View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7703_high_3 (Length: 692)
Name: NF7703_high_3
Description: NF7703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7703_high_3 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 666; Significance: 0; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 666; E-Value: 0
Query Start/End: Original strand, 17 - 686
Target Start/End: Complemental strand, 23597206 - 23596537
Alignment:
| Q |
17 |
attaacacagtcatgactcctcctgcagtctccaaaccaagggaaagaggagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgc |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23597206 |
attaacacagtcatgactcctcctgcagtctccaaaccaagggaaagaggagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgc |
23597107 |
T |
|
| Q |
117 |
tcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttg |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23597106 |
tcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttg |
23597007 |
T |
|
| Q |
217 |
ttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctcc |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23597006 |
ttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatcaacactgttcttatccatcttagcatccctcaaacacttctcaacaggctcc |
23596907 |
T |
|
| Q |
317 |
atacacttcctaaatagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatgg |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596906 |
atacacttcctaaatagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatgg |
23596807 |
T |
|
| Q |
417 |
tggtttgagcagtagaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattctt |
516 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596806 |
tggtttgagcagtagaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattctt |
23596707 |
T |
|
| Q |
517 |
cctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagatacct |
616 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596706 |
cctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagatacct |
23596607 |
T |
|
| Q |
617 |
tcctcaatagtaagaagtgaaacatcaaaagttccaccaccaagatcgaaaataagaacgttcttctcac |
686 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23596606 |
tcctcaatagtaagaagtgaaacatcaaaagttccaccaccaagatcgaaaataagaacgttcttctcac |
23596537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 544; E-Value: 0
Query Start/End: Original strand, 23 - 686
Target Start/End: Complemental strand, 23588348 - 23587685
Alignment:
| Q |
23 |
acagtcatgactcctcctgcagtctccaaaccaagggaaagaggagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaa |
122 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| || || ||||||| |
|
|
| T |
23588348 |
acagtcatgacacctcctgcggtctccaaaccaagggagagaggagtaacatccagcaacaacagatcctgcactttctcattgccctcaccactcaaaa |
23588249 |
T |
|
| Q |
123 |
tagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaac |
222 |
Q |
| |
|
||||||||||||| || || ||||| |||||||| ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
23588248 |
tagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagttgttgaac |
23588149 |
T |
|
| Q |
223 |
cttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacac |
322 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23588148 |
cttgggaatcctagtggatccaccaacaagaacaacatcatggacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacac |
23588049 |
T |
|
| Q |
323 |
ttcctaaatagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggttt |
422 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
23588048 |
ttcctaaacagatccatgttgagctcttcaaaacgagcccgagtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggttt |
23587949 |
T |
|
| Q |
423 |
gagcagtagaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctctt |
522 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
23587948 |
gagcagtagaggaaagggtcctcttagctctctcgcaagcagttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctctt |
23587849 |
T |
|
| Q |
523 |
gaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctca |
622 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
23587848 |
gaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttgacctcaaagataccttcctca |
23587749 |
T |
|
| Q |
623 |
atagtaagaagtgaaacatcaaaagttccaccaccaagatcgaaaataagaacgttcttctcac |
686 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23587748 |
atagtaagtagggaaacatcaaaagttccaccaccaagatcgaaaataagaacgttcttctcac |
23587685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 61 - 680
Target Start/End: Original strand, 54396014 - 54396633
Alignment:
| Q |
61 |
aagaggagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaatagcagcttggactgcagcgccataagcaacagcctca |
160 |
Q |
| |
|
||||||||||||||| ||||||| |||||| || || || |||| ||||| ||||||||||| || ||||| || ||||| |||||||||||||| ||| |
|
|
| T |
54396014 |
aagaggagtaacatcaagcaacagaagatcttgaaccttttcatcaccttcaccgctcaaaatcgctgcttgaacagcagcaccataagcaacagcttca |
54396113 |
T |
|
| Q |
161 |
tcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgccaacaagaacaacat |
260 |
Q |
| |
|
|||||||| || ||||| ||||| || ||||||||||||||||| |||||||| |||||||| || |||||||| || ||||| |||||||||||||| | |
|
|
| T |
54396114 |
tcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaagctgttgaacttttggaatccttgttgatccaccaacaagaacaactt |
54396213 |
T |
|
| Q |
261 |
catcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatagatccatgttgagctcttcaaaacgagc |
360 |
Q |
| |
|
||| ||| ||||||| |||||||||||||| | ||||||||||||||| |||||||| |||||||| | |||||| || | |||||||| | || |
|
|
| T |
54396214 |
catgaacatgactcttatcaatcttagcatcccttagacacttctcaacaggttccatacatttcctaaacaaatccatattcaattcttcaaatctcgc |
54396313 |
T |
|
| Q |
361 |
gcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagaggaaagagtcctcttagctctctcacaa |
460 |
Q |
| |
|
| ||||| || | || || ||||| || |||||||||||||||||||| || || || |||||||| || ||||| || |||||||||||||||||| |
|
|
| T |
54396314 |
ccttgtaatagttgcatagaaatcaattccttcaaacaaagaatcaatttctattgttgtctgagcagttgaagaaagtgttctcttagctctctcacaa |
54396413 |
T |
|
| Q |
461 |
gcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaa |
560 |
Q |
| |
|
|| ||||| || || || | ||| |||| ||| ||||||||||| |||||||| |||||| | || || ||||||||| |||||||| |||||||||| |
|
|
| T |
54396414 |
gctgttcttaatctcctcaaagctcttgcattaccactaatatccttcttatttttcctcctaaactccgaaacaaaatgattcaccattctgttatcaa |
54396513 |
T |
|
| Q |
561 |
aatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatcaaaagttccaccaccaag |
660 |
Q |
| |
|
|||||||||| || | ||| ||||||||||| ||||||||||| || ||||| ||||| |||||||||||||| |||||||| ||||||||||| || | |
|
|
| T |
54396514 |
aatcttcaccaccaagatgagtatcaccagcagtagctttcacttcgaagatcccttcttcaatagtaagaagagaaacatcgaaagttccacctcccaa |
54396613 |
T |
|
| Q |
661 |
atcgaaaataagaacgttct |
680 |
Q |
| |
|
|| |||||||| ||||||| |
|
|
| T |
54396614 |
gtcaaaaataagcacgttct |
54396633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 124 - 291
