagaatttgcaggcctgagtctgacctatggcctttcatag 9627585  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        |||||| |||  ||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||    
T  9627586 gccta-tttttttggcctgccctagcctatttaaaagtctggcctgacctgaaagcctatttataggccttcttactattaaagt 9627669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 339 - 492
Target Start/End: Complemental strand, 20039748 - 20039596
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatt 438  Q
    |||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||        |||||||||||  |||||    
T  20039748 ctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggccta-tttttttggcctggcctggtctatt 20039650  T
Q  439 taaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||  ||  ||| ||||||||||||||||||||||| ||||||||||||||    
T  20039649 taaaagcatgccctgacctgaaagcctatttacaggcctacttactattaaagt 20039596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 309 - 492
Target Start/End: Complemental strand, 7363658 - 7363477
Alignment:
Q  309 agggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatagg 408  Q
    |||||| |||||||||||| ||| || || ||||||||| | ||||| |||||||||||||  |||||||| |||| ||||||||||| |||||||||||    
T  7363658 agggttgggaataggccaggtcatgccaggctttgatagct-tgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcatagg 7363560  T
Q  409 cctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||        |  |||||||| |||| |||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  7363559 cctattttttt-gatctggcctggcctacttaaaagtctggcctgacctgaaagcctatttacaggcctacttactattaaagt 7363477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 306 - 492
Target Start/End: Complemental strand, 41324534 - 41324355
Alignment:
Q  306 aatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcat 405  Q
    ||||||||| |||||||||     ||||| || |||||||||| |||||  ||||||||| ||||||||||||| ||||  |||||||||| ||||||||    
T  41324534 aatagggttgggaataggc-----caggccaggctttgataggcctgagtctggcctacg-aaaaatttgcaggcctgagtctggcctatggcctttcat 41324441  T
Q  406 aggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||        || |||| ||| ||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||    
T  41324440 aggccta-tttttttggtctggtctggcctatttaaaagtctggtctgacctgaaagcctatttacagggctacttactattaaagt 41324355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 330 - 492
Target Start/End: Original strand, 8672761 - 8672922
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||| || ||||||||||| ||||  | | |||||||||||||||||||||||||| ||||||||| |||||||||||||||         || ||| |    
T  8672761 caggccaggctttgataggtttgagtctagtctacgaaaaaatttgcaggtctgaacttggcctatggcctttcataggcctatttttttt-gcttggtc 8672859  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    || | ||||||||||||| | ||||||| ||||||||||||||||||| ||||||||||||||    
T  8672860 tggcttatttaaaagtctagcctggcctaaaagcctatttacaggcctacttactattaaagt 8672922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 330 - 492
Target Start/End: Original strand, 41487471 - 41487627
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||| || |||||||||| |||||| |||||||||||||  |||||||| |||| ||||||||||| |||||||||||||||            |  ||    
T  41487471 caggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcataggcctatttttt------taacc 41487564  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    || ||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||    
T  41487565 tgacctatttaaaagtctagcctggcctgaaagcctatttacaggcctacttactattaaagt 41487627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 308 - 412
Target Start/End: Complemental strand, 52225769 - 52225665
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| |||||||||||| |||||| |||||||||||||||||||  | | ||||||||||||||||||| |||| ||||||||||  ||||||||||    
T  52225769 tagggttgggaataggccaggtcaggccagactttgataggtctgagtctagtctacgaaaaaatttgcaggcctgagcctggcctatagcctttcatag 52225670  T
Q  408 gccta 412  Q
    |||||    
T  52225669 gccta 52225665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 307 - 412
Target Start/End: Complemental strand, 48089917 - 48089812
Alignment:
Q  307 atagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcata 406  Q
    |||||||| ||||||||||||  ||||  || |||||||||| |||||| ||||||||||||||||||||||| |||| |||||| |||| |||||||||    
T  48089917 atagggttgggaataggccaggccaggtcaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcatatggcctttcata 48089818  T
Q  407 ggccta 412  Q
    ||||||    
T  48089817 ggccta 48089812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 316 - 477
Target Start/End: Original strand, 48659328 - 48659488
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  |||||||| |||||||||| |||||| | |||||||||||||||| |||| |||| ||||||||||||||| |||||||||         
T  48659328 ggaataggccaggccaggctaggctttgataggcctgagcctagcctacgaaaaaatttacaggcctgagcctggcctatgacctatcataggcc-gttt 48659426  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         |||||| | || |||||||||||| |||| |||||||||||||||| ||||| ||||    
T  48659427 ttctaggcctgacttgacctatttaaaagcctggactggcctgaaagcctaattacaagcct 48659488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 412
Target Start/End: Complemental strand, 37011108 - 37011005
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||| ||  ||||| ||||||||||||| |||||| ||||||||||||||||||||||| ||| | |||||||||| ||||||||||    
T  37011108 tagggttgggaataggctaggccaggccagactttgataggcctgagcctggcctacgaaaaaatttgcaggcctg-agctggcctatggcctttcatag 37011010  T
Q  408 gccta 412  Q
    |||||    
T  37011009 gccta 37011005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 477
Target Start/End: Complemental strand, 29590587 - 29590427
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||| || |||||||||| |||||| |||||||||||| || |  || | |||| ||||||||||| ||| |||||||||         
T  29590587 ggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccg-ttt 29590489  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         ||||||||||| ||||||||||||||||| || ||||||||||||| ||||||||||    
T  29590488 ttttaggcctggcctgacctatttaaaagtctggactagcctgaaagcctacttacaggcct 29590427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 32212267 - 32212369
Alignment:
Q  389 ggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactatta 488  Q
    ||||||||||||||||||||||||        || |||||||  |||||||||||| |||||||||||||||||| |||| |||||||| ||||||||||    
T  32212267 ggcctatgacctttcataggcctattttctt-ggtctggcctaacctatttaaaagcctggtctggcctgaaagcttattcacaggcctacttactatta 32212365  T
Q  489 aagt 492  Q
    ||||    
T  32212366 aagt 32212369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 477
Target Start/End: Complemental strand, 17981415 - 17981255
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||| | ||||||||||||| |||||| |||||||||||| || |  || | |||| ||||||||||| ||| |||||||||         
T  17981415 ggaataggccaggccagaccagactttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccg-ttt 17981317  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         ||||||||||| |||||||||||| |||| |||||||||||||||| ||||| ||||    
T  17981316 ttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaagcct 17981255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 11845479 - 11845391
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatg 396  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||||||||||  |||||||| |||| |||||||||||    
T  11845479 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatg 11845391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 46903905 - 46903849
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||    
T  46903905 ggcctggcctgacctatttaaaagtctggactggcctgaaagcctacttacaggcct 46903849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 425 - 492
Target Start/End: Complemental strand, 11845392 - 11845325
Alignment:
Q  425 tggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||| ||||||||||||| ||| ||||| |||||||||||||| |||||| ||||||||||||||    
T  11845392 tggcctggcctatttaaaagtttggcctggcttgaaagcctatttaaaggcctacttactattaaagt 11845325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 433 - 492
Target Start/End: Original strand, 14599106 - 14599165
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||    
T  14599106 cctatttaaaagtctggcctggcctgaaagcctatttacaggcttatttactattaaagt 14599165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 52225654 - 52225608
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  52225654 ctggtctggcctgaaagcctatttacaggcctacttactattaaagt 52225608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 477
Target Start/End: Original strand, 12582211 - 12582267
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||||    
T  12582211 ggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcct 12582267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 492
Target Start/End: Complemental strand, 23106477 - 23106324
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta-nnnnnnnnggcctggcctgccctat 437  Q
    |||||||||| |||||  | ||||| ||||||||||||| | ||||  |||||||||| |||||||||||||||          | |||| |||  ||||    
T  23106477 ctttgataggcctgagtctagcctatgaaaaaatttgcaagcctgagtctggcctatggcctttcataggcctattttttttttgtctggtctg-gctat 23106379  T
Q  438 ttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||| ||||||| |||||||||||||||||| || | ||||||||||||||    
T  23106378 ttaaaagtttggtctgacctgaaagcctatttacaagcttacttactattaaagt 23106324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 37010994 - 37010948
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  37010994 ctggcctggcctgaaagcctatttacaggcctacttactattaaagt 37010948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 517556 - 517608
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaa 368  Q
    |||||||| ||| |||||| |||||||||||||||||||| ||||||||||||    
T  517556 ggaataggtcaggtcaggccagactttgataggtctgagcctggcctacgaaa 517608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 36488779 - 36488831
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaa 368  Q
    ||||||||||||  ||||| |||||||||||||||||||| ||||||||||||    
T  36488779 ggaataggccaggccaggccagactttgataggtctgagcctggcctacgaaa 36488831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 492
Target Start/End: Complemental strand, 40412811 - 40412763
Alignment:
Q  444 gtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||  |||||||||||||||||||||| ||||||||||||||    
T  40412811 gtctggtctgatctgaaagcctatttacaggcctacttactattaaagt 40412763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 48089801 - 48089755
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||| |||| |||||||||||||||||||||| ||||||||||||||    
T  48089801 ctggcctggtctgaaagcctatttacaggcctacttactattaaagt 48089755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 424 - 477
Target Start/End: Complemental strand, 3095523 - 3095470
Alignment:
Q  424 ctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||||  |||||||||||| |||| |||||||||||||||| ||||||||||    
T  3095523 ctggcctaacctatttaaaagcctggactggcctgaaagcctacttacaggcct 3095470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 482
Target Start/End: Complemental strand, 20392925 - 20392876
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacaggccttctta 482  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||| ||||    
T  20392925 cctatttaaaagtctggactggcctgaaagcctaattacatgcctactta 20392876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 474
Target Start/End: Complemental strand, 42431757 - 42431716
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacagg 474  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  42431757 cctatttaaaagtctggactggcctgaaagcctacttacagg 42431716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 428 - 477
Target Start/End: Original strand, 49389551 - 49389600
Alignment:
Q  428 cctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||| ||||||||||||||||| |||||||||||||||| ||||| ||||    
T  49389551 cctgacctatttaaaagtctggactggcctgaaagcctacttacaagcct 49389600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 374
Target Start/End: Original strand, 4422058 - 4422126
Alignment:
Q  306 aatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaattt 374  Q
    ||||||| | ||||||||||||  ||||| || |||||||||  |||||| ||||||||||||||||||    
T  4422058 aataggggtgggaataggccaggccaggccaggctttgatagacctgagcctggcctacgaaaaaattt 4422126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 407
Target Start/End: Original strand, 31842845 - 31842945
Alignment:
Q  307 atagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcata 406  Q
    |||||| | |||||| ||||| |||||| || |||||||||| |||||| |||||||||||| || |  || | |||| ||||||||||| ||| |||||    
T  31842845 ataggggtgggaataagccaggtcaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcata 31842944  T
Q  407 g 407  Q
    |    
T  31842945 g 31842945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 473
Target Start/End: Original strand, 33239747 - 33239799
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacag 473  Q
    ||||||||||| ||||||||||||  ||| |||||||||||||||| ||||||    
T  33239747 ggcctggcctggcctatttaaaagcttggactggcctgaaagcctacttacag 33239799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 50637296 - 50637244
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaa 368  Q
    ||||||||| || |||||| || |||||||||| |||||||||||||||||||    
T  50637296 ggaataggctaggtcaggccaggctttgataggcctgagcttggcctacgaaa 50637244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 469
Target Start/End: Original strand, 29525224 - 29525265
Alignment:
Q  428 cctgccctatttaaaagtctggtctggcctgaaagcctattt 469  Q
    |||| |||||||||||||||||  ||||||||||||||||||    
T  29525224 cctggcctatttaaaagtctggcttggcctgaaagcctattt 29525265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 466
Target Start/End: Complemental strand, 34433001 - 34432956
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagccta 466  Q
    ||||||||||| |||||| ||||  |||||||||||||||||||||    
T  34433001 ggcctggcctggcctattaaaaaacctggtctggcctgaaagccta 34432956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 492
Target Start/End: Complemental strand, 39787666 - 39787625
Alignment:
Q  451 ctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||| |||||||||||| || ||||||||||||||    
T  39787666 ctggcctgaaaacctatttacaggtctacttactattaaagt 39787625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 3097980 - 3097928
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaa 368  Q
    ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||    
T  3097980 ggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaa 3097928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 477
Target Start/End: Original strand, 4422172 - 4422228
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||  ||| ||||||||||||||||| |||||||| ||||||| ||| ||||||    
T  4422172 ggcctgatctgacctatttaaaagtctggactggcctgcaagcctacttataggcct 4422228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 412
Target Start/End: Complemental strand, 35041873 - 35041797
Alignment:
Q  336 agactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    ||||||||||||| |||||| |||||||| ||||||||| || | |||| | |||||| || ||| | |||||||||    
T  35041873 agactttgataggcctgagcctggcctacaaaaaaatttacaagcctgagcttggcctgtggcctattataggccta 35041797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 3e-49; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 308 - 492
Target Start/End: Original strand, 2732290 - 2732473
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||||||||||||||| |||| |||| ||||||||||| ||||||||||    
T  2732290 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttacaggcctgagcctggcctatggcctttcatag 2732389  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  2732390 gccta-ttattttggcctggcctggcctatttaaaagcctggtctggcctgaaagcctatttacaggcctacttactattaaagt 2732473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 308 - 492
Target Start/End: Original strand, 11410521 - 11410704
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||||||||||  |||||||| |||| ||||||||||| ||||||||||    
T  11410521 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcatag 11410620  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  11410621 gcctattatttt-ggcctggcctgacctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagt 11410704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 1411646 - 1411463
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| ||||||||||||||||||||| |||||||| |||| |||||||||||  |||||||||    
T  1411646 tagggttgggaataggccaggccaggccaggctttgataggcctgagcttggcctacgaaaaattttgcaggcctgagcctggcctatggtctttcatag 1411547  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||| |||  |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  1411546 gccta-tttttttggcctggtctggtctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagt 1411463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 303 - 492
Target Start/End: Original strand, 41892118 - 41892306
Alignment:
Q  303 acaaatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgaccttt 402  Q
    |||| ||||||| ||||||||||||  ||||| ||||||||||||| |||||| |||| |||||||||||||||| | |||| ||||||||||| |||||    
T  41892118 acaattagggttgggaataggccaggccaggccagactttgataggcctgagcctggcttacgaaaaaatttgcaagcctgagcctggcctatggccttt 41892217  T
Q  403 cataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||||          |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||    
T  41892218 cataggcct-tttttttttgcctggcctggcctatttaaaagtctggcctggcctgaaagcctatttgcaggcctacttactattaaagt 41892306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 308 - 477
Target Start/End: Complemental strand, 15943243 - 15943075
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||   |||||||| |||| ||||||||||| ||||||||||    
T  15943243 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcatag 15943144  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||        ||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||    
T  15943143 gccta-tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcct 15943075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 352 - 492
Target Start/End: Original strand, 48214107 - 48214246
Alignment:
Q  352 gagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtc 451  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||        ||||||||||| ||||||||||||||||  |    
T  48214107 gagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctattttttt-ggcctggcctggcctatttaaaagtctgccc 48214205  T
Q  452 tggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  48214206 tggcctgaaatcctatttacaggcctgcttactattaaagt 48214246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 308 - 471
Target Start/End: Complemental strand, 34521368 - 34521206
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| |||||||||||| |||||| || |||||||||| |||||| || |||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  34521368 tagggttgggaataggccaggtcaggccaggctttgataggcctgagcctgacctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 34521269  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttac 471  Q
    |||||        ||||||||||| |||||||||||| |||| ||| |||||||||||| ||||    
T  34521268 gccta-ttattttggcctggcctgacctatttaaaagcctggcctgacctgaaagcctacttac 34521206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 330 - 492
Target Start/End: Original strand, 31673560 - 31673721
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||||||||||||||||| |||||| || ||||||||||||||| ||||  ||| | | |||||||||||||||||||||||        | | || ||    
T  31673560 caggctagactttgataggcctgagcctgacctacgaaaaaatttacaggcttgagcttagcctatgacctttcataggcctattttttttgtc-tgacc 31673658  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    || ||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  31673659 tggcctatttaaaagtctggcctggcctgaaaacctatttacaggcctacttactattaaagt 31673721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 306 - 492
Target Start/End: Complemental strand, 18533485 - 18533305
Alignment:
Q  306 aatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcat 405  Q
    ||||||||| |||||||||     ||||| || |||||||||| |||||| ||||||||||||||||||||||  |||| ||| ||||||||||||||||    
T  18533485 aatagggttgggaataggc-----caggccaggctttgataggcctgagcctggcctacgaaaaaatttgcagacctgagcctagcctatgacctttcat 18533391  T
