View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7703_low_3 (Length: 722)

Name: NF7703_low_3
Description: NF7703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7703_low_3
NF7703_low_3
[»] chr1 (35 HSPs)
chr1 (18-694)||(23378009-23378683)
chr1 (522-693)||(23591698-23591867)
chr1 (522-693)||(1502729-1502897)
chr1 (522-693)||(38812740-38812909)
chr1 (341-412)||(23377478-23377549)
chr1 (522-693)||(13321876-13322045)
chr1 (522-693)||(30171879-30172048)
chr1 (522-693)||(30187420-30187589)
chr1 (522-693)||(23576423-23576591)
chr1 (522-691)||(6754474-6754640)
chr1 (529-677)||(36490795-36490941)
chr1 (522-691)||(41624832-41624998)
chr1 (522-693)||(6180186-6180355)
chr1 (522-693)||(39150336-39150504)
chr1 (545-693)||(39627603-39627749)
chr1 (522-693)||(35512725-35512894)
chr1 (538-682)||(47355403-47355544)
chr1 (527-693)||(7824872-7825036)
chr1 (522-693)||(22167335-22167504)
chr1 (538-682)||(7520022-7520164)
chr1 (522-639)||(52337821-52337935)
chr1 (522-693)||(17919454-17919622)
chr1 (432-498)||(18577996-18578062)
chr1 (604-692)||(5857990-5858079)
chr1 (623-696)||(29924356-29924429)
chr1 (522-573)||(25465276-25465327)
chr1 (581-693)||(34050351-34050461)
chr1 (627-693)||(44918025-44918091)
chr1 (582-693)||(3121119-3121227)
chr1 (627-692)||(8062206-8062271)
chr1 (576-631)||(33048175-33048227)
chr1 (604-661)||(35941110-35941167)
chr1 (608-685)||(43317498-43317575)
chr1 (584-681)||(50079870-50079966)
chr1 (628-693)||(51382372-51382437)
[»] chr4 (38 HSPs)
chr4 (530-693)||(2096871-2097032)
chr4 (522-693)||(24684836-24685006)
chr4 (522-693)||(9759151-9759319)
chr4 (524-693)||(19468194-19468361)
chr4 (524-691)||(19450911-19451076)
chr4 (522-693)||(16667393-16667562)
chr4 (529-693)||(50352303-50352464)
chr4 (522-693)||(17409824-17409993)
chr4 (522-691)||(49181074-49181241)
chr4 (585-693)||(7349689-7349794)
chr4 (609-679)||(10813587-10813658)
chr4 (524-693)||(40049559-40049725)
chr4 (530-693)||(8736828-8736988)
chr4 (522-693)||(23545476-23545645)
chr4 (522-693)||(27019260-27019429)
chr4 (522-693)||(34941278-34941447)
chr4 (530-656)||(37784877-37785001)
chr4 (584-693)||(6875501-6875608)
chr4 (577-693)||(25843291-25843406)
chr4 (522-678)||(27362406-27362560)
chr4 (530-693)||(52391298-52391459)
chr4 (522-693)||(54495646-54495815)
chr4 (628-693)||(10389380-10389445)
chr4 (578-692)||(33632267-33632379)
chr4 (625-682)||(40681960-40682017)
chr4 (628-693)||(49228357-49228422)
chr4 (531-637)||(1378075-1378178)
chr4 (578-692)||(19838756-19838866)
chr4 (530-680)||(39876844-39876991)
chr4 (630-693)||(45742368-45742431)
chr4 (529-637)||(55813920-55814026)
chr4 (578-669)||(13009820-13009909)
chr4 (522-693)||(47326901-47327070)
chr4 (522-693)||(47341697-47341866)
chr4 (604-693)||(49332333-49332423)
chr4 (616-693)||(10658544-10658621)
chr4 (616-693)||(10872689-10872766)
chr4 (530-692)||(51691343-51691502)
[»] chr7 (24 HSPs)
chr7 (583-693)||(42750289-42750396)
chr7 (522-692)||(47457470-47457638)
chr7 (432-512)||(19017845-19017925)
chr7 (522-694)||(26300572-26300740)
chr7 (522-693)||(24462964-24463132)
chr7 (522-693)||(33342989-33343157)
chr7 (522-691)||(7170005-7170171)
chr7 (522-686)||(25709408-25709570)
chr7 (522-693)||(46290011-46290179)
chr7 (522-693)||(4969773-4969942)
chr7 (522-693)||(19889341-19889509)
chr7 (584-693)||(19868114-19868221)
chr7 (522-693)||(34270266-34270430)
chr7 (522-693)||(9331962-9332130)
chr7 (522-693)||(23982764-23982933)
chr7 (522-600)||(33072072-33072150)
chr7 (540-693)||(47707911-47708065)
chr7 (576-666)||(3530177-3530264)
chr7 (522-666)||(8091321-8091463)
chr7 (522-568)||(26050470-26050516)
chr7 (522-568)||(26059829-26059875)
chr7 (522-600)||(29398143-29398221)
chr7 (628-693)||(24250314-24250379)
chr7 (628-693)||(29398227-29398292)
[»] chr8 (42 HSPs)
chr8 (522-693)||(26682068-26682237)
chr8 (522-693)||(6818017-6818186)
chr8 (522-693)||(31812113-31812282)
chr8 (522-693)||(3306064-3306232)
chr8 (522-693)||(20514632-20514802)
chr8 (522-693)||(2161388-2161556)
chr8 (628-693)||(7750668-7750733)
chr8 (529-693)||(12131983-12132145)
chr8 (522-693)||(9580118-9580287)
chr8 (586-693)||(14816198-14816303)
chr8 (586-693)||(14829437-14829542)
chr8 (578-693)||(38843704-38843817)
chr8 (628-693)||(11923015-11923080)
chr8 (628-693)||(38527821-38527886)
chr8 (522-657)||(39024866-39024998)
chr8 (522-693)||(12189597-12189766)
chr8 (522-693)||(12434025-12434194)
chr8 (578-664)||(34741730-34741813)
chr8 (607-693)||(8284660-8284747)
chr8 (529-693)||(45005970-45006131)
chr8 (608-685)||(5298077-5298157)
chr8 (522-693)||(13327950-13328118)
chr8 (586-693)||(35678347-35678452)
chr8 (522-693)||(36967079-36967248)
chr8 (628-693)||(7140571-7140636)
chr8 (628-693)||(9824959-9825024)
chr8 (579-673)||(16445801-16445893)
chr8 (628-693)||(40210933-40210998)
chr8 (632-692)||(11947016-11947076)
chr8 (585-693)||(9743862-9743967)
chr8 (578-686)||(10974619-10974725)
chr8 (522-691)||(28014867-28015032)
chr8 (522-600)||(2083078-2083156)
chr8 (647-693)||(11117129-11117175)
chr8 (522-693)||(26834561-26834730)
chr8 (582-693)||(32186186-32186295)
chr8 (645-695)||(37523756-37523806)
chr8 (651-693)||(38213081-38213123)
chr8 (608-666)||(44091346-44091404)
chr8 (628-693)||(10129104-10129169)
chr8 (628-693)||(12346006-12346071)
chr8 (609-666)||(45516316-45516373)
[»] chr2 (30 HSPs)
chr2 (523-693)||(15411632-15411800)
chr2 (522-693)||(9747317-9747486)
chr2 (529-693)||(5583574-5583735)
chr2 (522-693)||(14377425-14377593)
chr2 (608-693)||(12438740-12438825)
chr2 (522-684)||(45062207-45062367)
chr2 (522-693)||(23932565-23932734)
chr2 (522-693)||(27665053-27665221)
chr2 (530-693)||(43806360-43806521)
chr2 (522-656)||(24729586-24729718)
chr2 (529-693)||(34213965-34214129)
chr2 (585-693)||(34817544-34817649)
chr2 (604-693)||(39367059-39367149)
chr2 (522-693)||(7757795-7757963)
chr2 (628-693)||(12016667-12016732)
chr2 (538-640)||(2579983-2580082)
chr2 (628-692)||(7720116-7720180)
chr2 (522-598)||(26003355-26003431)
chr2 (584-668)||(2051639-2051721)
chr2 (607-693)||(43388857-43388944)
chr2 (522-693)||(19228426-19228594)
chr2 (578-693)||(36612796-36612909)
chr2 (578-693)||(36620647-36620760)
chr2 (643-693)||(36909503-36909553)
chr2 (627-693)||(39904159-39904225)
chr2 (628-693)||(4579901-4579966)
chr2 (636-693)||(16754971-16755028)
chr2 (628-693)||(16919266-16919331)
chr2 (628-693)||(22705455-22705520)
chr2 (636-693)||(26003612-26003669)
[»] chr6 (18 HSPs)
chr6 (522-693)||(6016856-6017025)
chr6 (540-693)||(30623326-30623477)
chr6 (530-693)||(8977483-8977644)
chr6 (522-693)||(34692354-34692523)
chr6 (522-693)||(14228135-14228303)
chr6 (522-693)||(28943778-28943946)
chr6 (586-676)||(29730295-29730383)
chr6 (522-691)||(10887031-10887198)
chr6 (524-693)||(33017725-33017891)
chr6 (538-693)||(1017803-1017956)
chr6 (522-693)||(29863311-29863480)
chr6 (628-693)||(1814894-1814959)
chr6 (628-693)||(3485711-3485776)
chr6 (522-693)||(17552596-17552764)
chr6 (628-693)||(24979262-24979327)
chr6 (636-691)||(17596315-17596370)
chr6 (522-693)||(18332697-18332866)
chr6 (628-693)||(5363005-5363070)
[»] chr5 (23 HSPs)
chr5 (522-693)||(30839782-30839950)
chr5 (522-693)||(36597580-36597748)
chr5 (522-691)||(8103589-8103755)
chr5 (529-693)||(18841721-18841883)
chr5 (522-693)||(3398220-3398389)
chr5 (522-693)||(40512952-40513120)
chr5 (586-693)||(5958196-5958301)
chr5 (522-693)||(11636732-11636900)
chr5 (522-631)||(15240959-15241065)
chr5 (604-685)||(10665053-10665134)
chr5 (636-693)||(11360186-11360243)
chr5 (456-497)||(20058109-20058150)
chr5 (649-693)||(11250090-11250134)
chr5 (585-682)||(28629890-28629984)
chr5 (649-693)||(33072677-33072721)
chr5 (522-693)||(2795524-2795692)
chr5 (627-681)||(11375972-11376026)
chr5 (538-600)||(15820317-15820379)
chr5 (524-614)||(23995427-23995516)
chr5 (529-599)||(31567507-31567577)
chr5 (627-693)||(34578012-34578078)
chr5 (583-666)||(40309497-40309580)
chr5 (628-693)||(24014800-24014865)
[»] chr3 (31 HSPs)
chr3 (522-693)||(2571269-2571437)
chr3 (522-693)||(10307767-10307935)
chr3 (524-693)||(54527717-54527884)
chr3 (522-693)||(38389447-38389616)
chr3 (522-693)||(50204403-50204572)
chr3 (585-694)||(20938056-20938162)
chr3 (522-691)||(46492352-46492519)
chr3 (522-693)||(51618050-51618216)
chr3 (583-676)||(53794781-53794872)
chr3 (606-684)||(2379162-2379238)
chr3 (532-661)||(38786343-38786468)
chr3 (522-693)||(11610915-11611083)
chr3 (603-686)||(24569324-24569408)
chr3 (608-691)||(37444149-37444232)
chr3 (607-694)||(40330381-40330468)
chr3 (530-693)||(13495294-13495455)
chr3 (530-693)||(42180052-42180213)
chr3 (605-693)||(37055455-37055544)
chr3 (604-693)||(47386922-47387013)
chr3 (524-600)||(51401531-51401607)
chr3 (642-693)||(8497550-8497601)
chr3 (522-686)||(45983516-45983675)
chr3 (607-693)||(46845531-46845618)
chr3 (608-682)||(13879899-13879973)
chr3 (522-568)||(25633121-25633167)
chr3 (628-694)||(26200733-26200799)
chr3 (530-693)||(12515491-12515651)
chr3 (522-599)||(23523038-23523115)
chr3 (609-693)||(30214103-30214187)
chr3 (628-693)||(32321835-32321899)
chr3 (523-600)||(49396471-49396548)
[»] scaffold0111 (1 HSPs)
scaffold0111 (522-693)||(37123-37292)
[»] scaffold0631 (1 HSPs)
scaffold0631 (649-692)||(443-486)
[»] scaffold0129 (1 HSPs)
scaffold0129 (578-686)||(13723-13829)
[»] scaffold0618 (1 HSPs)
scaffold0618 (608-666)||(8506-8564)
[»] scaffold0061 (1 HSPs)
scaffold0061 (522-693)||(52788-52956)
[»] scaffold0036 (1 HSPs)
scaffold0036 (581-692)||(94086-94195)
[»] scaffold0017 (1 HSPs)
scaffold0017 (522-693)||(145678-145846)
[»] scaffold0011 (1 HSPs)
scaffold0011 (522-693)||(13086-13254)