Target Start/End: Original strand, 35132110 - 35132278
Alignment:
| Q |
124 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
223 |
Q |
| |
|
|||||| || ||||| || |||||||| ||||||||||| ||||| |||||||| || | |||||||| ||||| || | |||||| || || || || |
|
|
| T |
35132110 |
agcagcctgaactgctgccccataagctacagcctcatcggggttaatgctcttgcacaactccttccctttgaaaaagttttgcaatagctgctgcact |
35132209 |
T |
|
| Q |
224 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacac-tgttcttatccatcttagcatc |
291 |
Q |
| |
|
||||||||||||| || || |||||||||||||||||||| || | || |||| |||||||||||||| |
|
|
| T |
35132210 |
ttgggaatcctagaagaccctccaacaagaacaacatcatctacccttgctcttgtccatcttagcatc |
35132278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 116 - 264
Target Start/End: Complemental strand, 9336413 - 9336265
Alignment:
| Q |
116 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagtt |
215 |
Q |
| |
|
||||||||||||||||| || || || |||||||||||||||||||| |||||||| | | | | | ||||||||| ||||| || ||| |||| |||| |
|
|
| T |
9336413 |
ctcaaaatagcagcttgaacagctgcaccataagcaacagcctcatctgggttgatacccatgaataattccttccccttgaaaaattctagcaatagtt |
9336314 |
T |
|
| Q |
216 |
gttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatc |
264 |
Q |
| |
|
||| || || |||||||||| ||| || || |||||||||| |||||| |
|
|
| T |
9336313 |
cttgcactttcggaatcctagacgagccacccacaagaacaatatcatc |
9336265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 270
Target Start/End: Original strand, 30774930 - 30775052
Alignment:
| Q |
148 |
agcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgcca |
247 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| || | ||||||||||||||||||| |||| |||| || || ||||||||||||| || || || |
|
|
| T |
30774930 |
agcaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaagaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccg |
30775029 |
T |
|
| Q |
248 |
acaagaacaacatcatcgacact |
270 |
Q |
| |
|
|||||||||| |||||| ||||| |
|
|
| T |
30775030 |
acaagaacaatatcatctacact |
30775052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 666
Target Start/End: Original strand, 35132595 - 35132644
Alignment:
| Q |
617 |
tcctcaatagtaagaagtgaaacatcaaaagttccaccaccaagatcgaa |
666 |
Q |
| |
|
|||| ||||||||| | ||||||||||||||| ||||||||||||||||| |
|
|
| T |
35132595 |
tccttaatagtaagtattgaaacatcaaaagtgccaccaccaagatcgaa |
35132644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 240; Significance: 1e-132; HSPs: 29)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 23 - 686
Target Start/End: Original strand, 8102220 - 8102883
Alignment:
| Q |
23 |
acagtcatgactcctcctgcagtctccaaaccaagggaaagaggagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaaa |
122 |
Q |
| |
|
||||||||||| |||||||||||||||||||| | || | || || ||||||| | ||| | ||| || || |||||||| ||||| || ||||| | |
|
|
| T |
8102220 |
acagtcatgacacctcctgcagtctccaaaccttgagacaatggggtgacatccaaaagcaacaaatcttgaaccttctcatttccttcaccactcaaga |
8102319 |
T |
|
| Q |
123 |
tagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaac |
222 |
Q |
| |
|
|||||||||| || || || ||||||||||||||||| || ||||||||||| || || || ||||| ||||||||||| |||||||| ||||| ||||| |
|
|
| T |
8102320 |
tagcagcttgaacagcggcaccataagcaacagcctcgtcggggttgatgcttttgcatagctccttaccattgaagaagtcttgcaacagttgctgaac |
8102419 |
T |
|
| Q |
223 |
cttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacac |
322 |
Q |
| |
|
|||||||||||||| || || ||||||||||||||||||| || || |||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
8102420 |
tttgggaatcctagttgaaccaccaacaagaacaacatcatgaactgtgctcttgtccatcttagcatctctcaaacacttctcaacaggctccatacac |
8102519 |
T |
|
| Q |
323 |
ttcctaaatagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggttt |
422 |
Q |
| |
|
||||| || ||||||||||| || || ||||| | || || || || || |||||||| |||| ||||||||||||||||||||| |||||||| |||| |
|
|
| T |
8102520 |
ttcctgaacagatccatgttaagttcctcaaatctggcacgggtgattgtggtgtaaaaatcaacaccctcaaacaaagaatcaatctcaatggtagttt |
8102619 |
T |
|
| Q |
423 |
gagcagtagaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctctt |
522 |
Q |
| |
|
| || || || || ||||| ||||| ||||||||||| || |||||||| || ||||| ||||| || ||||| |||||||| ||||| ||||||||||| |
|
|
| T |
8102620 |
gtgcggttgatgagagagttctcttcgctctctcacatgcggttctcaatctcctaagtgccctagggtttccgctaatatccttcttgttcttcctctt |
8102719 |
T |
|
| Q |
523 |
gaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctca |
622 |
Q |
| |
|
|| ||||||||||||||| | ||||| |||||||||||||||||||| || | ||| |||||||| || ||||| || || ||||| ||||| || ||| |
|
|
| T |
8102720 |
aaactcttgaacaaaatgggtaaccattctgttatcaaaatcttcaccaccaagatgggtatcacctgcagtagccttaacttcaaatataccctcttca |
8102819 |
T |
|
| Q |
623 |
atagtaagaagtgaaacatcaaaagttccaccaccaagatcgaaaataagaacgttcttctcac |
686 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||| | ||| || || | ||||||||||||| |
|
|
| T |
8102820 |
atagtaagaagtgacacatcaaaagtaccaccacccaaatcaaagatcaacacgttcttctcac |
8102883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 101 - 654
Target Start/End: Complemental strand, 8017950 - 8017397
Alignment:
| Q |
101 |
tcattgccttcgccgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaaga |
200 |
Q |
| |
|
||||||||||| || |||||||| || ||||| || || || ||||||||||||||||| || |||||||| ||||| ||||| || || |||||||||| |
|
|
| T |
8017950 |
tcattgccttcaccactcaaaattgctgcttgtacagcggcaccataagcaacagcctcgtctgggttgatactcttgcaaagctctttaccattgaaga |
8017851 |
T |
|
| Q |
201 |
aatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaaca |
300 |
Q |
| |
|
|||||||||| ||||| ||||| |||||||| ||||| || |||||||||||||||||||||| ||| |||||| |||||||||||||| |||||||| |
|
|
| T |
8017850 |
aatcttgcaacagttgctgaactttgggaattctagttgaaccgccaacaagaacaacatcatgaacagagttcttgtccatcttagcatctctcaaaca |
8017751 |
T |
|
| Q |
301 |
cttctcaacaggctccatacacttcctaaatagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaa |
400 |
Q |
| |
|
|||||||||||||||||||||||| || || ||||||||||| || || ||||| | || || || || || |||||||| |||| ||||||||||||| |
|
|
| T |
8017750 |
cttctcaacaggctccatacactttctgaacagatccatgttaagttcctcaaatcttgcacgggtgattgtggtgtaaaaatcaacaccctcaaacaaa |
8017651 |
T |
|
| Q |
401 |
gaatcaatttcaatggtggtttgagcagtagaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaa |
500 |
Q |
| |
|
|||||||| |||||||| ||||| |||||||| || ||||| ||||| |||||||||||||| || |||||||| ||||| || || || |||||||||| |
|
|
| T |
8017650 |
gaatcaatctcaatggtagtttgtgcagtagaagagagagttctcttcgctctctcacaagctgtcctcaacctcctaagtgctctagggtttccactaa |
8017551 |
T |
|
| Q |
501 |
tatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagcttt |
600 |
Q |
| |
|
|||| ||||| ||||||||||| || || ||||||||||| || ||||| ||||| |||||||||||||| || | ||| ||||||||||| ||||| || |
|
|
| T |
8017550 |
tatccttcttgttcttcctcttaaactcctgaacaaaatgattaaccattctgttgtcaaaatcttcaccaccaagatgggtatcaccagcagtagcctt |
8017451 |
T |
|
| Q |
601 |