Q  406 aggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||        ||| ||| ||| ||||||||||||  |||||||||||||||||||||||||||| || || |||||||||||    
T  18533390 aggccta-tttttttggcttggtctgacctatttaaaagcatggtctggcctgaaagcctatttacaggtctactcactattaaagt 18533305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 339 - 492
Target Start/End: Complemental strand, 8486002 - 8485849
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatt 438  Q
    |||||||||| |||||| ||||||||||||||||||||||| || | ||| |||| |  ||||||||||| |||         |||||||||| || |||    
T  8486002 ctttgataggcctgagcctggcctacgaaaaaatttgcaggcctcagcctagcctgtagcctttcataggtctatttttttttgcctggcctgacccatt 8485903  T
Q  439 taaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||| |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  8485902 taaaagcctggtctgccctgaaagcctatttacaggcctacttactattaaagt 8485849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 308 - 412
Target Start/End: Complemental strand, 14776307 - 14776203
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  14776307 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 14776208  T
Q  408 gccta 412  Q
    |||||    
T  14776207 gccta 14776203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 308 - 412
Target Start/End: Original strand, 3356960 - 3357064
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||||||||| ||| |||| ||||||||||| ||||||||||    
T  3356960 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgaaggcctgagcctggcctatggcctttcatag 3357059  T
Q  408 gccta 412  Q
    |||||    
T  3357060 gccta 3357064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 381 - 492
Target Start/End: Original strand, 37807031 - 37807141
Alignment:
Q  381 ctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttct 480  Q
    |||| ||||||||||| |||||||||||||||        || |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  37807031 ctgagcctggcctatggcctttcataggcctattttttt-ggtctggtctgacctatttaaaaatctggtctggcctgaaagcctatttacaggcctact 37807129  T
Q  481 tactattaaagt 492  Q
    ||||||||||||    
T  37807130 tactattaaagt 37807141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 477
Target Start/End: Complemental strand, 12419269 - 12419110
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||| || |||||||||| |||||| |||||||||||| || |  || | |||| ||||||||||| ||| ||||||||||        
T  12419269 ggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggcct--tt 12419172  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         ||||||||||| |||||||||||| |||| |||||||||||||||| || |||||||    
T  12419171 ttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttgcaggcct 12419110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 477
Target Start/End: Complemental strand, 43596297 - 43596131
Alignment:
Q  310 gggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggc 409  Q
    ||||| ||||||||||||  ||||| || |||||||||| ||||||||||||||||||| || |  || | |||| ||||||||||| ||| |||||||     
T  43596297 gggttgggaataggccaggccaggccaggctttgataggcctgagcttggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatagg- 43596199  T
Q  410 ctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
     |         ||||||||||| |||||||||||  |||| |||||||||||||||| ||||||||||    
T  43596198 ttgtttttctaggcctggcctggcctatttaaaatcctggactggcctgaaagcctacttacaggcct 43596131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 317 - 474
Target Start/End: Original strand, 10227867 - 10228023
Alignment:
Q  317 gaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnn 416  Q
    |||||||||||  ||||| ||||||||||||| |||||| |||||||||||| || |  || | ||||  |||||||||||||| ||||||||| |        
T  10227867 gaataggccaggccaggccagactttgataggcctgagcctggcctacgaaataaatcacaagcctgagtctggcctatgacctatcataggcc-atttt 10227965  T
Q  417 nnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacagg 474  Q
        ||| || | || ||||||||||||||||| |||||||||||||||| |||||||    
T  10227966 tctaggcatgacttggcctatttaaaagtctggactggcctgaaagcctacttacagg 10228023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 27595649 - 27595593
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||    
T  27595649 ggcctggcctgacctatttaaaagtctggactggcctgaaagcctacttacaggcct 27595593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 421 - 477
Target Start/End: Original strand, 31377477 - 31377533
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||    
T  31377477 ggcctggcctgacctatttaaaagcctggactggcctgaaagcctatttacaggcct 31377533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 412
Target Start/End: Complemental strand, 41399834 - 41399731
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  |||||  | |||||||||| |||||| |||||||||||||| |||||||| || | |||||||||||  |||||||||    
T  41399834 tagggttgggaataggccaggccaggccgg-ctttgataggcctgagcctggcctacgaaaaattttgcaggcctaagcctggcctatggtctttcatag 41399736  T
Q  408 gccta 412  Q
    |||||    
T  41399735 gccta 41399731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 477
Target Start/End: Original strand, 13391062 - 13391222
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||| || |||||||||| |||||| |||||||| ||| || |  || | |||| ||||||||||| ||| |||||||| ||       
T  13391062 ggaataggccaggccaggccaggctttgataggcctgagcctggcctacaaaataaatcacaagcctgagcctggcctatggcctatcataggc-tattt 13391160  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         ||| ||||||| |||||||||||| || | |||||||||||||||| ||||||||||    
T  13391161 ttctaggcatggcctgacctatttaaaagcctagactggcctgaaagcctacttacaggcct 13391222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 2941136 - 2941080
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||||    
T  2941136 ggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcct 2941080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 41631579 - 41631523
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||||    
T  41631579 ggcctggcctgacctatttaaaagcctggactggcctgaaagcctacttacaggcct 41631523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 426 - 477
Target Start/End: Complemental strand, 23671158 - 23671107
Alignment:
Q  426 ggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||| ||||||||||||||||| |||||||||||||||| ||||||||||    
T  23671158 ggcctggcctatttaaaagtctggactggcctgaaagcctacttacaggcct 23671107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 446 - 492
Target Start/End: Original strand, 3357075 - 3357121
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  3357075 ctggcctggcctgaaagcctatttacaggcctacttactattaaagt 3357121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 14776192 - 14776146
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  14776192 ctggcctggcctgaaagcctatttacaggcctacttactattaaagt 14776146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 41399720 - 41399674
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  41399720 ctggcctggcctgaaagcctatttacaggcctacttactattaaagt 41399674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 474
Target Start/End: Complemental strand, 21441975 - 21441922
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacagg 474  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||| |||||||    
T  21441975 ggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacagg 21441922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 477
Target Start/End: Complemental strand, 41902934 - 41902794
Alignment:
Q  336 agactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccct 435  Q
    ||||||||||||| |||||| |||||||||||| || |  || | |||| ||||||||||| ||| |||||||||          ||||||| ||| |||    
T  41902934 agactttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccg-tttttctaggcctggtctggcct 41902836  T
Q  436 atttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||| |||| || ||||||||||||| ||||||||||    
T  41902835 atttaaaagcctggactagcctgaaagcctacttacaggcct 41902794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 412
Target Start/End: Complemental strand, 44980686 - 44980613
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    |||||||||| |||||||||||||||||||||||||||| |  ||| ||| ||||||  |||||| ||||||||    
T  44980686 ctttgataggcctgagcttggcctacgaaaaaatttgcaagcttgagcctagcctatagcctttcgtaggccta 44980613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 477
Target Start/End: Original strand, 21806612 - 21806668
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||| ||||| ||||    
T  21806612 ggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacatgcct 21806668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 433 - 492
Target Start/End: Original strand, 4067978 - 4068037
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||||||||| ||| ||||||||||||||||||  | | ||||||||||||||    
T  4067978 cctatttaaaagtctggcctgacctgaaagcctatttacaaacatacttactattaaagt 4068037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 36820918 - 36820872
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  36820918 ctggcctggcctaaaagcctatttacaggcctacttactattaaagt 36820872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 466
Target Start/End: Original strand, 44848024 - 44848173
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||| || |||||||| | |||||| |||||||||||| || |  || | |||| ||||||||||| ||| ||||| |||         
T  44848024 ggaataggccaggccaggccaggctttgataagcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataagccg-ttt 44848122  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagccta 466  Q
         ||||||||||| |||||||||||| |||| ||||||||||||||||    
T  44848123 ttctaggcctggcctgacctatttaaaagcctggactggcctgaaagccta 44848173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 474
Target Start/End: Complemental strand, 26574196 - 26574155
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacagg 474  Q
    ||||||||||||||| ||||||||||||| ||||||||||||    
T  26574196 cctatttaaaagtctagtctggcctgaaaacctatttacagg 26574155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 32584933 - 32584986
Alignment:
Q  424 ctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||||| |||||||||||| |||| ||||||| |||||||| ||||||||||    
T  32584933 ctggcctgacctatttaaaagcctggactggcctaaaagcctacttacaggcct 32584986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 424 - 477
Target Start/End: Complemental strand, 45470370 - 45470317
Alignment:
Q  424 ctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||||| |||||||||||| |||| ||||||| |||||||| ||||||||||    
T  45470370 ctggcctgacctatttaaaagcctggactggccttaaagcctacttacaggcct 45470317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 477
Target Start/End: Original strand, 5667188 - 5667244
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||||||||  ||||||||||| |||| ||| |||||||||||| ||||||||||    
T  5667188 ggcctggcctggtctatttaaaagcctggactgacctgaaagcctacttacaggcct 5667244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 492
Target Start/End: Complemental strand, 35516520 - 35516444
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctgg-----cctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||| ||||| |||||||||||| |||||||||     ||||||||||||||||||||||| |||  |||||||||    
T  35516520 ggcctagcctgacctatttaaaagcctggtctggcctggcctgaaagcctatttacaggcctactttatattaaagt 35516444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 46191680 - 46191624
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||| |||| ||||||||||||||| | |||||||||||||||| ||||| ||||    
T  46191680 ggcctgacctgacctatttaaaagtctagactggcctgaaagcctacttacaagcct 46191624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 374
Target Start/End: Original strand, 31377373 - 31377431
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaattt 374  Q
    ||||||||||||  ||||| || |||||||||| |||| | ||||||||||||||||||    
T  31377373 ggaataggccaggccaggccaggctttgataggcctgaacctggcctacgaaaaaattt 31377431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 408
Target Start/End: Complemental strand, 23671262 - 23671170
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatagg 408  Q
    ||||||||||||  ||||| ||||||||||||| || ||  |||||||||||| || |  || | |||| ||||||||||| ||| |||||||    
T  23671262 ggaataggccaggccaggccagactttgataggcctaagtctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatagg 23671170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 412
Target Start/End: Complemental strand, 24422015 - 24421919
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    ||||||||| || |||||| || |||||||||| |||||| ||||| |||||    |||||| |  ||| ||||||||||| |||||||| ||||||    
T  24422015 ggaataggcgaggtcaggccaggctttgataggcctgagcatggccgacgaatttttttgcaagcgtgagcctggcctatggcctttcatgggccta 24421919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 492
Target Start/End: Complemental strand, 32670336 - 32670288
Alignment:
Q  444 gtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||| ||| ||||||||||||||||||||| | |||| |||||||||    
T  32670336 gtctggcctgacctgaaagcctatttacaggcatacttaatattaaagt 32670288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 363
Target Start/End: Original strand, 37806988 - 37807044
Alignment:
Q  307 atagggttaggaataggccagctcaggctagactttgataggtctgagcttggccta 363  Q
    ||||||||  ||||||||||| |||||| ||| ||||||||| |||||| |||||||    
T  37806988 atagggttgagaataggccaggtcaggccagattttgataggcctgagcctggccta 37807044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 3e-49; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 40000905 - 40000722
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  40000905 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 40000806  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  40000805 gccta-tttttttggcctggcctggcctatttataagcctggtctggcctgaaagcctatttacaggcctacttactattaaagt 40000722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 308 - 492
Target Start/End: Original strand, 39391050 - 39391233
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  39391050 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 39391149  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||||||| |||| |||| |||||||||||||||||||||| ||||||||||||||    
T  39391150 gccta-ttattttggcctggcctggcctatttaaaagcctggcctggtctgaaagcctatttacaggcctacttactattaaagt 39391233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 1782810 - 1782627
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||||||||||| |||||||| || | ||||||||||| ||||||||||    
T  1782810 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctaagcctggcctatggcctttcatag 1782711  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  1782710 gccta-tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 1782627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 304 - 492
Target Start/End: Original strand, 33249408 - 33249595
Alignment:
Q  304 caaatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttc 403  Q
    ||||||||||| ||||||||||||  || || || |||||||||| |||||| |||||||||||||| |||||||| |||| ||||||||||| ||||||    
T  33249408 caaatagggttgggaataggccaggccaagccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggcctttc 33249507  T
Q  404 ataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||||        ||||||| ||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  33249508 ataggccta-tttttttggcctggtctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 33249595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 20647921 - 20647738
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| | |||||| |||  ||||| || |||||||||| |||||| |||||||||||||  ||||||||||||| ||||||||||| ||||||||||    
T  20647921 tagggttggaaataggtcaggccaggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggtctgagcctggcctatggcctttcatag 20647822  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  20647821 gcctattttttt-ggcctggcctgacctatttaaaagtctggcctggcctgaaagtctatttacaggcctacttactattaaagt 20647738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 492
Target Start/End: Original strand, 28793648 - 28793831
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| | |||||| |||  ||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  28793648 tagggttggaaataggtcaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 28793747  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
     ||||        ||||||||||| ||||||||||||||||| | |||||||||||||||||| |||||| ||||||||||||||    
T  28793748 accta-tttttttggcctggcctggcctatttaaaagtctggccaggcctgaaagcctatttataggcctacttactattaaagt 28793831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 47597210 - 47597027
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||| | || |||||||||| |||||| ||||||||||||   |||||||| |||| ||||||||||| ||||||||||    
T  47597210 tagggttgggaataggccaggccagaccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcatag 47597111  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  47597110 gcctattttttt-ggcctggcctggcctatttaaaagcctggtctggcctgaaagcctaattacaggcctacttactattaaagt 47597027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 330 - 492
Target Start/End: Complemental strand, 34422770 - 34422609
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||| || |||||||||| | |||| |||||||||||||||| |||||| |||| ||||||||||| ||||||| |||||||        |||||||||    
T  34422770 caggccaggctttgataggcccgagcctggcctacgaaaaaatatgcaggcctgagcctggcctatggcctttcacaggcctattttttt-ggcctggcc 34422672  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    || ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  34422671 tggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagt 34422609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 329 - 492
Target Start/End: Original strand, 55008112 - 55008274
Alignment:
Q  329 tcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggc 428  Q
    |||||| |||||||||||||||||||| || |||||||||||||||||||| |||| |||||| | || |||||||||||||||        || | ||     
T  55008112 tcaggccagactttgataggtctgagcctgtcctacgaaaaaatttgcaggcctgagcctggcttgtggcctttcataggccta-tttttttggtcaggt 55008210  T
Q  429 ctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  55008211 ctgacctatttaaaagtttggtctggcctgaaagcctatttacaggcctacttactattaaagt 55008274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 330 - 492
Target Start/End: Complemental strand, 52174909 - 52174748
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||| || |||||||||| |||||  |||||||||||||  |||||||| |||| ||||||||||| |||||||||||||||        |||||||||    
T  52174909 caggccaggctttgataggcctgagtctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcataggcctattttttt-ggcctggcc 52174811  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    || |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  52174810 tggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 52174748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 330 - 492
Target Start/End: Original strand, 54650463 - 54650624
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||| || ||||||||||||||||| |||||||||||||| |||||||| |||| ||||||||||| ||||| |||||||||        || ||||||    
T  54650463 caggccaggctttgataggtctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggccttttataggccta-tttttttggtctggcc 54650561  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    || |||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||||    
T  54650562 tggcctatttaaaagcctgccctggcctgaaagcctatttacaggcctacttactattaaagt 54650624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 339 - 492
Target Start/End: Original strand, 25536867 - 25537019
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatt 438  Q
    |||||||||| |||||  ||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||        ||| || |||| ||||||    
T  25536867 ctttgataggcctgagtctggcctacgaaaaaatttgcaggcctgagcctggtctatgacctttcataggccta-tttttttggcatgacctgacctatt 25536965  T
Q  439 taaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  25536966 taaaagcctggtctggcctgaaagcctatttacaggcctacttattattaaagt 25537019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 339 - 492
Target Start/End: Complemental strand, 40489140 - 40488988
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatt 438  Q
    |||||||||| |||||| |||| ||||||||||||| |||| |||| ||||||||||| |||||||||||| ||        |||||| |||| ||||||    
T  40489140 ctttgataggcctgagcctggcttacgaaaaaatttccaggcctgagcctggcctatggcctttcataggcttattttttt-ggcctgacctggcctatt 40489042  T