Alignment Details
Target: chr1 (Bit Score: 582; Significance: 0; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 582; E-Value: 0
Query Start/End: Original strand, 18 - 694
Target Start/End: Original strand, 23378009 - 23378683
Alignment:
Q  18 atcattctacaatcattatgaagtaataaaaaataaagaaggttggggatgagagttttgtcgaatcaagtctttcattataaccaagagtagcaagaca 117  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  23378009 atcattctacaatcattatgaagtaataaaaa-taaagaaggttggggatgagagttttgtcgaatcaagtctgtcattataaccaagagtaacaagaca 23378107  T
Q  118 ttaagcacattgattgacttctcaatgaacataaac-atctcacaatccaattatgttcacccataagagtcaccaaatcctcatgcacattttttcagt 216  Q
    ||||||||||||||||||||||||||||| ||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23378108 ttaagcacattgattgacttctcaatgaatatgtttgatctcacaatccaattatgttcacccataagagtcaccaaatcctcatgcacattttttcagt 23378207  T
Q  217 cctcactcttaaatcaccttaaaaccctaaattcaagtgaccaaatggggttatagtgtaggtctggagtacggagacaatcaatatactgacacatgtg 316  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  23378208 cctcgctcttaaatcacctcaaaaccctaaattcaagtgaccaaatgggcttatagtgtaggtctggagtacgaacacaatcaatatactgacacatgtg 23378307  T
Q  317 gtaggtcatacgttataatcaatcgattttagaaacctccatataaatcgctacagttttaacgcaatccattttacggatgaatttcatggacgcgctc 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  23378308 gtaggtcatacgttataatcaatcgattttagaaacctccatataaatcgctacagttttaacgcagtccattttac-gatgaatttcatggacgcgctc 23378406  T
Q  417 tgatcgattaggataaagttgtgtgtatatataggctcttgttttgttcatgttcattagataattttatttgatgatgttttattgttggtataaagcc 516  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23378407 cgatcgattaggataaagttgtgtgtatatataggctcttgttttgttcatgttcattagataattttatttgatgatgttttattgttggtat-aagcc 23378505  T
Q  517 tagactcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaaca 616  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23378506 tagactcatgtacaaatttgaacatgttaagaatttcaaaatagtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaaca 23378605  T
Q  617 aataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaaca 694  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23378606 aataattgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaaca 23378683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 23591867 - 23591698
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| ||  ||||   || |||| ||||  | ||||||||||| |||||||||||   ||||||||||| ||||||    
T  23591867 tcatgtgcaaatttgcacatgttaagaaattttaaataacaactttgcattggaacttgtacattttgtattaaatata---taactttttaataaataa 23591771  T
Q  622 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     | || |||||||||||||| ||| |||||||||||| |||||||| || ||| |||||||||||| ||||||    
T  23591770 ttattgattttcaataaaaacttactaattttagttgctttaacatgtgcaatgttgcacatgttagacaaac 23591698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 1502729 - 1502897
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  ||||| ||||||| |||||||||||   |||||||||   ||||||    
T  1502729 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatata---taactttttgttaaataa 1502825  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||| ||||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  1502826 ttgttgttttcaataaaaatttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 1502897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 38812909 - 38812740
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| |||||||| | || |||  ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  38812909 tcatgtgcaaatttgcacatgttaagaagttcaaaatagaaattttatattgaaacttgtacatttaatattaaatataa---aacttttgaataaataa 38812813  T
Q  622 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||| ||||| || ||||||||| || | |||||||||||||||| |  ||| |||||||||||||||||||    
T  38812812 ttgttgttttctaagaaaaagttactactattagttgttttaacatgtacaatgttgcacatgttaaacaaac 38812740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 341 - 412
Target Start/End: Original strand, 23377478 - 23377549
Alignment:
Q  341 gattttagaaacctccatataaatcgctacagttttaacgcaatccattttacggatgaatttcatggacgc 412  Q
    |||||||||||||||| ||| |||| || || ||||||||||||||||||||| ||||||||||||||||||    
T  23377478 gattttagaaacctccttatcaatcactgcaattttaacgcaatccattttacagatgaatttcatggacgc 23377549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 13322045 - 13321876
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| | |||||||||| || ||||| | || |||| ||||  |||||||||||| ||||||||||||    ||||||| || ||||||    
T  13322045 tcatgtgcaaatttgcatatgttaagaagtttaaaatagaaattttgtattggaatttgtacatttaatattaaatata---aaacttttgaaaaaataa 13321949  T
Q  622 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  ||||||| ||||||||| || | |||||||||||||||| |  ||| |||||||||||| ||||||    
T  13321948 ttgttgtttttcaagaaaaagttactactattagttgttttaacatgtacaatgttgcacatgttagacaaac 13321876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 30172048 - 30171879
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | |||| ||||| |||||||||||   ||| |||||||| ||||||    
T  30172048 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatat---gtagctttttaataaataa 30171952  T
Q  622 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     | || |||| ||||||||| ||| || |||||| ||| ||||||| || ||| |||||||||||| ||||||    
T  30171951 gttttgtttttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 30171879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 30187589 - 30187420
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | |||| ||||| |||||||||||   ||| |||||||| ||||||    
T  30187589 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatat---gtagctttttaataaataa 30187493  T
Q  622 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     | || |||| ||||||||| ||| || |||||| ||| ||||||| || ||| |||||||||||| ||||||    
T  30187492 gttttgtttttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 30187420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 23576423 - 23576591
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  23576423 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtattaaatata---taactttttgttaaataa 23576519  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||||||| || ||| ||||||||   ||||||| || ||||||||| |||||| ||||||    
T  23576520 ttgttggtttcaataaaaacttgttacttttagttaccttaacatgtgcaatattgcagatgttagacaaac 23576591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 522 - 691
Target Start/End: Complemental strand, 6754640 - 6754474
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| ||||||||||||| |||   |||  ||||||| || |||    
T  6754640 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattat---gtagatttttaataattaa 6754544  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 691  Q
     ||||  |||||||||||||||| || |||||||||  ||||||| || |||||||||||||||| ||||    
T  6754543 ttgttggtttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaa 6754474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 529 - 677
Target Start/End: Complemental strand, 36490941 - 36490795
Alignment:
Q  529 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-a 627  Q
    |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||||||||||| |||| ||||||   ||||||||||| |||||| ||||      
T  36490941 caaatttgcacatgttaagaagtttaaaatagtaactttgcattggaacttgtacattttgtatttaatata---taactttttaataaataattgttgt 36490845  T
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattg 677  Q
    ||||||||||||| ||| || ||||| ||| |||||||| || |||||||    
T  36490844 ttttcaataaaaacttactacttttaattgctttaacatgtgcaatattg 36490795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 522 - 691
Target Start/End: Complemental strand, 41624998 - 41624832
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| | ||| |||||| || ||| | |||| ||||| |||  | |||| ||||||||||||| |||   |||  ||||||| || |||    
T  41624998 tcatgtgcaaatttgcatatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattat---gtagatttttaataattaa 41624902  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 691  Q
     ||||  |||||||||||||||| || ||||||||| |||||||| || |||||||||||||||| ||||    
T  41624901 ttgttggtttcaataaaaagttactatttttagttgctttaacatgtgcaatattgcacatgttagacaa 41624832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 6180355 - 6180186
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||  ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  6180355 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgtacatttaatattaaatataa---aacttttaaataaataa 6180259  T
Q  622 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     | | |||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  6180258 ttataattttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 6180186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 39150336 - 39150504
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  ||||||   |||||||||||||||   ||||||||| || ||||||    
T  39150336 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatat---gtaactttt-aataaataa 39150431  T
Q  622 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| || |||||||||||||||| ||||||    
T  39150432 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 39150504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 545 - 693
Target Start/End: Original strand, 39627603 - 39627749
Alignment:
Q  545 aagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-attttcaataaaaagtt 643  Q
    ||||| |||||||| ||||||||| ||||  | |||| ||||||||||||||||   |||||||||| || || | | ||||  |||||||| |||||||    
T  39627603 aagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaata---tgtaacttttcaataagtgattgttgtttttcaattaaaagtt 39627699  T
Q  644 attaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
      || ||||||||   ||||||| ||||||||||||||||||| ||||||    
T  39627700 gctatttttagtttccttaacatgtgtaatattgcacatgttagacaaac 39627749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 35512894 - 35512725
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||  ||||  | ||| |||||| ||||||||||||    ||||||| || | ||||    
T  35512894 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgcacatttaatattaaatataa---aacttttgaatatataa 35512798  T
Q  622 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||| ||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  35512797 atgttgttttccaagaaaaagttactactattagttgttttaacatttgcaatgttgcacatgttagacaaac 35512725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 538 - 682
Target Start/End: Original strand, 47355403 - 47355544
Alignment:
Q  538 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataa 637  Q
    |||||||||||| || |||||  |||||||| ||||  | |||| |||||||||||||  |||   || |||||| | || ||| |||| ||||||||||    
T  47355403 acatgttaagaaatttaaaataataaatttgtattggaacttgttcattttatattaatgata---tacctttttgataagtaattgttgttttcaataa 47355499  T
Q  638 aaagttattaattttagttgttttaacatatgtaatattgcacat 682  Q
    ||||||  || ||||||||| |||||||| || ||||||||||||    
T  47355500 aaagtttatacttttagttgctttaacatgtgcaatattgcacat 47355544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 693
Target Start/End: Original strand, 7824872 - 7825036
Alignment:
Q  527 tacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt 626  Q
    |||||||||| ||||||||| || || |||||   || |||| | ||  |||||||||||| ||||||||||||    ||||||| || |||||| |||     
T  7824872 tacaaatttgcacatgttaaaaagtttaaaataaaaattttgtaatgaaatttgtacatttaatattaaatataa---aacttttgaataaataattgtg 7824968  T
Q  627 attttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  7824969 gttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 7825036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 22167504 - 22167335
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaacttttt-aacaaata 620  Q
    |||||| |||||||| ||||| |||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    || ||||| || |||||    
T  22167504 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatata----aattttttgaataaata 22167409  T
Q  621 actgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    | |||| |||| ||| ||||||||| || | |||||||||||||||| || ||| ||||||||| || ||||||    
T  22167408 attgttgtttttcaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatggtagacaaac 22167335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 538 - 682
Target Start/End: Original strand, 7520022 - 7520164
Alignment:
Q  538 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aata 636  Q
    |||||||||||| || |||||   || |||| ||||  ||||||||||||| |||| ||||||   |||| |||||| |||||| | |||||||  ||||    
T  7520022 acatgttaagaagtttaaaataacaactttgcattgaaatttgtacattttgtatttaatata---taacattttaataaataagtattattttttaata 7520118  T
Q  637 aaaagttattaattttagttgttttaacatatgtaatattgcacat 682  Q
    |||| ||| || ||||||||| |||||||| || ||||||||||||    
T  7520119 aaaatttactacttttagttgctttaacatgtgcaatattgcacat 7520164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 522 - 639
Target Start/End: Complemental strand, 52337935 - 52337821
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    ||||| |||| ||||||||||||||||| || ||||| |||||| || ||||| | || |  |||||||||||||||||   ||| ||||||| ||||||    
T  52337935 tcatgaacaagtttgaacatgttaagaagtttaaaatagtaaatatgcattgcaacttatgtattttatattaaatata---taaatttttaataaataa 52337839  T
Q  622 ctgttattttcaataaaa 639  Q
     ||||||| | |||||||    
T  52337838 ttgttattattaataaaa 52337821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 17919622 - 17919454
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| ||||  |||||| || ||| | |||| ||||| |||  ||||||   |||||||||||||||   ||||||||| || ||||||    
T  17919622 tcatgtgcaaatttgcacataataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatat---gtaactttt-aataaataa 17919527  T
Q  622 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| |  |||||||||||||||| ||||||    
T  17919526 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtacaatattgcacatgttagacaaac 17919454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 432 - 498
Target Start/End: Complemental strand, 18578062 - 18577996
Alignment:
Q  432 aagttgtgtgtatatataggctcttgttttgttcatgttcattagataattttatttgatgatgttt 498  Q
    |||||||||||| ||||||| | |||||||| | |||  ||||||||| ||||||||||||||||||    
T  18578062 aagttgtgtgtagatataggattttgttttgatgatgcacattagatagttttatttgatgatgttt 18577996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 692
Target Start/End: Complemental strand, 5858079 - 5857990
Alignment:
Q  604 taactttttaacaaataactg-ttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 692  Q
    ||||||||||| |||||| |  || |||| ||||||||||| ||| ||||| ||||||||| || |  ||||||||||||||||||||||    
T  5858079 taactttttaataaataattacttgtttttaataaaaagttgttacttttaattgttttaatatgtcaaatattgcacatgttaaacaaa 5857990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 696
Target Start/End: Original strand, 29924356 - 29924429
Alignment:
Q  623 tgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaacaaa 696  Q
    |||||||||||||||||| || ||| ||||||||| |||| ||| |||||  ||||| |||||| |||||||||    
T  29924356 tgttattttcaataaaaaattgttatttttagttgctttagcatgtgtaacgttgcatatgttagacaaacaaa 29924429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 522 - 573
Target Start/End: Complemental strand, 25465327 - 25465276
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattg 573  Q
    |||||| |||||||| |||||||||||| |||||||| ||||||||| ||||    
T  25465327 tcatgtgcaaatttgcacatgttaagaagttcaaaatagtaaatttgcattg 25465276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 693
Target Start/End: Original strand, 34050351 - 34050461
Alignment:
Q  581 tacattttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgca 679  Q
    ||||||||||||| ||||||   ||| ||||| | |||||| |||| |||| |||||| || || ||| |||| |||| |||||||| || |||||||||    
T  34050351 tacattttatatttaatata---taattttttgataaataattgttgtttttcaataataatttgttacttttggttgctttaacatgtgcaatattgca 34050447  T
Q  680 catgttaaacaaac 693  Q
    ||||||| ||||||    
T  34050448 catgttagacaaac 34050461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 627 - 693
Target Start/End: Complemental strand, 44918091 - 44918025
Alignment:
Q  627 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||||||||| ||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  44918091 attttcaataaaaatttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 44918025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 582 - 693
Target Start/End: Complemental strand, 3121227 - 3121119
Alignment:
Q  582 acattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcaca 681  Q
    ||||||| |||||||||||   |||||||||   |||||| ||||  |||||||||||| ||  || ||||| ||   ||||||||||||||||||||||    
T  3121227 acattttgtattaaatata---taactttttgttaaataattgttggtttcaataaaaacttgctacttttaattaccttaacatatgtaatattgcaca 3121131  T
Q  682 tgttaaacaaac 693  Q
    | ||| ||||||    
T  3121130 tattagacaaac 3121119  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 8062271 - 8062206
Alignment:
Q  627 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 692  Q
    ||||||||| |||||||| || ||||||||   ||||||| |  ||||||||||||||||||||||    
T  8062271 attttcaatgaaaagttactacttttagttaccttaacatgttcaatattgcacatgttaaacaaa 8062206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 576 - 631
Target Start/End: Original strand, 33048175 - 33048227
Alignment:
Q  576 atttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt 631  Q
    ||||||| |||||||||||||||||   ||||||||||| |||||| |||||||||    
T  33048175 atttgtatattttatattaaatata---taactttttaataaataattgttatttt 33048227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 661
Target Start/End: Original strand, 35941110 - 35941167
Alignment:
Q  604 taactttttaacaaataactgttattttcaataaaaagttattaattttagttgtttt 661  Q
    ||||||||||| |||||| |||| |||| |||||||||||| || |||||||| ||||    
T  35941110 taactttttaataaataaatgttgtttttaataaaaagttaatacttttagttctttt 35941167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 608 - 685
Target Start/End: Complemental strand, 43317575 - 43317498
Alignment:
Q  608 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtt 685  Q
    ||||||| |||| | |||| ||||||| ||| ||||| || ||||||||| |||||||| |  |||||||||||||||    
T  43317575 tttttaataaatgattgttgttttcaaaaaatagttactacttttagttgctttaacatgtacaatattgcacatgtt 43317498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 584 - 681
Target Start/End: Complemental strand, 50079966 - 50079870
Alignment:
Q  584 attttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcaca 681  Q
    |||||||||||||||   | ||| ||||||| |||||| |  | |||| |||||||||||| || ||||| ||| |||||||||| ||||||||||||    
T  50079966 attttatattaaataatatataattttttaataaataattaatttttttaataaaaagttacta-ttttaattgctttaacatatataatattgcaca 50079870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 693
Target Start/End: Complemental strand, 51382437 - 51382372
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  51382437 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 51382372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 2e-29; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 530 - 693
Target Start/End: Complemental strand, 2097032 - 2096871
Alignment:
Q  530 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 628  Q
    ||||||| |||||||||||| ||||||||||||| |||| ||||  | |||| ||||||||||||||||||   ||||||||||| |||||| ||||  |    
T  2097032 aaatttgcacatgttaagaagttcaaaatggtaagtttgtattggaacttgtgcattttatattaaatata---taactttttaataaataattgttgtt 2096936  T
Q  629 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||||||||||| | | ||||||||| |||||| | || |||||||||||||||| ||||||    
T  2096935 tttcaataaaaagttgtcacttttagttgatttaacttgtgcaatattgcacatgttagacaaac 2096871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 24685006 - 24684836
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  24685006 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtacatttaatattaaatataa---aacttttgaataaataa 24684910  T
Q  622 ctgttattttc--aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||| |||||  || ||||||||| || | |||||||||||||||| |||||| ||||| |||||||||||||    
T  24684909 ttgttgttttccaaaaaaaaagttactactattagttgttttaacatgtgtaatgttgcaaatgttaaacaaac 24684836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 9759151 - 9759319
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    ||||||||||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  9759151 tcatgtacaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaagttgaacattttgtattaaatata---taactttttgttaaataa 9759247  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  9759248 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 9759319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 524 - 693
Target Start/End: Complemental strand, 19468361 - 19468194
Alignment:
Q  524 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 623  Q
    |||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |    
T  19468361 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataa---aacttttgaataaataatt 19468265  T
Q  624 gttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||| ||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  19468264 gttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 19468194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 524 - 691
Target Start/End: Original strand, 19450911 - 19451076
Alignment:
Q  524 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 623  Q
    |||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |    
T  19450911 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttgaataaataatt 19451007  T
Q  624 gttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 691  Q
    ||| |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||    
T  19451008 gttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaa 19451076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 16667393 - 16667562
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || |||||| ||| ||| | |||  | ||||  ||||||||||||||||   ||| |||||||| ||||||    
T  16667393 tcatgtgcaaatttgcacatgttaagaagtttaaaatgataattttaacttgaaacttgtgtattttatattaaatat---gtagctttttaataaataa 16667489  T
