View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7701_low_13 (Length: 262)
Name: NF7701_low_13
Description: NF7701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7701_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 30000182 - 29999982
Alignment:
| Q |
18 |
cactccaatgacaatcgtcaaggatagaagaatatccataaactgatataaggaggccacatgtaaaagtatgcagacaaaataaccatcactaagatgc |
117 |
Q |
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| T |
30000182 |
cactccaatgacaaccgtcaaggatagaa---tatccataaattgatataaggaggccacatgtaaaagtatgtagacaaaataaccatcactaagatgc |
30000086 |
T |
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| Q |
118 |
aaacatgtatagatcatggagtaggaatccgagatcgccaaaacctgaaaagaaatataaaagtcctgagaggggagtaacaaagatgatagaagaggta |
217 |
Q |
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||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30000085 |
aaacatgtataaaccatggagtaggaatccgagatcgccaaaacctgaaaagaaatataaaagtcctgagaggggagtaacaaagatgatagaagaggta |
29999986 |
T |
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| Q |
218 |
ggat |
221 |
Q |
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|||| |
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| T |
29999985 |
ggat |
29999982 |
T |
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