Q  439 taaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  40489041 taaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagt 40488988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 308 - 477
Target Start/End: Complemental strand, 34705435 - 34705267
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||||| |||   |||||||| |||| ||||||||||| ||||||||||    
T  34705435 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacaaaattttttgcaggcctgagcctggcctatggcctttcatag 34705336  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||        ||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||    
T  34705335 gccta-tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcct 34705267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 329 - 492
Target Start/End: Original strand, 46068007 - 46068169
Alignment:
Q  329 tcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggc 428  Q
    |||||| ||||| |||||||  ||||| | ||||||||||||||||||||| |||| ||||||||||| | |||||||||||||        || ||||     
T  46068007 tcaggccagactatgataggcttgagcctagcctacgaaaaaatttgcaggcctgagcctggcctatggcttttcataggcctattttttt-ggtctggt 46068105  T
Q  429 ctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||  ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  46068106 ctgggctatttaaaagcctggtctggcctgaaagcctatttacaggcctacttactattaaagt 46068169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 33069549 - 33069377
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| ||||||||||||| |||||| |||||||||||||||||||||||           |||||  ||||||||||    
T  33069549 tagggttgggaataggccaggccaggccagactttgataggcctgagcctggcctacgaaaaaatttgcagg-----------cctatagcctttcatag 33069461  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        |||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  33069460 gcctattttttt-ggcctgacctgacctatttaaaagtctggcctggcctgaaagcctatttacaggcctccttactattaaagt 33069377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 308 - 412
Target Start/End: Original strand, 19420962 - 19421066
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  19420962 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 19421061  T
Q  408 gccta 412  Q
    |||||    
T  19421062 gccta 19421066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 304 - 412
Target Start/End: Complemental strand, 24541106 - 24540998
Alignment:
Q  304 caaatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttc 403  Q
    ||||||||||| |||||||||||   ||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  24541106 caaatagggttgggaataggccaagccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttc 24541007  T
Q  404 ataggccta 412  Q
    |||||||||    
T  24541006 ataggccta 24540998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 316 - 482
Target Start/End: Complemental strand, 26994877 - 26994712
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||| ||||||||||||| |||||| |||||||||||||||||| |||| |||| ||||||||||| ||| |||||||||         
T  26994877 ggaataggccagaccaggccagactttgataggcctgagcctggcctacgaaaaaatttacaggcctgagcctggcctatggcctatcataggcc-gttt 26994779  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttctta 482  Q
         ||||||||||| |||||||||||| |||| |||||||||||| ||| ||||| |||| ||||    
T  26994778 ttctaggcctggcctgacctatttaaaagcctggactggcctgaaagtctaattacaagcctactta 26994712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 386 - 492
Target Start/End: Complemental strand, 40000581 - 40000476
Alignment:
Q  386 cctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttacta 485  Q
    ||||||||||| |||||||||||||||        ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||||    
T  40000581 cctggcctatggcctttcataggcctattttttt-ggcctggcctggcctatttataagcctggtctggcctgaaagcctatttacaggcctacttacta 40000483  T
Q  486 ttaaagt 492  Q
    |||||||    
T  40000482 ttaaagt 40000476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 339 - 492
Target Start/End: Original strand, 47844526 - 47844683
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatt 438  Q
    |||||||||| |||||  |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||        ||||||  ||| ||||||    
T  47844526 ctttgataggcctgagtctggcctacgaaaaaatttgcaggtctgagcctggcctatggcctttcataggccta-tttttttggcctgatctggcctatt 47844624  T
Q  439 taaa-----agtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||     || || | || |||||||||||||||||||||||| ||||||||||||||    
T  47844625 taaaagcctagcctagcctagcctgaaagcctatttacaggcctacttactattaaagt 47844683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 412
Target Start/End: Original strand, 29076864 - 29076968
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||||||||||  |||||||| |||| ||||||||||| ||||||||||    
T  29076864 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcatag 29076963  T
Q  408 gccta 412  Q
    |||||    
T  29076964 gccta 29076968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 308 - 474
Target Start/End: Complemental strand, 43010360 - 43010194
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaa-aaaatttgcaggtctgaacctggcctatgacctttcata 406  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| || || | || | ||||||||||| ||| | |||    
T  43010360 tagggttgggaataggccagatcaggctagactttgataggtctgagcctggcctacgaaaaaaaattacaagcctaagcctggcctatggcctattata 43010261  T
Q  407 ggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacagg 474  Q
    ||||          || |||||||| ||||||||||||||||| ||| |||||||||||| |||||||    
T  43010260 ggcc-gtttttcttggtctggcctgacctatttaaaagtctggactgacctgaaagcctacttacagg 43010194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 306 - 412
Target Start/End: Original strand, 13596159 - 13596265
Alignment:
Q  306 aatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcat 405  Q
    ||||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||||||||||| | |||| |||||  |||| ||||||||    
T  13596159 aatagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaagcctgagcctggtatatggcctttcat 13596258  T
Q  406 aggccta 412  Q
    |||||||    
T  13596259 aggccta 13596265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 339 - 412
Target Start/End: Original strand, 34636368 - 34636441
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    |||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  34636368 ctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggccta 34636441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 412
Target Start/End: Original strand, 53002180 - 53002259
Alignment:
Q  333 gctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||||||||| | ||||||||| |||||||||| ||||    
T  53002180 gctaggctttgataggtctgagcctggcctacaaaaaaatttgcaggtctgagcttggcctatggcctttcatagaccta 53002259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 316 - 482
Target Start/End: Original strand, 39889329 - 39889494
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||| | || |||||||||| |||||| |||||||||||||||||| |||| |||| ||||||||||| ||| |||||||||         
T  39889329 ggaataggccagaccagaccaggctttgataggcctgagcctggcctacgaaaaaatttacaggcctgagcctggcctatggcctatcataggcc-gttt 39889427  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttctta 482  Q
         || |||||||| | |||||||||| |||| |||||||||||||||| ||||| |||| ||||    
T  39889428 ttctaggtctggcctggcttatttaaaagcctggactggcctgaaagcctaattacaagcctactta 39889494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 424 - 492
Target Start/End: Original strand, 41873497 - 41873565
Alignment:
Q  424 ctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||| ||||||||||||| ||| |||||||||||| |||||||||||||| ||||||||||||||    
T  41873497 ctggcctggcctatttaaaagtatggcctggcctgaaagtctatttacaggcctacttactattaaagt 41873565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 330 - 477
Target Start/End: Complemental strand, 41129825 - 41129679
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||| || |||||||||| |||||| |||||||||||||||||| || | |||| |||||||| || ||| | |||||||          |||||||||    
T  41129825 caggccaggctttgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattataggccg-tttttcttggcctggcc 41129727  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    || |||||||||||| |||| |||||||||||||||| ||||||||||    
T  41129726 tgacctatttaaaagcctggactggcctgaaagcctacttacaggcct 41129679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 437 - 492
Target Start/End: Original strand, 53002269 - 53002324
Alignment:
Q  437 tttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  53002269 tttaaaagtctggtctggcctgaaagcctatttacatgcctacttactattaaagt 53002324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 330 - 412
Target Start/End: Original strand, 33370432 - 33370514
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    ||||| || |||||||||| |||||  |||| |||||||||||||||||| || | |||||||||||||||||||||||||||    
T  33370432 caggccaggctttgataggcctgagtctggcatacgaaaaaatttgcaggcctaagcctggcctatgacctttcataggccta 33370514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 4357036 - 4356980
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||    
T  4357036 ggcctggcctgacctatttaaaagcctggactggcctgaaagcctatttacaggcct 4356980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 445 - 492
Target Start/End: Complemental strand, 39171430 - 39171383
Alignment:
Q  445 tctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39171430 tctggtctggcctgaaagcctatttacaggcctacttactattaaagt 39171383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 466
Target Start/End: Original strand, 4481649 - 4481806
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||| ||| |||||| |||||||||||||||| | || | || | ||||||||||| ||| ||||||    
T  4481649 tagggttgggaataggccaggccaggccaggctttgaaaggcctgagcctggcctacgaaaaaatatacaagcctaagcctggcctatggcctatcatag 4481748  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagccta 466  Q
    |||          ||||||||||| |||||| ||||| |||| ||||||||||||||||    
T  4481749 gcc-gtttttcttggcctggcctggcctattaaaaagcctggcctggcctgaaagccta 4481806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 477
Target Start/End: Complemental strand, 25593789 - 25593629
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||  || |||||||||| |||||| |||||||||||| || |  || |||||| ||||||||||| ||| |||||||||         
T  25593789 ggaataggccagggcaggtcaggctttgataggcctgagcctggcctacgaaataaatcacaagtctgagcctggcctatggcctatcataggcc-gttt 25593691  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         ||||||||||| ||||||||||||  | | |||||||||||||||| ||||||||||    
T  25593690 ttttaggcctggcctggcctatttaaaagcgtagactggcctgaaagcctacttacaggcct 25593629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 444 - 492
Target Start/End: Original strand, 34636450 - 34636498
Alignment:
Q  444 gtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  34636450 gtctggcctggcctgaaagcctatttacaggcctacttactattaaagt 34636498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 35761521 - 35761465
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||| ||||||||||||||||| | |||||||||||||| ||||||||||    
T  35761521 ggcctggcctgacctatttaaaagtctggaccggcctgaaagcctacttacaggcct 35761465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 372 - 492
Target Start/End: Original strand, 46116481 - 46116600
Alignment:
Q  372 tttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttac 471  Q
    ||||||||||||| ||||||||||| |||||||||||||||         |||||| ||| |||||||||||| |||  ||| |||||||||||||||||    
T  46116481 tttgcaggtctgagcctggcctatggcctttcataggcctattttttta-gcctggtctggcctatttaaaaggctgacctgacctgaaagcctatttac 46116579  T
Q  472 aggccttcttactattaaagt 492  Q
    |  ||| |||| |||||||||    
T  46116580 atacctacttattattaaagt 46116600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 412
Target Start/End: Complemental strand, 46181980 - 46181876
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    |||||||  |||||||| || |||||  || ||||||||||| ||||| || |||||||||||||||||||| ||||  ||| ||||||  |||||||||    
T  46181980 tagggttgagaataggctaggtcaggtcaggctttgataggtttgagcctgacctacgaaaaaatttgcaggcctgagtctgacctatggtctttcatag 46181881  T
Q  408 gccta 412  Q
    |||||    
T  46181880 gccta 46181876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 477
Target Start/End: Original strand, 24133778 - 24133924
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||| || |||||||||| |||||| |||||||||||| || |  || | |||| ||||||||||| ||| |||||||||          || ||||||    
T  24133778 caggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccg-tttttctaggtctggcc 24133876  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    || |||||||||||| |||| |||||||||||||||| ||||||||||    
T  24133877 tgacctatttaaaagcctggactggcctgaaagcctacttacaggcct 24133924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 477
Target Start/End: Complemental strand, 46136466 - 46136320
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||| || |||||||||| |||||  |||||||||||||||||| || | |||| |||||||| || ||| | |||||||          ||||||| |    
T  46136466 caggccaggctttgataggcctgagtctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattataggccg-tttttcttggcctggtc 46136368  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    || ||||||||||||||||| |||||||||||||||| ||||| ||||    
T  46136367 tgacctatttaaaagtctggactggcctgaaagcctacttacatgcct 46136320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 451 - 493
Target Start/End: Original strand, 13596276 - 13596318
Alignment:
Q  451 ctggcctgaaagcctatttacaggccttcttactattaaagtt 493  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  13596276 ctggcctgaaagcctatttacaggcctacttactattaaagtt 13596318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 446 - 492
Target Start/End: Original strand, 19421077 - 19421123
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  19421077 ctggcctggcctgaaagcctatttacaggcctacttactattaaagt 19421123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 446 - 492
Target Start/End: Original strand, 29076979 - 29077025
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  29076979 ctggcctggcctgaaagcctatttacaggcctacttactattaaagt 29077025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 466
Target Start/End: Original strand, 51302369 - 51302518
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||   |||| || |||||||||| |||||| |||||||||||| || |  || | |||| ||||||||||| ||| |||||||||         
T  51302369 ggaataggccaggctaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccg-ttt 51302467  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagccta 466  Q
         ||||||||||| |||||||||||| |||| ||||||||||||||||    
T  51302468 ttctaggcctggcctggcctatttaaaagcctggactggcctgaaagccta 51302518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 477
Target Start/End: Complemental strand, 9338386 - 9338218
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||| ||||| || |  || | |||| ||||||||||| ||| ||||||    
T  9338386 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctgcgaaataaatcacaagcctgagcctggcctatggcctatcatag 9338287  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    | |          ||||||||||| |||||||||||| |||| ||| |||||||||||| ||||| ||||    
T  9338286 gtcg-tttttctaggcctggcctggcctatttaaaagcctggactgacctgaaagcctacttacaagcct 9338218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 447 - 492
Target Start/End: Complemental strand, 18984220 - 18984175
Alignment:
Q  447 tggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  18984220 tggtctggcctgaaagcctatttacagacctacttactattaaagt 18984175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 447 - 492
Target Start/End: Complemental strand, 24540991 - 24540946
Alignment:
Q  447 tggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||    
T  24540991 tggtctggcctgaaagcctattcacaggcctacttactattaaagt 24540946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 303 - 374
Target Start/End: Complemental strand, 4357153 - 4357082
Alignment:
Q  303 acaaatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaattt 374  Q
    |||| ||||| | ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||||||||    
T  4357153 acaactaggggtgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaattt 4357082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 477
Target Start/End: Complemental strand, 31405931 - 31405876
Alignment:
Q  422 gcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||||||| |||||||||||| |||| || ||||||||||||| ||||||||||    
T  31405931 gcctggcctgacctatttaaaagcctggactagcctgaaagcctacttacaggcct 31405876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 482
Target Start/End: Complemental strand, 24120364 - 24120235
Alignment:
Q  352 gagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtc 451  Q
    |||| ||||||||||||||||||  ||||||||  |||||||||| ||| |||||||||          || ||| |||| |||||||||||| |||| |    
T  24120364 gagcctggcctacgaaaaaatttataggtctgagtctggcctatggcctatcataggccg-tttttctaggtctgacctgacctatttaaaagcctggac 24120266  T
Q  452 tggcctgaaagcctatttacaggccttctta 482  Q
    ||| ||||||||||| |||||||||| ||||    
T  24120265 tggtctgaaagcctaattacaggcctactta 24120235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 492
Target Start/End: Original strand, 33370525 - 33370571
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  33370525 ctggcctggcctgaaagcctatttacagacctacttactattaaagt 33370571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 45387599 - 45387652
Alignment:
Q  424 ctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||||| || |||||||||||||| |||||||||||||||| ||| ||||||    
T  45387599 ctggcctggccgatttaaaagtctggactggcctgaaagcctacttagaggcct 45387652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 473
Target Start/End: Original strand, 42294221 - 42294273
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacag 473  Q
    ||||||||||| |||||||||||| |||| ||| |||||||||||| ||||||    
T  42294221 ggcctggcctggcctatttaaaagcctggactgacctgaaagcctacttacag 42294273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 477
Target Start/End: Original strand, 41636396 - 41636451
Alignment:
Q  422 gcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||||||| ||||||||||||  ||| || ||||||||||||| ||||||||||    
T  41636396 gcctggcctggcctatttaaaagcttggactcgcctgaaagcctacttacaggcct 41636451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 404
Target Start/End: Original strand, 28125766 - 28125836
Alignment:
Q  334 ctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttca 404  Q
    |||| ||||||||||||| |||||||| ||| ||||| |||||| ||||||  |||| ||||| |||||||    
T  28125766 ctaggctttgataggtctaagcttggcttacaaaaaattttgcaagtctgagtctggtctatggcctttca 28125836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 421 - 471
Target Start/End: Original strand, 50638595 - 50638645
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttac 471  Q
    ||||||| ||| ||||||||||||||||| ||| |||||||||||| ||||    
T  50638595 ggcctggtctggcctatttaaaagtctggactgacctgaaagcctacttac 50638645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 377
Target Start/End: Original strand, 53002082 - 53002128
Alignment:
Q  331 aggctagactttgataggtctgagcttggcctacgaaaaaatttgca 377  Q
    ||||||| ||||||||||||||||  |||||||| ||||||||||||    
T  53002082 aggctaggctttgataggtctgagtctggcctacaaaaaaatttgca 53002128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 466
Target Start/End: Complemental strand, 26020364 - 26020319
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagccta 466  Q
    ||||||||||| ||||||||||||  ||| ||||||||||||||||    
T  26020364 ggcctggcctgacctatttaaaagcatggactggcctgaaagccta 26020319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 372 - 412
Target Start/End: Complemental strand, 39171479 - 39171439
Alignment:
Q  372 tttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    |||||||| |||| ||||||||||| |||||||||||||||    
T  39171479 tttgcaggcctgagcctggcctatggcctttcataggccta 39171439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 2e-47; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 303 - 492
Target Start/End: Complemental strand, 3729181 - 3728993
Alignment:
Q  303 acaaatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgaccttt 402  Q
    |||||||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||| | | |||    
T  3729181 acaaatagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctacggcattt 3729082  T