Q  622 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||| |||| |||| |||| ||| || |||||| ||| ||||||| || ||| |||||||||||| ||||||    
T  16667490 gtgttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 16667562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 529 - 693
Target Start/End: Complemental strand, 50352464 - 50352303
Alignment:
Q  529 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 628  Q
    |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   |||||| ||||      
T  50352464 caaatttgcacatgttaagaaatttaaaatagtaattttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataattgttgg 50352368  T
Q  629 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  50352367 tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 50352303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 17409993 - 17409824
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaacttttt-aacaaata 620  Q
    |||||| |||||||| ||||| |||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    || ||||| || |||||    
T  17409993 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatata----aattttttgaataaata 17409898  T
Q  621 actgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    | |||| |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  17409897 attgttgtttttcaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 17409824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 522 - 691
Target Start/End: Complemental strand, 49181241 - 49181074
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| || ||||||||| |||||||| ||||||||| ||||  | |||| ||||||||||||||||   |||||||||| || |||| |    
T  49181241 tcatgtgcaaatttgcacctgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaata---tgtaacttttcaataaatga 49181145  T
Q  622 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 691  Q
     ||||  |||||||| ||| |||  || ||||||||   ||||||| || |||||||||||| ||| ||||    
T  49181144 ttgttgtttttcaattaaaggttgctacttttagtttccttaacatgtgcaatattgcacattttagacaa 49181074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 585 - 693
Target Start/End: Complemental strand, 7349794 - 7349689
Alignment:
Q  585 ttttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatg 683  Q
    |||||||||||||||   ||||||||| ||||||||| ||||  |||||||| ||||||||||| |||||||||  ||||||| || |||||||||| ||    
T  7349794 ttttatattaaatat---gtaactttt-aacaaataattgttggttttcaatgaaaagttattacttttagttgccttaacatgtgcaatattgcacgtg 7349699  T
Q  684 ttaaacaaac 693  Q
    ||| ||||||    
T  7349698 ttagacaaac 7349689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 609 - 679
Target Start/End: Original strand, 10813587 - 10813658
Alignment:
Q  609 ttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgca 679  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||  |||||||||| |||||||||    
T  10813587 ttttaacaaataattgttggttttcaataaaaagttattacttttagttgccttaacatatgcaatattgca 10813658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 524 - 693
Target Start/End: Complemental strand, 40049725 - 40049559
Alignment:
Q  524 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 623  Q
    |||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||  ||||||| |||||||||||   ||| |||||   |||||| |    
T  40049725 atgtgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaactttaacattttttattaaatata---taattttttgttaaataatt 40049629  T
Q  624 gttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||  |||| ||||||| ||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  40049628 gttggtttctataaaaacttactacttttagttactttaacatgtgcaatattgcacatgttagacaaac 40049559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 530 - 693
Target Start/End: Original strand, 8736828 - 8736988
Alignment:
Q  530 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 629  Q
    ||||||| |||||||||||| || ||| |||||| ||||| |||  | | || ||||| |||||||||||   |||||||||||| |||||| | || ||    
T  8736828 aaatttgcacatgttaagaaatttaaagtggtaactttgacttggaact-gtgcatttcatattaaatat---gtaactttttaataaataagttttgtt 8736923  T
Q  630 tt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    || ||||||||| ||| || |||||| ||| ||||||| || ||| |||||||||||| ||||||    
T  8736924 tttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 8736988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 23545645 - 23545476
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| ||||||||| || || |||||   || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  23545645 tcatgtgcaaatttgcacatgttaataagtttaaaatataaattttgtattggaaattgtacatttaatattaaatataa---aacttttgaataaataa 23545549  T
Q  622 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||| |||| ||| ||||| ||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  23545548 ttgttgtttttcaagaaaaaattactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 23545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 27019429 - 27019260
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| | ||||||| || || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  27019429 tcatgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataa---aacttttgaataaataa 27019333  T
Q  622 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||| ||||| || ||||||||| || | |||||||||||||||| || ||| ||||||| |||| ||||||    
T  27019332 ttgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacacgttagacaaac 27019260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 34941447 - 34941278
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| | |||||| ||||| |||||| || ||||| |||| |||| ||||  | ||||||||||| |||| ||||||   ||||||||||| |||||     
T  34941447 tcatgtgcgaatttgcacatgataagaagtttaaaatagtaattttgcattggaacttgtacattttgtatttaatata---taactttttaataaatag 34941351  T
Q  622 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||| |||| |||||||||||| ||| ||||||||   |||| || || |||||| ||||||||| ||||||    
T  34941350 ttgttgtttttcaataaaaagttgttacttttagttaccttaatatgtgcaatattacacatgttagacaaac 34941278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 530 - 656
Target Start/End: Original strand, 37784877 - 37785001
Alignment:
Q  530 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 628  Q
    ||||||| |||||||||||| |||||||| ||||||||  ||||  |||||| |||||||| |||||||   ||||||||||||| |||| | | ||  |    
T  37784877 aaatttggacatgttaagaagttcaaaatagtaaatttatattgtaatttgtgcattttatgttaaata---tgtaactttttaataaatgattattgtt 37784973  T
Q  629 tttcaataaaaagttattaattttagtt 656  Q
    |||||||||||||||  || ||||||||    
T  37784974 tttcaataaaaagttgctacttttagtt 37785001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 584 - 693
Target Start/End: Complemental strand, 6875608 - 6875501
Alignment:
Q  584 attttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacat 682  Q
    |||||||||||||| ||   |||||||| || |||||| || ||||||| |||||||  ||| || |||||||||||||||||| || ||||||||| ||    
T  6875608 attttatattaaattta---taacttttcaataaataattgatattttccaataaaatattactatttttagttgttttaacatgtgcaatattgcaaat 6875512  T
Q  683 gttaaacaaac 693  Q
    |||| ||||||    
T  6875511 gttagacaaac 6875501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 577 - 693
Target Start/End: Complemental strand, 25843406 - 25843291
Alignment:
Q  577 tttgtacattttatattaaatatagtgtaa-ctttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaata 674  Q
    ||||| ||||||||||||||||||   ||| |||||||||||||   ||||  ||||||||||||||||| || ||||||||| |||||||| | | |||    
T  25843406 tttgtgcattttatattaaatata---taagctttttaacaaatggttgttgtttttcaataaaaagttactacttttagttgctttaacatgtattata 25843310  T
Q  675 ttgcacatgttaaacaaac 693  Q
    ||| |||||||| ||||||    
T  25843309 ttgtacatgttagacaaac 25843291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 522 - 678
Target Start/End: Complemental strand, 27362560 - 27362406
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  |||||| ||||| ||||||||||   |||| |||||| | ||||||    
T  27362560 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaatttgtgcatttcatattaaata---tgtagctttttgataaataa 27362464  T
Q  622 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgc 678  Q
     | ||  ||||||||||||| ||| || |||||| | | |||||||||| ||| ||||    
T  27362463 gttttgtttttcaataaaaaattactacttttagatatcttaacatatgcaatgttgc 27362406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 530 - 693
Target Start/End: Complemental strand, 52391459 - 52391298
Alignment:
Q  530 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 628  Q
    ||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| ||||  |    
T  52391459 aaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttgaataaataattgttgtt 52391363  T
Q  629 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||| ||||||||| || | |||||| ||||||||| || || ||| ||||| ||| ||||||    
T  52391362 tttcaaaaaaaagttactactattagttattttaacatgtgcaacattacacatattagacaaac 52391298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 54495646 - 54495815
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||| | |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  54495646 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttaacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 54495742  T
Q  622 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     | ||  ||||||| ||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  54495743 gttttgtttttcaaaaaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 54495815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 693
Target Start/End: Original strand, 10389380 - 10389445
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||| |||||||| || ||||||||  | |||||| ||||||||||||||||||| ||||||    
T  10389380 ttttcaattaaaagttaatacttttagttactataacatgtgtaatattgcacatgttagacaaac 10389445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 578 - 692
Target Start/End: Original strand, 33632267 - 33632379
Alignment:
Q  578 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatatt 676  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| |||| ||| ||||||||| || | ||||||||||| |||| | |||| ||    
T  33632267 ttgtacatttaatattaaatataa---aacttttgaataaataattgttgtttttcaaaaaaaagttactactattagttgtttttacatgtataatgtt 33632363  T
Q  677 gcacatgttaaacaaa 692  Q
    |||||||||| |||||    
T  33632364 gcacatgttagacaaa 33632379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 625 - 682
Target Start/End: Complemental strand, 40682017 - 40681960
Alignment:
Q  625 ttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacat 682  Q
    |||||||||||||||| ||| || |||||||||  |||||||||| ||||||||||||    
T  40682017 ttattttcaataaaaaattactatttttagttgacttaacatatgcaatattgcacat 40681960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 693
Target Start/End: Complemental strand, 49228422 - 49228357
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||| |||||||| || ||||||||   |||||||||| |||||||||||||||| ||||||    
T  49228422 ttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgcacatgttagacaaac 49228357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 531 - 637
Target Start/End: Complemental strand, 1378178 - 1378075
Alignment:
Q  531 aatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattt 630  Q
    |||||| |||||||||||| || ||||||||||||||   |||  | |||||||||| ||||||||||||   |||| |||||| |||||| || | |||    
T  1378178 aatttgcacatgttaagaaatttaaaatggtaaatttatcttgaaacttgtacatttaatattaaatata---taacattttaataaataattgatgttt 1378082  T
Q  631 tcaataa 637  Q
    |||||||    
T  1378081 tcaataa 1378075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 578 - 692
Target Start/End: Original strand, 19838756 - 19838866
Alignment:
Q  578 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattg 677  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| |||  || |||||||||||| | |||||||||||||||| || ||| ||     
T  19838756 ttgtacatttaatattaaatataa---aacttttgaataaataattgttgtttaaaa-aaaaagttattactattagttgttttaacatgtgcaatgttc 19838851  T
Q  678 cacatgttaaacaaa 692  Q
    ||||||||| |||||    
T  19838852 cacatgttagacaaa 19838866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 530 - 680
Target Start/End: Complemental strand, 39876991 - 39876844
Alignment:
Q  530 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 629  Q
    ||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| ||| |||||||   |||||||||   |||||| ||||  |    
T  39876991 aaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtatcaaatata---taactttttgttaaataattgttggt 39876895  T
Q  630 ttcaataaaaagttattaattttagttgttttaacatatgtaatattgcac 680  Q
    ||||||||||| ||| || ||||||||   ||||||| || ||||||||||    
T  39876894 ttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcac 39876844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 630 - 693
Target Start/End: Complemental strand, 45742431 - 45742368
Alignment:
Q  630 ttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  45742431 ttcaagaaaaagttaatactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 45742368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 637
Target Start/End: Complemental strand, 55814026 - 55813920
Alignment:
Q  529 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-a 627  Q
    |||||||| ||||||||| || || |||||  ||| |||| ||||  ||||||||||| | |||||||||||   ||||||||||| |||||| |||| |    
T  55814026 caaatttgcacatgttaaaaagtttaaaataataattttgtattgaaatttgtacattctgtattaaatata---taactttttaataaataattgttga 55813930  T
Q  628 ttttcaataa 637  Q
    ||||||||||    
T  55813929 ttttcaataa 55813920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 578 - 669
Target Start/End: Original strand, 13009820 - 13009909
Alignment:
Q  578 ttgtacattttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatg 669  Q
    ||||| ||||| |||||||||||   || |||||||  |||||| | ||| ||||||||||||| ||| || |||||||||||||||||||||    
T  13009820 ttgtatattttgtattaaatata---tagctttttagtaaataattattagttttcaataaaaacttaatacttttagttgttttaacatatg 13009909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 47326901 - 47327070
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | || | ||||| ||||||||||   ||||  ||||||| ||||||    
T  47326901 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaata---tgtagttttttaataaataa 47326997  T
Q  622 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     | ||  |||||||| |||| ||| || |||||| ||| ||||||| || ||| ||||||| |||| ||||||    
T  47326998 gttttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacaggttagacaaac 47327070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 47341697 - 47341866
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | || | ||||| ||||||||||   ||||  ||||||| ||||||    
T  47341697 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaata---tgtagttttttaataaataa 47341793  T
Q  622 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     | ||  |||||||| |||| ||| || |||||| ||| ||||||| || ||| ||||||| |||| ||||||    
T  47341794 gttttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacaggttagacaaac 47341866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 604 - 693
Target Start/End: Complemental strand, 49332423 - 49332333
Alignment:
Q  604 taactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||||||| |||||| |  |||||| |||| ||||||||||| ||||| ||   ||||||| || |||||||||||||||| ||||||    
T  49332423 taactttttaataaataattaatatttttcaatgaaaagttattacttttaattaccttaacatgtgaaatattgcacatgttagacaaac 49332333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 693
Target Start/End: Original strand, 10658544 - 10658621
Alignment:
Q  616 aaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||| ||||  |||||||||||| ||  || ||||||||   ||||||| ||||||||||||||||||| ||||||    
T  10658544 aaataattgttggtttcaataaaaacttgctacttttagttaccttaacatgtgtaatattgcacatgttagacaaac 10658621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 693
Target Start/End: Original strand, 10872689 - 10872766
Alignment:
Q  616 aaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||| ||||  |||||||||||| ||  || ||||||||   ||||||| ||||||||||||||||||| ||||||    
T  10872689 aaataattgttggtttcaataaaaacttgctacttttagttaccttaacatgtgtaatattgcacatgttagacaaac 10872766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 692
Target Start/End: Complemental strand, 51691502 - 51691343
Alignment:
Q  530 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtta-t 628  Q
    ||||||| |||||||||||| ||  |||| |||| |||| ||||  | ||||| |||||  ||||||||||   || |||||||| |||||| | ||| |    
T  51691502 aaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgaattaaatata---tagctttttaataaataattattagt 51691406  T
Q  629 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 692  Q
    |||||||||| | ||| | |||||||||| |||||||| || ||| |||||||| ||| |||||    
T  51691405 tttcaataaagacttact-attttagttgctttaacatgtgcaatgttgcacattttagacaaa 51691343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 3e-28; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 583 - 693
Target Start/End: Complemental strand, 42750396 - 42750289
Alignment:
Q  583 cattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacat 682  Q
    ||||||||||||||   | ||||||||||||| |||||| | || |||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  42750396 cattttatattaaa---attgtaactttttaataaataattattgttttcaataaaaagttattatttttagttgctttaacatatgcaatattgcacat 42750300  T
Q  683 gttaaacaaac 693  Q
    |||||||||||    
T  42750299 gttaaacaaac 42750289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 522 - 692
Target Start/End: Original strand, 47457470 - 47457638
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| ||||||||| || || ||| | |||| ||||| |||  |||| | |||||||||||| ||   ||||| ||||| || ||||||    
T  47457470 tcatgtgcaaatttgcacatgttaaaaaatttaaagtagtaactttgacttggaatttatgcattttatattatat---gtgtagcttttaaataaataa 47457566  T
Q  622 ctgttattttcaataaaaag-ttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 692  Q
     ||||||||||||||||||  ||| || |||||||||||||||||| || |||||||||||||||| |||||    
T  47457567 ttgttattttcaataaaaaaattactacttttagttgttttaacatgtgcaatattgcacatgttagacaaa 47457638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 432 - 512
Target Start/End: Original strand, 19017845 - 19017925
Alignment:
Q  432 aagttgtgtgtatatataggctcttgttttgttcatgttcattagataattttatttgatgatgttttattgttggtataa 512  Q
    |||||||||||  ||||||| ||||| |||| | |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  19017845 aagttgtgtgttgatataggttcttgatttgatgatgttcattagatagttttatttgatgatgttttattgttagtataa 19017925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 694
Target Start/End: Complemental strand, 26300740 - 26300572
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    ||||||||||||||| ||||||||| || || ||||| |||| |||||||||  | ||||| ||||| |||||||| ||   ||||||||||| || |      
T  26300740 tcatgtacaaatttgcacatgttaaaaagtttaaaatagtaactttgaattgaaacttgtatattttgtattaaatgta---taactttttaataatttt 26300644  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaaca 694  Q
     | || ||||||||| | | ||| || ||||||||||||||||||||| |||||| ||||||||| |||||||    
T  26300643 ttttt-ttttcaatacagaattaatacttttagttgttttaacatatgcaatattacacatgttagacaaaca 26300572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 24462964 - 24463132
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || |||||  ||| ||||| ||    ||||||||||||||||||||||   ||||  ||||||| |||||     
T  24462964 tcatgtgcaaatttgcacatgttaagaagtttaaaataataactttgacttaaagtttgtacattttatattaaata---tgtagttttttaataaatac 24463060  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||| |||||||||| || ||| || |||||||||  ||||||| || |||||| ||||||||| ||||||    
T  24463061 ttgttgttttcaataagaaattactacttttagttgccttaacatgtgaaatatttcacatgttagacaaac 24463132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 33343157 - 33342989
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  33343157 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgtattggaacttgaacattttgtattaaatata---taactttttgttaaataa 33343061  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  33343060 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 33342989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 522 - 691
Target Start/End: Complemental strand, 7170171 - 7170005
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| ||||||||||||| |||   |||  ||||||| || |||    
T  7170171 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattat---gtagatttttaataattaa 7170075  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 691  Q
     ||||  |||||||||||||||| || |||||||||  ||||||| || |||||||||||||||| ||||    
T  7170074 ttgttggtttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaa 7170005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 522 - 686
Target Start/End: Original strand, 25709408 - 25709570
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | |||| ||||| ||||||||||    ||| |||||||| |||| |    
T  25709408 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtattggaacttgttcatttcatattaaata---ggtagctttttaataaatta 25709504  T
Q  622 ctgttattt-tcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtta 686  Q
     |||| ||| |||||||||| ||| || ||||||||| |||||||| || |||||| |||||||||    
T  25709505 ttgttgtttatcaataaaaaattactacttttagttgatttaacatgtgcaatatttcacatgtta 25709570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 46290179 - 46290011
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  46290179 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 46290083  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || ||| |||||||||||| ||||||    
T  46290082 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaattttgcacatgttagacaaac 46290011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 4969942 - 4969773
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  4969942 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttaaataaataa 4969846  T
Q  622 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     | |  |||| ||| |||||| || || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  4969845 ttatagttttccaagaaaaagctactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 4969773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 19889509 - 19889341
