View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7703_low_9 (Length: 484)

Name: NF7703_low_9
Description: NF7703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7703_low_9
NF7703_low_9
[»] chr8 (69 HSPs)
chr8 (2-224)||(20091601-20091823)
chr8 (2-224)||(34665425-34665646)
chr8 (2-224)||(17841650-17841872)
chr8 (1-224)||(6108033-6108256)
chr8 (2-224)||(40779929-40780151)
chr8 (2-224)||(26041913-26042138)
chr8 (1-224)||(37985856-37986078)
chr8 (2-224)||(42754842-42755064)
chr8 (2-224)||(3596841-3597063)
chr8 (2-224)||(25581039-25581261)
chr8 (1-224)||(1645764-1645988)
chr8 (1-224)||(14128906-14129124)
chr8 (2-224)||(32064788-32065011)
chr8 (1-217)||(35353083-35353299)
chr8 (2-224)||(15187603-15187825)
chr8 (2-218)||(39772608-39772823)
chr8 (2-204)||(8453877-8454078)
chr8 (1-198)||(41819594-41819801)
chr8 (2-224)||(31347576-31347804)
chr8 (1-217)||(32393900-32394114)
chr8 (6-224)||(10044390-10044613)
chr8 (57-224)||(30055615-30055781)
chr8 (2-220)||(24844664-24844880)
chr8 (2-224)||(3890414-3890638)
chr8 (2-224)||(7022021-7022244)
chr8 (2-118)||(24211459-24211575)
chr8 (129-224)||(24211172-24211267)
chr8 (2-220)||(30834859-30835069)
chr8 (2-189)||(27835288-27835475)
chr8 (137-224)||(1503643-1503730)
chr8 (72-224)||(38017047-38017198)
chr8 (5-114)||(27782027-27782136)
chr8 (2-118)||(7017771-7017887)
chr8 (130-224)||(37132480-37132575)
chr8 (2-79)||(15972822-15972899)
chr8 (139-224)||(7017658-7017743)
chr8 (153-224)||(27782105-27782177)
chr8 (153-224)||(32064750-32064822)
chr8 (153-224)||(34665387-34665459)
chr8 (153-217)||(42755030-42755095)
chr8 (153-224)||(17841838-17841910)
chr8 (153-224)||(20091789-20091861)
chr8 (153-224)||(31347770-31347842)
chr8 (153-224)||(40780117-40780189)
chr8 (167-217)||(1886621-1886672)
chr8 (2-40)||(3817914-3817952)
chr8 (153-217)||(7021990-7022055)
chr8 (153-224)||(7017853-7017925)
chr8 (153-224)||(8453839-8453911)
chr8 (153-224)||(14128869-14128941)
chr8 (153-224)||(15187565-15187637)
chr8 (153-224)||(24844847-24844918)
chr8 (153-224)||(26042104-26042176)
chr8 (2-38)||(30055708-30055744)
chr8 (153-217)||(30835035-30835099)
chr8 (153-224)||(32393863-32393935)
chr8 (153-224)||(35353046-35353118)
chr8 (153-224)||(37986043-37986115)
chr8 (154-217)||(38016983-38017047)
chr8 (2-36)||(30834893-30834927)
chr8 (2-36)||(41819605-41819639)
chr8 (153-198)||(3597029-3597074)
chr8 (153-198)||(3890605-3890649)
chr8 (153-217)||(6108221-6108286)
chr8 (153-198)||(15972865-15972910)
chr8 (153-190)||(39772789-39772826)
chr8 (153-224)||(25581227-25581299)
chr8 (153-224)||(27835441-27835513)
chr8 (4-36)||(37132520-37132552)
[»] chr6 (39 HSPs)
chr6 (1-224)||(17705269-17705488)
chr6 (1-224)||(2309223-2309446)
chr6 (2-224)||(28675191-28675413)
chr6 (2-224)||(17175821-17176043)
chr6 (2-224)||(33696739-33696962)
chr6 (2-224)||(33695126-33695349)
chr6 (2-224)||(18365374-18365595)
chr6 (2-224)||(18370638-18370859)
chr6 (1-218)||(6031546-6031764)
chr6 (1-224)||(23290881-23291107)
chr6 (2-224)||(32702248-32702470)
chr6 (2-224)||(11548389-11548610)
chr6 (1-188)||(6127317-6127506)
chr6 (2-160)||(9752110-9752267)
chr6 (1-195)||(8515556-8515748)
chr6 (2-118)||(25986973-25987089)
chr6 (129-224)||(29693615-29693711)
chr6 (70-198)||(18889470-18889597)
chr6 (343-445)||(6434795-6434897)
chr6 (163-224)||(34238887-34238948)
chr6 (153-224)||(25986935-25987007)
chr6 (153-224)||(33695315-33695387)
chr6 (153-224)||(33696701-33696773)
chr6 (153-224)||(6127280-6127352)
chr6 (153-224)||(23291072-23291144)
chr6 (153-223)||(11548576-11548647)
chr6 (63-118)||(29693542-29693597)
chr6 (163-224)||(8515723-8515785)
chr6 (153-224)||(17176009-17176081)
chr6 (153-224)||(17705453-17705525)
chr6 (153-224)||(18365561-18365633)
chr6 (153-224)||(18370825-18370897)
chr6 (153-224)||(28675153-28675225)
chr6 (151-220)||(582531-582602)
chr6 (153-224)||(18889685-18889756)
chr6 (175-220)||(2121013-2121059)
chr6 (2-36)||(28675342-28675376)
chr6 (153-198)||(9752233-9752278)
chr6 (2-38)||(18889683-18889719)
[»] chr7 (38 HSPs)
chr7 (2-224)||(4974535-4974757)
chr7 (2-224)||(48880727-48880949)
chr7 (1-224)||(3962021-3962243)
chr7 (1-224)||(30848611-30848834)
chr7 (2-224)||(45637755-45637976)
chr7 (2-224)||(15329316-15329539)
chr7 (1-220)||(34482877-34483099)
chr7 (2-224)||(42611854-42612076)
chr7 (1-224)||(24395014-24395236)
chr7 (1-224)||(25167656-25167873)
chr7 (1-220)||(42696125-42696345)
chr7 (2-224)||(15577647-15577872)
chr7 (2-220)||(20009902-20010119)
chr7 (1-220)||(29737181-29737406)
chr7 (1-224)||(37476880-37477103)
chr7 (1-224)||(18037020-18037242)
chr7 (2-115)||(35444601-35444714)
chr7 (2-224)||(15238425-15238649)
chr7 (129-224)||(35445567-35445662)
chr7 (129-224)||(35876414-35876509)
chr7 (1-224)||(36790276-36790489)
chr7 (2-101)||(40880715-40880814)
chr7 (153-224)||(4974723-4974795)
chr7 (153-224)||(42611816-42611888)
chr7 (153-224)||(45637717-45637789)
chr7 (156-224)||(15577841-15577910)
chr7 (153-224)||(15329278-15329350)
chr7 (153-224)||(34482840-34482912)
chr7 (153-224)||(48880915-48880987)
chr7 (161-224)||(40880646-40880708)
chr7 (153-224)||(35444563-35444635)
chr7 (153-198)||(15238414-15238459)
chr7 (153-217)||(18036990-18037055)
chr7 (164-224)||(37477079-37477140)
chr7 (153-224)||(3961984-3962056)
chr7 (153-224)||(25167838-25167910)
chr7 (153-224)||(29737144-29737216)
chr7 (153-224)||(36790454-36790526)
[»] chr4 (63 HSPs)
chr4 (326-484)||(53763536-53763694)
chr4 (2-224)||(9088913-9089135)
chr4 (2-224)||(44893013-44893235)
chr4 (2-224)||(44893469-44893691)
chr4 (2-224)||(46441887-46442109)
chr4 (2-224)||(47290109-47290331)
chr4 (2-224)||(53123074-53123296)
chr4 (1-220)||(7744916-7745135)
chr4 (2-224)||(21802120-21802344)
chr4 (2-224)||(31078619-31078841)
chr4 (2-224)||(10442587-10442811)
chr4 (1-220)||(50156383-50156601)
chr4 (2-224)||(24128282-24128504)
chr4 (2-224)||(36073393-36073614)
chr4 (2-220)||(49387691-49387910)
chr4 (2-224)||(22199304-22199524)
chr4 (2-224)||(17655473-17655696)
chr4 (2-224)||(36072990-36073216)
chr4 (2-224)||(4751489-4751712)
chr4 (2-220)||(2624880-2625098)
chr4 (1-220)||(42671711-42671930)
chr4 (1-219)||(23964269-23964488)
chr4 (2-224)||(33530484-33530710)
chr4 (5-198)||(30563255-30563448)
chr4 (2-220)||(37934745-37934963)
chr4 (229-327)||(53763883-53763978)
chr4 (5-220)||(37219671-37219893)
chr4 (2-224)||(24392710-24392939)
chr4 (3-224)||(11314051-11314255)
chr4 (1-117)||(36073650-36073766)
chr4 (5-220)||(44744481-44744690)
chr4 (156-224)||(25063374-25063443)
chr4 (267-432)||(10655482-10655647)
chr4 (267-432)||(10869627-10869792)
chr4 (153-224)||(33530676-33530748)
chr4 (137-224)||(36073261-36073349)
chr4 (153-224)||(10442777-10442849)
chr4 (153-224)||(31078807-31078879)
chr4 (153-224)||(49387876-49387948)
chr4 (153-224)||(2624842-2624914)
chr4 (153-224)||(7745100-7745172)
chr4 (153-224)||(21802310-21802382)
chr4 (153-224)||(22199266-22199338)
chr4 (153-224)||(24392672-24392744)
chr4 (153-224)||(36072952-36073024)
chr4 (153-216)||(36073731-36073795)
chr4 (153-224)||(46441849-46441921)
chr4 (153-224)||(47290071-47290143)
chr4 (31-101)||(9111337-9111407)
chr4 (153-224)||(53123035-53123108)
chr4 (153-224)||(4751451-4751523)
chr4 (153-224)||(24128244-24128316)
chr4 (153-224)||(36073355-36073427)
chr4 (153-224)||(44893431-44893503)
chr4 (153-223)||(42671675-42671746)
chr4 (153-199)||(17655461-17655507)
chr4 (2-36)||(21802157-21802191)
chr4 (386-447)||(982660-982721)
chr4 (153-190)||(9088910-9088947)
chr4 (2-35)||(11314089-11314122)
chr4 (153-217)||(23964453-23964518)
chr4 (153-190)||(44893201-44893238)
chr4 (153-224)||(50156566-50156638)
[»] chr5 (40 HSPs)
chr5 (1-224)||(4892244-4892467)
chr5 (1-224)||(25398280-25398503)
chr5 (1-224)||(33584129-33584352)
chr5 (2-224)||(8145418-8145638)
chr5 (5-224)||(12850847-12851067)
chr5 (1-224)||(2477678-2477901)
chr5 (1-208)||(11360947-11361154)
chr5 (1-224)||(37321593-37321816)
chr5 (5-224)||(3521807-3522025)
chr5 (2-224)||(6043312-6043533)
chr5 (2-224)||(14138711-14138932)
chr5 (2-224)||(3362821-3363044)
chr5 (2-224)||(38899525-38899748)
chr5 (2-224)||(22912857-22913076)
chr5 (2-187)||(4433845-4434029)
chr5 (2-224)||(12614537-12614755)