Q  403 cataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||        |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  3729081 cataggccta-tttttttggcctggcttggcctatttaaaagtctggtctggcctgaaagcctatttacagacctacttactattaaagt 3728993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 4111508 - 4111325
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||||||||||  |||||||| |||| ||||||||||||||||||||||    
T  4111508 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatgacctttcatag 4111409  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  4111408 gccta-ttattttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 4111325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 308 - 492
Target Start/End: Original strand, 13276560 - 13276743
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||||||||||| |||||||| |||| ||||||||||| ||||||||||    
T  13276560 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggcctttcatag 13276659  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  13276660 gccta-tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 13276743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 28891032 - 28890849
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||||||||||| |||||||| |||| ||||||||||| ||||||||||    
T  28891032 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggcctttcatag 28890933  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  28890932 gccta-tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 28890849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 305 - 492
Target Start/End: Original strand, 5153313 - 5153499
Alignment:
Q  305 aaatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttca 404  Q
    |||||||||| ||||||||||||  ||||| || |||||||| |||||||| |||||||||||||| ||||||||  ||| ||||||||||| |||||||    
T  5153313 aaatagggttgggaataggccaggccaggccaggctttgataagtctgagcctggcctacgaaaaattttgcaggcttgagcctggcctatggcctttca 5153412  T
Q  405 taggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||        ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  5153413 taggccta-tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 5153499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 307 - 492
Target Start/End: Complemental strand, 3027409 - 3027225
Alignment:
Q  307 atagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcata 406  Q
    |||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||||||||||  |||||||| |||| ||||||||||| |||||||||    
T  3027409 atagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcata 3027310  T
Q  407 ggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||        |||||| |||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  3027309 ggccta-ttattttggcctgacctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 3027225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 12297050 - 12296865
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| |||||||||||||||||||  ||||||||||||||||||||||| || | ||||||||||| ||||||||||    
T  12297050 tagggttgggaataggccaggccaggccagactttgataggtctgagtctggcctacgaaaaaatttgcaggcctaagcctggcctatggcctttcatag 12296951  T
Q  408 gccta-nnnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||          ||||| |||  ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  12296950 gcctattttttttttgcctgacctaacctatttaaaagtctggcctggcctgaaagcctatttacaggcctaattactattaaagt 12296865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 339 - 492
Target Start/End: Original strand, 27613306 - 27613458
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatt 438  Q
    |||||||||| |||||| || |||||||||||||||||||| |||| ||||||||||| |||||||||||||||        ||| ||||||  ||||||    
T  27613306 ctttgataggcctgagcctgacctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctattttttt-ggcttggccttgcctatt 27613404  T
Q  439 taaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  27613405 taaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagt 27613458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 307 - 412
Target Start/End: Complemental strand, 8437697 - 8437592
Alignment:
Q  307 atagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcata 406  Q
    |||||||| ||||||||||||  ||||| ||||||||||||| |||||  ||||||||||||||||||||||| |||| ||||||||||| |||||||||    
T  8437697 atagggttgggaataggccaggccaggccagactttgataggcctgagtctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcata 8437598  T
Q  407 ggccta 412  Q
    ||||||    
T  8437597 ggccta 8437592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 351 - 492
Target Start/End: Complemental strand, 31803197 - 31803057
Alignment:
Q  351 tgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatttaaaagtctggt 450  Q
    ||||| || ||||||||||||||||||||||||| ||||||||||| |||||||||||||||        || || | ||| |||||||||||| ||       
T  31803197 tgagcctgacctacgaaaaaatttgcaggtctgagcctggcctatggcctttcataggccta-tttttttggtcttgtctggcctatttaaaagcctaac 31803099  T
Q  451 ctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  31803098 ctggcctgaaagcctatttacaggcctacttactattaaagt 31803057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 477
Target Start/End: Original strand, 1101182 - 1101356
Alignment:
Q  302 cacaaatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctt 401  Q
    ||||| ||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||||||||| || |  || | |||| ||||||||||| |||     
T  1101182 cacaattagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggccta 1101281  T
Q  402 tcataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||||||          ||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||||    
T  1101282 tcataggcc-gtttttttaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcct 1101356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 357 - 477
Target Start/End: Original strand, 3257163 - 3257282
Alignment:
Q  357 tggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcc 456  Q
    ||||||||||||   |||||||| |||| ||||||||||| |||||||||||||||        |||||||| || ||||||||||||||||| ||||||    
T  3257163 tggcctacgaaattttttgcaggcctgagcctggcctatggcctttcataggcctattttttt-ggcctggcttggcctatttaaaagtctggcctggcc 3257261  T
Q  457 tgaaagcctatttacaggcct 477  Q
    |||||||||||||||||||||    
T  3257262 tgaaagcctatttacaggcct 3257282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 492
Target Start/End: Complemental strand, 1449936 - 1449797
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatt 438  Q
    |||||||||| |||||  ||| |||||||||||||| |||| ||||  |||||||||| |||||||||||||||              | ||| ||||||    
T  1449936 ctttgataggcctgagtctggtctacgaaaaaatttacaggcctgagtctggcctatggcctttcataggccta--------------gtctggcctatt 1449851  T
Q  439 taaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  1449850 taaaagcctggtctggcctaaaagcctatttacaggcctacttactattaaagt 1449797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 330 - 412
Target Start/End: Original strand, 24011953 - 24012035
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    ||||| || |||||||||| |||||| ||||||||||||||||||||||| | || ||||||||||| |||||||||||||||    
T  24011953 caggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcccgagcctggcctatggcctttcataggccta 24012035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 330 - 473
Target Start/End: Original strand, 34858150 - 34858292
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||| || ||||||||||||||||| ||||||||||||||| |  || | |||| ||||||||||| ||| |||||||||          |||||||||    
T  34858150 caggccaggctttgataggtctgagcctggcctacgaaaaaaatcacaagcctgagcctggcctatggcctatcataggcc-gtttttctaggcctggcc 34858248  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacag 473  Q
    || |||||||||||| |||| |||||||||||||||| ||||||    
T  34858249 tgacctatttaaaagcctggactggcctgaaagcctacttacag 34858292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 473
Target Start/End: Complemental strand, 32187400 - 32187244
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||| |  |||||||||| |||||| |||||||||||| || |  || | |||| ||||||||||| ||| |||||||||         
T  32187400 ggaataggccaggccaggccatgctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccg-ttt 32187302  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacag 473  Q
         ||||||||||| |||||||||||| |||| |||||||||||||||| ||||||    
T  32187301 ttctaggcctggcctgacctatttaaaagcctggactggcctgaaagcctacttacag 32187244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 433 - 492
Target Start/End: Original strand, 24848996 - 24849055
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||||||| |||| ||||||| ||| ||||||||||||||| ||||||||||||||    
T  24848996 cctatttaaaagcctggcctggcctaaaaacctatttacaggcctacttactattaaagt 24849055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 421 - 475
Target Start/End: Complemental strand, 4174230 - 4174176
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggc 475  Q
    |||||| |||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  4174230 ggcctgacctggcctatttaaaagtctggactggcctgaaagcctaattacaggc 4174176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 17156339 - 17156392
Alignment:
Q  424 ctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||| ||| |||||||||||| |||| |||||||||||||||||||||||||||    
T  17156339 ctggtctgacctatttaaaagcctggactggcctgaaagcctatttacaggcct 17156392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 451 - 492
Target Start/End: Original strand, 24012046 - 24012087
Alignment:
Q  451 ctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  24012046 ctggcctgaaagcctatttacaggcctacttactattaaagt 24012087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 339 - 410
Target Start/End: Complemental strand, 479272 - 479201
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcc 410  Q
    |||||||||| |||||| |||||||||||||||||| |||| ||||  ||||||||||  || |||||||||    
T  479272 ctttgataggcctgagcctggcctacgaaaaaatttacaggcctgagtctggcctatggtctatcataggcc 479201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 9283922 - 9283866
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||| | ||||||||||||||||| ||| |||  ||||||||||||||||||    
T  9283922 ggcctggcccggcctatttaaaagtctggcctgccctagaagcctatttacaggcct 9283866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 379
Target Start/End: Complemental strand, 11982539 - 11982476
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcagg 379  Q
    ||||||||||||  ||||| ||||||| |||||||||||| || | ||||||||||||| ||||    
T  11982539 ggaataggccaggccaggccagactttaataggtctgagcctgacttacgaaaaaatttacagg 11982476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 492
Target Start/End: Complemental strand, 14610627 - 14610588
Alignment:
Q  453 ggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||| ||||||||||||||| ||||||||||||||    
T  14610627 ggcctgaaaacctatttacaggcctacttactattaaagt 14610588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 379
Target Start/End: Original strand, 24848888 - 24848959
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcagg 379  Q
    ||||||| | ||||||||||   |||| ||||||||||||| |||||  |||||||||||||| ||||||||    
T  24848888 tagggttggaaataggccaggcgaggccagactttgataggcctgagtctggcctacgaaaaattttgcagg 24848959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 8437576 - 8437530
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||| ||| |||||||||||||||||||| || ||||||||||||||    
T  8437576 ctggcctgacctgaaagcctatttacaggtctacttactattaaagt 8437530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 477
Target Start/End: Complemental strand, 13041700 - 13041651
Alignment:
Q  428 cctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||| |||||||||||| ||||  ||||||||||||||| ||||||||||    
T  13041700 cctgacctatttaaaagcctggattggcctgaaagcctacttacaggcct 13041651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 492
Target Start/End: Original strand, 23645943 - 23645984
Alignment:
Q  451 ctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||||| ||||||||||| | ||||||||||||||    
T  23645943 ctggcctgaaagcgtatttacaggcttacttactattaaagt 23645984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 13041811 - 13041759
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaa 368  Q
    ||||||||||||  |||||||| |||||||||| |||||  ||||||||||||    
T  13041811 ggaataggccaggccaggctaggctttgataggcctgagtctggcctacgaaa 13041759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 81464 - 81281
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || ||||||||||  ||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  81464 tagggttgggaataggccaggccaggccaggctttgataggcttgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 81365  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  81364 gccta-ttattttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 81281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 7e-47; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 36054767 - 36054584
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| |||||||||||   ||||| || |||||||||| |||||| |||||||||||||||||||| || |||| ||||||||||| ||||||||||    
T  36054767 tagggttgggaataggccataccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgctggcctgagcctggcctatggcctttcatag 36054668  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36054667 gcctattttttt-ggtctggcctggcctatttaaaagtctggtctggcctgaaagcctatttacaggcctacttactattaaagt 36054584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 303 - 492
Target Start/End: Original strand, 36684667 - 36684855
Alignment:
Q  303 acaaatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgaccttt 402  Q
    |||| ||||||| ||||||||||||  ||||| |  |||||||||| |||||| |||||||||||||  |||||||| |||| ||||||||||| |||||    
T  36684667 acaattagggttgggaataggccaggccaggccacgctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggccttt 36684766  T
Q  403 cataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||        ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  36684767 cataggcctattatttt-ggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 36684855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 492
Target Start/End: Original strand, 11989029 - 11989212
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| |  |||||||||| |||||| ||||| ||||||||||||||||| |||| |||| |||||| ||||||||||    
T  11989029 tagggttgggaataggccaggccaggccatgctttgataggcctgagcctggccaacgaaaaaatttgcaggcctgagcctgacctatggcctttcatag 11989128  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||||||||    
T  11989129 gccta-ttattttggcctggcctgacctatttaaaattctggcctggcctgaaagcctatttacaggcctacttaccattaaagt 11989212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 7323315 - 7323132
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| ||||||| ||||| |||||| | ||||||||||||||||||||| |||| |||||| |||| ||||||||||    
T  7323315 tagggttgggaataggccaggccaggccagactttaataggcctgagcctagcctacgaaaaaatttgcaggcctgagcctggcatatggcctttcatag 7323216  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        | |||| |||| |||||||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  7323215 gccta-tttttttgacctgtcctggcctatttaaatgtctggcctgacctgaaagcctatttacaggcctacttactattaaagt 7323132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 308 - 477
Target Start/End: Original strand, 26241267 - 26241435
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||   |||||||| |||| ||||||||||| ||||||||||    
T  26241267 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcatag 26241366  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||        ||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||    
T  26241367 gccta-tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcct 26241435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 330 - 492
Target Start/End: Original strand, 12615142 - 12615298
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||| || |||||||||| |||||| || |||||||||||||||||||| |||| ||||||||||| |||||||||||||||        || ||||||    
T  12615142 caggccaggctttgataggcctgagcctgacctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggccta-ttattttggtctggcc 12615240  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    || |||||||||||     | ||||||||||||||||||||||||||| ||||||||||||||    
T  12615241 tggcctatttaaaa-----gcctggcctgaaagcctatttacaggcctacttactattaaagt 12615298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 307 - 492
Target Start/End: Original strand, 10921067 - 10921250
Alignment:
Q  307 atagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcata 406  Q
    |||||||| |||||||||  |  ||||| || |||||||||| |||||| || |||||||||||||||||||| || | | ||||||||| |||||||||    
T  10921067 atagggttgggaataggcttggccaggccaggctttgataggcctgagcctgacctacgaaaaaatttgcaggcctaagcttggcctatggcctttcata 10921166  T
Q  407 ggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    | ||||        ||||||||||| |||||||| ||| |||| || |||||||||||||||||||||||| | ||||||||||||    
T  10921167 gaccta-tttttttggcctggcctggcctatttacaag-ctggactagcctgaaagcctatttacaggcctacatactattaaagt 10921250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 492
Target Start/End: Complemental strand, 33303911 - 33303719
Alignment:
Q  303 acaaatagggttaggaataggcca-gctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctt 401  Q
    |||||||||||| |||||| |||| |  ||||| || |||||||||| |||||| |||||||||||||  |||||||| |||| ||||||||||| ||||    
T  33303911 acaaatagggttgggaatacgccanggccaggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctt 33303812  T
Q  402 tcataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaa--gcctatttacaggccttcttactattaaagt 492  Q
    |||||||||          || |||||||| |||||||||||| |||| |||||||||||   |||  |||||||||| ||||||||||||||    
T  33303811 tcataggccctattattttggtctggcctggcctatttaaaagcctggcctggcctgaaaagcccttattacaggcctacttactattaaagt 33303719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 316 - 412
Target Start/End: Original strand, 23950296 - 23950392
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    ||||||||||||  ||||| || |||||||| | |||||| ||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  23950296 ggaataggccaggccaggccaggctttgataagcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggccta 23950392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 307 - 412
Target Start/End: Complemental strand, 32551698 - 32551593
Alignment:
Q  307 atagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcata 406  Q
    |||||||| |||||||| |||  ||||| || |||||||||| |||||| |||||||||||||||||||||||  ||| ||||||||||| |||||||||    
T  32551698 atagggttgggaataggtcagaccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcttgagcctggcctatggcctttcata 32551599  T
Q  407 ggccta 412  Q
     |||||    
T  32551598 tgccta 32551593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 316 - 477
Target Start/End: Complemental strand, 38600943 - 38600783
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||| || |||||||||| |||||| |||||||||||||||||| || | |||| ||||| || || ||| | |||||||         
T  38600943 ggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctgggctgtggcctattataggccg-ttt 38600845  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         ||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||    
T  38600844 ttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctatttacaggcct 38600783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 308 - 492
Target Start/End: Original strand, 31519144 - 31519317
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| |||||||||||| ||||||||     ||||||| |||||| ||||||||||||||||| ||| | ||||  |||| ||||| ||| ||||||    
T  31519144 tagggttgggaataggccaggtcaggcta-----tgataggcctgagcctggcctacgaaaaaattagcaagcctgagtctggtctatggcctatcatag 31519238  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||            ||||||| | ||||||||||||||| || |||||||||||||||||||||||| |||| |||||||||    
T  31519239 gcctatttttt------tggcctgacttatttaaaagtctggcctagcctgaaagcctatttacaggcctacttattattaaagt 31519317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 316 - 410
Target Start/End: Original strand, 35056187 - 35056281
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcc 410  Q
    |||||||||||| |||||  || |||||||||| |||||| |||||||||||||||||| |||| |||| ||||||||||| ||| |||||||||    