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||||||| || ||||||    
T  19889509 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatat---gtaactttt-aataaataa 19889414  T
Q  622 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| || |||||||||||||||| ||||||    
T  19889413 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 19889341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 584 - 693
Target Start/End: Complemental strand, 19868221 - 19868114
Alignment:
Q  584 attttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacat 682  Q
    |||||||||||||||||   ||||||||| | |||||| || | |||| |||| |||| ||| || |||||||||| ||||||| || ||||||||||||    
T  19868221 attttatattaaatata---taactttttgataaataattggtgtttttcaatgaaaatttactacttttagttgtcttaacatgtgcaatattgcacat 19868125  T
Q  683 gttaaacaaac 693  Q
    |||| ||||||    
T  19868124 gttagacaaac 19868114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 34270430 - 34270266
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  34270430 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 34270334  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||||||| ||     ||||||||   ||||||| || |||||||||||||||| ||||||    
T  34270333 ttgttggtttcaataaaaactt----cttttagttaccttaacatgtgcaatattgcacatgttagacaaac 34270266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 9332130 - 9331962
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||| ||| | ||| |||    
T  9332130 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatat---gtaacatttaatcaa-taa 9332035  T
Q  622 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||| ||||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  9332034 ttgttgattttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 9331962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 23982764 - 23982933
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| ||| |||||||| || ||| | |||| ||||| |||  | ||||  ||||||||||||||||    ||| ||||||| || |||    
T  23982764 tcatgtgcaaatttgcacacgttaagaaatttaaagtagtaactttgacttggaacttgtgtattttatattaaatatt---taagtttttaataattaa 23982860  T
Q  622 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||| ||| |||||||| || |||||||||  ||||||| | ||||||||||||||||| ||||||    
T  23982861 ttgttggttttgaatgaaaagttactacttttagttgccttaacatgtataatattgcacatgttagacaaac 23982933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 600
Target Start/End: Complemental strand, 33072150 - 33072072
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 600  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  ||||| ||||||| |||||||||||    
T  33072150 tcatgtgcaaatttgtacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatata 33072072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 693
Target Start/End: Original strand, 47707911 - 47708065
Alignment:
Q  540 atgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-attttcaataaa 638  Q
    |||||||||| || ||||| |||| |||||||||  | || |||||||| |||||||||||   ||||||||||| |||||| ||||  ||||| |||||    
T  47707911 atgttaagaagtttaaaatagtaattttgaattgaaacttatacattttgtattaaatata---taactttttaataaataattgttgtttttccataaa 47708007  T
Q  639 aagttattaattt---tagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |  || ||| |||   ||||||||||||||| ||||| |||||| ||| || ||||||    
T  47708008 atcttgttacttttagtagttgttttaacatgtgtaacattgcatatgatagacaaac 47708065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 576 - 666
Target Start/End: Original strand, 3530177 - 3530264
Alignment:
Q  576 atttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacat 666  Q
    |||||| |||||||||| |||||||   ||| ||||||| |||||| |||| ||||||||||||| |||||| | ||| ||| ||||||||    
T  3530177 atttgtgcattttatatcaaatata---taattttttaataaataattgttgttttcaataaaaaattattattcttaattgctttaacat 3530264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 522 - 666
Target Start/End: Original strand, 8091321 - 8091463
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||  |||||||||||| || ||||| |||| |||| ||||  | || |||||||| | |||||||||   ||||||||||| ||||||    
T  8091321 tcatgtgcaaatttacacatgttaagaagtttaaaatagtaactttgcattgtaacttttacattttgtgttaaatata---taactttttaataaataa 8091417  T
Q  622 ctgtt-attttcaataaaaagttattaattttagttgttttaacat 666  Q
     | || |||||||||||||| ||  || ||||||||| ||| ||||    
T  8091418 ttattgattttcaataaaaatttgctacttttagttgctttgacat 8091463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 568
Target Start/End: Original strand, 26050470 - 26050516
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttg 568  Q
    |||||| |||||||| |||||||||||| || |||||||||||||||    
T  26050470 tcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttg 26050516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 568
Target Start/End: Original strand, 26059829 - 26059875
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttg 568  Q
    |||||| |||||||| |||||||||||| || |||||||||||||||    
T  26059829 tcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttg 26059875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 600
Target Start/End: Original strand, 29398143 - 29398221
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 600  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    
T  29398143 tcatgttcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata 29398221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 693
Target Start/End: Complemental strand, 24250379 - 24250314
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  24250379 ttttcaatgaaaagttaatacttttagtttccttaacatgtgcaatattgcacatgttagacaaac 24250314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 693
Target Start/End: Original strand, 29398227 - 29398292
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||| |||| ||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  29398227 ttttcaatgaaaaattagtattattagttgttttaacatgtgcaatgttgcacatgttagacaaac 29398292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 5e-27; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 26682237 - 26682068
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | |||| |||||||||||||||   ||||| |||||||| ||||||    
T  26682237 tcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaat---gtgtagctttttaataaataa 26682141  T
Q  622 ctgttattttcaataaaaag-ttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||| |||||||||||||  ||| || |||||||||||||||||| || |||||||||||||||| ||||||    
T  26682140 ttgttgttttcaataaaaaaattactacttttagttgttttaacatgtgcaatattgcacatgttagacaaac 26682068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 6818186 - 6818017
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| ||||| ||| || |  | |||| ||||||||||||| ||||    |||||||||| ||||||    
T  6818186 tcatgtgcaaatttgtacatgttaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataa---aactttttaataaataa 6818090  T
Q  622 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||| |||| ||||  ||||||| || ||||||||  ||||||||||  |||||||||||||||| ||||||    
T  6818089 ttgttctttttcaatgtaaagttactatttttagttcctttaacatatacaatattgcacatgttagacaaac 6818017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 31812282 - 31812113
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||| ||||||| || |||||||||| ||||| |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  31812282 tcatgtgcaaatttgcacatattaagaagtttaaaatggtaattttgacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 31812186  T
Q  622 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     | ||| ||||||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  31812185 gttttatttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 31812113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 3306064 - 3306232
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| ||| |||||||   |||||||||   ||||||    
T  3306064 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtatcaaatata---taactttttgttaaataa 3306160  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||||||| ||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  3306161 ttgttggtttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 3306232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 20514802 - 20514632
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| || ||||| ||| |||||||| || |||||||||| ||||  |||  | |||||||||||||||||||||||   ||||||||||| ||||||    
T  20514802 tcatgtgcatatttgcacaggttaagaaatttaaaatggtaagtttgtcttggaacttgtacattttatattaaatata---taactttttaataaataa 20514706  T
Q  622 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaata-ttgcacatgttaaacaaac 693  Q
     || || |||||||||| || ||| || ||| ||||| |||| ||| || |||| |||||||||||| ||||||    
T  20514705 ttggtatttttcaataagaaattactactttaagttgctttaccatgtgcaatatttgcacatgttagacaaac 20514632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 2161556 - 2161388
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| |||||||  ||||||||||   |||||||||   ||||||    
T  2161556 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgaattaaatata---taactttttgttaaataa 2161460  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  2161459 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 2161388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 628 - 693
Target Start/End: Complemental strand, 7750733 - 7750668
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||||||||||||  || |||||||||||||||||| || |||||||||||||||| ||||||    
T  7750733 ttttcaataaaaagttgctacttttagttgttttaacatgtgcaatattgcacatgttagacaaac 7750668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 529 - 693
Target Start/End: Complemental strand, 12132145 - 12131983
Alignment:
Q  529 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgt-ta 627  Q
    |||| ||| |||||||||||| || ||| | |||| |||| ||||  | ||| |||||||||||||||||||   ||||||||||| |||||  |||       
T  12132145 caaacttgcacatgttaagaaatttaaagtagtaagtttgtattggaacttgaacattttatattaaatata---taactttttaataaatacttgtggt 12132049  T
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||||||||||||  || ||||||||  |||||||| || ||| |||||||||||| ||||||    
T  12132048 ttttcaataaaaagttgctacttttagtttctttaacatgtgcaatgttgcacatgttagacaaac 12131983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 9580118 - 9580287
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||  |||||||||||| || ||||| | || |||| ||||  | |||||||||| |||||||||||| | |   |||| || ||||||    
T  9580118 tcatgtgcaaatttacacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataattt---ttttgaataaataa 9580214  T
Q  622 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||| |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||| ||| ||||||    
T  9580215 ttgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatattagacaaac 9580287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 586 - 693
Target Start/End: Original strand, 14816198 - 14816303
Alignment:
Q  586 tttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 684  Q
    ||||||||||||||   |||| ||||||| || ||| ||||  ||||||||||||||||| || ||||||||  |||||||| || ||||||||||||||    
T  14816198 tttatattaaatat---gtaaatttttaataattaattgttggttttcaataaaaagttactacttttagtttctttaacatgtgcaatattgcacatgt 14816294  T
Q  685 taaacaaac 693  Q
    || ||||||    
T  14816295 tagacaaac 14816303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 586 - 693
Target Start/End: Complemental strand, 14829542 - 14829437
Alignment:
Q  586 tttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 684  Q
    ||||||||||||||   |||| ||||||| || ||| ||||  ||||||||||||||||| || ||||||||  |||||||| || ||||||||||||||    
T  14829542 tttatattaaatat---gtaaatttttaataattaattgttggttttcaataaaaagttactacttttagtttctttaacatgtgcaatattgcacatgt 14829446  T
Q  685 taaacaaac 693  Q
    || ||||||    
T  14829445 tagacaaac 14829437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 578 - 693
Target Start/End: Complemental strand, 38843817 - 38843704
Alignment:
Q  578 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatatt 676  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| ||||| || ||||||||| || | |||||||||||||||| || ||| ||    
T  38843817 ttgtacatttaatattaaatataa---aacttttgaataaataattgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgtt 38843721  T
Q  677 gcacatgttaaacaaac 693  Q
    |||||||||| ||||||    
T  38843720 gcacatgttagacaaac 38843704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 628 - 693
Target Start/End: Complemental strand, 11923080 - 11923015
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||||||||||||| | ||| |||||||||||| | || |||||||||||||||| ||||||    
T  11923080 ttttcaataaaaagttatcattttcagttgttttaacttgtgcaatattgcacatgttagacaaac 11923015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 628 - 693
Target Start/End: Complemental strand, 38527886 - 38527821
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||| ||||||||||| |||||||||  ||||||| || |||||||||||||||| ||||||    
T  38527886 ttttcaatgaaaagttattacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 38527821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 522 - 657
Target Start/End: Original strand, 39024866 - 39024998
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  |||||| ||||||||||||| ||   ||||  ||||||| || |||    
T  39024866 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgcattttatattaacta---tgtagatttttaataattaa 39024962  T
Q  622 ctgttattttcaataaaaagttattaattttagttg 657  Q
     ||||  ||||||||||||||||||| |||||||||    
T  39024963 ttgttggtttcaataaaaagttattacttttagttg 39024998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 12189597 - 12189766
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaacttttt-aacaaata 620  Q
    |||||| |||||||| ||||| |||||| || ||||| | || |||  ||||  | |||||||||| ||||||||||||    || ||||| || |||||    
T  12189597 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatata----aattttttgaataaata 12189692  T
Q  621 actgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    | |||| |||| ||| ||||||||| || | |||||||||||||||| || |||  ||||||||||||||||||    
T  12189693 attgttgtttttcaagaaaaagttaatactcttagttgttttaacatgtgcaatgctgcacatgttaaacaaac 12189766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 12434025 - 12434194
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaacttttt-aacaaata 620  Q
    |||||| |||||||| ||||| |||||| || ||||| | || |||  ||||  | |||||||||| ||||||||||||    || ||||| || |||||    
T  12434025 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatata----aattttttgaataaata 12434120  T
Q  621 actgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    | |||| |||| ||| ||||||||| || | |||||||||||||||| || |||  ||||||||||||||||||    
T  12434121 attgttgtttttcaagaaaaagttaatactcttagttgttttaacatgtgcaatgctgcacatgttaaacaaac 12434194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 578 - 664
Target Start/End: Original strand, 34741730 - 34741813
Alignment:
Q  578 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaac 664  Q
    |||| ||||||||||||||||||   ||| ||||||| |||||| | || |||||||| ||||||| ||| ||||||||||||||||    
T  34741730 ttgtgcattttatattaaatata---taattttttaataaataattattgttttcaattaaaagttgttatttttagttgttttaac 34741813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 607 - 693
Target Start/End: Original strand, 8284660 - 8284747
Alignment:
Q  607 ctttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||| |||||| |||| ||||  |||||||||||| || ||||||||| |||||||| || |||| ||||||||||| ||||||    
T  8284660 ctttttaataaataattgttcttttttaataaaaagttactacttttagttgctttaacatgtgcaatactgcacatgttagacaaac 8284747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 529 - 693
Target Start/End: Complemental strand, 45006131 - 45005970
Alignment:
Q  529 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 628  Q
    |||||||| |||||||||||| || ||||| | || |||| ||||  |  ||||||| | ||||||||||||    ||||||| || |||||| |||| |    
T  45006131 caaatttgcacatgttaagaagtttaaaatag-aattttgtattggaacatgtacatctaatattaaatataa---aacttttgaataaataattgttgt 45006036  T
Q  629 tttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  45006035 tttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 45005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 608 - 685
Target Start/End: Complemental strand, 5298157 - 5298077
Alignment:
Q  608 tttttaacaaataactgttattttcaataaaaag---ttattaattttagttgttttaacatatgtaatattgcacatgtt 685  Q
    ||||||| |||||| |||| |||||||||||||    || ||| ||||||| |||||||||| ||||||||||||||||||    
T  5298157 tttttaataaataattgttgttttcaataaaaaaaatttgttagttttagtagttttaacatgtgtaatattgcacatgtt 5298077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 13327950 - 13328118
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||| ||| | ||| |||    
T  13327950 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatat---gtaacatttaatcaa-taa 13328045  T
Q  622 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||| |||||||| || ||||||||   |||||||||| |||||||||||||||| ||||||    
T  13328046 ttgttggttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgcacatgttagacaaac 13328118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 586 - 693
Target Start/End: Original strand, 35678347 - 35678452
Alignment:
Q  586 tttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 684  Q
    ||||||||||||||   |||| ||||||| || ||| ||||  |||||||| |||||||| || ||||||||  |||||||| || ||||||||||||||    
T  35678347 tttatattaaatat---gtaaatttttaataattaattgttggttttcaatgaaaagttactacttttagtttctttaacatgtgcaatattgcacatgt 35678443  T
Q  685 taaacaaac 693  Q
    || ||||||    
T  35678444 tagacaaac 35678452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 36967079 - 36967248
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | ||| |||||| ||||||||||||    ||||||| || | ||||    
T  36967079 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaactttgtattgaaacttgcacatttaatattaaatata---aaacttttgaatatataa 36967175  T
Q  622 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||| |||| ||| ||||||||| || | |||||||| ||||||| |  ||| |||||||||||| ||||||    
T  36967176 ttgttgttttccaagaaaaagttactactattagttgtcttaacatgtacaatgttgcacatgttagacaaac 36967248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 693
Target Start/End: Original strand, 7140571 - 7140636
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||||||||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  7140571 ttttcaataaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 7140636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 693
Target Start/End: Complemental strand, 9825024 - 9824959
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||||||||||||| |||||||| |||  |||||||||  ||||||||| |||||| ||||||    
T  9825024 ttttcaataaaaagttactaattttaattgcattaacatatacaatattgcatatgttagacaaac 9824959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 579 - 673
Target Start/End: Original strand, 16445801 - 16445893
Alignment:
Q  579 tgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaat 673  Q
    ||||||||| ||||||||||||    ||||||| || |||||| |||| ||||| || ||||||||| || | |||||||||||||||||||||||    
T  16445801 tgtacatttaatattaaatataa---aacttttgaataaataattgttgttttccaagaaaaagttactactattagttgttttaacatatgtaat 16445893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 693
Target Start/End: Original strand, 40210933 - 40210998
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||| |||||||| || ||||||||   |||||||||| |||||||||||||||| ||||||    
T  40210933 ttttcaatgaaaagttaatacttttagttaccttaacatatgcaatattgcacatgttagacaaac 40210998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 632 - 692
Target Start/End: Original strand, 11947016 - 11947076
Alignment:
Q  632 caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 692  Q
    |||||||||||||| | |||||||||||||||| | || ||||||| |||||||| |||||    
T  11947016 caataaaaagttatcatttttagttgttttaacttgtgcaatattgtacatgttagacaaa 11947076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 585 - 693
Target Start/End: Complemental strand, 9743967 - 9743862
Alignment:
Q  585 ttttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatg 683  Q
    |||||||||||||||   ||||||||| || |||||| ||||  ||||||||||||| ||| || |||||||||| |||||||    |||||||||||||    
T  9743967 ttttatattaaatat---gtaactttt-aataaataattgttggttttcaataaaaaattactacttttagttgtcttaacatgcacaatattgcacatg 9743872  T
Q  684 ttaaacaaac 693  Q
    ||| ||||||    
T  9743871 ttagacaaac 9743862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 578 - 686
Target Start/End: Original strand, 10974619 - 10974725
Alignment:
Q  578 ttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatatt 676  Q
    |||||||||||||||||||||   ||||| ||||||| |||||  | ||  |||||||||||| |||| || ||||||||| ||||||||||  |||| |    
T  10974619 ttgtacattttatattaaata---tgtaattttttaataaatagttattgtttttcaataaaatgttactacttttagttgctttaacatatacaatagt 10974715  T
Q  677 gcacatgtta 686  Q
    ||| ||||||    
T  10974716 gcatatgtta 10974725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 522 - 691
Target Start/End: Original strand, 28014867 - 28015032
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  28014867 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttgaataaataa 28014963  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 691  Q
     |||| |||| || ||||||||| |    | |||| ||||||| | ||||| ||||||||||||| ||||    
T  28014964 ttgttgtttt-aaaaaaaagttactgcaataagttattttaacttgtgtaacattgcacatgttagacaa 28015032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 600
Target Start/End: Original strand, 2083078 - 2083156
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 600  Q
    |||||| |||||||  |||| ||||||| ||||||||   ||||||| ||||  |||||| ||||||||||||||||||    
T  2083078 tcatgtgcaaatttacacatcttaagaagttcaaaataacaaatttgtattgaaatttgttcattttatattaaatata 2083156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 647 - 693
Target Start/End: Original strand, 11117129 - 11117175
Alignment:
Q  647 aattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||||||| |||||||| || |||||||||||||||| ||||||    