chr5 (2-198)||(31640767-31640962)
chr5 (2-224)||(17545482-17545707)
chr5 (2-212)||(27481869-27482077)
chr5 (153-224)||(12614721-12614793)
chr5 (153-224)||(22913042-22913114)
chr5 (48-118)||(36880229-36880299)
chr5 (153-217)||(8145387-8145452)
chr5 (153-224)||(2477641-2477713)
chr5 (153-224)||(6043499-6043571)
chr5 (153-224)||(11361119-11361191)
chr5 (137-192)||(13664737-13664792)
chr5 (153-198)||(31640928-31640973)
chr5 (153-224)||(3362783-3362855)
chr5 (153-224)||(4433995-4434067)
chr5 (153-224)||(4892207-4892279)
chr5 (153-224)||(25398243-25398315)
chr5 (153-224)||(38899714-38899786)
chr5 (163-217)||(10458409-10458464)
chr5 (2-36)||(13664753-13664787)
chr5 (153-198)||(17545673-17545718)
chr5 (153-224)||(12850806-12850878)
chr5 (31-67)||(13664664-13664700)
chr5 (153-224)||(33584317-33584389)
chr5 (129-189)||(36880148-36880213)
[»] chr2 (41 HSPs)
chr2 (2-224)||(9293375-9293598)
chr2 (1-224)||(33380249-33380472)
chr2 (2-224)||(23267862-23268084)
chr2 (1-224)||(35160799-35161024)
chr2 (2-224)||(7475308-7475530)
chr2 (1-224)||(10661929-10662153)
chr2 (1-224)||(3989118-3989341)
chr2 (2-224)||(31174635-31174856)
chr2 (2-224)||(13354889-13355113)
chr2 (2-224)||(43330955-43331177)
chr2 (2-198)||(21936124-21936321)
chr2 (1-220)||(9723447-9723668)
chr2 (1-224)||(21393486-21393711)
chr2 (2-189)||(14941199-14941388)
chr2 (16-198)||(16767288-16767480)
chr2 (2-118)||(27847675-27847791)
chr2 (31-224)||(40262536-40262729)
chr2 (129-224)||(22592880-22592978)
chr2 (2-116)||(22591525-22591639)
chr2 (153-224)||(14941354-14941426)
chr2 (139-190)||(34320991-34321042)
chr2 (139-208)||(37335824-37335894)
chr2 (2-75)||(37335756-37335829)
chr2 (153-224)||(9293564-9293636)
chr2 (153-217)||(31174822-31174887)
chr2 (154-199)||(37335744-37335789)
chr2 (153-224)||(10661892-10661964)
chr2 (153-224)||(21936086-21936158)
chr2 (153-224)||(23268050-23268122)
chr2 (153-224)||(35160762-35160834)
chr2 (153-224)||(43330917-43330989)
chr2 (153-217)||(27847644-27847709)
chr2 (153-224)||(9723410-9723482)
chr2 (184-220)||(39819272-39819308)
chr2 (1-36)||(9723600-9723635)
chr2 (2-37)||(22592905-22592940)
chr2 (2-36)||(9293412-9293446)
chr2 (153-217)||(13354858-13354923)
chr2 (153-224)||(7475496-7475568)
chr2 (153-224)||(21393676-21393748)
chr2 (153-224)||(33380212-33380284)
[»] scaffold0228 (6 HSPs)
scaffold0228 (2-224)||(25979-26201)
scaffold0228 (2-224)||(16027-16249)
scaffold0228 (2-160)||(8445-8603)
scaffold0228 (153-217)||(8414-8479)
scaffold0228 (153-217)||(15996-16061)
scaffold0228 (153-217)||(25948-26013)
[»] chr1 (45 HSPs)
chr1 (2-224)||(40215031-40215253)
chr1 (1-224)||(25463718-25463941)
chr1 (2-224)||(6883530-6883752)
chr1 (2-224)||(19015447-19015669)
chr1 (1-224)||(41876242-41876465)
chr1 (2-224)||(36966508-36966730)
chr1 (2-224)||(37821634-37821856)
chr1 (1-224)||(51737547-51737770)
chr1 (2-224)||(44094741-44094962)
chr1 (1-224)||(18404484-18404713)
chr1 (2-220)||(9910095-9910315)
chr1 (32-224)||(20304930-20305123)
chr1 (1-224)||(3559659-3559882)
chr1 (2-224)||(25973457-25973672)
chr1 (2-224)||(32000066-32000289)
chr1 (1-217)||(27523062-27523278)
chr1 (2-224)||(33786431-33786657)
chr1 (2-224)||(40273745-40273973)
chr1 (2-220)||(44690825-44691051)
chr1 (153-220)||(19722903-19722970)
chr1 (2-76)||(16045746-16045820)
chr1 (153-224)||(33786623-33786694)
chr1 (1-217)||(10167442-10167658)
chr1 (16-75)||(34519815-34519874)
chr1 (153-224)||(16045786-16045858)
chr1 (153-224)||(40214993-40215065)
chr1 (153-224)||(40273707-40273779)
chr1 (157-224)||(52064377-52064445)
chr1 (35-192)||(52329345-52329508)
chr1 (153-217)||(44691017-44691082)
chr1 (153-224)||(25463681-25463753)
chr1 (153-224)||(44094703-44094775)
chr1 (129-224)||(22157338-22157433)
chr1 (31-118)||(51621002-51621085)
chr1 (153-224)||(6883492-6883564)
chr1 (153-224)||(9910281-9910353)
chr1 (153-224)||(19015409-19015481)
chr1 (153-224)||(32000255-32000327)
chr1 (153-224)||(36966696-36966768)
chr1 (153-224)||(37821822-37821894)
chr1 (54-107)||(28391455-28391508)
chr1 (2-35)||(44690859-44690892)
chr1 (153-224)||(3559622-3559694)
chr1 (153-224)||(18404447-18404519)
chr1 (30-66)||(22159231-22159267)
[»] chr3 (51 HSPs)
chr3 (1-224)||(33145754-33145977)
chr3 (2-224)||(3137214-3137436)
chr3 (1-224)||(3574326-3574550)
chr3 (5-224)||(22426145-22426363)
chr3 (1-224)||(3456106-3456329)
chr3 (2-224)||(33113836-33114059)
chr3 (1-224)||(3089459-3089684)
chr3 (2-224)||(6041927-6042142)
chr3 (1-224)||(37216853-37217076)
chr3 (1-224)||(37522095-37522318)
chr3 (1-224)||(19650700-19650923)
chr3 (1-224)||(2754759-2754984)
chr3 (1-224)||(36864832-36865050)
chr3 (1-224)||(8320382-8320607)
chr3 (1-224)||(48160947-48161171)
chr3 (2-220)||(47738148-47738373)
chr3 (2-234)||(9796819-9797051)
chr3 (1-217)||(33839573-33839794)
chr3 (5-189)||(42297909-42298092)
chr3 (2-224)||(34482688-34482932)
chr3 (31-224)||(40327897-40328097)
chr3 (2-224)||(8361839-8362067)
chr3 (5-118)||(30385057-30385170)
chr3 (2-214)||(41883031-41883245)
chr3 (15-220)||(24343603-24343811)
chr3 (85-224)||(30385527-30385665)
chr3 (1-118)||(42297395-42297513)
chr3 (2-224)||(41224276-41224499)
chr3 (1-118)||(11347310-11347427)
chr3 (129-220)||(26612916-26613008)
chr3 (129-224)||(42921295-42921391)
chr3 (5-220)||(46918948-46919156)
chr3 (1-83)||(42921185-42921267)
chr3 (153-224)||(3137402-3137474)
chr3 (153-224)||(3574515-3574587)
chr3 (153-224)||(6041889-6041961)
chr3 (153-224)||(33145718-33145789)
chr3 (153-198)||(8362033-8362078)
chr3 (153-217)||(9797017-9797082)
chr3 (153-224)||(2754722-2754794)
chr3 (153-224)||(11347273-11347345)
chr3 (153-224)||(37217041-37217113)
chr3 (2-36)||(8361876-8361910)
chr3 (2-36)||(33145906-33145940)
chr3 (2-36)||(36864870-36864904)
chr3 (2-36)||(40328025-40328059)
chr3 (153-198)||(41883211-41883256)
chr3 (153-217)||(47738117-47738182)
chr3 (153-224)||(24343552-24343624)
chr3 (153-216)||(30385024-30385088)
chr3 (153-224)||(34482898-34482970)
[»] scaffold0178 (2 HSPs)
scaffold0178 (2-220)||(11664-11882)
scaffold0178 (153-224)||(11626-11698)
[»] scaffold0085 (2 HSPs)
scaffold0085 (2-224)||(47893-48114)
scaffold0085 (153-216)||(47863-47927)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-224)||(4438-4661)
scaffold0204 (153-224)||(4401-4473)
[»] scaffold0096 (2 HSPs)
scaffold0096 (2-224)||(41054-41275)
scaffold0096 (153-224)||(41016-41088)
[»] scaffold0471 (2 HSPs)
scaffold0471 (2-224)||(12885-13107)
scaffold0471 (153-224)||(12847-12919)
[»] scaffold0665 (2 HSPs)
scaffold0665 (1-83)||(3110-3192)
scaffold0665 (153-224)||(3073-3145)
[»] scaffold0041 (2 HSPs)
scaffold0041 (2-101)||(85469-85568)
scaffold0041 (161-224)||(85575-85637)


Alignment Details
Target: chr8 (Bit Score: 161; Significance: 1e-85; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 20091823 - 20091601
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  20091823 aagaatgacatggcagaataatcacccttagattttatcaagaaatcgtcctgaaattaatgttagccaataaaatctcagcctagccggaaatcatggg 20091724  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20091723 gtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttata 20091624  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  20091623 aaatcattcttgatatctagcat 20091601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 34665425 - 34665646
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||     
T  34665425 aagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcttggccgaaaatcatgga 34665524  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34665525 gtggtgggtgttatgta-tttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttata 34665623  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  34665624 aaatcattcttgatatctagcat 34665646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 17841872 - 17841650
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  17841872 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 17841773  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  17841772 gtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttata 17841673  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  17841672 aaatcattcttgatatctagcat 17841650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 6108256 - 6108033