T  35056187 ggaataggccaggtcaggtcaggctttgataggcctgagcctggcctacgaaaaaatttacaggcctgatcctggcctatggcctatcataggcc 35056281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 477
Target Start/End: Complemental strand, 16365107 - 16364937
Alignment:
Q  306 aatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcat 405  Q
    ||||||| | ||||||||||||  ||||| ||||||||||||| |||||  |||||||||||| || |  || | |||| |||||| |||| ||| ||||    
T  16365107 aataggggtgggaataggccaggccaggccagactttgataggcctgagtctggcctacgaaataaatcacaagcctgagcctggcatatggcctatcat 16365008  T
Q  406 aggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||          ||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||||    
T  16365007 aggccg-tttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcct 16364937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 381 - 477
Target Start/End: Complemental strand, 16383983 - 16383888
Alignment:
Q  381 ctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||| ||||||||||| |||||||||||||||        ||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||    
T  16383983 ctgagcctggcctatggcctttcataggcctattttttt-ggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcct 16383888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 411
Target Start/End: Original strand, 10954370 - 10954442
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcct 411  Q
    |||||||||| |||||| ||| |||||||||| |||||||| |||| ||||||||||| ||||||||||||||    
T  10954370 ctttgataggcctgagcctggtctacgaaaaattttgcaggactgagcctggcctatggcctttcataggcct 10954442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 411
Target Start/End: Original strand, 10962375 - 10962447
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcct 411  Q
    |||||||||| |||||| ||| |||||||||| |||||||| |||| ||||||||||| ||||||||||||||    
T  10962375 ctttgataggcctgagcctggtctacgaaaaattttgcaggactgagcctggcctatggcctttcataggcct 10962447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 490
Target Start/End: Original strand, 30577079 - 30577187
Alignment:
Q  381 ctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttct 480  Q
    |||| ||||||||||| |||||||||||||||        ||||| || || |||||||||||| |||| |||||||||||||||||||| |||||| ||    
T  30577079 ctgagcctggcctatggcctttcataggcctattttttt-ggcctagcttgacctatttaaaagcctggcctggcctgaaagcctatttagaggcctact 30577177  T
Q  481 tactattaaa 490  Q
    ||||||||||    
T  30577178 tactattaaa 30577187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 466
Target Start/End: Original strand, 24580449 - 24580598
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||| ||||||||||||| |||||| |||||||||||| || |  || | |||| ||||||||||| ||| ||||||| ||        
T  24580449 ggaataggccaggccaggccagactttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatagg-ctgttt 24580547  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagccta 466  Q
         ||||||||||| ||||||||||||  ||| ||||||||||||||||    
T  24580548 ttctaggcctggcctggcctatttaaaagcgtggactggcctgaaagccta 24580598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 477
Target Start/End: Original strand, 14921374 - 14921534
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||| || |||||||||| |||||| |||||||||||| || |  || | |||| ||||||||||| ||| |||||||||         
T  14921374 ggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggcc-gttt 14921472  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         ||||||||||| |||||||||||| || | |||||||||||||||| ||||| ||||    
T  14921473 ttctaggcctggcctgacctatttaaaagcctagactggcctgaaagcctacttacatgcct 14921534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 477
Target Start/End: Complemental strand, 32983317 - 32983157
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  |||| ||| |||||||||| |||||| |||||||||||| || |  || | |||| |||| |||||| ||| |||||||||         
T  32983317 ggaataggccaggccaggttaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctgacctatggcctatcataggccg-ttt 32983219  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         || |||| ||| ||||||||||||||||| |||||||||||||||| ||||||||||    
T  32983218 ttctaggtctggtctgacctatttaaaagtctggactggcctgaaagcctacttacaggcct 32983157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 444 - 492
Target Start/End: Original strand, 23950401 - 23950449
Alignment:
Q  444 gtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  23950401 gtctggcctggcctgaaagcctatttacaggcctacttactattaaagt 23950449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 444 - 492
Target Start/End: Complemental strand, 32415375 - 32415327
Alignment:
Q  444 gtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  32415375 gtctggcctggcctgaaagcctatttacaggcctacttactattaaagt 32415327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 444 - 492
Target Start/End: Complemental strand, 32551584 - 32551536
Alignment:
Q  444 gtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  32551584 gtctggcctggcctgaaagcctatttacaggcctacttactattaaagt 32551536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 410
Target Start/End: Original strand, 40680359 - 40680451
Alignment:
Q  318 aataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcc 410  Q
    |||||||||| |||| | || || ||||||| |||||| |||||||||||||||||| || | |||| ||||||||||| ||| |||||||||    
T  40680359 aataggccaggtcagaccaggctatgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctggcctatggcctatcataggcc 40680451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 477
Target Start/End: Original strand, 8000038 - 8000184
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    |||||||| |||||||||| |||||| |||||||||||| || |  || | |||| ||||||||||| ||| |||||||||          || ||||||    
T  8000038 caggctaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggcc-gtttttctaggtctggcc 8000136  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    || | |||||||||| |||| ||| |||||||||||| ||||||||||    
T  8000137 tgacttatttaaaagcctggactgacctgaaagcctacttacaggcct 8000184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 473
Target Start/End: Complemental strand, 41478441 - 41478390
Alignment:
Q  422 gcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacag 473  Q
    ||||| |||| ||||||||||||||||| |||||||||||||||| ||||||    
T  41478441 gcctgacctgacctatttaaaagtctggactggcctgaaagcctacttacag 41478390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 41478684 - 41478642
Alignment:
Q  424 ctggcctgccctatttaaaagtctggtctggcctgaaagccta 466  Q
    |||||||| ||||||||||||||||| ||||||||||||||||    
T  41478684 ctggcctgacctatttaaaagtctggactggcctgaaagccta 41478642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 421 - 466
Target Start/End: Complemental strand, 7960563 - 7960518
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagccta 466  Q
    ||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  7960563 ggcctggcctgacctatttaaaagtctggactggcttgaaagccta 7960518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 369
Target Start/End: Original strand, 26106378 - 26106439
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaa 369  Q
    ||||||| ||||||||||||  ||||| || |||||| ||| ||||||||||||||||||||    
T  26106378 tagggttgggaataggccaggccaggccaggctttgaaaggcctgagcttggcctacgaaaa 26106439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 36918609 - 36918678
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgca 377  Q
    ||||||||||||||||||||  || ||||||||||||||||  ||||| | |||||  ||||||||||||    
T  36918609 tagggttaggaataggccaggccaagctagactttgataggcatgagcctcgcctataaaaaaatttgca 36918678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 477
Target Start/End: Original strand, 23444507 - 23444551
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||||||||| |||||||||||| ||| ||||||||||    
T  23444507 cctatttaaaagtctggactggcctgaaagtctacttacaggcct 23444551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 477
Target Start/End: Original strand, 44710188 - 44710244
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||| ||| ||||||||||||||||| ||| |||||||||||| ||||| ||||    
T  44710188 ggcctggtctgacctatttaaaagtctggactgccctgaaagcctacttacatgcct 44710244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 466
Target Start/End: Complemental strand, 39506639 - 39506596
Alignment:
Q  423 cctggcctgccctatttaaaagtctggtctggcctgaaagccta 466  Q
    ||||||||| |||| | |||||||||||||||||||||||||||    
T  39506639 cctggcctggcctactaaaaagtctggtctggcctgaaagccta 39506596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 427 - 477
Target Start/End: Original strand, 44755621 - 44755671
Alignment:
Q  427 gcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||| |||||||||||| |||| ||| |||||||||||| ||||||||||    
T  44755621 gcctggcctatttaaaagcctggactgacctgaaagcctacttacaggcct 44755671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 492
Target Start/End: Original strand, 36918705 - 36918746
Alignment:
Q  451 ctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||||||||||||||||||| ||||  ||||||||    
T  36918705 ctggcctgaaagcctatttacaggcctacttatgattaaagt 36918746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 10954456 - 10954492
Alignment:
Q  444 gtctggtctggcctgaaagcctatttacaggccttct 480  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  10954456 gtctggcctggcctgaaagcttatttacaggccttct 10954492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 10962461 - 10962497
Alignment:
Q  444 gtctggtctggcctgaaagcctatttacaggccttct 480  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  10962461 gtctggcctggcctgaaagcttatttacaggccttct 10962497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 12638097 - 12638145
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctattt 469  Q
    ||||||||||| ||| |||||||| |||| ||| |||||||||||||||    
T  12638097 ggcctggcctggcctgtttaaaagcctggactgacctgaaagcctattt 12638145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 363
Target Start/End: Complemental strand, 16384026 - 16383970
Alignment:
Q  307 atagggttaggaataggccagctcaggctagactttgataggtctgagcttggccta 363  Q
    |||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||||    
T  16384026 atagggttgggaataggccaggccaggccaggctttgataggcctgagcctggccta 16383970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 44710085 - 44710137
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaa 368  Q
    |||||||||||| |||| | ||||||||||||| |||||| | ||||||||||    
T  44710085 ggaataggccaggtcagaccagactttgataggcctgagcctcgcctacgaaa 44710137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 44755552 - 44755604
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaa 368  Q
    ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||    
T  44755552 ggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaa 44755604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 7e-47; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 39860586 - 39860403
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| ||| ||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  39860586 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggtctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 39860487  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  39860486 gccta-ttattttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 39860403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 308 - 492
Target Start/End: Original strand, 52222725 - 52222908
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||||||||||| |||||||| || | ||||||||||| ||||||||||    
T  52222725 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctaagcctggcctatggcctttcatag 52222824  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  52222825 gccta-tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 52222908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 316 - 492
Target Start/End: Original strand, 8417235 - 8417410
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||| || |||||||||| |||||| |||||||||||||| |||||||| || | ||||||||||| |||||||||||||||       
T  8417235 ggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctaagcctggcctatggcctttcataggcctattt 8417334  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
         ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  8417335 tttt-ggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 8417410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 307 - 492
Target Start/End: Complemental strand, 6889634 - 6889450
Alignment:
Q  307 atagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcata 406  Q
    |||||||| ||||||||| ||  ||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||  |||||||||    
T  6889634 atagggttgggaataggctaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatagcctttcata 6889535  T
Q  407 ggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
     |||||        ||||||||| | ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  6889534 agccta-tttttttggcctggccaggcctatttaaaagtctggcctgacctgaaagcctatttacaggcctacttactattaaagt 6889450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 307 - 492
Target Start/End: Complemental strand, 6891480 - 6891296
Alignment:
Q  307 atagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcata 406  Q
    |||||||| ||||||||| ||  ||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||  |||||||||    
T  6891480 atagggttgggaataggctaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatagcctttcata 6891381  T
Q  407 ggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
     |||||        ||||||| ||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  6891380 agccta-tttttttggcctggtctggcctatttaaaagtctggcctgacctgaaagcctatttacaggcctacttactattaaagt 6891296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 330 - 492
Target Start/End: Original strand, 44969049 - 44969210
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||| || |||||||||| |||||| | ||||||||||||||||||||| |||| || || ||||| |||||||||||||||        |||||||||    
T  44969049 caggccaggctttgataggcctgagcctagcctacgaaaaaatttgcaggcctgatcccggtctatggcctttcataggcctattttttt-ggcctggcc 44969147  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    || ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  44969148 tgacctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagt 44969210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 339 - 492
Target Start/End: Original strand, 46846789 - 46846941
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatt 438  Q
    |||||||||| |||||| |||||||||||||| |||||||| |||| ||||||||||| |||||||||||||||        ||||||||||| ||||||    
T  46846789 ctttgataggcctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggcctttcataggcctattttttt-ggcctggcctggcctatt 46846887  T
Q  439 taaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||| || | ||||||||||||||||||||||||||| ||||||||||||||    
T  46846888 taaaagcctagcctggcctgaaagcctatttacaggcctacttactattaaagt 46846941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 306 - 492
Target Start/End: Original strand, 17805811 - 17805991
Alignment:
Q  306 aatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcat 405  Q
    ||||||||| ||||||||||||  ||||| || |||||||||| |||||| |||| ||||||||| |||||||| |||| ||||||||||| ||||||||    
T  17805811 aatagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcatacgaaaaattttgcaggcctgagcctggcctatggcctttcat 17805910  T
Q  406 aggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||        ||||||||||| |||||||||||     | ||||||||||||||||||||||||||| ||||||||||||||    
T  17805911 aggccta-tttttttggcctggcctggcctatttaaaa-----gcctggcctgaaagcctatttacaggcctacttactattaaagt 17805991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 308 - 477
Target Start/End: Complemental strand, 19709097 - 19708929
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||   |||||||| |||| ||||||||||| ||||||||||    
T  19709097 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcatag 19708998  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||        ||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||    
T  19708997 gccta-tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcct 19708929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 302 - 477
Target Start/End: Original strand, 33785188 - 33785362
Alignment:
Q  302 cacaaatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctt 401  Q
    ||||| ||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||   ||||||||  ||| ||||||||||| ||||    
T  33785188 cacaactagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcttgagcctggcctatggcctt 33785287  T
Q  402 tcataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||||||||        ||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||    
T  33785288 tcataggccta-tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcct 33785362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 339 - 492
Target Start/End: Original strand, 13253275 - 13253426
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatt 438  Q
    |||||||||| |||||| ||||||||||||||||||||||| |||| |||| |||||| ||||||||||||||         ||||||||||| ||||||    
T  13253275 ctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctgacctatggcctttcataggcct--tttttttggcctggcctggcctatt 13253372  T
Q  439 taaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||   || ||||||||||||||||||||||| ||||||||||||||    
T  13253373 taaaagtctgacatgacctgaaagcctatttacaggcctacttactattaaagt 13253426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 340 - 492
Target Start/End: Complemental strand, 50097134 - 50096983
Alignment:
Q  340 tttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctattt 439  Q
    |||||||||  |||| ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||        ||||||||||| |||||||    
T  50097134 tttgataggcttgagtttggcctacgaaaaaatttgcaggtctgagcatggcctatggcctttcataggccta-tttttttggcctggcctggcctattt 50097036  T
Q  440 aaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||| |||  ||||||||||||||||||||| | || ||||||||||||||    
T  50097035 aaaagtatggcttggcctgaaagcctatttacaagtctacttactattaaagt 50096983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 330 - 492
Target Start/End: Complemental strand, 31493544 - 31493383
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||| || |||||||||| |||||| |||||||||||||||||| || |  ||| ||||||||||||| |||||||||||||        ||||| |||    
T  31493544 caggccaggctttgataggcctgagcctggcctacgaaaaaatttacaagcttgagcctggcctatgacatttcataggcctattttttt-ggcctagcc 31493446  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    || |||||||||||||||||||||||| |||||| |||||||||||||  |||||||||||||    
T  31493445 tgacctatttaaaagtctggtctggcccgaaagcttatttacaggcctatttactattaaagt 31493383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 308 - 412
Target Start/End: Original strand, 34083969 - 34084073
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||||||||||||||||  ||||| ||||||||||||| |||||| ||||||||||||||||||||||| ||||  |||||||||| ||||||||||    
T  34083969 tagggttaggaataggccagaccaggccagactttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagtctggcctatggcctttcatag 34084068  T
Q  408 gccta 412  Q
    |||||    
T  34084069 gccta 34084073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 339 - 492
Target Start/End: Complemental strand, 6889090 - 6888939
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatt 438  Q
    ||||||||||||||||  ||||||||||||||||||||||| |||| |||| |||||| ||||||||| ||||          |||||||||| ||||||    
T  6889090 ctttgataggtctgagtctggcctacgaaaaaatttgcaggcctgagcctgacctatggcctttcataagcct--ttttttttgcctggcctggcctatt 6888993  T
Q  439 taaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||| |||| ||| ||| ||||| ||||||||||||| ||||||||||||||    
T  6888992 taaaagcctggcctgacctaaaagcatatttacaggcctacttactattaaagt 6888939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 306 - 492
Target Start/End: Original strand, 2988654 - 2988834
Alignment:
Q  306 aatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcat 405  Q
    ||||||||| |||||||||||   ||||  |||||||||||||||||||  || ||||||||||  ||||||||||||| |||||||||||  |||||||    
T  2988654 aatagggttgggaataggccacgccaggtcagactttgataggtctgagtctgacctacgaaaatttttgcaggtctgagcctggcctatggtctttcat 2988753  T
Q  406 aggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||  |||            ||||||  |||||||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||    