T  11117129 aattttagttgctttaacatgtgcaatattgcacatgttagacaaac 11117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 26834730 - 26834561
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| | || ||||||| || |||||||||| ||||| |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  26834730 tcatgtgcaaatttgcatatattaagaaatttaaaatggtaattttgacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 26834634  T
Q  622 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     | ||  ||||||||||||| ||| || |||||| | | ||| ||| || ||| ||||| |||||| ||||||    
T  26834633 gttttgtttttcaataaaaaattactacttttagatatcttagcatgtgcaatgttgcatatgttagacaaac 26834561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 582 - 693
Target Start/End: Complemental strand, 32186295 - 32186186
Alignment:
Q  582 acattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcac 680  Q
    |||||| ||||||||||||    ||||||| || | |||| |||| ||||| || ||||||||| || | |||||||||||||||| || ||| |||| |    
T  32186295 acatttaatattaaatataa---aacttttgaatatataaatgttgttttctaagaaaaagttactactattagttgttttaacatttgcaatgttgctc 32186199  T
Q  681 atgttaaacaaac 693  Q
    |||||||||||||    
T  32186198 atgttaaacaaac 32186186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 695
Target Start/End: Complemental strand, 37523806 - 37523756
Alignment:
Q  645 ttaattttagttgttttaacatatgtaatattgcacatgttaaacaaacaa 695  Q
    |||||||||| ||||||||||| || ||||||| |||||||| ||||||||    
T  37523806 ttaattttagctgttttaacatgtgcaatattgtacatgttagacaaacaa 37523756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 651 - 693
Target Start/End: Original strand, 38213081 - 38213123
Alignment:
Q  651 ttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||||||||||| || ||| |||||||||||||||||||    
T  38213081 ttagttgttttaacatgtgcaatgttgcacatgttaaacaaac 38213123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 608 - 666
Target Start/End: Complemental strand, 44091404 - 44091346
Alignment:
Q  608 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacat 666  Q
    ||||||| |||||| |||| ||||||||||||| ||| || |||| |||||||||||||    
T  44091404 tttttaataaataattgttgttttcaataaaaaattaatacttttcgttgttttaacat 44091346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 693
Target Start/End: Complemental strand, 10129169 - 10129104
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||| |||| ||| |||||||||||   ||||||| || |||||||||||||||| ||||||    
T  10129169 ttttcaatgaaaaattactaattttagttaccttaacatgtgcaatattgcacatgttagacaaac 10129104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 693
Target Start/End: Complemental strand, 12346071 - 12346006
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||| ||||||||| || | ||| |||||||||||| |||||| |||||||||| | ||||||    
T  12346071 ttttcaagaaaaagttactactattaattgttttaacatgtgtaatgttgcacatgtcagacaaac 12346006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 609 - 666
Target Start/End: Complemental strand, 45516373 - 45516316
Alignment:
Q  609 ttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacat 666  Q
    |||||| |||||| ||||| |||||||||||||||| || |||||||| | |||||||    
T  45516373 ttttaataaataattgttagtttcaataaaaagttactacttttagttatcttaacat 45516316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 3e-19; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 523 - 693
Target Start/End: Original strand, 15411632 - 15411800
Alignment:
Q  523 catgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataac 622  Q
    ||||| |||||||| |||||||||||| || ||||| |||| ||||  |||  | |||| |||||||||||||||||   ||| |||||||| |||| |     
T  15411632 catgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatat---gtagctttttaataaattat 15411728  T
Q  623 tgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||| |||| ||||||||| ||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  15411729 tgttgtttttcaataaaaaattactacttttagttactttaacatgtgcaatattgcacatgttagacaaac 15411800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 9747486 - 9747317
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||  |||||||||||| || ||||| |||| ||||  |||  | |||| |||||||||||||||||   ||| |||||| |||||||     
T  9747486 tcatgtgcaaattttcacatgttaagaagtttaaaatagtaattttgtcttggaacttgttcattttatattaaatat---gtagcttttttacaaatag 9747390  T
Q  622 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||| |||| ||||||| ||||| || ||||||||  |||||||| |||| |||||||||||||| ||||||    
T  9747389 ttgttgtttttcaataaatagttactacttttagttaatttaacatgtgtactattgcacatgttagacaaac 9747317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 529 - 693
Target Start/End: Original strand, 5583574 - 5583735
Alignment:
Q  529 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 628  Q
    |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   |||||| ||||      
T  5583574 caaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataattgttgg 5583670  T
Q  629 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  5583671 tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 5583735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 14377593 - 14377425
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||||||| |||||||||    
T  14377593 tcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatat---gtaactttt-aacaaataa 14377498  T
Q  622 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  ||||||||||||||||| || |||||||||  ||||||| || |||||||||| ||||| ||||||    
T  14377497 ttgttggttttcaataaaaagttactacttttagttgccttaacatgtgcaatattgcacgtgttagacaaac 14377425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 608 - 693
Target Start/End: Original strand, 12438740 - 12438825
Alignment:
Q  608 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||| |||||| ||||  ||| ||| ||||||||||| |||||||||| | |||||||| |||||||||||||||| ||||||    
T  12438740 tttttaataaataattgttggttttaatgaaaagttattatttttagttgtctgaacatatgcaatattgcacatgttatacaaac 12438825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 684
Target Start/End: Complemental strand, 45062367 - 45062207
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||| ||||||| |||||||| |||| |||   |||  | |||| |||||||||||||| ||   |||||||||||| ||||||    
T  45062367 tcatgtgcaaatttgcacatattaagaagttcaaaatagtaactttattttggaacttgtgcattttatattaaacat---gtaactttttaataaataa 45062271  T
Q  622 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 684  Q
     | || ||||  ||||||||||||  | ||||| |||||||||||||| |||||||| ||||||    
T  45062270 tttttgttttttaataaaaagttaccacttttaattgttttaacatatttaatattgtacatgt 45062207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 23932734 - 23932565
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| | || ||||||| || ||||| ||||| ||| || |  | |||| ||||||||||||| ||||    |||||||||| ||||||    
T  23932734 tcatgtgcaaatttgcatatattaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataa---aactttttaataaataa 23932638  T
Q  622 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||| |||| ||||  ||||||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  23932637 ttgttctttttcaatgtaaagttactatttttagttcctttaacatgtgcaatattgcacatgttagacaaac 23932565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 27665053 - 27665221
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||||||| || ||||||    
T  27665053 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatat---gtaactttt-aataaataa 27665148  T
Q  622 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| || |||||||||||||||| ||||||    
T  27665149 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 27665221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 530 - 693
Target Start/End: Complemental strand, 43806521 - 43806360
Alignment:
Q  530 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 629  Q
    ||||||| ||||||||| || || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |||| ||    
T  43806521 aaatttgcacatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataa---aacttttgaataaataattgttgtt 43806425  T
Q  630 ttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||| || ||||||||| || | ||| |||||||||||| || ||| |||||||||||| ||||||    
T  43806424 ttccaagaaaaagttactactattaattgttttaacatgtgcaatgttgcacatgttagacaaac 43806360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 522 - 656
Target Start/End: Original strand, 24729586 - 24729718
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  ||||||| ||||| |||||| || |   ||||||||||| ||||||    
T  24729586 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgtatattttgtattaattaca---taactttttaataaataa 24729682  T
Q  622 ct-gttattttcaataaaaagttattaattttagtt 656  Q
     |  |||||||||||||||| ||| || ||||||||    
T  24729683 ttatttattttcaataaaaatttactatttttagtt 24729718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 693
Target Start/End: Original strand, 34213965 - 34214129
Alignment:
Q  529 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtta- 627  Q
    |||||||| |||||||||||| || ||||| |||| |||  ||||  | ||| ||||||| ||||||| ||| | ||||||||||  |||||| ||||      
T  34213965 caaatttgcacatgttaagaaatttaaaatagtaatttttcattggaacttgaacattttttattaaaaata-tataactttttataaaataattgttgg 34214063  T
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||||||||| ||| || ||||||||| |||||||| || | ||||  |||||||| ||||||    
T  34214064 ttttcaataaaaacttactatttttagttgctttaacatgtgcagtattatacatgttagacaaac 34214129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 585 - 693
Target Start/End: Complemental strand, 34817649 - 34817544
Alignment:
Q  585 ttttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 684  Q
    |||| |||||||||||   ||||||||||| |||||| |||| ||||||||||| ||||  || |||||||| |||||| |  || ||||||||| ||||    
T  34817649 ttttttattaaatata---taactttttaataaataattgttgttttcaataaatagttgatatttttagttattttaatacgtgcaatattgcatatgt 34817553  T
Q  685 taaacaaac 693  Q
    || ||||||    
T  34817552 tagacaaac 34817544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 604 - 693
Target Start/End: Complemental strand, 39367149 - 39367059
Alignment:
Q  604 taactttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||||||| |||||| | || |||||||||||||  || ||||||||||||| ||||||||| |||||  || |||||||| ||||||    
T  39367149 taactttttaataaataattattgattttcaataaaattttgttaattttagttgctttaacatacgtaatggtgtacatgttagacaaac 39367059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 7757795 - 7757963
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||  |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  7757795 tcatgtgcaaatttacacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 7757891  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  ||| |||||||| || ||| ||||||||   ||||||| |  ||| |||||||||||| ||||||    
T  7757892 ttgttggttttaataaaaacttgttacttttagttaccttaacatgtacaattttgcacatgttagacaaac 7757963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 693
Target Start/End: Complemental strand, 12016732 - 12016667
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||||||||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  12016732 ttttcaataaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 12016667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 538 - 640
Target Start/End: Original strand, 2579983 - 2580082
Alignment:
Q  538 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataa 637  Q
    |||||||||||| |||||| | |||| |||| ||||   |||||| ||||||| |||||||| |   || |||||||||||||| ||||||||| |||||    
T  2579983 acatgttaagaagttcaaactagtaagtttgtattgaattttgtatattttatgttaaatattg---aattttttaacaaataattgttatttttaataa 2580079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 7720180 - 7720116
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 692  Q
    ||||||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| |||||    
T  7720180 ttttcaaaaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaa 7720116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 522 - 598
Target Start/End: Original strand, 26003355 - 26003431
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaata 598  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  |||||||||||| ||||||||||    
T  26003355 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaatttgtacatttgatattaaata 26003431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 584 - 668
Target Start/End: Complemental strand, 2051721 - 2051639
Alignment:
Q  584 attttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatat 668  Q
    ||||||||||||||||    ||| ||||||| |||||| |||| |||| ||||||||| ||  |||||||||||||||||||||||    
T  2051721 attttatattaaatatt---taaatttttaataaataattgttgtttttcaataaaaacttgctaattttagttgttttaacatat 2051639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 693
Target Start/End: Original strand, 43388857 - 43388944
Alignment:
Q  607 ctttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||| |||||| |||| |||||||||||||| ||  || ||||||||| ||||| || || |||||||||||| ||| ||||||    
T  43388857 ctttttaataaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcacatattagacaaac 43388944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 19228594 - 19228426
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||| ||||||||||   ||||||||| | ||| |||    
T  19228594 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatat---gtaacttttaatcaa-taa 19228499  T
Q  622 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  19228498 ttgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 19228426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 578 - 693
Target Start/End: Original strand, 36612796 - 36612909
Alignment:
Q  578 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatatt 676  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| ||||| || ||||||||| || | |||||| |||||||||  | ||| ||    
T  36612796 ttgtacatttaatattaaatataa---aacttttgaataaataaatgttgttttccaaaaaaaagttactactattagttattttaacatgagcaatgtt 36612892  T
Q  677 gcacatgttaaacaaac 693  Q
    |||||||||| ||||||    
T  36612893 gcacatgttagacaaac 36612909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 578 - 693
Target Start/End: Original strand, 36620647 - 36620760
Alignment:
Q  578 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatatt 676  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| ||||| || ||||||||| || | |||||| |||||||||  | ||| ||    
T  36620647 ttgtacatttaatattaaatataa---aacttttgaataaataaatgttgttttccaaaaaaaagttactactattagttattttaacatgagcaatgtt 36620743  T
Q  677 gcacatgttaaacaaac 693  Q
    |||||||||| ||||||    
T  36620744 gcacatgttagacaaac 36620760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 643 - 693
Target Start/End: Original strand, 36909503 - 36909553
Alignment:
Q  643 tattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||| ||||| |||||||||||| |||||||||||| |||||| ||||||    
T  36909503 tattacttttaattgttttaacatgtgtaatattgcatatgttagacaaac 36909553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 627 - 693
Target Start/End: Original strand, 39904159 - 39904225
Alignment:
Q  627 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  39904159 attttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 39904225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 693
Target Start/End: Original strand, 4579901 - 4579966
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||| |||||||| ||  |||||||   ||||||| ||||||||||||||||||| ||||||    
T  4579901 ttttcaatgaaaagttactatatttagtttccttaacatgtgtaatattgcacatgttagacaaac 4579966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 693
Target Start/End: Complemental strand, 16755028 - 16754971
Alignment:
Q  636 aaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  16755028 aaaaagttactactattagttgttttaacatttgcaatgttgcacatgttagacaaac 16754971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 693
Target Start/End: Original strand, 16919266 - 16919331
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||| ||||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  16919266 ttttcaacaaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 16919331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 693
Target Start/End: Complemental strand, 22705520 - 22705455
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  22705520 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 22705455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 693
Target Start/End: Original strand, 26003612 - 26003669
Alignment:
Q  636 aaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  26003612 aaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 26003669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 6017025 - 6016856
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| ||||||||| || || ||| |||||| ||||| |||  | |||| ||||| ||||||||||||   ||||||||||| ||||||    
T  6017025 tcatgtgcaaatttgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatata---taactttttaaaaaataa 6016929  T
Q  622 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||| |||||||| || |||||| ||| ||| ||| || ||| |||||||||||| ||||||    
T  6016928 gtgttgtttttcaatgaaaagttactacttttagatgtcttaccatgtgcaatgttgcacatgttagacaaac 6016856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 540 - 693
Target Start/End: Complemental strand, 30623477 - 30623326
Alignment:
Q  540 atgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaa 638  Q
    |||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |||| |||| ||| |||    
T  30623477 atgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttgatattaaatataa---aacttttgaataaataattgttgtttttcaagaaa 30623381  T
Q  639 aagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||| || | |||||||||||||||| |||||| |||||||||||| ||||||    
T  30623380 aagttactactattagttgttttaacatgtgtaatgttgcacatgttagacaaac 30623326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 530 - 693
Target Start/End: Original strand, 8977483 - 8977644
Alignment:
Q  530 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 628  Q
    ||||||| || ||||||||| |||||||| ||||||||| ||||  | |||| ||||||||||||||||   |||||||||| || |||| | ||||  |    
T  8977483 aaatttgcacttgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaata---tgtaacttttcaataaatgattgttgtt 8977579  T
Q  629 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||| ||| |||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  8977580 tttcaattaaaggttgctacttttagtttccttaacatgtgcaatattgcacatgttagacaaac 8977644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 34692523 - 34692354
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  34692523 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttaaataaataa 34692427  T
Q  622 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     | |  |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  34692426 ttatagttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 34692354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 14228135 - 14228303
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  14228135 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 14228231  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||||||| ||  || ||||| ||   ||||||| || |||||||||||||||| ||||||    
T  14228232 ttgttggtttcaataaaaacttgctacttttaattaccttaacatgtgcaatattgcacatgttagacaaac 14228303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 28943778 - 28943946
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  28943778 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 28943874  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||||||| ||  || ||||| ||   ||||||| || |||||||||||||||| ||||||    
T  28943875 ttgttggtttcaataaaaacttgctacttttaattaccttaacatgtgcaatattgcacatgttagacaaac 28943946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 586 - 676
Target Start/End: Complemental strand, 29730383 - 29730295
Alignment:
Q  586 tttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatatt 676  Q
    |||||||||||||||   ||||||||||| ||||||||||| |||| ||||||||| |||||||||||| | | ||||||||||| ||||||    
T  29730383 tttatattaaatata---taactttttaataaataactgttgtttttcaataaaaacttattaattttaatagctttaacatatgcaatatt 29730295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 522 - 691
Target Start/End: Complemental strand, 10887198 - 10887031
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | ||||  |||||||||||||||   |||| |||||||| ||||||    
T  10887198 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgatttggaacttgtgtattttatattaaata---tgtagctttttaataaataa 10887102  T
Q  622 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 691  Q
     | ||  ||||||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||    
T  10887101 gttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaa 10887031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 693
Target Start/End: Complemental strand, 33017891 - 33017725
Alignment:
Q  524 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 623  Q
    |||| |||||||| ||||||||| || || ||||| |||| |||| || |  | ||| ||||||| |||||||||||   |||||||||   |||||| |    
T  33017891 atgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatata---taactttttgttaaataatt 33017795  T
Q  624 gttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||  ||| |||||||| ||  |||||||||||   ||||||| || |||||||||||||||| ||||||    
T  33017794 gttggttttaataaaaacttgctaattttagttaccttaacatgtgcaatattgcacatgttagacaaac 33017725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 538 - 693
Target Start/End: Original strand, 1017803 - 1017956
Alignment:
Q  538 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-attttcaata 636  Q
    |||||||||||| || ||| | |||| ||||| |||  | |||| ||||||||||||||||   ||||| ||||||| |||||| ||||  |||||||      
T  1017803 acatgttaagaagtttaaagtagtaactttgacttgaaagttgtgcattttatattaaata---tgtaaatttttaataaataattgttggttttcaacg 1017899  T
Q  637 aaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||| || |||||||| ||| | ||| || | |||||||||||||| ||||||    
T  1017900 aaaagttactacttttagttatttaatcatgtgcagtattgcacatgttagacaaac 1017956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 29863311 - 29863480
