View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7700_low_13 (Length: 240)
Name: NF7700_low_13
Description: NF7700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7700_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 49700112 - 49700333
Alignment:
| Q |
1 |
tgagaaaactatgcacttaattgcggtgataggttctatatttggtatttcatttctttctatgatgttaattaatatttggatattttctttttggatt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49700112 |
tgagaaaactatgcacttaattgcggtgataggttctatatttggtatttcatttctttctatgatgttaattaatatttggatattttctttttggatt |
49700211 |
T |
|
| Q |
101 |
tgtgatatatcagaggtacacagtacaagctgccgcaaattttgcccgccggaataagatacctatccacttggaagaacagatgctttctcatttgttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49700212 |
tgtgatatatcagaggtacacagtacaagctgccgcaaattttgcccgccggaataagatacctatccacttggaagaacagatgctttctcatttgttc |
49700311 |
T |
|
| Q |
201 |
atgaagtaccgaaccgatttgg |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
49700312 |
atgaagtaccgaaccgatttgg |
49700333 |
T |
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