cacctcaaagataccttcctcaatagtaagaagtgaaacatcaaaagttccacc |
654 |
Q |
| |
|
|| ||||| ||||| || |||||||||||||| || ||||||||||| ||||| |
|
|
| T |
8017450 |
aacttcaaaaataccctcttcaatagtaagaagagacacatcaaaagtaccacc |
8017397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 22 - 660
Target Start/End: Original strand, 39985198 - 39985836
Alignment:
| Q |
22 |
cacagtcatgactcctcctgcagtctccaaaccaagggaaagaggagtaacatccagcaacaaaagatcctgtactttctcattgccttcgccgctcaaa |
121 |
Q |
| |
|
||||||||| || || || ||||||||||||||||| || ||||| || ||||||| | | ||||||||| || ||||||||||| || || ||||| |
|
|
| T |
39985198 |
cacagtcatcacaccaccagcagtctccaaaccaagagatagaggggtgacatccaaaaggagaagatcctgaaccttctcattgccctcaccactcaag |
39985297 |
T |
|
| Q |
122 |
atagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaa |
221 |
Q |
| |
|
|||||||| || || ||||| ||||| ||||||||||||||||| || |||||||| || || ||||| || || ||||||||||||||||||||||||| |
|
|
| T |
39985298 |
atagcagcctgaacagcagcaccatatgcaacagcctcatcaggatttatgctcttgcatagctcctttccgttaaagaaatcttgcaaaagttgttgaa |
39985397 |
T |
|
| Q |
222 |
ccttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccataca |
321 |
Q |
| |
|
|||| ||||| || || || || || ||||| |||||||| | |||||| ||||| |||||||| ||||| |||||||| |||||||| ||||||||||| |
|
|
| T |
39985398 |
cctttggaattctggtagaacctcctacaaggacaacatcgtggacacttttcttgtccatcttggcatctctcaaacatttctcaactggctccataca |
39985497 |
T |
|
| Q |
322 |
cttcctaaatagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtt |
421 |
Q |
| |
|
|| ||||| ||||||||||||||||| ||||| | || |||||||||| | ||| || ||||| || ||||| | ||||||||||||||||||||| |
|
|
| T |
39985498 |
ttttctaaagagatccatgttgagctcctcaaatcttgcacgagtaatgggggagtagaaatcaattccttcaaaaagagaatcaatttcaatggtggtc |
39985597 |
T |
|
| Q |
422 |
tgagcagtagaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctct |
521 |
Q |
| |
|
|| |||||||| || ||||| ||||| ||||| ||||||||||| |||||||| |||||||| || || || ||||| || || ||||| ||||| |||| |
|
|
| T |
39985598 |
tgggcagtagaagagagagttctcttcgctctttcacaagcagtcctcaacctcctaagagctctggggttgccactgatgtccttcttgttctttctct |
39985697 |
T |
|
| Q |
522 |
tgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctc |
621 |
Q |
| |
|
|||| ||||||||||| ||||||||||| ||||| |||||||| |||||||| | ||| || || || ||||| |||||||||||||||||||| || || |
|
|
| T |
39985698 |
tgaactcttgaacaaagtggttcaccattctgttgtcaaaatcctcacctccaagatgggtgtctccggctgtggctttcacctcaaagataccctcttc |
39985797 |
T |
|
| Q |
622 |
aatagtaagaagtgaaacatcaaaagttccaccaccaag |
660 |
Q |
| |
|
|||||| || | || ||||||||||| ||||||||||| |
|
|
| T |
39985798 |
aatagttagcaaagagacatcaaaagtaccaccaccaag |
39985836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 124 - 323
Target Start/End: Original strand, 17259895 - 17260094
Alignment:
| Q |
124 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
223 |
Q |
| |
|
|||||| || || ||||| ||||||||||||||||||||||||||||||||||| || | |||||| || ||||||||||| ||||| ||||| || || |
|
|
| T |
17259895 |
agcagcctgaacagcagcaccataagcaacagcctcatcagggttgatgctcttgcataattccttacccttgaagaaatcctgcaatagttgctgcact |
17259994 |
T |
|
| Q |
224 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacact |
323 |
Q |
| |
|
|| |||||||||| ||||| |||||||| ||||||||||| | ||| |||| || |||||| |||| || | ||||||||||||| |||||| |||| |
|
|
| T |
17259995 |
ttcggaatcctagaagatccaccaacaaggacaacatcatcaattctgctcttgtcaatcttaccatcactaagacacttctcaacaatctccatgcact |
17260094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 124 - 291
Target Start/End: Original strand, 8575980 - 8576147
Alignment:
| Q |
124 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
223 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| | || || || || ||| || |
|
|
| T |
8575980 |
agcagcttggacaacagcaccataagcaacagcctcatcagggttgatgctcttacataattccttccccttgaaaacctcctgtaatagctgtctcact |
8576079 |
T |
|
| Q |
224 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatc |
291 |
Q |
| |
|
|| |||||||||| || || |||||||| ||||||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
8576080 |
ttaggaatcctagaagaaccaccaacaaggacaacatcatctacactattcttgtccatcttagcatc |
8576147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 124 - 323
Target Start/End: Original strand, 17267593 - 17267792
Alignment:
| Q |
124 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
223 |
Q |
| |
|
|||||| || || ||||| ||||||||||||||||||||||||||||| || || || | ||||||||| |||||||| | ||||| ||||| || || |
|
|
| T |
17267593 |
agcagcctgaacagcagcaccataagcaacagcctcatcagggttgatacttttgcataattccttccccttgaagaagttctgcaatagttgctgcact |
17267692 |
T |
|
| Q |
224 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacact |
323 |
Q |
| |
|
|| |||||||||| || || |||||||| ||||||||||| || ||| |||| || ||||||||||| || | ||||||||||||| |||||| |||| |
|
|
| T |
17267693 |
ttcggaatcctagaagacccaccaacaaggacaacatcatcaactctgctcttgtcaatcttagcatcactaagacacttctcaacaatctccatgcact |
17267792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 8590292 - 8590458
Alignment:
| Q |
124 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
223 |
Q |
| |
|
||||||||| || || || |||||||||||||||||||| || |||||||| || |||| |||||||| | || || |||||||| || || || || |
|
|
| T |
8590292 |
agcagcttgaacagctgcaccataagcaacagcctcatctggattgatgctattgtaaagatccttccccataaaaaagtcttgcaatagctgctgcact |
8590391 |
T |
|
| Q |
224 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcat |
290 |
Q |
| |
|
||||||||||||| || || |||||||| ||||||||||| ||| ||||||| ||||||||||||| |
|
|
| T |
8590392 |
ttgggaatcctagaagaaccaccaacaagtacaacatcatctacaatgttcttgtccatcttagcat |
8590458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 125 - 282
Target Start/End: Complemental strand, 8636856 - 8636699
Alignment:
| Q |
125 |
gcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacct |
224 |
Q |
| |
|
||||| |||||||| || |||||||||||||||||||||| ||||||||||||||| ||||||||| | || || | || || || ||||| || |||| |
|
|
| T |
8636856 |
gcagcctggactgctgctccataagcaacagcctcatcagcgttgatgctcttacacagttccttcgccttaaaaatgtcctgtaatagttgctgcacct |
8636757 |
T |
|
| Q |
225 |
tgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccat |
282 |
Q |
| |
|
| |||||||||| || || |||||||| ||||||||||| | | || |||||||||| |
|
|
| T |
8636756 |
ttggaatcctagaggagccaccaacaaggacaacatcatctatattgctcttatccat |
8636699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 124 - 663
Target Start/End: Complemental strand, 8383390 - 8382851
Alignment:
| Q |
124 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
223 |
Q |
| |
|
|||||||| ||||| || ||||||||||||||||| ||||| || |||||| |||||| ||||||| |||||| || | |||||| || | ||| || |
|
|
| T |
8383390 |
agcagctttaactgctgcaccataagcaacagcctcgtcaggatttatgctcacacaaaggtccttccaattgaaaaagtgttgcaatagctcttgcact |
8383291 |
T |
|
| Q |
224 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacact |
323 |
Q |
| |
|