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| ||||| |||  | |  | || | ||||||||||||| ||||    |||||||||| ||||||    
T  29863311 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaaaattgtgtcggaacttttgcattttatattaactataa---aactttttaataaataa 29863407  T
Q  622 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     | || |||| ||||  ||||||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  29863408 ttattctttttcaatgtaaagttactatttttagttcctttaacatgtgcaatattgcacatgttagacaaac 29863480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 693
Target Start/End: Original strand, 1814894 - 1814959
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||||||||  | ||| ||||||||| |||||||| || |||||||||||||||| ||||||    
T  1814894 ttttcaataaaaatatgttacttttagttgctttaacatgtgcaatattgcacatgttagacaaac 1814959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 693
Target Start/End: Original strand, 3485711 - 3485776
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||||||||| |  |||||||||||  |||||||||||||||||| || |||||| ||||||    
T  3485711 ttttcaataaaaaggtgctaattttagttcctttaacatatgtaatattacatatgttagacaaac 3485776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 17552596 - 17552764
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| |||| | || ||||  | ||| ||||||| |||||||||||   ||| |||||   ||||||    
T  17552596 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattatgcattggaacttgaacattttgtattaaatata---taattttttgttaaataa 17552692  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||| ||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  17552693 ttgttggtttcgataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 17552764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 693
Target Start/End: Original strand, 24979262 - 24979327
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  24979262 ttttcaagaaaaagttactattattagttgttttaacatgtgcaatgttgcacatgttagacaaac 24979327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 691
Target Start/End: Complemental strand, 17596370 - 17596315
Alignment:
Q  636 aaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 691  Q
    ||||||||| || |||||||||| ||||||| || |||||||||||||||| ||||    
T  17596370 aaaaagttactacttttagttgtcttaacatgtgcaatattgcacatgttagacaa 17596315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 18332697 - 18332866
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||  |||||||||||| || ||| || ||| ||||| |||  | || | ||||| ||||||||||||   || |||||||| ||||||    
T  18332697 tcatgtgcaaattttcacatgttaagaagtttaaagtgataattttgacttggaacttatgcatttcatattaaatata---tagctttttaataaataa 18332793  T
Q  622 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     | || |||| ||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  18332794 gttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 18332866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 693
Target Start/End: Original strand, 5363005 - 5363070
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  5363005 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 5363070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 7e-17; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 30839950 - 30839782
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  30839950 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 30839854  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  30839853 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 30839782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 36597748 - 36597580
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  36597748 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 36597652  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  36597651 ttgttggtttcaataaaaatttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 36597580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 522 - 691
Target Start/End: Original strand, 8103589 - 8103755
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| ||||||||||||| |||   |||  ||||||| || |||    
T  8103589 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattat---gtagatttttaataattaa 8103685  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 691  Q
     ||||  |||||||||||||||| || |||||||||  ||||||| || |||||||||||||||| ||||    
T  8103686 ttgttggtttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaa 8103755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 529 - 693
Target Start/End: Original strand, 18841721 - 18841883
Alignment:
Q  529 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 628  Q
    |||||||| | ||||||| || || ||||| | || |||| ||||  |||||||||||| ||||||||||||    ||||||| || |||||| |||| |    
T  18841721 caaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaatttgtacatttaatattaaatataa---aacttttgaataaataattgttgt 18841817  T
Q  629 tttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  18841818 tttccaaaaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 18841883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 3398389 - 3398220
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  3398389 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttaaataaataa 3398293  T
Q  622 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     | |  |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  3398292 ttatagttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 3398220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 40513120 - 40512952
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    ||||||||||||||| ||||||||| || || ||||| |||| |||| ||||  ||||| | ||||| ||| |||||||   |||||||||   ||||||    
T  40513120 tcatgtacaaatttgcacatgttaaaaaatttaaaatagtaactttgcattggaatttgaatattttgtatcaaatata---taactttttgttaaataa 40513024  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||||||| ||| || || |||||   ||||||| || |||||||||||||||| ||||||    
T  40513023 ttgttgatttcaataaaaacttactacttctagttaccttaacatgtgcaatattgcacatgttagacaaac 40512952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 586 - 693
Target Start/End: Original strand, 5958196 - 5958301
Alignment:
Q  586 tttatattaaatatagtgtaactttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 684  Q
    ||||||||||||||   |||| ||||||| || ||| |||| ||||||||| |||| ||| || ||||||||  |||||||| |||||||||||||||||    
T  5958196 tttatattaaatat---gtaaatttttaataattaattgttgattttcaatgaaaaattactacttttagtttctttaacatgtgtaatattgcacatgt 5958292  T
Q  685 taaacaaac 693  Q
    || ||||||    
T  5958293 tagacaaac 5958301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 11636900 - 11636732
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| ||||| |||||||||||   |||| ||||||| || |||    
T  11636900 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatat---gtaaatttttaataattaa 11636805  T
Q  622 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||| |||||||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  11636804 ttgttggttttcaatgaaaagttactacttttagtttctttaacatgtgcaatattgcacatgttagacaaac 11636732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 522 - 631
Target Start/End: Original strand, 15240959 - 15241065
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| ||||||||| || ||||||||  |||||||| ||||  |||||| ||| ||||||||||||||   ||| ||||||| ||||||    
T  15240959 tcatgtgcaaatttgtacatgttaaaaagttcaaaatattaaatttgtattgaaatttgtgcatgttatattaaatata---taattttttaataaataa 15241055  T
Q  622 ctgttatttt 631  Q
     |||| ||||    
T  15241056 ttgttgtttt 15241065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 604 - 685
Target Start/End: Original strand, 10665053 - 10665134
Alignment:
Q  604 taactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtt 685  Q
    ||||||||||| |||||| |  |||||||||| ||||||||||| ||||||||   ||||||| || |||||| ||||||||    
T  10665053 taactttttaataaataattaatattttcaatgaaaagttattacttttagttaccttaacatgtgcaatattacacatgtt 10665134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 636 - 693
Target Start/End: Complemental strand, 11360243 - 11360186
Alignment:
Q  636 aaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||| ||| || |||||||||||||||||| |||||||||| |||||||||| ||||    
T  11360243 aaaaaattactacttttagttgttttaacatgtgtaatattgaacatgttaaataaac 11360186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 20058150 - 20058109
Alignment:
Q  456 tgttttgttcatgttcattagataattttatttgatgatgtt 497  Q
    ||||||| | ||||||||||||||||||||||||||||||||    
T  20058150 tgttttgatgatgttcattagataattttatttgatgatgtt 20058109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 649 - 693
Target Start/End: Original strand, 11250090 - 11250134
Alignment:
Q  649 ttttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||||| |||||||| || |||||||||||||||||||||||    
T  11250090 ttttagttgctttaacatgtgcaatattgcacatgttaaacaaac 11250134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 585 - 682
Target Start/End: Complemental strand, 28629984 - 28629890
Alignment:
Q  585 ttttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacat 682  Q
    |||||||||||||||   ||||||||| || |||||| ||||  |||||||| ||||||||||| ||||||||| |||||||| || ||||||| ||||    
T  28629984 ttttatattaaatat---gtaactttt-aataaataattgttggttttcaatgaaaagttattatttttagttgctttaacatgtgcaatattgtacat 28629890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 649 - 693
Target Start/End: Complemental strand, 33072721 - 33072677
Alignment:
Q  649 ttttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||||| |||||||| || |||||||||||||||||||||||    
T  33072721 ttttagttgatttaacatgtgcaatattgcacatgttaaacaaac 33072677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 2795692 - 2795524
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||| ||||||||||   ||||||||| | ||| |||    
T  2795692 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatat---gtaacttttaatcaa-taa 2795597  T
Q  622 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  2795596 ttgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 2795524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 11376026 - 11375972
Alignment:
Q  627 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcaca 681  Q
    ||||||||| |||||||| || ||||||||| |||||||| || |||||||||||    
T  11376026 attttcaatgaaaagttactacttttagttgctttaacatgtgcaatattgcaca 11375972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 538 - 600
Target Start/End: Complemental strand, 15820379 - 15820317
Alignment:
Q  538 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 600  Q
    |||||| ||||| |||||||| ||||||||| ||||  ||||| ||||||| |||||||||||    
T  15820379 acatgtcaagaaattcaaaatagtaaatttgtattgaaatttgaacattttctattaaatata 15820317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 614
Target Start/End: Original strand, 23995427 - 23995516
Alignment:
Q  524 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaa 614  Q
    |||| |||||||| |||||||||||| || ||||| |||| |||  ||||  | ||||||||||| ||||||||||| | |||||||||||    
T  23995427 atgtgcaaatttgtacatgttaagaagtttaaaatagtaattttatattgaaacttgtacattttgtattaaatata-tataactttttaa 23995516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 599
Target Start/End: Original strand, 31567507 - 31567577
Alignment:
Q  529 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatat 599  Q
    |||||||| ||||||||| || || |||||||||| ||||  |||  |||||| |||||||||||||||||    
T  31567507 caaatttgcacatgttaaaaaatttaaaatggtaattttgtcttgaaatttgttcattttatattaaatat 31567577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 627 - 693
Target Start/End: Complemental strand, 34578078 - 34578012
Alignment:
Q  627 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||||| |||| |||||| ||||||||   ||||||| || |||||||||||||||| ||||||    
T  34578078 attttcaatgaaaaattattacttttagttaccttaacatgtggaatattgcacatgttagacaaac 34578012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 583 - 666
Target Start/End: Original strand, 40309497 - 40309580
Alignment:
Q  583 cattttatattaaatatagtgtaactttttaacaaataactgttatttt---caataaaaagttattaattttagttgttttaacat 666  Q
    ||||||||||||||||||   ||||||||||| |||| | |||||||||   ||||||||  || ||| ||||||||||||||||||    
T  40309497 cattttatattaaatata---taactttttaataaattattgttatttttttcaataaaatattgttacttttagttgttttaacat 40309580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 693
Target Start/End: Original strand, 24014800 - 24014865
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||| |||||||| ||  || |||||||||||||||||| || ||| |||||||||||| ||||||    
T  24014800 ttttgaataaaaactttatacttttagttgttttaacatgtgcaatgttgcacatgttagacaaac 24014865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 7e-17; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 2571437 - 2571269
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  2571437 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 2571341  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  2571340 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 2571269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 10307935 - 10307767
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| ||||||||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  10307935 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaaatttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 10307839  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||||||| ||  || ||||||||   ||| ||| || |||||||||||||||| ||||||    
T  10307838 ttgttggtttcaataaaaatttgctacttttagttaccttatcatgtgcaatattgcacatgttagacaaac 10307767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 524 - 693
Target Start/End: Original strand, 54527717 - 54527884
Alignment:
Q  524 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 623  Q
    |||| |||||||| |||||||||||| || |||||   || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |    
T  54527717 atgtgcaaatttgcacatgttaagaaatttaaaatataaattttgtattggaacttgtacatttaatattaaatataa---aacttttgaataaataatt 54527813  T
Q  624 gttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||| ||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  54527814 gttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 54527884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 38389616 - 38389447
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  38389616 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 38389520  T
Q  622 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     | ||  ||||||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  38389519 gttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 38389447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 50204572 - 50204403
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  |  ||||||||| ||||||||||||    ||||||| || | ||||    
T  50204572 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacctgtacatttaatattaaatataa---aacttttgaatatataa 50204476  T
Q  622 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||||||||| || ||||| ||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  50204475 ttgttattttccaagaaaaaattactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 50204403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 585 - 694
Target Start/End: Complemental strand, 20938162 - 20938056
Alignment:
Q  585 ttttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatg 683  Q
    |||||||||||||||   |||| |||||||  ||||| ||||| |||||||||||||||||||| ||||||||   ||||||| || |||||||||||||    
T  20938162 ttttatattaaatat---gtaa-tttttaatcaataattgttagttttcaataaaaagttattacttttagttaccttaacatgtgcaatattgcacatg 20938067  T
Q  684 ttaaacaaaca 694  Q
    ||| |||||||    
T  20938066 ttagacaaaca 20938056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 522 - 691
Target Start/End: Original strand, 46492352 - 46492519
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||  ||| |||||||| || ||| | |||| |||| ||||  | ||||||||||| |||||||||||   |||||  |||| ||||||    
T  46492352 tcatgtgcaaattttcacacgttaagaaatttaaagtagtaactttgcattgaaacttgtacattttgtattaaatata---taactcgttaataaataa 46492448  T
Q  622 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 691  Q
     |||| |||| ||||||||| |||  | ||||||||| |||||||| || |||||||||||| ||||||||    
T  46492449 ttgttgtttttcaataaaaacttaccacttttagttgctttaacatgtgcaatattgcacattttaaacaa 46492519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 51618216 - 51618050
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| ||  |||| |||| |||| ||||  | ||||||||||| |||||||||||   ||   |||||| ||||||    
T  51618216 tcatgtgcaaatttgcacatgttaagaagtttcaaattgtaactttgcattggaacttgtacattttgtattaaatata---ta---ttttaataaataa 51618123  T
Q  622 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     |||| |||| || |||||| ||  |  |||||||||||||||||| || |||||||||||||||| ||||||    
T  51618122 ttgttgtttttcagtaaaaacttgctgcttttagttgttttaacatgtgcaatattgcacatgttagacaaac 51618050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 583 - 676
Target Start/End: Complemental strand, 53794872 - 53794781
Alignment:
Q  583 cattttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatatt 676  Q
    |||||||||||||||||   |||||||||||| |||| | ||||| ||||||||||| |||||||| ||||||||| |||||||| || ||||||    
T  53794872 cattttatattaaatat---gtaactttttaataaattattgttacttttcaataaatagttattatttttagttggtttaacatgtgcaatatt 53794781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 606 - 684
Target Start/End: Original strand, 2379162 - 2379238
Alignment:
Q  606 actttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 684  Q
    ||||||||| |||||| |||||||  ||||||||| ||| || |||||||||||||||||| || ||||||||||||||    
T  2379162 actttttaataaataattgttatt--caataaaaacttactacttttagttgttttaacatgtgcaatattgcacatgt 2379238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 532 - 661
Target Start/End: Original strand, 38786343 - 38786468
Alignment:
Q  532 atttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt 631  Q
    ||||| |||||||||||| || ||||| |||| ||||| |||  ||||||  |||||||| |||||   |||||  ||||||| |||||| |||||||||    
T  38786343 atttgcacatgttaagaagtttaaaatagtaattttgatttgaaatttgtggattttatactaaat---gtgtat-tttttaataaataattgttatttt 38786438  T
Q  632 caataaaaagttattaattttagttgtttt 661  Q
    ||||||||| ||| || |||||||||||||    
T  38786439 caataaaaaattactatttttagttgtttt 38786468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 11611083 - 11610915
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||||||| || ||||||    
T  11611083 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatat---gtaactttt-aataaataa 11610988  T
Q  622 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| || |||||||||||||||| ||||||    
T  11610987 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 11610915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 603 - 686
Target Start/End: Original strand, 24569324 - 24569408
Alignment:
Q  603 gtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtta 686  Q
    |||||||||||| |||||| || | |||| |||||||||||||||| || ||||||| ||||||| |  ||||||||||||||||    
T  24569324 gtaactttttaataaataattgatgtttttcaataaaaagttattatttgtagttgtcttaacatgtccaatattgcacatgtta 24569408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 608 - 691
Target Start/End: Complemental strand, 37444232 - 37444149
Alignment:
Q  608 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 691  Q
    ||||||| || ||| ||||  |||||||||||||||| || |||||||||  ||||||| || |||||||||||||||| ||||    
T  37444232 tttttaataattaattgttgatttcaataaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaa 37444149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 607 - 694
Target Start/End: Original strand, 40330381 - 40330468
Alignment:
Q  607 ctttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaaca 694  Q
    |||||||| |||| | |||| |||||||| |||||||| || ||||| |||||||| |||  ||||| ||||| ||||||||||||||    
T  40330381 ctttttaataaattattgttgttttcaattaaaagttactatttttaattgttttatcatgcgtaatgttgcatatgttaaacaaaca 40330468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 530 - 693
Target Start/End: Complemental strand, 13495455 - 13495294
Alignment:
Q  530 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 628  Q
    ||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| |||||||||||||||||   |||  ||||||| |||||| |||| ||    
T  13495455 aaatttgcacatgataagaagtttaaagtagtaattttgacttggaacttgtgcattttatattaaatat---gtaggtttttaataaataattgttgat 13495359  T
Q  629 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||||||| ||| || ||||||||   ||||||| || ||  |||||||||||| ||||||    
T  13495358 tttcaataaaaaattactacttttagttaccttaacatgtgcaaatttgcacatgttagacaaac 13495294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 530 - 693
Target Start/End: Complemental strand, 42180213 - 42180052
Alignment:
Q  530 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 629  Q
    ||||||| |||||||||||| || |||||   || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| | |  ||    
T  42180213 aaatttgcacatgttaagaagtttaaaataaaaattttgtattggaacttgtacatttaatattaaatataa---aacttttaaataaataattatagtt 42180117  T
Q  630 ttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  42180116 ttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 42180052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 605 - 693
Target Start/End: Original strand, 37055455 - 37055544
Alignment:
Q  605 aactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||||| |||||| |||| |||| ||||  ||||||| || ||||||||  ||||||||||| ||||||| |||||||| ||||||    
T  37055455 aactttttaataaataattgttctttttcaatgtaaagttactatttttagttcctttaacatatgcaatattgtacatgttagacaaac 37055544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 604 - 693
Target Start/End: Complemental strand, 47387013 - 47386922
Alignment:
Q  604 taactttttaacaaataactgttatttt--caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    ||||||||||| |||||| |||| ||||  ||||||||| ||| || ||||||||| ||||| ||  | |||||||||||||||| ||||||    
T  47387013 taactttttaataaataattgtttttttttcaataaaaacttactacttttagttgctttaatatgcgcaatattgcacatgttagacaaac 47386922  T