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  6108256 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 6108157  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||||||| ||||||||    
T  6108156 ggtggtgggtgttatgtatcttctttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttat 6108057  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  6108056 aaaatcattcttgatatctagcat 6108033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 40780151 - 40779929
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  40780151 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 40780052  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     |||||  |||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  40780051 gtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttata 40779952  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  40779951 aaatcattcttgatatctagcat 40779929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 26042138 - 26041913
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagatttt---atcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcat 98  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||||| |||||||||||||||| || |||||||||||    
T  26042138 aagaatgacatgacagaataatcacccttagatttttttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctgaccggaaatcat 26042039  T
Q  99 gggatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
    ||| ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||    
T  26042038 ggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 26041939  T
Q  199 ataaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||||    
T  26041938 ataaaatcattcttgatatctagcat 26041913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 37986078 - 37985856
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||  ||||||||||||||||    
T  37986078 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgctagccaataaaatctcagtctggccggaaatcatgg 37985979  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| |||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  37985978 ggtggtgggtgttatgta-tttttttttatgaaagattaataaatgggactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttat 37985880  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  37985879 aaaatcattcttgatatctagcat 37985856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 42755064 - 42754842
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||| ||||||||||    
T  42755064 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcatgaaattaatgttaaccaataaaatctcagcctggccgaaaatcatggg 42754965  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
    |||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||| ||||||||||||| ||| |||||||||    
T  42754964 atggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttcttata 42754865  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  42754864 aaatcattcttgatatctagcat 42754842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 3597063 - 3596841
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| || ||||||||||||||    
T  3597063 aagaatgacatggcagaataattacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctgaccggaaatcatggg 3596964  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  |||||||||||||||| |||||||| ||| |||||||||    
T  3596963 gtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttata 3596864  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  3596863 aaatcattcttgatatctagcat 3596841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 25581261 - 25581039
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| || |||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| || ||||||||||||||    
T  25581261 aagaatgacatggcaaaataatcacctttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctgaccggaaatcatggg 25581162  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||| |||||||||    
T  25581161 gtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttata 25581062  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  25581061 aaatcattcttgatatctagcat 25581039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 1645988 - 1645764
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||||||||| ||| ||||||||||||    
T  1645988 taagaaagacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagctaataaaatctcagcctggtcggaaatcatgg 1645889  T
Q  101 gatggtgagtgttatgta-nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctta 199  Q
    | ||||| ||||||||||           ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||  |||||||||    
T  1645888 ggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttctta 1645789  T
Q  200 taaaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||||    
T  1645788 taaaatcattcttgatatctagcat 1645764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 14128906 - 14129124
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||     || ||||||| |    
T  14128906 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagc-----cgaaaatcatag 14129000  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  14129001 ggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttcttat 14129100  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  14129101 aaaatcattcttgatatctagcat 14129124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 32064788 - 32065011
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  32064788 aagaatgacatggcagaataatcacccttagattttatcaagaaataattctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 32064887  T
Q  102 atggtgagtgttatgta-nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
     || || ||||||||||           ||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||| ||| ||||||||    
T  32064888 ctgatgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttcttat 32064987  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  32064988 aaaatcattcttgatatctagcat 32065011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 35353083 - 35353299
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||||||||| |||||||||||||||     
T  35353083 taagaatgacatggcagaataatcacccttagattttatcaagaaataatcatgaaattaatgttaaccaataaaatctcagcctggccggaaatcatga 35353182  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||| | |||| |||  ||||||||||||||||||||||||||||| ||||||||    
T  35353183 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttat 35353282  T
Q  201 aaaatcattcttgatat 217  Q
    |||||||||||||||||    
T  35353283 aaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 15187603 - 15187825
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctc-agcttggccggaaatcatgg 100  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  15187603 aagaatgatatggcagaataattacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctctagcctggccggaaatcatgg 15187702  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
      ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||| |||||||||||| |||||||||||    
T  15187703 agtggtgggtgttatgtattttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttat 15187801  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  15187802 aaaatcattcttgatatctagcat 15187825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 218
Target Start/End: Complemental strand, 39772823 - 39772608
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||||||   |||||||||||||||    
T  39772823 aagaatgacatggcagaataatcacccttagattttatcaaaaaatagtcttgaaattaatgttagccaataaaatctcagc-cagccggaaatcatggg 39772725  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
    |||||| ||||||||||          ||||||| |||||||| || ||||||||||||  |||||||||||| ||||||||||||| ||||||||||||    
T  39772724 atggtgggtgttatgtattttttttttatgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttata 39772625  T
Q  202 aaatcattcttgatatc 218  Q
    |||||||||||||||||    
T  39772624 aaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 8453877 - 8454078
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |  ||||||||||||||| ||||||||||| ||||     
T  8453877 aagaatgacatgacaaaataatcacccttagattttatcaagaaatagtcctgaaattaatgtaacacaataaaatctcagcctggccggaaattatggt 8453976  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||  ||||||||    