||||||||||| | || || || | |||||||||||||| ||||| |||| | |||||||||||| | | ||| ||||||||| ||||||||||| |
|
|
| T |
8383290 |
ttgggaatcctcgaagaaccaccgatgagaacaacatcatctacactactcttgttcatcttagcatcagtaagacagctctcaacagtctccatacact |
8383191 |
T |
|
| Q |
324 |
tcctaaatagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttg |
423 |
Q |
| |
|
| |||||| ||||| ||||| | ||||| || ||||| | | || | ||| |||||||||||| ||| || ||| || ||||| | || | |
|
|
| T |
8383190 |
tttcaaataggtccatattgagttgctcaaatttggcccgagtgactgaagaattaaaatcaataccctcatacagagcatctatgtcaatcgcggcctc |
8383091 |
T |
|
| Q |
424 |
agcagtagaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttg |
523 |
Q |
| |
|
| | | | ||||| ||||| || || ||||| ||||| ||||| ||||||||||||||| |||| || |||||||| || || |||| |||||||||| |
|
|
| T |
8383090 |
aatatcaaatgaaagtgtcctttttgccctctcgcaagccgttcttaaccttctaagagcctttgggttcccactaatgtccttattatgcttcctcttg |
8382991 |
T |
|
| Q |
524 |
aattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaa |
623 |
Q |
| |
|
|| || | |||||| | ||||| || |||||||| || ||||||||||| | ||| || || || || || || ||||| |||||| | | || || |
|
|
| T |
8382990 |
aactcgtcaacaaagtacttcacgattctgttatctaagtcttcacctcctagatgagtgtctccggcagtggccttcacaacaaagacattattcttaa |
8382891 |
T |
|
| Q |
624 |
tagtaagaagtgaaacatcaaaagttccaccaccaagatc |
663 |
Q |
| |
|
| || || || || |||||||||||||||||||||||||| |
|
|
| T |
8382890 |
ttgtgaggagagacacatcaaaagttccaccaccaagatc |
8382851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 124 - 291
Target Start/End: Original strand, 8609571 - 8609738
Alignment:
| Q |
124 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
223 |
Q |
| |
|
|||||| ||||| ||||| ||||||||||| ||||||||||||||||||||| |||| | ||||| |||||||| || ||||||| || || | || |
|
|
| T |
8609571 |
agcagcctggacagcagcaccataagcaaccgcctcatcagggttgatgctcatacacaaatcctttccattgaaaaagtcttgcagtagctgcttcact |
8609670 |
T |
|
| Q |
224 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatc |
291 |
Q |
| |
|
|| |||||||||| || || |||||||||||||||||||| || | ||||||||||| | |||||| |
|
|
| T |
8609671 |
ttcggaatcctagaagaacctccaacaagaacaacatcatctacggttttcttatccatttcagcatc |
8609738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 124 - 330
Target Start/End: Original strand, 8601628 - 8601834
Alignment:
| Q |
124 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
223 |
Q |
| |
|
||||||||| ||||| |||||||| ||||| ||||||||||| ||||||||| |||| ||||||| |||||| || |||| || | |||||| || |
|
|
| T |
8601628 |
agcagcttgaactgctgcgccataggcaactgcctcatcaggattgatgctcacgcaaatgtccttccaattgaaaaattctttcagtaattgttgcact |
8601727 |
T |
|
| Q |
224 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacact |
323 |
Q |
| |
|
||||||||||||| || ||||||||||| ||| ||||||| ||||| |||| || |||| |||||| || | ||| | ||||||| ||| ||||||| |
|
|
| T |
8601728 |
ttgggaatcctagaagaaccgccaacaaggacagcatcatccacactactcttttcgatctgagcatcactaagacaactttcaacagtctctatacact |
8601827 |
T |
|
| Q |
324 |
tcctaaa |
330 |
Q |
| |
|
|| |||| |
|
|
| T |
8601828 |
tcttaaa |
8601834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 124 - 291
Target Start/End: Original strand, 8545287 - 8545454
Alignment:
| Q |
124 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
223 |
Q |
| |
|
|||||| ||||| || || |||||||||||||||||||||||||| |||||||| || | ||||||||| || || || || || || || ||| || |
|
|
| T |
8545287 |
agcagcctggacagctgcaccataagcaacagcctcatcagggttaatgctcttgcataattccttccccttaaaaaactcctgtaatagctgtctcact |
8545386 |
T |
|
| Q |
224 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatc |
291 |
Q |
| |
|
|| |||||||||| || ||||||||||| ||||||||||| ||||| ||| |||||||||||||| |
|
|
| T |
8545387 |
ttaggaatcctagaagaaccgccaacaaggacaacatcatctacactacccttgtccatcttagcatc |
8545454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 143 - 291
Target Start/End: Complemental strand, 7878228 - 7878080
Alignment:
| Q |
143 |
ccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatc |
242 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| | |||| |||||||| || || || || ||||| || || || || ||| ||||||||| |||| |
|
|
| T |
7878228 |
ccataagcaacagcttcatccgggttgatgctactgcaaatatccttccccttaaaaaagtcctgcaatagctgctgcactttgagaatcctagatgatc |
7878129 |
T |
|
| Q |
243 |
cgccaacaagaacaacatcatcgacactgttcttatccatcttagcatc |
291 |
Q |
| |
|
| |||||||| ||||||||||| ||| ||||||| |||||| ||||||| |
|
|
| T |
7878128 |
caccaacaagtacaacatcatctacattgttcttgtccatcatagcatc |
7878080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 288
Target Start/End: Original strand, 6789156 - 6789330
Alignment:
| Q |
114 |
cgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaag |
213 |
Q |
| |
|
||||||| | |||||| ||||| || || || |||||||||||||||||||||||||||||| | || | ||||| || |||| | |||||||| || |
|
|
| T |
6789156 |
cgctcaacaaagcagcctggacagctgcaccgtaagcaacagcctcatcagggttgatgctcatgcacaaatcctttcccatgaaaacttcttgcaatag |
6789255 |
T |
|
| Q |
214 |
ttgttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagc |
288 |
Q |
| |
|
|||||| || |||||||| |||| || || |||||||| |||||||||| ||| | |||| ||||||||||| |
|
|
| T |
6789256 |
ttgttgcactttgggaattctagaagacccaccaacaaggacaacatcatttacaatactcttgtccatcttagc |
6789330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 137 - 291
Target Start/End: Original strand, 8581367 - 8581521
Alignment:
| Q |
137 |
gcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctag |
236 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| || | ||||||||| | ||| || || || || || ||| || || |||||||||| |
|
|
| T |
8581367 |
gcagcaccataagcaacagcctcatcagggttgatgctcttgcataattccttcccctggaaaaactcctgtaatagctgtctcactttaggaatcctag |
8581466 |
T |
|
| Q |
237 |
tcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatc |
291 |
Q |
| |
|
|| || |||||||| ||||||||||| ||||| | | |||||||||||||| |
|
|
| T |
8581467 |
aagaaccaccaacaaggacaacatcatctacactacccctgtccatcttagcatc |
8581521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 291
Target Start/End: Original strand, 8569987 - 8570132
Alignment:
| Q |
146 |
taagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgc |
245 |
Q |
| |
|
||||||||||||||||||||||| ||||| || || | ||||||||| | ||| || ||||| || || || || || |||||||||| || || | |
|
|
| T |
8569987 |
taagcaacagcctcatcagggttaatgctgttgcataattccttcccctggaaaaactcttgtaatagctgcctcactttaggaatcctagaagaaccac |
8570086 |
T |
|
| Q |
246 |
caacaagaacaacatcatcgacactgttcttatccatcttagcatc |
291 |
Q |
| |
|
||||||| ||||||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
8570087 |
caacaaggacaacatcatctacactattcttttccatcttagcatc |
8570132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 434 - 575
Target Start/End: Original strand, 8581664 - 8581805
Alignment:
| Q |
434 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaa |
533 |
Q |
| |
|
||||| ||||| || ||||||||||||||||| ||||||||||||| || ||||||||||| |||| || | |||| || |||||||| || | |