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Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 524 - 600
Target Start/End: Complemental strand, 51401607 - 51401531
Alignment:
Q  524 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 600  Q
    ||||||||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    
T  51401607 atgtacaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata 51401531  T

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Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 693
Target Start/End: Original strand, 8497550 - 8497601
Alignment:
Q  642 ttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||| |||||||||||||||||| || ||| |||||||||||||| ||||    
T  8497550 ttattacttttagttgttttaacatgtgcaatgttgcacatgttaaataaac 8497601  T

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Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 522 - 686
Target Start/End: Complemental strand, 45983675 - 45983516
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| ||| |||||||| || ||||| | || |||  ||||  | |||||||||| ||||||||||||   | |||||| |||||||||    
T  45983675 tcatgtgcaaatttgcacaggttaagaagtttaaaatagaaattttatattgaaacttgtacatttaatattaaatata---ttacttttgaacaaataa 45983579  T
Q  622 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtta 686  Q
     |||| ||   || ||||||||| || | ||| ||||||||||  ||||||| ||||||||||||    
T  45983578 ttgtttttcaaaaaaaaaagttactactattaattgttttaac--atgtaatgttgcacatgtta 45983516  T

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Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 693
Target Start/End: Original strand, 46845531 - 46845618
Alignment:
Q  607 ctttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||| |||||| |||| |||||||||||||| ||  || ||||||||| ||||| || || |||||||||||| ||| ||||||    
T  46845531 ctttttaataaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcacatattagacaaac 46845618  T