T  2988754 agatctatttttt------tggcctagcctatttaaaagcctggtctggcatgaaagtctatttacaggcctacttactattaaagt 2988834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 316 - 477
Target Start/End: Complemental strand, 42650152 - 42649992
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  |||||||  |||||||||| |||||| | |||||||||||||||| |||| |||| ||||||||||||||| |||||||||         
T  42650152 ggaataggccaggccaggctaagctttgataggcctgagcctagcctacgaaaaaatttacaggcctgagcctggcctatgacctatcataggcc-gttt 42650054  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         |||||| |||| |||||||||||| |||| |||||||||||||||| ||||| ||||    
T  42650053 ttctaggcctgacctggcctatttaaaagcctggactggcctgaaagcctaattacaagcct 42649992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 412
Target Start/End: Original strand, 18353088 - 18353192
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| |||||||| |||  ||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| |||||| |||| ||||||||||    
T  18353088 tagggttgggaataggtcaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcttatggcctttcatag 18353187  T
Q  408 gccta 412  Q
    |||||    
T  18353188 gccta 18353192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 412
Target Start/End: Original strand, 24038241 - 24038345
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| |||||||| ||| |||||| || |||||||||| |||||| ||||||||||||||||||||| | |||| ||| ||||||| ||||||||||    
T  24038241 tagggttgggaataggtcaggtcaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaagcctgagcctagcctatggcctttcatag 24038340  T
Q  408 gccta 412  Q
    |||||    
T  24038341 gccta 24038345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 307 - 477
Target Start/End: Original strand, 10805016 - 10805185
Alignment:
Q  307 atagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcata 406  Q
    |||||| | ||||||||||||  ||||| || ||||||||||  ||||| |||||||||||||||||| || | |||| |||||||| || ||| | |||    
T  10805016 ataggggtgggaataggccaggccaggccaggctttgataggcatgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattata 10805115  T
Q  407 ggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||          ||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||    
T  10805116 ggccg-tttttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctatttacaggcct 10805185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 477
Target Start/End: Original strand, 10311986 - 10312158
Alignment:
Q  304 caaatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttc 403  Q
    ||||||||| | |||||||||||| ||||||||| |||||||||| |||||| |||||||| |||||| || || | |||| |||||||| || ||| |     
T  10311986 caaataggggtgggaataggccaggtcaggctaggctttgataggcctgagcctggcctacaaaaaaaattacaagcctgagcctggcctgtggcctata 10312085  T
Q  404 ataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||||          |||||||||||  ||||||||||| |||| |||||||||||||||| ||||||||||    
T  10312086 ataggcc-gtttttcttggcctggcctgatctatttaaaagcctggactggcctgaaagcctacttacaggcct 10312158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 316 - 482
Target Start/End: Original strand, 6305032 - 6305197
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||| || ||||||||||||||||| ||||||| |||||||||| |||| |||||||||||||| |  || ||||||| ||        
T  6305032 ggaataggccaggccaggccaggctttgataggtctgagcctggcctatgaaaaaatttacaggcctgaacctggcctacggtctatcatagg-ctgttt 6305130  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttctta 482  Q
         || ||| |||| |||||||||||| |||| ||| |||||||||||| |||||||||| ||||    
T  6305131 ttctaggtctgacctggcctatttaaaagcctggactgccctgaaagcctaattacaggcctactta 6305197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 422 - 492
Target Start/End: Complemental strand, 45372795 - 45372725
Alignment:
Q  422 gcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||||  ||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||    
T  45372795 gcctggcctagcctatttaaaagtttggcctggcctgaaagcctatttacaggcctacttactattaaagt 45372725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 427 - 492
Target Start/End: Original strand, 3831588 - 3831653
Alignment:
Q  427 gcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||    
T  3831588 gcctggcctatttaaaagtctgacctggcctgaaagcctatttacaggcctacttactattaaagt 3831653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 477
Target Start/End: Original strand, 13077302 - 13077462
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    |||||||||||| |||||| ||||||||||||| |||||| | |||||||||| || |  || | |||| ||||||||||| ||| |||||||||         
T  13077302 ggaataggccaggtcaggccagactttgataggcctgagcctagcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggcc-gttt 13077400  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         ||||||||||| |||||||||||| |||| |||||||||||||||| ||||| ||||    
T  13077401 ttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaagcct 13077462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 412
Target Start/End: Complemental strand, 13884700 - 13884595
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaa-aaatttgcaggtctgaacctggcctatgacctttcata 406  Q
    ||||||| |||||||  ||| |||||| ||||||||||| |||||||| ||||||||||||    ||||||||||||| |||||| ||||||||||||||    
T  13884700 tagggttgggaatagatcaggtcaggccagactttgataagtctgagcctggcctacgaaatttttttgcaggtctgagcctggcttatgacctttcata 13884601  T
Q  407 ggccta 412  Q
    ||||||    
T  13884600 ggccta 13884595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 477
Target Start/End: Original strand, 39919612 - 39919772
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||| || |||||||||| |||||| |||||||||||| || |  || | |||| ||||||||||||||| |||||||||         
T  39919612 ggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatgacctatcataggcc-gttt 39919710  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         || |||||||| ||||||||||||||||| |||||||||||||||| ||||| ||||    
T  39919711 ttctaggtctggcctgacctatttaaaagtctggactggcctgaaagcctacttacatgcct 39919772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 336 - 412
Target Start/End: Original strand, 18437128 - 18437204
Alignment:
Q  336 agactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||| |||| ||| ||||||| |||||||||||||||    
T  18437128 agactttgataggcctgagcctggtctacgaaaaaatttgcaggcctgagcctagcctatggcctttcataggccta 18437204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 336 - 412
Target Start/End: Original strand, 18447985 - 18448061
Alignment:
Q  336 agactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||| |||| ||| ||||||| |||||||||||||||    
T  18447985 agactttgataggcctgagcctggtctacgaaaaaatttgcaggcctgagcctagcctatggcctttcataggccta 18448061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 336 - 412
Target Start/End: Original strand, 18453078 - 18453154
Alignment:
Q  336 agactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||| |||| ||| ||||||| |||||||||||||||    
T  18453078 agactttgataggcctgagcctggtctacgaaaaaatttgcaggcctgagcctagcctatggcctttcataggccta 18453154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 330 - 477
Target Start/End: Original strand, 42384222 - 42384368
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||| ||||||||||||| |||||| || ||||||||| || |  || | |||| ||||||||||| ||| |||||||||          |||||||||    
T  42384222 caggccagactttgataggcctgagcctgacctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccg-tttttctaggcctggcc 42384320  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    || ||||||||||||||||| |||||||||||||||| ||||||||||    
T  42384321 tgacctatttaaaagtctggactggcctgaaagcctacttacaggcct 42384368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 477
Target Start/End: Complemental strand, 47367590 - 47367454
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatt 438  Q
    ||||||||||||||||| |||||||||||| || |  || ||||||  |||||||||| ||| |||||||||          |||||| |||| ||||||    
T  47367590 ctttgataggtctgagcctggcctacgaaataaatcacaagtctgagtctggcctatggcctatcataggcc--gttttctaggcctgacctggcctatt 47367493  T
Q  439 taaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  47367492 taaaagtctggactggcctgaaagcctacttacaggcct 47367454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 339 - 412
Target Start/End: Complemental strand, 7109676 - 7109603
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    |||||||||| |||||| ||||||||||||||||||||||| |||| | ||||||||| ||||||||| |||||    
T  7109676 ctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcttggcctatggcctttcataagccta 7109603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 477
Target Start/End: Original strand, 12298142 - 12298302
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||||||  ||||||||| |||||  ||||||||||||||| |  || | |||| ||||||| ||| ||| |||||||||         
T  12298142 ggaataggccaggccaggctaggttttgataggcctgagtctggcctacgaaaaaaatcacaagcctgagcctggccaatggcctatcataggccg-ttt 12298240  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         ||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||||    
T  12298241 ttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcct 12298302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 477
Target Start/End: Complemental strand, 15322014 - 15321854
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    |||||||||||| |||||| || |||||||||| |||||| |||||||||||||||||| || | |||| |||||| | || ||| | |||||||         
T  15322014 ggaataggccaggtcaggccaggctttgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctggcatgtggcctattataggcc-gttt 15321916  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         || |||||||| ||||||||||||||||| || | ||||||||||| ||||||||||    
T  15321915 ttcttggtctggcctgacctatttaaaagtctggactagtctgaaagcctacttacaggcct 15321854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 330 - 477
Target Start/End: Complemental strand, 27090923 - 27090777
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||| ||||||||||||| |||||| |||||||||||| || |  || |||||| |||| |||||||||| ||||||||| |        ||| ||| |    
T  27090923 caggccagactttgataggcctgagcctggcctacgaaataaatcacatgtctgagcctgacctatgacctatcataggcc-atttttctaggcttggtc 27090825  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    || |||||||||||| |||| || ||||||||||||| ||||||||||    
T  27090824 tggcctatttaaaagcctggactagcctgaaagcctacttacaggcct 27090777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 433 - 492
Target Start/End: Complemental strand, 32239311 - 32239252
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||    
T  32239311 cctatttaaaagtctggcttggcctgaaagactatttacaggcctacttactattaaagt 32239252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 7109592 - 7109546
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  7109592 ctggtctggcctgaaagcctatttacaggcctacttactattaaagt 7109546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 446 - 492
Target Start/End: Original strand, 18353208 - 18353254
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  18353208 ctggtctggcctgaaagcctatttacaggcctacttactattaaagt 18353254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 477
Target Start/End: Original strand, 18342566 - 18342726
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||| | |||||||||||||  ||||| |||||||||||| || |  || | |||| ||||||||||| ||| |||||||||         
T  18342566 ggaataggccagaccagaccagactttgataggcttgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccg-ttt 18342664  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         |||||| |||| ||||||||||||||||| |||||||||||||||| ||||| ||||    
T  18342665 ttctaggcctgtcctggcctatttaaaagtctggactggcctgaaagcctacttacaagcct 18342726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 472
Target Start/End: Complemental strand, 34050111 - 34049968
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcata--ggcctannnnnnnnggcctgg 427  Q
    ||||| |||||||||||||| ||||| |||||||||||||||||| || | |||| |||||||| || ||| | |||  ||||          |||||||    
T  34050111 caggccagactttgataggtttgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattatataggccg-ttttttttggcctgg 34050013  T
Q  428 cctgccctatttaaaagtctggtctggcctgaaagcctatttaca 472  Q
    |||| ||||||||||||||||| |||||||||||||||| |||||    
T  34050012 cctgacctatttaaaagtctggactggcctgaaagcctacttaca 34049968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 29523078 - 29523022
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||| ||| ||||||||||||||||| |||||||||||||||| ||||||||||    
T  29523078 ggcctggtctggcctatttaaaagtctggactggcctgaaagcctacttacaggcct 29523022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 38672144 - 38672088
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||||    
T  38672144 ggcctggcctgacctatttaaaagcctggactggcctgaaagcctacttacaggcct 38672088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 433 - 492
Target Start/End: Complemental strand, 31225584 - 31225525
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||||| ||| |||||||||||||||||||||| || | ||||||||||||||    
T  31225584 cctatttaaaagtttggcctggcctgaaagcctatttacaagcatacttactattaaagt 31225525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 474
Target Start/End: Original strand, 15849821 - 15849978
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||| ||  ||||||||| |||||  |||||||||||| || |  || | |||| ||||||||||||||| || |||||| |       
T  15849821 ggaataggccaggccaggccaggatttgataggcctgagtctggcctacgaaataaatcacaagcctgagcctggcctatgacctatcctaggcc-attt 15849919  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacagg 474  Q
         || |||||||| |||||||||||| |||| |||||||||||||||| |||||||    
T  15849920 ttctaggtctggcctgacctatttaaaagcctggactggcctgaaagcctacttacagg 15849978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 477
Target Start/End: Complemental strand, 5500076 - 5499916
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||| || |||||||||| |||||| |||||||||||| || |  || | |||| |||||| |||| ||| ||||| |||         
T  5500076 ggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcttatggcctatcataagccg-ttt 5499978  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         |||||||| || |||||||||||| |||| |||||||||||||||| ||||||||||    
T  5499977 ttctaggcctggcttggcctatttaaaagcctggactggcctgaaagcctacttacaggcct 5499916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 395
Target Start/End: Original strand, 3831542 - 3831598
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctat 395  Q
    |||||||||| || ||| ||||||||||||||||||||||| |||| ||||||||||    
T  3831542 ctttgataggcctaagcctggcctacgaaaaaatttgcaggcctgagcctggcctat 3831598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 5506913 - 5506857
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||| ||||| ||||    
T  5506913 ggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaagcct 5506857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 17386322 - 17386266
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||| |||||||||||| |||| ||||| |||||||||| ||||||||||    
T  17386322 ggcctggcctgacctatttaaaagcctggactggcttgaaagcctacttacaggcct 17386266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 412
Target Start/End: Complemental strand, 32239412 - 32239308
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    |||||||||||||||| |||  ||||| ||  ||||||||| |||||| | ||||| ||||   |||||||  |||| ||||||||||| ||||||||||    
T  32239412 tagggttaggaataggtcaggccaggccaggttttgataggcctgagcctagcctatgaaattttttgcagtcctgagcctggcctatggcctttcatag 32239313  T
Q  408 gccta 412  Q
    |||||    
T  32239312 gccta 32239308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 410
Target Start/End: Original strand, 19507053 - 19507159
Alignment:
Q  304 caaatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttc 403  Q
    ||||||||| | |||||||| |||  ||| | || |||||||||| |||||| |||||||||||| || || || | |||| |||| |||||||||| ||    
T  19507053 caaataggggtgggaataggtcaggccagaccaggctttgataggcctgagcctggcctacgaaataaattacaagcctgagcctgacctatgacctatc 19507152  T
Q  404 ataggcc 410  Q
    |||||||    
T  19507153 ataggcc 19507159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 410
Target Start/End: Original strand, 44912605 - 44912699
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcc 410  Q
    |||||||| ||| |||||| ||||||||||||| |||||  || ||||||||| || |  || | |||| ||||||||||||||| |||||||||    
T  44912605 ggaataggtcaggtcaggccagactttgataggcctgagtctgacctacgaaataaatcacaagcctgagcctggcctatgacctatcataggcc 44912699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 23555861 - 23555914
Alignment:
Q  424 ctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||||| |||||||||||| |||| ||||||| |||||||| ||||||||||    
T  23555861 ctggcctgacctatttaaaagcctggactggcctaaaagcctacttacaggcct 23555914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 477
Target Start/End: Original strand, 16452509 - 16452553
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||    
T  16452509 cctatttaaaagtttggactggcctgaaagcctacttacaggcct 16452553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 477
Target Start/End: Original strand, 16461661 - 16461705
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||    
T  16461661 cctatttaaaagtttggactggcctgaaagcctacttacaggcct 16461705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 492
Target Start/End: Original strand, 34084083 - 34084130
Alignment:
Q  445 tctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||| || |||| ||||||||||||||||||| ||||||||||||||    
T  34084083 tctggcctagcctaaaagcctatttacaggcctacttactattaaagt 34084130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 458 - 492
Target Start/End: Original strand, 24038373 - 24038407
Alignment:
Q  458 gaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||||||||||||||| ||||||||||||||    
T  24038373 gaaagcctatttacaggcctacttactattaaagt 24038407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 490
Target Start/End: Original strand, 18437243 - 18437280
Alignment:
Q  453 ggcctgaaagcctatttacaggccttcttactattaaa 490  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  18437243 ggcctgtaagcctatttacaggcctacttactattaaa 18437280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 490
Target Start/End: Original strand, 18448100 - 18448137
Alignment:
Q  453 ggcctgaaagcctatttacaggccttcttactattaaa 490  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  18448100 ggcctgtaagcctatttacaggcctacttactattaaa 18448137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 490
Target Start/End: Original strand, 18453193 - 18453230
Alignment:
Q  453 ggcctgaaagcctatttacaggccttcttactattaaa 490  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  18453193 ggcctgtaagcctatttacaggcctacttactattaaa 18453230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 26257505 - 26257558
Alignment:
Q  424 ctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||| ||| |||||||||||| |||| |||| ||||||||||| ||||||||||    
T  26257505 ctggtctgacctatttaaaagcctggactggtctgaaagcctacttacaggcct 26257558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 394
Target Start/End: Complemental strand, 45372870 - 45372786
Alignment:
Q  307 atagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggccta 394  Q
    |||| ||| |||||||| |||  ||||| || |||| ||||| |||||| |||||   |||||||||||||||||||| |||||||||    
T  45372870 atagtgttgggaataggtcaggccaggccaggcttttataggcctgagcatggcc---gaaaaaatttgcaggtctgagcctggccta 45372786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 477
Target Start/End: Original strand, 5616606 - 5616662
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||| ||| ||||||||||||||||| ||||| | |||||||| ||||| ||||    
T  5616606 ggcctggtctgacctatttaaaagtctggactggcttaaaagcctacttacaagcct 5616662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 2e-44; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 4049565 - 4049382
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| |||||||| |||  ||||| | ||||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  4049565 tagggttgggaataggtcaggccaggccacactttgataggtctgagtttgacctacgaaaaaatttgcaggcctgagcctggcctatgacctttcatag 4049466  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
     ||||        ||||||  ||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  4049465 accta-tttttttggcctgatctggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagt 4049382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 31271557 - 31271374