|
|
| T |
8581664 |
gaaagtgtccttttcgctctctcacaagcagtcctcaaccttctaatggcttttggatttccaataatctcctctttatgttttctcttgaactccgaca |
8581763 |
T |
|
| Q |
534 |
caaaatggttcaccatcctgttatcaaaatcttcacctccca |
575 |
Q |
| |
|
|||| || |||||||| ||||||||||||||||| ||||||| |
|
|
| T |
8581764 |
caaagtgattcaccattctgttatcaaaatcttcccctccca |
8581805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 8537679 - 8537758
Alignment:
| Q |
113 |
ccgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttccc |
192 |
Q |
| |
|
|||||||| | |||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||| |||||||| |
|
|
| T |
8537679 |
ccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttccc |
8537758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 143 - 236
Target Start/End: Complemental strand, 29582336 - 29582243
Alignment:
| Q |
143 |
ccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctag |
236 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | || | |||||||| ||||| || |||||||| || || || || |||||||| |||| |
|
|
| T |
29582336 |
ccataagcaacagcctcatcagggttgatgctcatgcacaaatccttccccttgaaaaattcttgcaatagctgatgcactttgggaattctag |
29582243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 264
Target Start/End: Complemental strand, 10494896 - 10494748
Alignment:
| Q |
116 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagtt |
215 |
Q |
| |
|
|||||||||||||| || || || || |||||||||||||||||||| |||||||| | | | | | ||||||||| ||||| || ||| |||| || | |
|
|
| T |
10494896 |
ctcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataattccttccccttgaaaaattctagcaatagat |
10494797 |
T |
|
| Q |
216 |
gttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatc |
264 |
Q |
| |
|
|| || ||||||||||||| ||| || || |||||||||| |||||| |
|
|
| T |
10494796 |
cctgcactttgggaatcctagacgagccacccacaagaacaatatcatc |
10494748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 561
Target Start/End: Complemental strand, 7877931 - 7877810
Alignment:
| Q |
440 |
gtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaat |
539 |
Q |
| |
|
||||| ||||| |||||||| |||||||||||||| ||||| ||||| || ||||||| ||| || |||||||||||||| || || || |||| |
|
|
| T |
7877931 |
gtccttttagccctctcacatgcagttctcaacctcctaagggccctcgggtttccaccaatgtccactttattcttcctcttaaactccatcactaaat |
7877832 |
T |
|
| Q |
540 |
ggttcaccatcctgttatcaaa |
561 |
Q |
| |
|
|||||| ||| ||||||||||| |
|
|
| T |
7877831 |
ggttcaacattctgttatcaaa |
7877810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 434 - 507
Target Start/End: Original strand, 8609881 - 8609954
Alignment:
| Q |
434 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatcttt |
507 |
Q |
| |
|
||||| |||||||| || |||||||||||||| |||||||| ||||||||||| | || ||||| |||||||| |
|
|
| T |
8609881 |
gaaagtgtcctctttgccctctcacaagcagtcctcaacctcctaagagccctcgagttcccactgatatcttt |
8609954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 3146918 - 3146974
Alignment:
| Q |
124 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttaca |
180 |
Q |
| |
|
||||||||| || || || ||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
3146918 |
agcagcttgcacagctgcaccataagcaacggcctcatcagggttgatgctgttaca |
3146974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 263
Target Start/End: Original strand, 8646547 - 8646670
Alignment:
| Q |
140 |
gcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcg |
239 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||||| || | ||||||| ||||||| || || | || | ||||| || || ||||| |||| | |
|
|
| T |
8646547 |
gcgccataagcaacggccacatcagggttgatgctctcgcataattccttctcattgaaaaactccttcagcatctgttgtacttttggaattctagagg |
8646646 |
T |
|
| Q |
240 |
atccgccaacaagaacaacatcat |
263 |
Q |
| |
|
| || ||||||||||||||||||| |
|
|
| T |
8646647 |
agccaccaacaagaacaacatcat |
8646670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 8654096 - 8654151
Alignment:
| Q |
116 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgat |
171 |
Q |
| |
|
|||||||||||||| || || ||||||||||| |||| ||||||||| |||||||| |
|
|
| T |
8654096 |
ctcaaaatagcagcctgaacagcagcgccatatgcaatagcctcatctgggttgat |
8654151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 13333890 - 13333835
Alignment:
| Q |
116 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgat |
171 |
Q |
| |
|
|||||||||||||| || || || || |||||||||||||||||||| |||||||| |
|
|
| T |
13333890 |
ctcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgat |
13333835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 629 - 663
Target Start/End: Original strand, 8602133 - 8602167
Alignment:
| Q |
629 |
agaagtgaaacatcaaaagttccaccaccaagatc |
663 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8602133 |
agaagagaaacatcaaaagttccaccaccaagatc |
8602167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 177
Target Start/End: Complemental strand, 27846597 - 27846567
Alignment:
| Q |
147 |
aagcaacagcctcatcagggttgatgctctt |
177 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
27846597 |
aagcaacagcctcatcagggttgatgctctt |
27846567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 440 - 488
Target Start/End: Original strand, 8590608 - 8590656
Alignment:
| Q |
440 |
gtcctcttagctctctcacaagcagttctcaaccttctaagagcccttg |
488 |
Q |
| |
|
||||| ||||| ||||||||||| ||| ||||||| ||||||||||||| |
|
|
| T |
8590608 |
gtccttttagccctctcacaagctgttttcaacctcctaagagcccttg |
8590656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 135; Significance: 5e-70; HSPs: 15)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 134 - 660
Target Start/End: Complemental strand, 17717191 - 17716665
Alignment:
| Q |
134 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
233 |
Q |
| |
|
||||| || ||||| |||||||||||||| || || |||||||| || || ||||| | || |||||||| ||||| |||||||||||||| ||||| | |
|
|
| T |
17717191 |
actgccgcaccatatgcaacagcctcatcgggattaatgctcttgcatagctcctttctgttaaagaaatcctgcaatagttgttgaacctttggaattc |
17717092 |
T |
|
| Q |
234 |
tagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatag |
333 |
Q |
| |
|
| || || || || ||||| |||||||||| |||||| || | |||| ||||| |||||||| |||||||| |||||||||| | ||| || || |
|
|
| T |
17717091 |
tggtagaacctcctacaaggacaacatcatggacacttcctttgtacatcccagcatggctcaaacatttctcaacttgctccatacattccctgaagag |
17716992 |
T |
|
| Q |
334 |
atccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagag |
433 |
Q |
| |
|
||||| ||||||||||||||| | || |||||||||| || || || ||||| |||||||| | | ||||||||||||||||||| || |||||||| |
|
|
| T |
17716991 |
atccaagttgagctcttcaaatctggcacgagtaatgggggtatagaaatcaattccctcaaatagacaatcaatttcaatggtggtctgggcagtagat |
17716892 |
T |
|
| Q |
434 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaa |
533 |
Q |
| |
|
|| |||| ||||| || |||||||||||||| |||||||| ||||||| ||||| || |||||||| || ||||| ||||| |||||||| ||| ||| |
|
|
| T |
17716891 |