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Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 608 - 682
Target Start/End: Original strand, 13879899 - 13879973
Alignment:
Q  608 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacat 682  Q
    ||||||| |||||| |||  |||||||||||||||| | | ||| |||| |||||| || |||||||||||||||    
T  13879899 tttttaataaataattgtggttttcaataaaaagttttcactttcagttattttaagatgtgtaatattgcacat 13879973  T

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Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 568
Target Start/End: Complemental strand, 25633167 - 25633121
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttg 568  Q
    |||||| ||||||||||| ||||||||| |||||||| |||||||||    
T  25633167 tcatgtgcaaatttgaacttgttaagaagttcaaaatagtaaatttg 25633121  T

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Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 628 - 694
Target Start/End: Original strand, 26200733 - 26200799
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaaca 694  Q
    |||||| |||||||||| || |  |||||| ||||||||||| ||||||||| |||||| |||||||    
T  26200733 ttttcagtaaaaagttactactcctagttgctttaacatatgcaatattgcaaatgttatacaaaca 26200799  T

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Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 693
Target Start/End: Original strand, 12515491 - 12515651
Alignment:
Q  530 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 629  Q
    ||||||| ||||||||| || || ||||| |||| |||| || |  | ||| ||||||| |||||||||||   |||||||||   |||||| ||||  |    
T  12515491 aaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatata---taactttttgttaaataattgttggt 12515587  T
Q  630 ttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    || |||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  12515588 tttaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 12515651  T

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Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 522 - 599
Target Start/End: Complemental strand, 23523115 - 23523038
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatat 599  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | |||| ||||| |||||||||||    
T  23523115 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatat 23523038  T

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Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 609 - 693
Target Start/End: Original strand, 30214103 - 30214187
Alignment:
Q  609 ttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||| |||||| |||| ||||||||| |||||||| || |||||||||  |||  || ||||||||||||||||||| ||||||    
T  30214103 ttttaataaataattgttgattttcaatgaaaagttacta-ttttagttgccttagaatgtgtaatattgcacatgttagacaaac 30214187  T

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Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 693
Target Start/End: Original strand, 32321835 - 32321899
Alignment:
Q  628 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
    |||||||||||| |||  || |||||||| |||||||||||| |||||| ||||||||| ||||||    
T  32321835 ttttcaataaaa-gttgatatttttagttcttttaacatatgcaatattacacatgttatacaaac 32321899  T

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Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 600
Target Start/End: Complemental strand, 49396548 - 49396471
Alignment:
Q  523 catgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 600  Q
    ||||| |||||||| |||| ||||||| || ||| | |||||||||||||   |||| | ||||||||||||||||||    
T  49396548 catgtgcaaatttgtacatattaagaagtttaaagtagtaaatttgaattaaaatttatgcattttatattaaatata 49396471  T

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Target: scaffold0111 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 37123 - 37292
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||| || ||| ||||| |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  37123 tcatgtgcaaatttgcacatgttaagaagtttaaagtgataactttgacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 37219  T
Q  622 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     | ||  ||||||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  37220 gttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 37292  T

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Target: scaffold0631 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 649 - 692
Target Start/End: Complemental strand, 486 - 443
Alignment:
Q  649 ttttagttgttttaacatatgtaatattgcacatgttaaacaaa 692  Q
    ||||||||| |||||||| || ||||||||||||||||||||||    
T  486 ttttagttgatttaacatgtgcaatattgcacatgttaaacaaa 443  T

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Target: scaffold0129 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 578 - 686
Target Start/End: Original strand, 13723 - 13829
Alignment:
Q  578 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatatt 676  Q
    |||||||||  ||||||||||||    ||||||| || |||||||| || ||||| || ||||||||| || | |||||||||||||||| || ||| ||    
T  13723 ttgtacattaaatattaaatataa---aacttttaaataaataacttttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgtt 13819  T
Q  677 gcacatgtta 686  Q
    ||||||||||    
T  13820 gcacatgtta 13829  T

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Target: scaffold0618 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 608 - 666
Target Start/End: Original strand, 8506 - 8564
Alignment:
Q  608 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacat 666  Q
    ||||||| |||||| |||| ||||||||||||| ||| || |||| |||||||||||||    
T  8506 tttttaataaataattgttgttttcaataaaaaattaatacttttcgttgttttaacat 8564  T

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Target: scaffold0061 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 693
Target Start/End: Original strand, 52788 - 52956
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||| ||||||||||   ||||||||| | ||| |||    
T  52788 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatat---gtaacttttaatcaa-taa 52883  T
Q  622 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  52884 ttgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 52956  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 581 - 692
Target Start/End: Original strand, 94086 - 94195
Alignment:
Q  581 tacattttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgca 679  Q
    |||||||| |||||||||||  ||   ||||||| |||||| | ||| ||||||||||||| ||| || ||||||||| |||||||| || ||| |||||    
T  94086 tacattttgtattaaatatatagt---tttttaataaataattattagttttcaataaaaacttactacttttagttgatttaacatgtgcaatgttgca 94182  T
Q  680 catgttaaacaaa 692  Q
     |||||| |||||    
T  94183 tatgttagacaaa 94195  T

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Target: scaffold0017 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 145846 - 145678
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||| ||||||||||   ||||||||| | ||| |||    
T  145846 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatat---gtaacttttaatcaa-taa 145751  T
Q  622 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  145750 ttgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 145678  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 693
Target Start/End: Complemental strand, 13254 - 13086
Alignment:
Q  522 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 621  Q
    |||||| |||||||| |||||||||||| || ||||| |||| ||| | |||  ||||||   |||||||||||||||   ||| ||||| | |||  ||    
T  13254 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaatttggaatttgtgttttttatattaaatat---gtagcttttaatcaac-aa 13159  T
Q  622 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 693  Q
     ||||  |||||||| |||| ||| || ||||||||   |||||||||| |||||||||||||||| ||||||    
T  13158 ttgttggttttcaatgaaaaattactacttttagttaccttaacatatgcaatattgcacatgttagacaaac 13086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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