T  8453977 gtggtgggtgttatgta-tctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaattcttcttata 8454075  T
Q  202 aaa 204  Q
    |||    
T  8454076 aaa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 41819801 - 41819594
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||    
T  41819801 taagaatgatatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcccggccggaaatcatgg 41819702  T
Q  101 gatggtgagtgttatgta----------nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaa 190  Q
    | ||||| ||||||||||                    |||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  41819701 ggtggtgtgtgttatgtattttttttttttttttttttatgataggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaa 41819602  T
Q  191 tctttctt 198  Q
    ||||||||    
T  41819601 tctttctt 41819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 31347804 - 31347576
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |   |||| |||||||||||    
T  31347804 aagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctctgtcgggccagaaatcatggg 31347705  T
Q  102 atggtgagtgttatgta---nnnnnnnnnnatgaaagg-ttaa--taaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatcttt 195  Q
     | ||| ||||||||||             ||||||||  |||  ||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  31347704 gtagtgggtgttatgtatttttttttttttatgaaaggaataaattaaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttt 31347605  T
Q  196 cttataaaatcattcttgatatctagcat 224  Q
    |||   |||||||||||||||||||||||    
T  31347604 cttgataaatcattcttgatatctagcat 31347576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 32393900 - 32394114
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||||||  | |||| |||||||||    
T  32393900 taagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagtctagccgaaaatcatgg 32393999  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||  ||||||||||          ||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||| ||| ||| ||||    
T  32394000 ggtggtaggtgttatgta-tttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtg-catgtcattcttaaatattttttat 32394097  T
Q  201 aaaatcattcttgatat 217  Q
    |||||||||||||||||    
T  32394098 aaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 6 - 224
Target Start/End: Original strand, 10044390 - 10044613
Alignment:
Q  6 atgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatgg 105  Q
    |||||||||||||||||||| ||||| ||||||||||||||| ||  || ||||||||||| ||||||||||||||   ||| ||||||||||||  |||    
T  10044390 atgacatgacagaataatcatccttaaattttatcaagaaatagttttggaattaatgttagccaataaaatctcaatctggtcggaaatcatggagtgg 10044489  T
Q  106 tgagtgttatgtannnnnnnnnn-----atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    ||  |||||||||               ||||||| ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  10044490 tggttgttatgtatttttttttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttat 10044589  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  10044590 aaaatcattcttgatatctagcat 10044613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 57 - 224
Target Start/End: Original strand, 30055615 - 30055781
Alignment:
Q  57 attaatgttatccaataaaatctcagcttggccggaaatcatgggatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaat 156  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| |||||  |||||||||          ||||||||||||||||||||||| ||||    
T  30055615 attaatgttagccaataaaatctcagct-ggccggaaatcatggggtggtggatgttatgtattttttttttatgaaaggttaataaatgagactaaaat 30055713  T
Q  157 ctaagagtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30055714 ctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcat 30055781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 24844880 - 24844664
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| | ||   ||||||||| ||    
T  24844880 aagaatgacatgaca-aataatcacccttagattttatcaagaaattgtcccgaaattaatgttagccaataaaatctcatcctgattggaaatcatagg 24844782  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-at 200  Q
     ||||| ||||||||||          ||||||||||||||| | ||| | ||||||||||||||||||| ||||||| ||||||| |||||||||| ||    
T  24844781 gtggtgggtgttatgta--ttttttttatgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaatctttcttgat 24844684  T
Q  201 aaaatcattcttgatatcta 220  Q
    ||||||||| ||||||||||    
T  24844683 aaaatcattattgatatcta 24844664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 3890638 - 3890414
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||  ||||||||||||| |||||||||||||| | |||| | ||||||||||    
T  3890638 aagaatgacatggcagaataatcacc-ttagattttatcaagaaattgtctcgaaattaatgttagccaataaaatctcatcatggctgaaaatcatggg 3890540  T
Q  102 atggtgagtgttatgtannnnnnnnnnatga--aaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt- 198  Q
     ||||| ||||||||||          |  |  ||||||||||||| ||| | ||||||||  ||||||||| |||||| |||||||||||||||||||     
T  3890539 gtggtgggtgttatgtattttttttataaaattaaggttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttg 3890440  T
Q  199 ataaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||||    
T  3890439 ataaaatcattcttgatatctagcat 3890414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 7022021 - 7022244
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||  |   ||||||||||||||||    
T  7022021 aagaatgatatggcagaataatcacccttagattttatcaagaaattgtaccgaaattaatgttagccaataaaatctatgtcgggccggaaatcatggg 7022120  T
Q  102 atggtgagtgttatgta---nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
     ||||| ||||||||||             ||||||||  ||||||||||||||||||||||| | |||||||||| | |||||||||||||||||||||    
T  7022121 gtggtgggtgttatgtatttttttttttttatgaaagg--aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttctt 7022218  T
Q  199 ataaaatcattcttgatatctagcat 224  Q
       |||||||| ||||||||||||||    
T  7022219 gataaatcattgttgatatctagcat 7022244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 24211575 - 24211459
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    ||||||| |||| ||||||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  24211575 aagaatggcatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 24211476  T
Q  102 atggtgagtgttatgta 118  Q
     ||||| ||||||||||    
T  24211475 gtggtgggtgttatgta 24211459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 24211267 - 24211172
Alignment:
Q  129 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcat 24211172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 30835069 - 30834859
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||        ||||||||||||    
T  30835069 aagaatgacatggcagaataatcaccctttgattttatcaagaaattgtcctgaaattaatgttagtcaataaaatctca--------ggaaatcatggg 30834978  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-at 200  Q
     ||||| ||||||||||          || ||| ||| | |||| | ||||||||||||| ||| ||||| || |||||||||||| |||||||||| ||    
T  30834977 gtggtgggtgttatgta-ttttattttatcaaaagttgaaaaataacactgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgat 30834879  T
Q  201 aaaatcattcttgatatcta 220  Q
    ||||||||||||||||||||    
T  30834878 aaaatcattcttgatatcta 30834859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 2 - 189
Target Start/End: Complemental strand, 27835475 - 27835288
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    ||||||||||||  | |||||||| ||||||||||||| || |||||||| | |||||||||||| |||||||||||||||| | | |||||||||||||    
T  27835475 aagaatgacatggtaaaataatcatccttagattttattaaaaaattgtcttcaaattaatgttagccaataaaatctcagcctagacggaaatcatggg 27835376  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttga 189  Q
    |||||| ||||||||||          || |||||||||||||||||| |||||||||||  ||||||||||| ||| ||||| ||||    
T  27835375 atggtgggtgttatgtatttttgttttataaaaggttaataaatgagattgaaatctaaggatgattattgtgtcatatcatttttga 27835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 1503730 - 1503643
Alignment:
Q  137 ttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1503730 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcat 1503643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 72 - 224
Target Start/End: Original strand, 38017047 - 38017198
Alignment:
Q  72 taaaatctcagcttggccggaaatcatgggatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtga-ttat 170  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||||||           |||||| ||||||||||||||||||||||||  || | ||||    
T  38017047 taaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttt--tgaaagattaataaatgagactgaaatctaaaggtaaattat 38017144  T
Q  171 tgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38017145 tgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 38017198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 27782136 - 27782027
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatg 104  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||  |||||||||||||| || ||    
T  27782136 aatgacatggcagaataatcacccttagattttatcaagaaattgtcttgaaattaatgttagccaataaaatcttagtctggccggaaatcattgggtg 27782037  T
Q  105 gtgagtgtta 114  Q
    ||| ||||||    
T  27782036 gtgggtgtta 27782027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 7017887 - 7017771
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||| ||||||||||||| |   ||||||||||||||||    
T  7017887 aagaatgacatggcagaataatcatccttagattttatcaagaaattgtactaaaattaatgttagccaataaaatctctgtcgggccggaaatcatggg 7017788  T
Q  102 atggtgagtgttatgta 118  Q
     ||||| ||||||||||    
T  7017787 gtggtgggtgttatgta 7017771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 130 - 224
Target Start/End: Complemental strand, 37132575 - 37132480
Alignment:
Q  130 tgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcat 37132480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 15972899 - 15972822
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatct 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  15972899 aagaatgacatgacagaataatcacccttagattttatcaagaaattgttctgaatttaatgttagccaataaaatct 15972822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 7017743 - 7017658
Alignment:
Q  139 aataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||  |||||||| |   ||||||||||| ||| ||||||   |||||||||||||||||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctagcat 7017658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 27782105 - 27782177
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||| |||||||  |||||||||| ||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcat 27782177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 32064822 - 32064750
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 32064750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 34665459 - 34665387
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 34665387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 217  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 17841838 - 17841910
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| ||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcat 17841910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 20091789 - 20091861
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||  |||||||||| ||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcat 20091861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 31347770 - 31347842
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||| | |||||  |||||||||| ||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcat 31347842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 40780117 - 40780189
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| ||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcat 40780189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 1886621 - 1886672
Alignment:
Q  167 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 217  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  1886621 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 3817952 - 3817914
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatc 40  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  3817952 aagaattacatgacagaataatcacccttagattttatc 3817914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 7022055 - 7021990
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 217  Q
    ||||||||| ||||||||| |||||| |||||||||||| |||||| | |||||| ||||||||||    
T  7022055 aaatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatat 7021990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 7017853 - 7017925
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||||||||  |||||||| ||||||||||||||||||| |||||| | |||||| ||| |||||| ||||||    
T  7017853 aaatctaaggatgattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcat 7017925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 8453911 - 8453839
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| || |||||||||||||||  |||||| | |||||| |||||||||| ||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcat 8453839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 14128941 - 14128869
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  ||| || |||||||| |||||||||| ||||||    
T  14128941 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcat 14128869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 15187637 - 15187565
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| || |||||| |||||| |||||||||||  |||||| |||||||| |||||||||| ||||||    
T  15187637 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcat 15187565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 24844847 - 24844918
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||| |||||||  |||||||||| ||||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcat 24844918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 26042104 - 26042176
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| || |||||||||||||||  |||||| |||||||| ||||| |||| ||||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcat 26042176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 30055744 - 30055708
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagatttta 38  Q
    ||||||||||||||| |||||||||||||||||||||    
T  30055744 aagaatgacatgacacaataatcacccttagatttta 30055708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 30835035 - 30835099
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatat 217  Q
    ||||| ||| ||||||||| ||||||||||||||||||| |||   |||||||| ||||||||||    
T  30835035 aaatcaaagggtgattattctgccatgtcattcttgaattttttcgataaaatctttcttgatat 30835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 32393935 - 32393863
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||| |||| ||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||    
T  32393935 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 32393863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 35353118 - 35353046
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  |||||| | |||||| |||||||||| ||||||    
T  35353118 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcat 35353046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 37986043 - 37986115
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattctt-gaatctttcttataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| |||||||||||||||  ||| ||| | |||||||| |||||||||| ||||||    
T  37986043 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcat 37986115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 38017047 - 38016983
Alignment:
Q  154 aatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 217  Q
    |||| ||| ||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  38017047 aatccaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 30834893 - 30834927
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattt 36  Q
    ||||||||||||||||||||| |||||||||||||    
T  30834893 aagaatgacatgacagaataaccacccttagattt 30834927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 41819605 - 41819639
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattt 36  Q
    ||||||||||||||| |||||||||||||||||||    
T  41819605 aagaatgacatgacacaataatcacccttagattt 41819639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 3597029 - 3597074
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
    ||||||||| || |||||| |||||||||||||||||| |||||||    
T  3597029 aaatctaagggtaattattctgccatgtcattcttgaaactttctt 3597074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 3890605 - 3890649