gatagagctctcttcgccctctcacaagcagtcctcaacctcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaactctcgaa |
17716792 |
T |
|
| Q |
534 |
caaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaag |
633 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||| |||||||| | ||| | || || ||||||||||| |||| |||| ||| || |||||||| || | |
|
|
| T |
17716791 |
caaagtggttcaccattctgttattaaaatcctcacctccaagatgggcgtctccggctgtagctttaacctgaaagttacactcttcaatagttagcaa |
17716692 |
T |
|
| Q |
634 |
tgaaacatcaaaagttccaccaccaag |
660 |
Q |
| |
|
|| ||||||||||| ||||||||||| |
|
|
| T |
17716691 |
agagacatcaaaagtaccaccaccaag |
17716665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 134 - 573
Target Start/End: Complemental strand, 17648545 - 17648106
Alignment:
| Q |
134 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
233 |
Q |
| |
|
|||||||| ||||| |||||||||||||| || || ||||| || || || ||||| || | |||||||| ||||| |||||||||||||| ||||| | |
|
|
| T |
17648545 |
actgcagcaccatatgcaacagcctcatcgggattaatgctattgcatagctcctttccgtcaaagaaatcctgcaatagttgttgaacctttggaattc |
17648446 |
T |
|
| Q |
234 |
tagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatag |
333 |
Q |
| |
|
| || || ||||| ||||| |||| ||||| |||||| || || |||||| ||||||| |||||||| ||||||| |||||||||| |||||||| || |
|
|
| T |
17648445 |
ttgtagaaccgcctacaaggacaatatcatggacactttttttgtccatcctagcatctctcaaacatatctcaacttgctccatacatttcctaaagag |
17648346 |
T |
|
| Q |
334 |
atccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagag |
433 |
Q |
| |
|
||||||||||||||| ||||| | || |||||||||| | | | || ||||| ||||| || | | |||||||||||||||||||||| |||| | |
|
|
| T |
17648345 |
atccatgttgagctcctcaaatcttgcacgagtaatggaggagcagaaatcaattccctcgaatagacaatcaatttcaatggtggtttggagagtaaat |
17648246 |
T |
|
| Q |
434 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaa |
533 |
Q |
| |
|
|| ||||| ||||| || ||||||||||||| |||||||| ||||||| ||||| || |||||||| || ||||| ||||| |||||||| |||||| |
|
|
| T |
17648245 |
gatagagttctcttggccttctcacaagcagtcctcaacctcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaacacttgaa |
17648146 |
T |
|
| Q |
534 |
caaaatggttcaccatcctgttatcaaaatcttcacctcc |
573 |
Q |
| |
|
|||| || |||||||| ||||||| |||||| |||||||| |
|
|
| T |
17648145 |
caaagtgattcaccattctgttattaaaatcctcacctcc |
17648106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 134 - 573
Target Start/End: Complemental strand, 17622449 - 17622010
Alignment:
| Q |
134 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
233 |
Q |
| |
|
|||||||| ||| | ||||||||||| || || || ||||| || || || ||||| || || |||||||| ||||| | |||||||||||| ||||| | |
|
|
| T |
17622449 |
actgcagcaccacacgcaacagcctcgtcgggattaatgctattgcatagctcctttccgttaaagaaatcctgcaataattgttgaacctttggaattc |
17622350 |
T |
|
| Q |
234 |
tagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatag |
333 |
Q |
| |
|
| || || || || ||||| |||||||||| |||||| | || |||||| |||||| |||||||| |||||||| |||||||||| |||||||| || |
|
|
| T |
17622349 |
tggtagaacctcctacaaggacaacatcatggacacttgttttgtccatcctagcatttctcaaacatttctcaacttgctccatacatttcctaaagag |
17622250 |
T |
|
| Q |
334 |
atccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagag |
433 |
Q |
| |
|
|||||||||||||| |||||| || |||||||||| | | | || ||||| ||||| || | | |||||||||||||||||||||| ||||| | |
|
|
| T |
17622249 |
atccatgttgagcttttcaaatgtggcacgagtaatgggggagcagaaatcaattccctcgaatagacaatcaatttcaatggtggtttggacagtaaat |
17622150 |
T |
|
| Q |
434 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaa |
533 |
Q |
| |
|
|| ||||| ||||| || ||||||||||||| |||||||| ||||||| ||||| || ||||| || || ||||| ||||| |||||||| ||||||| |
|
|
| T |
17622149 |
gatagagttctcttggccttctcacaagcagtcctcaacctcataagagctcttgggttgccactgatgtccttcttgttctttctcttgaactcttgaa |
17622050 |
T |
|
| Q |
534 |
caaaatggttcaccatcctgttatcaaaatcttcacctcc |
573 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||| |||||||| |
|
|
| T |
17622049 |
caaagtggttcaccattctgttattaaaatcctcacctcc |
17622010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 134 - 660
Target Start/End: Complemental strand, 17718455 - 17717926
Alignment:
| Q |
134 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
233 |
Q |
| |
|
|||||||| ||||| |||||||||||||| || || |||||||| || || ||||| || || |||| ||| ||| | |||||||||||||| ||||| |
|
|
| T |
17718455 |
actgcagcaccatatgcaacagcctcatcgggattaatgctcttgcatagatcctttccgttaaagacatcctgccatagttgttgaacctttggaattt |
17718356 |
T |
|
| Q |
234 |
tagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatag |
333 |
Q |
| |
|
| || || || || ||||| |||||||||| |||||| || | |||| |||| |||||||| |||||||| |||||||||| | ||| || || |
|
|
| T |
17718355 |
tggtagaacctcctacaaggacaacatcatggacacttcctttgttcatcccagcacgtctcaaacatttctcaacttgctccatacattccctgaagag |
17718256 |
T |
|
| Q |
334 |
atccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagag |
433 |
Q |
| |
|
||||| ||||||||||||||| | || |||||||||| || || || ||||| |||||||| | | ||||||||||||||||||| || | |||||| |
|
|
| T |
17718255 |
atccaagttgagctcttcaaatctggcacgagtaatgggggtatagaaatcaattccctcaaatagacaatcaatttcaatggtggtctgggaagtagat |
17718156 |
T |
|
| Q |
434 |
gaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaa |
533 |
Q |
| |
|
|| |||| ||||| || |||||||||||||| |||||| | ||||||| ||||| || |||||||| || ||||| ||||| |||||||| ||||||| |
|
|
| T |
17718155 |
gatagagctctcttcgccctctcacaagcagtcctcaacttcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaactcttgaa |
17718056 |
T |
|
| Q |
534 |
caaaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagta---ag |
630 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||| |||||||| | ||| | || || ||||||||||| |||| |||| ||| || ||||||||| || |
|
|
| T |
17718055 |
caaagtggttcaccattctgttattaaaatcctcacctccaagatgggcgtctccggctgtagctttaacctgaaagttacactcttcaatagtagttag |
17717956 |
T |
|
| Q |
631 |
aagtgaaacatcaaaagttccaccaccaag |
660 |
Q |
| |
|
| || ||||||||||| ||||||||||| |
|
|
| T |
17717955 |
caaagagacatcaaaagtaccaccaccaag |
17717926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 136 - 627
Target Start/End: Complemental strand, 17667185 - 17666694
Alignment:
| Q |
136 |
tgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatccta |
235 |
Q |
| |
|
|||||| ||||| |||||||||| | || || ||||| || || || ||||| || || |||||||| ||||| | |||||||||||| ||||| || |
|
|
| T |
17667185 |
tgcagcaccatacacaacagcctcgttgggattaatgctattgcatagctcctttccgttaaagaaatcctgcaataattgttgaacctttggaattctg |
17667086 |
T |
|
| Q |
236 |
gtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatagat |
335 |
Q |
| |
|
|| || || || ||||| |||||||||| |||||| | || ||||||||||||| |||||||| |||||||| |||||||||| |||||||| |||| |
|
|
| T |
17667085 |
gtagaacctcctacaaggacaacatcatggacacttcttttgtccatcttagcatttctcaaacatttctcaacttgctccatacatttcctaaagagat |
17666986 |
T |
|
| Q |
336 |
ccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagagga |
435 |
Q |
| |
|