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| || ||| ||||||||||||||||||| ||| |||| ||||||||||| ||||||||||    
T  31271557 tagggttgggaataggccaggccaggccaggctttgataggcctaagcctggcctacgaaaaaatttgtaggcctgagcctggcctatggcctttcatag 31271458  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        || |||||||  ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  31271457 gccta-tttttttggactggcctagcctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagt 31271374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 42062430 - 42062247
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||   |||||||| |||| ||||||||||| |||||||||     
T  42062430 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcataa 42062331  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  42062330 gcctattttttt-ggcctggcctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 42062247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 308 - 471
Target Start/End: Complemental strand, 6644281 - 6644119
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||| | || |||| ||||| |||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  6644281 tagggttgggaataggccagaccagaccaggctttaataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 6644182  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttac 471  Q
    |||||        ||||||||||| |||||||||||| |||  ||| |||||||||||||||||    
T  6644181 gccta-tttttttggcctggcctgacctatttaaaagcctgacctgacctgaaagcctatttac 6644119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 311 - 493
Target Start/End: Original strand, 4101180 - 4101363
Alignment:
Q  311 ggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcc 410  Q
    |||| |||||||||||| |||||| || |||||||||| |||||  || ||||||||||| |||||||| |||| |||| |||||| |||||||||||||    
T  4101180 ggttgggaataggccaggtcaggccaggctttgataggcctgagtctgacctacgaaaaattttgcaggcctgagcctgacctatggcctttcataggcc 4101279  T
Q  411 ta-nnnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagtt 493  Q
    ||         ||  ||| ||  |||||||||||| |||| |||||||||||||||||||||| |||| |||||||||||||||    
T  4101280 tatttttttttggattggtctagcctatttaaaagcctggcctggcctgaaagcctatttacaagcctacttactattaaagtt 4101363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 318 - 412
Target Start/End: Original strand, 12880469 - 12880563
Alignment:
Q  318 aataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    ||||||||||  ||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  12880469 aataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatgacctttcataggccta 12880563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 330 - 492
Target Start/End: Complemental strand, 42288604 - 42288448
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcc 429  Q
    ||||| || |||||||||| |||||  ||||||||||||||| ||||||| |||| ||||||||||| |||||||||| ||||            |||||    
T  42288604 caggccaggctttgataggcctgagtctggcctacgaaaaaaattgcaggcctgagcctggcctatggcctttcatagacctatttttt------tggcc 42288511  T
Q  430 tgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |  |||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  42288510 tcgcctatttaaaagtctggtctggtctgaaaacctatttacaggcctacttactattaaagt 42288448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 308 - 412
Target Start/End: Original strand, 7078990 - 7079094
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||| |||||| |||||| || ||||||||||  ||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  7078990 tagggttgggaatgggccaggtcaggccaggctttgataggcttgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 7079089  T
Q  408 gccta 412  Q
    |||||    
T  7079090 gccta 7079094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 412
Target Start/End: Original strand, 7035162 - 7035266
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| |||||| || || |||||  || ||||||||||||||||  ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  7035162 tagggttgggaatatgctaggtcaggtcaggctttgataggtctgagtctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 7035261  T
Q  408 gccta 412  Q
    |||||    
T  7035262 gccta 7035266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 412
Target Start/End: Original strand, 9163428 - 9163532
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||||||||||  |||||||| |||| ||||||||||| ||||||||||    
T  9163428 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcatag 9163527  T
Q  408 gccta 412  Q
    |||||    
T  9163528 gccta 9163532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 421 - 492
Target Start/End: Original strand, 491341 - 491412
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||| |||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||||    
T  491341 ggcctggcctggcctatttaaaagcctgacctggcctgaaagcctatttacaggcctacttactattaaagt 491412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 477
Target Start/End: Original strand, 18158378 - 18158546
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| |||||||| |||  ||||| || |||||||||| |||||| |||||||||||| || |  || | |||| ||||||||||| ||| ||||||    
T  18158378 tagggttgggaataggtcaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 18158477  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||          ||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||||    
T  18158478 gccg-tttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcct 18158546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 308 - 396
Target Start/End: Original strand, 491253 - 491341
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatg 396  Q
    ||||||| ||||||||||||  ||||| || |||||||||| || ||| ||||||||||||||||||||||| |||| |||||||||||    
T  491253 tagggttgggaataggccaggccaggccaggctttgataggcctaagcctggcctacgaaaaaatttgcaggcctgagcctggcctatg 491341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 477
Target Start/End: Original strand, 10017771 - 10017931
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||| || |||||||||| |||||| |||||||||||||||||| || | |||| |||||||| ||  || | |||| ||         
T  10017771 ggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggtctattatagaccg-ttt 10017869  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         ||||||||||| |||||||||||| |||| |||||||||||||||||||||| ||||    
T  10017870 ttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctatttacatgcct 10017931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 477
Target Start/End: Complemental strand, 14949640 - 14949480
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    |||||||| |||  ||||| || ||||||||||||||||| |||||||||||||||||| || | |||| |||||||| || ||| | |||||||         
T  14949640 ggaataggtcaggccaggccaggctttgataggtctgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattataggcc-gttt 14949542  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         ||||||| ||| ||||||||||||||||| ||| |||||||||||| ||||| ||||    
T  14949541 ttcttggcctggtctgacctatttaaaagtctggactgacctgaaagcctacttacatgcct 14949480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 477
Target Start/End: Original strand, 40083983 - 40084151
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||||||||| || |  || | |||| ||||||||||| ||| ||||||    
T  40083983 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 40084082  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||          |||||||||||  ||||||||||| ||||  ||||||||||||||| ||||||||||    
T  40084083 gcc-gtttttctaggcctggcctggtctatttaaaagcctggattggcctgaaagcctacttacaggcct 40084151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 444 - 492
Target Start/End: Original strand, 7035275 - 7035323
Alignment:
Q  444 gtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7035275 gtctggtctggcctgaaagcctatttacaggcctacttactattaaagt 7035323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 412
Target Start/End: Original strand, 10931618 - 10931722
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| |||||||||| | |||||| ||| ||||||||| |||||  |||||||||||||||||||||||  ||| | ||||||| | ||||| ||||    
T  10931618 tagggttgggaataggcctggtcaggccagattttgataggcctgagtctggcctacgaaaaaatttgcaggcatgagcttggcctagggccttttatag 10931717  T
Q  408 gccta 412  Q
    |||||    
T  10931718 gccta 10931722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 446 - 492
Target Start/End: Original strand, 7079105 - 7079151
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  7079105 ctggtctggcctgaaagcctatttacaggcctacttactattaaagt 7079151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 477
Target Start/End: Original strand, 34855346 - 34855483
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatt 438  Q
    ||||||||||  ||||| |||||||||||||||||| || | |||| |||||||| || ||| | |||||| |         ||||||||||| ||||||    
T  34855346 ctttgataggcttgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattataggc-tgtttttcttggcctggcctgacctatt 34855444  T
Q  439 taaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||| |||| |||||||||||||||| ||||||||||    
T  34855445 taaaagcctggactggcctgaaagcctacttacaggcct 34855483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 492
Target Start/End: Complemental strand, 12725054 - 12724873
Alignment:
Q  305 aaatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttca 404  Q
    |||||||||| |||||||| |||   || | || ||||||||||||||||||||| |||||||  | |||  | | |||| |||| |||||| |||||||    
T  12725054 aaatagggttgggaataggtcaggctagaccaggctttgataggtctgagcttggtctacgaattattttttaagcctgagcctgacctatggcctttca 12724955  T
Q  405 taggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||             || ||| ||||| ||||||||||||||||||||||||||||||||||||| | |||| ||| |||||    
T  12724954 taggcctacttttta------ggtctggcctatctaaaagtctggtctggcctgaaagcctatttacaggcatacttattataaaagt 12724873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 421 - 476
Target Start/End: Complemental strand, 13916782 - 13916727
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcc 476  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||| ||| |||||    
T  13916782 ggcctggcctgacctatttaaaagtctggactggcctgaaagcctacttataggcc 13916727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 32298633 - 32298587
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  32298633 ctggtctagcctgaaagcctatttacaggcctacttactattaaagt 32298587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 410
Target Start/End: Original strand, 38254701 - 38254795
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcc 410  Q
    ||||||||||||  ||||| ||||||||||||| |||||| |||||||||||  || |  || |||||| ||||||||||| ||| |||||||||    
T  38254701 ggaataggccaggccaggccagactttgataggcctgagcctggcctacgaagtaaatcacaagtctgagcctggcctatggcctatcataggcc 38254795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 447 - 492
Target Start/End: Original strand, 10931729 - 10931774
Alignment:
Q  447 tggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||||||||||||||||||||||| || ||||||||||||||    
T  10931729 tggtctggcctgaaagcctatttacaggtctgcttactattaaagt 10931774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 18295292 - 18295345
Alignment:
Q  424 ctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||||| |||||||||||||||||  ||||||||||||||| ||||||||||    
T  18295292 ctggcctgacctatttaaaagtctggattggcctgaaagcctacttacaggcct 18295345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 482
Target Start/End: Complemental strand, 28210311 - 28210262
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacaggccttctta 482  Q
    ||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  28210311 cctatttaaaagtctggactggcctgaaagcctaattacaggcctactta 28210262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 466
Target Start/End: Complemental strand, 27332623 - 27332464
Alignment:
Q  306 aatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcat 405  Q
    ||||||||| ||||||||||||  ||| | || |||||| | | |||||| |||||||||||||| | | || | || | ||||||||||| ||| ||||    
T  27332623 aatagggttgggaataggccaggccagaccaggctttgaaatgcctgagcctggcctacgaaaaattatacaagcctaagcctggcctatggcctatcat 27332524  T
Q  406 aggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagccta 466  Q
    ||||||         |||||| |||| |||||| ||||| |||||||||||||||||||||    
T  27332523 aggcct-tttttcttggcctgacctggcctattaaaaagcctggtctggcctgaaagccta 27332464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 424 - 471
Target Start/End: Complemental strand, 14084466 - 14084419
Alignment:
Q  424 ctggcctgccctatttaaaagtctggtctggcctgaaagcctatttac 471  Q
    |||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  14084466 ctggtctggcctatttaaaagtctggtctggcctgaaagcctacttac 14084419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 492
Target Start/End: Original strand, 12880579 - 12880625
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||    
T  12880579 ctggcctggcctgaaagcctatttagaggcctacttactattaaagt 12880625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 3881083 - 3881027
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||| |||| |||||||||||| |||| |||||||||||||||| ||||| ||||    
T  3881083 ggcctgacctgacctatttaaaagcctggactggcctgaaagcctacttacaagcct 3881027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 473
Target Start/End: Complemental strand, 12786415 - 12786375
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacag 473  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  12786415 cctatctaaaagtctggtctagcctgaaagcctatttacag 12786375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 15397565 - 15397617
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaa 368  Q
    |||||||| |||  ||||| |||||||||||||||||||| ||||||||||||    
T  15397565 ggaataggtcaggccaggccagactttgataggtctgagcctggcctacgaaa 15397617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 477
Target Start/End: Complemental strand, 27054509 - 27054453
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||| ||| |||||||||||| |||| ||| |||||||||||| ||||||||||    
T  27054509 ggcctggtctggcctatttaaaagcctggactgacctgaaagcctacttacaggcct 27054453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 475
Target Start/End: Complemental strand, 15678186 - 15678135
Alignment:
Q  424 ctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggc 475  Q
    |||||||| ||||||||||||| ||| || ||||||||||||| ||||||||    
T  15678186 ctggcctggcctatttaaaagtttggactagcctgaaagcctacttacaggc 15678135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 477
Target Start/End: Complemental strand, 17870053 - 17870002
Alignment:
Q  426 ggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||| |||||||||||| |||| ||||||| |||||||| ||||||||||    
T  17870053 ggcctgacctatttaaaagcctggactggcctaaaagcctacttacaggcct 17870002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 421 - 463
Target Start/End: Original strand, 858753 - 858795
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagc 463  Q
    ||||||||||| |||||| ||||||||||||| ||||||||||    
T  858753 ggcctggcctggcctattaaaaagtctggtctagcctgaaagc 858795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 410
Target Start/End: Original strand, 11877462 - 11877564
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| |||||||| |||  ||||| || |||||||||| |||||| |||||||||||| || |  || | |||| |||| |||||| ||| ||||||    
T  11877462 tagggttgggaataggtcaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctgacctatggcctatcatag 11877561  T
Q  408 gcc 410  Q
    |||    
T  11877562 gcc 11877564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 367
Target Start/End: Complemental strand, 12786537 - 12786475
Alignment:
Q  305 aaatagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaa 367  Q
    ||||| |||| |||||||| ||| |||| | || ||||||||||||||||||||| |||||||    
T  12786537 aaataaggttgggaataggtcaggtcagaccaggctttgataggtctgagcttggtctacgaa 12786475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 482
Target Start/End: Original strand, 370280 - 370329
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacaggccttctta 482  Q
    |||||||||||| |||| |||||||||||| ||| |||||||||| ||||    
T  370280 cctatttaaaagcctggactggcctgaaagtctaattacaggcctactta 370329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 368
Target Start/End: Original strand, 18295183 - 18295244
Alignment:
Q  307 atagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaa 368  Q
    |||||| |||||||||| ||| |||||| |||||||||||||  ||||  ||||||||||||    
T  18295183 ataggggtaggaataggtcaggtcaggccagactttgataggcttgagtctggcctacgaaa 18295244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 32298714 - 32298666
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcagg 379  Q
    ||||| || ||||||||||||||||| |||||||||| ||||||||||||    
T  32298714 caggccaggctttgataggtctgagcctggcctacga-aaaatttgcagg 32298666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 477
Target Start/End: Original strand, 17468053 - 17468097
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||||||||||||  |||||| |||||||||||||| ||||||    
T  17468053 cctatttaaaagtctattctggcttgaaagcctatttataggcct 17468097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 2e-44; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 12033948 - 12033766
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||| ||  ||||| ||||||||||||| |||||| |||||||| ||||| |||||||| |||| ||||||||||| ||||||||||    
T  12033948 tagggttgggaataggctaggccaggccagactttgataggcctgagcctggcctac-aaaaattttgcaggcctgagcctggcctatggcctttcatag 12033850  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12033849 gcctattttttt-ggcctggtctggcctatttaaaagtctggtctggcctgaaagcctatttacaggcctacttactattaaagt 12033766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 21198260 - 21198077
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  21198260 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 21198161  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||         |||||||||| |||||||||||| |||  ||||||| ||||||||||||||||||| ||||||||||||||    
T  21198160 gcctattttttta-gcctggcctggcctatttaaaagcctgacctggcctaaaagcctatttacaggcctacttactattaaagt 21198077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 34726449 - 34726266
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| |||||||||||||| ||| |||| |||| ||||||||||| ||||||||||    
T  34726449 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaattttacaggcctgagcctggcctatggcctttcatag 34726350  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||||||| |||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  34726349 gccta-ttattttggcctggcctgacctatttaaaagcctggcctgacctgaaagcctatttacaggcctacttactattaaagt 34726266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 339 - 492
Target Start/End: Original strand, 29557446 - 29557598
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatt 438  Q
    |||||||||| |||||| ||||||||||||||||||||||| |||| ||| ||||||| |||||||||||||||        ||| ||||||| ||||||    
T  29557446 ctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctagcctatggcctttcataggcctattttttt-ggcatggcctggcctatt 29557544  T
Q  439 taaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  29557545 taaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagt 29557598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 340 - 492
Target Start/End: Original strand, 38213428 - 38213579
Alignment:
Q  340 tttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctattt 439  Q
    ||||||||| |||||| |||||||| |||||||||||||| |||| ||||||||||| |||||||||||||||        ||||||||||| |||||||    
T  38213428 tttgataggcctgagcctggcctacaaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctattttttt-ggcctggcctgacctattt 38213526  T
Q  440 aaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||||||| ||| |||||||||||||||||||| || ||||||||||||||    
T  38213527 aaaagtctggcctgacctgaaagcctatttacaggtctacttactattaaagt 38213579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 308 - 477
Target Start/End: Original strand, 40737800 - 40737968
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||   |||||||| |||| ||||||||||| ||||||||||    
T  40737800 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcatag 40737899  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||        ||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||    
T  40737900 gccta-tttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcct 40737968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 359 - 492