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  3890605 aaatctaag-gtgattattctgccatgtcattcttgaatttttctt 3890649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 6108221 - 6108286
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 217  Q
    ||||||||| ||||||||| ||||||||||||||| ||  |||||| | |||||| ||||||||||    
T  6108221 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatat 6108286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 15972865 - 15972910
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
    ||||||||| ||||||||| || |||||||||||| ||||||||||    
T  15972865 aaatctaagggtgattattctgtcatgtcattcttcaatctttctt 15972910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 39772789 - 39772826
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaa 190  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  39772789 aaatctaagggtgattattctgccatgtcattcttgaa 39772826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 25581227 - 25581299
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||  ||||||||| ||||||||||||||||||  ||||||  ||||| | |||||||||| ||||||    
T  25581227 aaatctaaaggtgattattttgccatgtcattcttgaaattttcttcgtaaaaactttcttgatatatagcat 25581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 27835441 - 27835513
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||||||||  |||||||| | ||||||||||||||||| |||||| |||| ||| || ||||||| ||||||    
T  27835441 aaatctaaggatgattattttaccatgtcattcttgaatttttcttaataagatctttattgatatatagcat 27835513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 37132520 - 37132552
Alignment:
Q  4 gaatgacatgacagaataatcacccttagattt 36  Q
    ||||||||||||| |||||||||||||||||||    
T  37132520 gaatgacatgacacaataatcacccttagattt 37132552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 161; Significance: 1e-85; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 17705488 - 17705269
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  17705488 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagtctggccggaaatcatgg 17705389  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    ||||||| ||||||||||          ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  17705388 gatggtgggtgttatgta---attttttatgaaaggttaataaatgagactgaaatctaag-gtgattattgtgtcatgtcattcttgaatctttcttat 17705293  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  17705292 aaaatcattcttgatatctagcat 17705269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 2309446 - 2309223
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2309446 taagaatggcatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcttggccggaaatcatgg 2309347  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | | ||| ||||||||||          ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2309346 ggttgtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttat 2309247  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||  ||||||||||||||    
T  2309246 aaaatcatcgttgatatctagcat 2309223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 28675191 - 28675413
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||    
T  28675191 aagaatgacatgtcggaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagctaataaaatctcagcctggccggaaatcatggg 28675290  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| | ||||||||          ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  28675291 gtggtgggggttatgtattttttatttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttata 28675390  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  28675391 aaatcattcttgatatctagcat 28675413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 17176043 - 17175821
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  17176043 aagaatgacatgacagaataatcacccttagattttatcaagaaataatcatgaaattaatgttagccaataaaatctcagcctggccggaaatcatggg 17175944  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||    
T  17175943 gtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttata 17175844  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  17175843 aaatcattcttgatatctagcat 17175821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 33696739 - 33696962
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  33696739 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctggccggaaatcatggg 33696838  T
Q  102 atggtgagtgttatgt-annnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
     ||||| ||||||||| |          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||    
T  33696839 gtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttcttat 33696938  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  33696939 aaaatcattcttgatatctagcat 33696962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 33695349 - 33695126
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  33695349 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctggccggaaatcatggg 33695250  T
Q  102 atggtgagtgttatgt-annnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
     ||||| ||||||||| |          ||||||| ||||||||||||||||||||||||  |||||||||||| ||| |||||||| ||| ||||||||    
T  33695249 gtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatatcattcttaaatatttcttat 33695150  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  33695149 aaaatcattcttgatatctagcat 33695126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 18365595 - 18365374
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||||| | |||||||||||||||||    
T  18365595 aagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcatcctggccggaaatcatggg 18365496  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     | ||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||| |||||||||||| ||||||||||||    
T  18365495 gtagtgggtgttatgta-tttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttata 18365397  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  18365396 aaatcattcttgatatctagcat 18365374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 18370859 - 18370638
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||||| | |||||||||||||||||    
T  18370859 aagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcatcctggccggaaatcatggg 18370760  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     | ||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||| |||||||||||| ||||||||||||    
T  18370759 gtagtgggtgttatgta-tttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttata 18370661  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  18370660 aaatcattcttgatatctagcat 18370638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 6031764 - 6031546
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||| ||||||||||| |||| ||||||||||||||||    
T  6031764 taagaatgacatgacagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttaaccaataaaatcccagcctggccggaaatcatgg 6031665  T
Q  101 gatggtgagtgttatgta-nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctta 199  Q
    | ||||| ||||||||||           || |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||| |||    
T  6031664 ggtggtgggtgttatgtatttttttttttataaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttttta 6031565  T
Q  200 taaaatcattcttgatatc 218  Q
    |||||||||||||||||||    
T  6031564 taaaatcattcttgatatc 6031546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 23291107 - 23290881
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  23291107 taagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcagcctggccagaaatcatgg 23291008  T
Q  101 gatggtgagtgttatgta---nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttct 197  Q
    | || || ||||||||||             ||||||| ||||||||||||||||||||||||  || ||||||||||||| ||||||||||||||||||    
T  23291007 ggtgatgggtgttatgtattttcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttct 23290908  T
Q  198 tataaaatcattcttgatatctagcat 224  Q
    |||||||||||| ||||||||||||||    
T  23290907 tataaaatcatttttgatatctagcat 23290881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 32702248 - 32702470
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| ||  | |||||||||||||||    