||||||||||||||||||| || ||||||||| | | | || ||||| ||||| || | | | ||||||||||||||||| ||||||||||| || |
|
|
| T |
17666985 |
ccatgttgagctcttcaaatgtggcacgagtaatgaaggagcagaaatcaattccctcgaatagacattcaatttcaatggtggtctgagcagtagatga |
17666886 |
T |
|
| Q |
436 |
aagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaaca |
535 |
Q |
| |
|
|||| ||||| || |||||||||||||| | |||||| ||||||| ||||| || ||||| || || || || ||||| || ||||| ||||||||| |
|
|
| T |
17666885 |
tagagctctcttcgccctctcacaagcagtccccaacctcataagagctcttgggttgccactgatgtccttgttgttctttcttttgaactcttgaaca |
17666786 |
T |
|
| Q |
536 |
aaatggttcaccatcctgttatcaaaatcttcacctcccaaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagt |
627 |
Q |
| |
|
|| || |||||||| ||||||| |||||| |||||||| | ||| | || || | ||||||||| ||| ||| |||||| || |||||||| |
|
|
| T |
17666785 |
aagtgattcaccattctgttattaaaatcctcacctccaagatgggggtctccggttgtagctttaaccccaatgataccctcttcaatagt |
17666694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 197 - 573
Target Start/End: Complemental strand, 17704496 - 17704120
Alignment:
| Q |
197 |
aagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctca |
296 |
Q |
| |
|
|||||||| ||||| |||||||||||||| ||||| || || || || || ||||| |||||||||| |||||| | || |||||| ||||| |||| |
|
|
| T |
17704496 |
aagaaatcctgcaatagttgttgaacctttggaattctggtagaacctcctacaaggacaacatcatggacacttgttttgtccatcctagcaaatctca |
17704397 |
T |
|
| Q |
297 |
aacacttctcaacaggctccatacacttcctaaatagatccatgttgagctcttcaaaacgagcgcgagtaatggtagtgtaaaagtcaataccctcaaa |
396 |
Q |
| |
|
|| ||||| |||| ||||||||| ||| |||| ||||||||||||||||||||||| | || ||||||||| | ||| | || || || |||| || |
|
|
| T |
17704396 |
aaagtttctcgacagtctccatacatttcataaagagatccatgttgagctcttcaaatctggcacgagtaatgatggtgaagaaatccattcccttgaa |
17704297 |
T |
|
| Q |
397 |
caaagaatcaatttcaatggtggtttgagcagtagaggaaagagtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttcca |
496 |
Q |
| |
|
||| || ||||||||||||||||||| |||| | || ||||| ||||| || ||||||||||||| |||||||| ||||||| ||| | | ||| |
|
|
| T |
17704296 |
taaacaaacaatttcaatggtggtttggagagtaaatgatagagttctcttggccttctcacaagcagtcctcaacctcataagagctctttggtcgcca |
17704197 |
T |
|
| Q |
497 |
ctaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcc |
573 |
Q |
| |
|
|| || || ||| | ||||| |||||||| ||||||||||| | ||||||||| ||||||| |||||| |||||||| |
|
|
| T |
17704196 |
ctgatgtccttcctgttctttctcttgaactcttgaacaaagtagttcaccattctgttattaaaatcctcacctcc |
17704120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 134 - 354
Target Start/End: Complemental strand, 17706216 - 17705997
Alignment:
| Q |
134 |
actgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcc |
233 |
Q |
| |
|
|||||||| ||||| |||||||||||||| || || ||||| || || || ||||| || | |||||||| |||| | ||| ||||||||| ||||| | |
|
|
| T |
17706216 |
actgcagcaccatatgcaacagcctcatcgggattaatgctattgcatagctcctttccgtcaaagaaatcctgcata-gtttttgaacctttggaattc |
17706118 |
T |
|
| Q |
234 |
tagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacacttcctaaatag |
333 |
Q |
| |
|
| || || || || ||||| |||||||||| |||||| || || |||||||||||||| |||||||| |||||||| |||||||||| |||||||| || |
|
|
| T |
17706117 |
tggtagaacctcctacaaggacaacatcatggacactttttttgtccatcttagcatctctcaaacatttctcaacttgctccatacatttcctaaagag |
17706018 |
T |
|
| Q |
334 |
atccatgttgagctcttcaaa |
354 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
17706017 |
atccatgttgagctcttcaaa |
17705997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 124 - 264
Target Start/End: Complemental strand, 12245920 - 12245780
Alignment:
| Q |
124 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
223 |
Q |
| |
|
||||||||| || || || ||||||||||||||||| |||||||| |||||||| || | ||||||||| ||||| || || || || || ||||| || |
|
|
| T |
12245920 |
agcagcttgaacagctgccccataagcaacagcctcgtcagggttaatgctcttgcacaattccttcccgttgaaaaagtcctgtaatagctgttggact |
12245821 |
T |
|
| Q |
224 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatc |
264 |
Q |
| |
|
||||||||||||| ||||| |||||||| |||| |||||| |
|
|
| T |
12245820 |
ttgggaatcctagaagatccaccaacaagtacaaaatcatc |
12245780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 16662506 - 16662429
Alignment:
| Q |
124 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaa |
201 |
Q |
| |
|
||||||||| || || || ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| |
|
|
| T |
16662506 |
agcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaa |
16662429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 453 - 573
Target Start/End: Complemental strand, 17705923 - 17705803
Alignment:
| Q |
453 |
tctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcct |
552 |
Q |
| |
|
||||||||||||| ||| ||| ||||||| | ||| || |||||||| || ||||| ||||| |||||||| |||| |||||| ||||||||||| || |
|
|
| T |
17705923 |
tctcacaagcagtcctcgaccacataagagctcatgggttgccactaatgtccttcttcttctttctcttgaactcttaaacaaagtggttcaccattct |
17705824 |
T |
|
| Q |
553 |
gttatcaaaatcttcacctcc |
573 |
Q |
| |
|
||||| |||||| |||||||| |
|
|
| T |
17705823 |
gttattaaaatcctcacctcc |
17705803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 261
Target Start/End: Original strand, 43625058 - 43625203
Alignment:
| Q |
116 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagtt |
215 |
Q |
| |
|
|||||||||||||| ||||| || || |||||||||||||||||||||||||| ||||| | || ||||||||| ||||| || || ||||| || | |
|
|
| T |
43625058 |
ctcaaaatagcagcctggacagctgcaccataagcaacagcctcatcagggtttatgctttcgcatgattccttccccttgaaaaactcctgcaacagct |
43625157 |
T |
|
| Q |
216 |
gttgaaccttgggaatcctagtcgatccgccaacaagaacaacatc |
261 |
Q |
| |
|
||| || || ||||| |||| || ||||||||||| |||||||| |
|
|
| T |
43625158 |
gttttacttttggaattctagaggagccgccaacaaggacaacatc |
43625203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 124 - 264
Target Start/End: Original strand, 11999062 - 11999201
Alignment:
| Q |
124 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
223 |
Q |
| |
|
||||||||| || || || |||||||| ||||||||||||||||| |||||||| || | |||||||| ||||| || || || || || ||||| || |
|
|
| T |
11999062 |
agcagcttgaacagctgccccataagctacagcctcatcagggttaatgctcttgcacaactccttcccgttgaaaaagtcatgtaatagctgttggact |
11999161 |
T |
|
| Q |
224 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatc |
264 |
Q |
| |
|
||||| ||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
11999162 |
ttggg-atcctagaagatccaccaacaagtacaacatcatc |
11999201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 291
Target Start/End: Original strand, 12234364 - 12234510
Alignment:
| Q |
144 |
cataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatcc |
243 |
Q |
| |
|
|||||||||| ||||| |||||||| || ||||| || || |||||||| ||||| ||||| ||||| ||||| || || ||||||||||||| || || |
|
|
| T |
12234364 |
cataagcaaccgcctc-tcagggttaatactcttgcacagctccttccccttgaaaaaatcctgcaatagttgctgcactttgggaatcctagaggaccc |
12234462 |