Target Start/End: Complemental strand, 18075854 - 18075722
Alignment:
Q  359 gcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctg 458  Q
    |||||||||||||||||||||  ||| | ||||||||| |||||||||| ||||        ||||||||||| ||||||||||||||||| ||||||||    
T  18075854 gcctacgaaaaaatttgcaggcttgagcttggcctatggcctttcatagacctattttttt-ggcctggcctgacctatttaaaagtctggcctggcctg 18075756  T
Q  459 aaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||||||||||| ||||||||||||||    
T  18075755 aaagcctatttacaggcctacttactattaaagt 18075722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 308 - 412
Target Start/End: Complemental strand, 13029230 - 13029126
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  13029230 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 13029131  T
Q  408 gccta 412  Q
    |||||    
T  13029130 gccta 13029126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 412
Target Start/End: Complemental strand, 32084238 - 32084134
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    |||||||  |||||||||||  ||||  ||||||||||||| |||||  ||||||||||||||||||||||| |||| |||| |||||| ||||||||||    
T  32084238 tagggttgagaataggccaggccagggcagactttgataggcctgagtctggcctacgaaaaaatttgcaggcctgagcctgacctatggcctttcatag 32084139  T
Q  408 gccta 412  Q
    |||||    
T  32084138 gccta 32084134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 433 - 492
Target Start/End: Original strand, 43616406 - 43616465
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  43616406 cctatttaaaagtctggcctggcctgaaagcctatttacaggcctacttactattaaagt 43616465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 36985504 - 36985416
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatg 396  Q
    ||||||| ||||||||||||  ||| | || |||||||||| |||||| ||||||||||||||||||||||| |||| |||||||||||    
T  36985504 tagggttgggaataggccaggccagaccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatg 36985416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 330 - 412
Target Start/End: Complemental strand, 5936873 - 5936791
Alignment:
Q  330 caggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    ||||| || |||||||||| | |||| ||||||||||||||||||| ||| |||| ||||||||||| |||||||||||||||    
T  5936873 caggccaggctttgataggcccgagcctggcctacgaaaaaatttgtaggcctgagcctggcctatggcctttcataggccta 5936791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 477
Target Start/End: Complemental strand, 2995159 - 2994999
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||| | ||||||||||||| |||||| |||||||||||| || |  || | |||| ||||||||||| ||| |||||||||         
T  2995159 ggaataggccaggccagaccagactttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccg-ttt 2995061  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
         ||||||||||| |||||||||||| |||| |||||||||||||||| ||||| ||||    
T  2995060 ttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaagcct 2994999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 412
Target Start/End: Complemental strand, 7592662 - 7592563
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| |||||||||||| |||||||     |||||| | |||||| |||||||||||||| |||||||| |||| | ||||||||| ||||||||||    
T  7592662 tagggttgggaataggccaggtcaggct-----ttgatacgcctgagcctggcctacgaaaaattttgcaggcctgagcatggcctatggcctttcatag 7592568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 412
Target Start/End: Original strand, 43616333 - 43616409
Alignment:
Q  336 agactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    ||||||||||||| |||||| |||||||||||||| |||||||| ||||  ||||| |||| |||||||||||||||    
T  43616333 agactttgataggcctgagcctggcctacgaaaaattttgcaggcctgagtctggcttatggcctttcataggccta 43616409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 410
Target Start/End: Complemental strand, 2182835 - 2182741
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcc 410  Q
    |||||||||||| |||||| ||||||||||||| |||||| |||||||||||| || |  || |||||| ||||||||||  ||| |||||||||    
T  2182835 ggaataggccaggtcaggccagactttgataggcctgagcctggcctacgaaataaatcacaagtctgagcctggcctatagcctatcataggcc 2182741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 477
Target Start/End: Complemental strand, 25879839 - 25879702
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatt 438  Q
    |||||||||  ||||||||||||||||||| || |  || | || | ||||||||||||||| |||||||||          ||||||||||| ||||||    
T  25879839 ctttgatagacctgagcttggcctacgaaataaatcacaagcctaagcctggcctatgacctatcataggccg-tttttctaggcctggcctggcctatt 25879741  T
Q  439 taaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||||||||  ||||||||||||||| ||||||||||    
T  25879740 taaaagtctggattggcctgaaagcctacttacaggcct 25879702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 410
Target Start/End: Complemental strand, 26260390 - 26260288
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| |||||||||||| |||||| || |||||||||| |||||| |||||||||||| || |  || | |||| ||||||||||| ||| ||||||    
T  26260390 tagggttgggaataggccaggtcaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 26260291  T
Q  408 gcc 410  Q
    |||    
T  26260290 gcc 26260288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 477
Target Start/End: Original strand, 35959328 - 35959497
Alignment:
Q  307 atagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcata 406  Q
    |||||| | ||||||||||||  ||||| |  |||||||||| |||||| |||||||||||||||||| || | |||| |||||||| || ||| | |||    
T  35959328 ataggggtgggaataggccaggccaggccaagctttgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattata 35959427  T
Q  407 ggcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||          || |||||||| |||||||||||| |||| ||| |||||||||||| ||||||||||    
T  35959428 ggcc-gtttttcttggtctggcctgacctatttaaaagcctggactgacctgaaagcctacttacaggcct 35959497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 444 - 492
Target Start/End: Complemental strand, 5936782 - 5936734
Alignment:
Q  444 gtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  5936782 gtctggcctggcctgaaagcctatttacaggcctacttactattaaagt 5936734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 477
Target Start/End: Original strand, 6283475 - 6283531
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||| ||||||||||||||||| ||| |||||||||||| ||||||||||    
T  6283475 ggcctggcctgacctatttaaaagtctggactgacctgaaagcctacttacaggcct 6283531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 316 - 408
Target Start/End: Complemental strand, 31452998 - 31452906
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatagg 408  Q
    |||||||||||| |||||| ||||||||||||| ||||| ||||||||||||| ||||| || |||| | | || |||||| ||| |||||||    
T  31452998 ggaataggccaggtcaggccagactttgataggcctgagtttggcctacgaaataatttacaagtctaagcatgacctatggcctatcatagg 31452906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 316 - 476
Target Start/End: Complemental strand, 44092924 - 44092765
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    ||||||||||||  ||||| ||  |||||||||||||||| |||||||||||| || |  || | |||| ||||||||||| ||| ||||||||| |       
T  44092924 ggaataggccaggccaggccaggttttgataggtctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggcc-attt 44092826  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcc 476  Q
         | ||||||||| |||||||||||| |||| || ||||||||||||| ||| |||||    
T  44092825 ttctagacctggcctggcctatttaaaagcctggacttgcctgaaagcctacttataggcc 44092765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 474
Target Start/End: Original strand, 6431524 - 6431681
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannn 415  Q
    |||||||| ||| |||||| || |||||||||| |||||| |||||||||||| || |  || | ||||  |||||||||| ||| |||||||||         
T  6431524 ggaataggtcaggtcaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagtctggcctatggcctatcataggccg-ttt 6431622  T
Q  416 nnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacagg 474  Q
         || |||||||| |||||||||||| |||| |||||||||||||||| |||||||    
T  6431623 ttctaggtctggcctggcctatttaaaagcctggactggcctgaaagcctacttacagg 6431681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 477
Target Start/End: Original strand, 2611305 - 2611445
Alignment:
Q  336 agactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccct 435  Q
    |||||||||||||||||||| || ||||||||| || |  || ||||||  |||||||||| ||| |||||||||          || |||| ||| |||    
T  2611305 agactttgataggtctgagcctgacctacgaaataaatcacaagtctgagtctggcctatggcctatcataggccg-tttttttaggtctggtctggcct 2611403  T
Q  436 atttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||| |||| |||||||||||||||| ||||||||||    
T  2611404 atttaaaagcctggactggcctgaaagcctacttacaggcct 2611445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 412
Target Start/End: Complemental strand, 17852871 - 17852771
Alignment:
Q  311 ggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcc 410  Q
    |||| ||||||||||||  ||||  ||||||||||||| |||||  |||||||| |||||| ||||||| |||| | ||| ||||| |||||||||||||    
T  17852871 ggttgggaataggccaggccaggtcagactttgataggcctgagtctggcctac-aaaaaaattgcaggcctgagcttggtctatggcctttcataggcc 17852773  T
Q  411 ta 412  Q
    ||    
T  17852772 ta 17852771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 492
Target Start/End: Original strand, 39133259 - 39133416
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatt 438  Q
    ||||||||||  ||||| ||| |||||||||  ||||||||  ||| ||||| ||||| |||||||||||||||        || |||| ||| |||| |    
T  39133259 ctttgataggcttgagcctggtctacgaaaatttttgcaggcttgagcctggtctatggcctttcataggcctattttgtt-ggtctggtctggcctact 39133357  T
Q  439 taaaagtctggtctggc-----ctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||| |||||     ||| |||||||||||||||||| ||||||||||||||    
T  39133358 taaaagtctggcctggcatggcctgcaagcctatttacaggcctacttactattaaagt 39133416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 412
Target Start/End: Complemental strand, 43999726 - 43999653
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    |||||||||  |||||| |||| || ||||||||||||||| |||| |||| |||||| |||||||||||||||    
T  43999726 ctttgatagacctgagcctggcttatgaaaaaatttgcaggcctgagcctgacctatggcctttcataggccta 43999653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 482
Target Start/End: Complemental strand, 1834357 - 1834297
Alignment:
Q  422 gcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttctta 482  Q
    ||||| |||| |||||||||||| |||| |||||||||||||||| |||||||||| ||||    
T  1834357 gcctgacctgacctatttaaaagcctggactggcctgaaagcctaattacaggcctactta 1834297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 410
Target Start/End: Complemental strand, 6420075 - 6419979
Alignment:
Q  314 taggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcc 410  Q
    |||||||||| |||  ||||| ||||||||||||| |||||| |||||||||||| || |  || |||||| ||||||||||| ||| || ||||||    
T  6420075 taggaataggtcaggccaggccagactttgataggcctgagcctggcctacgaaataaatcacaagtctgagcctggcctatggcctatcgtaggcc 6419979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 477
Target Start/End: Original strand, 29768401 - 29768457
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||| ||||| ||||    
T  29768401 ggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacatgcct 29768457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 477
Target Start/End: Original strand, 42077061 - 42077117
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    ||||||| ||| ||||||||||||||||| |||| ||||||||||| ||||||||||    
T  42077061 ggcctggtctggcctatttaaaagtctggactggtctgaaagcctacttacaggcct 42077117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 13029115 - 13029069
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||| ||||||||||||||||||||||||||| |||||||| |||||    
T  13029115 ctggcctggcctgaaagcctatttacaggcctacttactatcaaagt 13029069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 421 - 474
Target Start/End: Original strand, 29044210 - 29044263
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacagg 474  Q
    |||||| |||| |||||||||||| |||| |||||||||||||||| |||||||    
T  29044210 ggcctgacctggcctatttaaaagcctggactggcctgaaagcctacttacagg 29044263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 394
Target Start/End: Original strand, 6283331 - 6283418
Alignment:
Q  307 atagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggccta 394  Q
    |||||| | |||||||| |||  ||||| |||||||||||||  ||||  |||||||||||||||||| || | |||| |||||||||    
T  6283331 ataggggtgggaataggtcaggccaggccagactttgataggcttgagtctggcctacgaaaaaatttacaagcctgagcctggccta 6283418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 26160427 - 26160478
Alignment:
Q  317 gaataggccagctcaggctagactttgataggtctgagcttggcctacgaaa 368  Q
    ||||||||||| |||| | |||||||||||||||||||  ||||||||||||    
T  26160427 gaataggccagatcagaccagactttgataggtctgagtctggcctacgaaa 26160478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 36983272 - 36983226
Alignment:
Q  446 ctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||| |||||||||||||||||||||| ||||  |||||||||||||    
T  36983272 ctggcctggcctgaaagcctatttacaagcctatttactattaaagt 36983226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 477
Target Start/End: Original strand, 7298953 - 7298994
Alignment:
Q  436 atttaaaagtctggtctggcctgaaagcctatttacaggcct 477  Q
    |||||||||||||| |||||||||||||||| ||||| ||||    
T  7298953 atttaaaagtctggactggcctgaaagcctacttacaagcct 7298994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 15899714 - 15899673
Alignment:
Q  425 tggcctgccctatttaaaagtctggtctggcctgaaagccta 466  Q
    ||||||| | ||||||||||||||||||| ||||||||||||    
T  15899714 tggcctgacttatttaaaagtctggtctgacctgaaagccta 15899673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 493
Target Start/End: Complemental strand, 17852757 - 17852708
Alignment:
Q  444 gtctggtctggcctgaaagcctatttacaggccttcttactattaaagtt 493  Q
    |||||| ||| |||||||| |||||||||||||| |||||| ||||||||    
T  17852757 gtctggcctgacctgaaagtctatttacaggcctacttactcttaaagtt 17852708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 492
Target Start/End: Complemental strand, 32084123 - 32084082
Alignment:
Q  451 ctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||| ||||||||||||||||||| || ||||||||||||||    
T  32084123 ctggtctgaaagcctatttacaggtctacttactattaaagt 32084082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 29044113 - 29044165
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaa 368  Q
    ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||    
T  29044113 ggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaa 29044165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 38448156 - 38448096
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaa 368  Q
    |||||||  |||||||||||  ||||| || |||||||||| |||||| ||||||||||||    
T  38448156 tagggttgagaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaa 38448096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 308 - 492
Target Start/End: Original strand, 40900 - 41083
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||| || |||||||||| |||||| ||||||||||||   |||||||| |||| ||||||||||| ||||||||||    
T  40900 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcatag 40999  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  41000 gcctattttttt-ggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctacttactattaaagt 41083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 308 - 492
Target Start/End: Original strand, 39974 - 40158
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| ||||||||||||  ||||  || ||||||||||  ||||| ||||||||||||||| ||||||| |||| ||||||||||| ||||||||||    
T  39974 tagggttgggaataggccagaccaggtcaggctttgataggcttgagcctggcctacgaaaaaaattgcaggcctgagcctggcctatggcctttcatag 40073  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctg-aaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||| ||||||| |||||||||||| |||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  40074 gccta-tttttttggcatggcctgacctatttaaaagcctggcctggcctgaaaagcctatttacaggcctacttactattaaagt 40158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 492
Target Start/End: Complemental strand, 14463 - 14281
Alignment:
Q  308 tagggttaggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcatag 407  Q
    ||||||| |||||||||||| |||||| || |||||||||| |||||  |||||||||||||  |||||||| |||| |||| |||||| ||||||||||    
T  14463 tagggttgggaataggccaggtcaggccaggctttgataggcctgagtctggcctacgaaaatttttgcaggcctgagcctgccctatgtcctttcatag 14364  T
Q  408 gcctannnnnnnnggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    |||||        ||||||||||| |||||||||||  |||||||| |||||||||||| |||||||||| ||||||||||||||    
T  14363 gccta-tttttttggcctggcctggcctatttaaaa-cctggtctgacctgaaagcctaattacaggcctacttactattaaagt 14281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 368 - 492
Target Start/End: Original strand, 15625 - 15750
Alignment:
Q  368 aaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnn-ggcctggcctgccctatttaaaagtctggtctggcctgaaagccta 466  Q
    |||||||||||| |||| ||||||||||| |||||||||||||||         ||| ||||||| |||||||||||| |||| ||||||||||||||||    
T  15625 aaaatttgcagggctgagcctggcctatggcctttcataggcctatttttttttggcttggcctggcctatttaaaagcctggcctggcctgaaagccta 15724  T
Q  467 tttacaggccttcttactattaaagt 492  Q
    ||||||||||| ||||||||||||||    
T  15725 tttacaggcctacttactattaaagt 15750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 1880 - 1754
Alignment:
Q  339 ctttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcctannnnnnnnggcctggcctgccctatt 438  Q
    |||||||||| |||||| |||||||||||||||||| |||| |||| ||||||||||| ||| |||||||||          |||||| |||| ||||||    
T  1880 ctttgataggcctgagcctggcctacgaaaaaatttacaggcctgagcctggcctatggcctatcataggcc-gtttttttaggcctgacctggcctatt 1782  T
Q  439 taaaagtctggtctggcctgaaagccta 466  Q
    |||||| |||| ||||||||||||||||    
T  1781 taaaagcctggactggcctgaaagccta 1754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 433 - 491
Target Start/End: Original strand, 24901 - 24959
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaag 491  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||    
T  24901 cctatttaaaagcctggtctgacctgaaagcctatttacaggcctacttactattaaag 24959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 433 - 492
Target Start/End: Complemental strand, 218272 - 218213
Alignment:
Q  433 cctatttaaaagtctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||    
T  218272 cctatttaaaagtctggcctggcctgaaagcctatttacaggcttatttactattaaagt 218213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1625 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold1625
Description:

Target: scaffold1625; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 412
Target Start/End: Original strand, 1232 - 1315
Alignment:
Q  329 tcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggccta 412  Q
    |||||| || ||||||||||||||||| ||||||||| ||   |||||||| | || ||||||||||| |||||||||||||||    
T  1232 tcaggccaggctttgataggtctgagcctggcctacggaattttttgcaggccagagcctggcctatggcctttcataggccta 1315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1625; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 445 - 492
Target Start/End: Original strand, 1325 - 1372
Alignment:
Q  445 tctggtctggcctgaaagcctatttacaggccttcttactattaaagt 492  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  1325 tctggcctggcctgaaagcctatttacaggcctacttactattaaagt 1372  T

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Target: scaffold0422 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 473
Target Start/End: Original strand, 10719 - 10771
Alignment:
Q  421 ggcctggcctgccctatttaaaagtctggtctggcctgaaagcctatttacag 473  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||| ||||||    
T  10719 ggcctggcctgacctatttaaaagcctggactggcctgaaagcctacttacag 10771  T

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Target: scaffold0275 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 410
Target Start/End: Original strand, 9159 - 9253
Alignment:
Q  316 ggaataggccagctcaggctagactttgataggtctgagcttggcctacgaaaaaatttgcaggtctgaacctggcctatgacctttcataggcc 410  Q
    ||||||||||||  ||| | || |||||||||| |||||| |||||||| ||| || |  || | |||| ||||||||||||||| |||||||||    
T  9159 ggaataggccaggccagaccaggctttgataggcctgagcctggcctacaaaataaatcacaagcctgagcctggcctatgacctatcataggcc 9253  T

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