T |
|
| Q |
244 |
gccaacaagaacaacatcatcgacactgttcttatccatcttagcatc |
291 |
Q |
| |
|
||||| ||| ||||| ||||| || || | || |||||||||||||| |
|
|
| T |
12234463 |
gccaataaggacaacttcatccaccctacttttgtccatcttagcatc |
12234510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 116 - 264
Target Start/End: Complemental strand, 16658039 - 16657891
Alignment:
| Q |
116 |
ctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagtt |
215 |
Q |
| |
|
||||||||||||||||| || || || || ||||||||||| ||||| |||||||| || || || | ||||| || ||||| || |||||||| || | |
|
|
| T |
16658039 |
ctcaaaatagcagcttgaacagctgcaccgtaagcaacagcttcatccgggttgatacttttgcataaatccttgcccttgaaaaagtcttgcaatagat |
16657940 |
T |
|
| Q |
216 |
gttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatc |
264 |
Q |
| |
|
|| || ||||||||||||| || || || ||||||||||| ||||| |
|
|
| T |
16657939 |
cctgcactttgggaatcctagatgagccacccacaagaacaacgtcatc |
16657891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 143 - 291
Target Start/End: Original strand, 14703081 - 14703229
Alignment:
| Q |
143 |
ccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatc |
242 |
Q |
| |
|
|||||||| ||||| ||||||||||| ||||| || || | |||||||| | ||| || || || || | ||| || || |||||||||| || || | |
|
|
| T |
14703081 |
ccataagctacagcttcatcagggttaatgctgttgcacaactccttcccctggaaaaagtcctgtaataattgctgtactttgggaatccgagaagacc |
14703180 |
T |
|
| Q |
243 |
cgccaacaagaacaacatcatcgacactgttcttatccatcttagcatc |
291 |
Q |
| |
|
| || ||||||||||||||||| || || |||| |||||||||||||| |
|
|
| T |
14703181 |
caccgacaagaacaacatcatctactctactcttgtccatcttagcatc |
14703229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 143 - 324
Target Start/End: Original strand, 12528177 - 12528358
Alignment:
| Q |
143 |
ccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatc |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | | ||||| || ||||| || || ||||| || || | || ||||||||||||| ||| | |
|
|
| T |
12528177 |
ccataagcaacagcctcatcagggttgatgctcttgtataactccttgcccttgaaaaactcctgcaatagctgcttcactttgggaatcctagacgagc |
12528276 |
T |
|
| Q |
243 |
cgccaacaagaacaacatcatcgacactgttcttatccatcttagcatccctcaaacacttctcaacaggctccatacactt |
324 |
Q |
| |
|
| |||||||| |||| |||||| ||||| |||| |||||||||||||| ||||||| | ||||| | |||||||||||| |
|
|
| T |
12528277 |
caccaacaagtacaatatcatctacactactcttgtccatcttagcatcggtcaaacaactttcaacggtctccatacactt |
12528358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 263
Target Start/End: Original strand, 43744494 - 43744609
Alignment:
| Q |
148 |
agcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatccgcca |
247 |
Q |
| |
|
|||||| |||||||||||||| ||| ||||||| | |||||||| || || || ||||| |||||||| || || |||||||||| || || ||| |
|
|
| T |
43744494 |
agcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaattcctgcaatagttgttgtacttttggaatcctagaggagccacca |
43744593 |
T |
|
| Q |
248 |
acaagaacaacatcat |
263 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
43744594 |
acaagaacaacatcat |
43744609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 124 - 291
Target Start/End: Original strand, 15594688 - 15594855
Alignment:
| Q |
124 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
223 |
Q |
| |
|
|||||| ||||| || || ||||||||||||||||||||||||||||||||| | || | |||||| || | ||| ||||| | ||| |||||||| || |
|
|
| T |
15594688 |
agcagcctggacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaattcctttccctcgaaaaaatccttcaatagttgttgcact |
15594787 |
T |
|
| Q |
224 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatc |
291 |
Q |
| |
|
||||||||||||| || || ||||||| |||| ||||| ||||| |||||| |||||||||||| |
|
|
| T |
15594788 |
ttgggaatcctagaagacccaccaacaatgacaatatcatttacactactcttattcatcttagcatc |
15594855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 264
Target Start/End: Complemental strand, 4679081 - 4678931
Alignment:
| Q |
114 |
cgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaag |
213 |
Q |
| |
|
||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| || | ||||||| || || || |||||||| || |
|
|
| T |
4679081 |
cgctcaaaatagcagcttggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatag |
4678982 |
T |
|
| Q |
214 |
ttgttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatc |
264 |
Q |
| |
|
| || || ||||||||||| | || || || ||||||||||||||||| |
|
|
| T |
4678981 |
atcctgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
4678931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 291
Target Start/End: Complemental strand, 34467302 - 34467135
Alignment:
| Q |
124 |
agcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaacc |
223 |
Q |
| |
|
||||||||| || || ||| ||||||| ||||||||||||||||||||||| || || || ||||| |||||||| || || |||| || || || || |
|
|
| T |
34467302 |
agcagcttgcacagctgcgacataagcgacagcctcatcagggttgatgctattgcatagatccttaccattgaaaaagtcccgcaatagctgctgcact |
34467203 |
T |
|
| Q |
224 |
ttgggaatcctagtcgatccgccaacaagaacaacatcatcgacactgttcttatccatcttagcatc |
291 |
Q |
| |
|
||||||||||||| || || || ||||| ||| |||||| ||||| || | |||||||||||||| |
|
|
| T |
34467202 |
ttgggaatcctagaagagcccccgacaaggacagcatcatgcacactactcgtgtccatcttagcatc |
34467135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 525
Target Start/End: Complemental strand, 34466991 - 34466906
Alignment:
| Q |
440 |
gtcctcttagctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaa |
525 |
Q |
| |
|
|||||||| || |||| || |||||||||||||| || | ||| || || |||||||||||||| || |||| |||||||||||| |
|
|
| T |
34466991 |
gtcctctttgcattctcgcacgcagttctcaacctcctcaaagctctagggtttccactaatatccttattatgcttcctcttgaa |
34466906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 28219591 - 28219709
Alignment:
| Q |
143 |
ccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaagttgttgaaccttgggaatcctagtcgatc |
242 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| | ||||||||| || || || |||| |||||||| || || ||||| |||| || | |
|
|
| T |
28219591 |
ccataagcaacagcctcatcagggttaatgctcttacacaattccttccctccaaaaaattcctgcagtagttgttgtacttttggaattctagaggagc |
28219690 |
T |
|
| Q |
243 |
cgccaacaagaacaacatc |
261 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
28219691 |
ctccaacaagaacaacatc |
28219709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 449 - 549
Target Start/End: Original strand, 11209371 - 11209471
Alignment:
| Q |
449 |
gctctctcacaagcagttctcaaccttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcacca |
548 |
Q |
| |
|
|||||||| |||||||| ||| ||| ||||| || ||||||||||||||||| || | || | ||||||| ||| |||| |||||||||||||||| |
|
|
| T |
11209371 |
gctctctcgcaagcagtcttcagcctcctaagggctcttggatttccactaatgtccattttttccttcctcaagaactctttcacaaaatggttcacca |
11209470 |
T |
|
| Q |
549 |
t |
549 |
Q |
| |
|
| |
|
|
| T |
11209471 |
t |
11209471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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