T  32702248 aagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatattaaccaataaaatctgagtctagccggaaatcatggg 32702347  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| || |||||||          ||||||| ||||||||||||||||||||||||  || ||||||||| |||||||||||||||| |||||||||    
T  32702348 gtggtgggtcttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttcttata 32702447  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  32702448 aaatcattcttgatatctagcat 32702470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 11548610 - 11548389
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||| |   ||||||||||||||||    
T  11548610 aagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgatattaatgttagccaataaaatctctgtcgggccggaaatcatggg 11548511  T
Q  102 atggtgagtgttatgta--nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctta 199  Q
     | ||| ||||||||||            ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||     
T  11548510 gt-gtgggtgttatgtatttttcttttttatgaaagg--aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttg 11548414  T
Q  200 taaaatcattcttgatatctagcat 224  Q
      |||||||||||||||||||||||    
T  11548413 ataaatcattcttgatatctagcat 11548389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 6127317 - 6127506
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctg-aaattaatgttatccaataaaatctcagcttggccggaaatcatg 99  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||| || |||||||||||| |||||||||| |||| |||||| |||||||||    
T  6127317 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaaattaatgttagccaataaaatatcagtttggccagaaatcatg 6127416  T
Q  100 ggatggtgagtgttatgta-nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttg 188  Q
    || ||||| ||||||||||           ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6127417 gggtggtgggtgttatgtatttttttttatatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 9752267 - 9752110
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  9752267 aagaatgatatggcagaataatcacccttagattttattaagaaattgtcctgaaattaatgttagccaataaaatctcagcctggccggaaatcatggg 9752168  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaa 160  Q
     || || ||||||||||          ||||||||||||||||||||||||||||||||    
T  9752167 gtgatgggtgttatgta-tttttttttatgaaaggttaataaatgagactgaaatctaa 9752110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 8515748 - 8515556
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||  || ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||  ||||||||||||    
T  8515748 taagaatgacatggcagaataatcacattt-gattttatcaagaaattgtcccgaaattaatgttagccaataaaatctcagcctgatcggaaatcatgg 8515650  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatcttt 195  Q
    | |||||  |||||||||          |||||| |||||||||| ||||||||||||||||||||||||| | |||||||||| || |||||||    
T  8515649 ggtggtggatgttatgta-tttttttttatgaaatgttaataaataagactgaaatctaagagtgattattctaccatgtcatttttaaatcttt 8515556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 25986973 - 25987089
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| || ||||||||| |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  25986973 aagaatgacatggcaaaataatcactcttaaattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatggg 25987072  T
Q  102 atggtgagtgttatgta 118  Q
     ||||| ||||||||||    
T  25987073 gtggtgggtgttatgta 25987089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 29693615 - 29693711
Alignment:
Q  129 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||||||| |||||||| ||||||||||||||| || |||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcat 29693711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 70 - 198
Target Start/End: Complemental strand, 18889597 - 18889470
Alignment:
Q  70 aataaaatctcagcttggccggaaatcatgggatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgatta 169  Q
    |||||||||||||| | ||||||||||||||| ||||| || |||||||          ||||||| ||||||||||||||||||||||||  |||||||    
T  18889597 aataaaatctcagccttgccggaaatcatggggtggtgggttttatgtattttttttt-atgaaagattaataaatgagactgaaatctaaaggtgatta 18889499  T
Q  170 ttgtgccatgtcattcttgaatctttctt 198  Q
    ||||||||||||||||||||||| |||||    
T  18889498 ttgtgccatgtcattcttgaatcattctt 18889470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 343 - 445
Target Start/End: Original strand, 6434795 - 6434897
Alignment:
Q  343 gtgcaaaatgttaagtattatgtgattgatcatttattttaatttcatgtcggcatttgaatgctgcatgaaaagaagagggggctaataatgcacaaga 442  Q
    ||||| |||||||||| |||||||||| ||||| |||||| ||||||||| | |||||||||| |||||||||||||||  ||| ||| ||||||||| |    
T  6434795 gtgcagaatgttaagtgttatgtgattaatcatatattttcatttcatgtagtcatttgaatggtgcatgaaaagaagaaaggggtaacaatgcacaaca 6434894  T
Q  443 ctc 445  Q
    |||    
T  6434895 ctc 6434897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 34238948 - 34238887
Alignment:
Q  163 gtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    |||||||||||| |||||||||||||||||||  | ||||||||||||||||||||||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctagcat 34238887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 25987007 - 25986935
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||| |||||||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  25987007 aaatttaagagtgattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcat 25986935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 33695315 - 33695387
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 33695387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 33696773 - 33696701
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 33696701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 6127352 - 6127280
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 6127280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 23291072 - 23291144
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 23291144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 11548576 - 11548647
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagca 223  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||| | |||||  |||||||||| |||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatatagca 11548647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 29693542 - 29693597
Alignment:
Q  63 gttatccaataaaatctcagcttggccggaaatcatgggatggtgagtgttatgta 118  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||  |||||||||    
T  29693542 gttagccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgta 29693597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 8515723 - 8515785
Alignment:
Q  163 gtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||||||||| ||||| |||| |||||||| |||||||||| ||||||    
T  8515723 gtgattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcat 8515785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 17176009 - 17176081
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| || |||||||||||||||  ||| || |||||||| |||||||||| ||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcat 17176081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 17705453 - 17705525
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| || |||||||||||| ||  |||||| |||||||| |||||||||| ||||||    
T  17705453 aaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 17705525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 18365561 - 18365633
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttg-aatctttcttataaaatcattcttgatatctagcat 224  Q
    |||| |||| ||||||||| |||||||||||||||| ||| ||| | |||||||| |||||||||| ||||||    
T  18365561 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcat 18365633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 18370825 - 18370897
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttg-aatctttcttataaaatcattcttgatatctagcat 224  Q
    |||| |||| ||||||||| |||||||||||||||| ||| ||| | |||||||| |||||||||| ||||||    
T  18370825 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcat 18370897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 28675225 - 28675153
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| |||||||||  | |||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 28675153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 582602 - 582531
Alignment:
Q  151 tgaaatctaagagtgattattgtgcc-atgtcattcttgaatctttctta-taaaatcattcttgatatcta 220  Q
    ||||||||||  ||||||||| |||| || |||||||| ||| ||||||| |||||||||||||||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatcta 582531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 18889685 - 18889756
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    ||||||||| || |||||| ||||||||||||||||||  ||||||   ||||| |||||||||| ||||||    
T  18889685 aaatctaagggttattattctgccatgtcattcttgaaattttcttgataaatctttcttgatatatagcat 18889756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 2121059 - 2121013
Alignment:
Q  175 ccatgtcattcttgaatc-tttcttataaaatcattcttgatatcta 220  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||||    
T  2121059 ccatgtcattcttgaatctttttttataaaatcatttttgatatcta 2121013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 28675376 - 28675342
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattt 36  Q
    ||||||||||||||| |||||||||||||||||||    
T  28675376 aagaatgacatgacacaataatcacccttagattt 28675342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 9752233 - 9752278
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
    ||||||||| ||||||||| |||||| |||||||||||| ||||||    
T  9752233 aaatctaagggtgattattctgccatatcattcttgaatttttctt 9752278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 18889719 - 18889683
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagatttta 38  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  18889719 aagaatgacatggcagaataataacccttagatttta 18889683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 157; Significance: 3e-83; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 4974757 - 4974535
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||| |    
T  4974757 aagaatgacatggcagaataatcacccttagattttatcaagaaattatcctgaaattaatgttagccaataaaatctcagtttggccggaaatcatgag 4974658  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  4974657 gtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttttttata 4974558  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  4974557 aaatcattcttgatatctagcat 4974535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 48880949 - 48880727
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  48880949 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 48880850  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||| ||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  48880849 gtggtgggtgttatgtatcttttttttatgaaagattaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaatttttcttata 48880750  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  48880749 aaatcattcttgatatctagcat 48880727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 3962021 - 3962243
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  3962021 taagaatgacatgacagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcttggccggaaatcatgg 3962120  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||| || ||||||||    
T  3962121 ggtggtgggtgttatgta-tttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatatttcttat 3962219  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  3962220 aaaatcattcttgatatctagcat 3962243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 30848611 - 30848834
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  30848611 taagaatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatgg 30848710  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    ||| ||| ||||||||||          ||||||| |||||||||||||||||||| |||  ||||||||||||||||||||||||||||| ||||||||    
T  30848711 gatagtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttat 30848810  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    |||| |||||||||||||||||||    
T  30848811 aaaagcattcttgatatctagcat 30848834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 45637755 - 45637976
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||  |||||||||||||||||    
T  45637755 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgctagccaataaaatctcagtctggccggaaatcatggg 45637854  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     |||||  |||||||||          ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  45637855 gtggtggatgttatgta-tttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttata 45637953  T
Q  202 aaatcattcttgatatctagcat 224  Q
    ||||||||||| |||||||||||    
T  45637954 aaatcattcttaatatctagcat 45637976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 15329316 - 15329539
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||||||||||||  |||||||||||||||||    
T  15329316 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagtcaataaaatctcagactggccggaaatcatggg 15329415  T
Q  102 atggtgagtgtta-tgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
     |||||||||||| | |           ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  15329416 gtggtgagtgttattttttttattttttatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttcttat 15329515  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    |||||||||||| |||||||||||    
T  15329516 aaaatcattctttatatctagcat 15329539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 34482877 - 34483099
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  34482877 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagtctggccggaaatcatgg 34482976  T
Q  101 gatggtgagtgttatgta----nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttc 196  Q
    | ||||| ||||||||||              ||||||| ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||    
T  34482977 g-tggtgggtgttatgtattttttttatttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttc 34483075  T
Q  197 ttataaaatcattcttgatatcta 220  Q
    ||||||||||||||||||||||||    
T  34483076 ttataaaatcattcttgatatcta 34483099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 42611854 - 42612076
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||| ||||  || ||||||||||||||    
T  42611854 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatttcagtctgaccggaaatcatggg 42611953  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||| ||||||||||||||  |||||||||||||||||||||||||  ||||||||||||    
T  42611954 gtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttata 42612053  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  42612054 aaatcattcttgatatctagcat 42612076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 24395014 - 24395236
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||  ||| |||||||||||||| |||| || ||||||||||||||| |||||||||||||| | ||||||||||||||||    
T  24395014 taagaatgacatggcagaataacaacctttagattttatcaaaaaatagttctgaaattaatgttagccaataaaatctcaacctggccggaaatcatgg 24395113  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||    
T  24395114 ggtggtgggtgttatgtatttattttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttat 24395212  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  24395213 aaaatcattcttgatatctagcat 24395236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 25167873 - 25167656
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||| || ||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  25167873 taagaatgacatggcagaataatcatccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatgg 25167774  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | || || ||||||||||          ||||||| ||      ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  25167773 ggtgatgggtgttatgtatcttttttttatgaaagatt------tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttat 25167680  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  25167679 aaaatcattcttgatatctagcat 25167656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 42696125 - 42696345
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||||||| ||    
T  42696125 taagaatgacatagcagaataatcacccttatattttatcaagaaattgtcctgaaattaatgttagtcaataaaatctcaacctggccggaaatcaagg 42696224  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-a 199  Q
    | |||||  |||||||||          |||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| || |    
T  42696225 ggtggtggatgttatgtattttttttttatgaaaagttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttga 42696324  T
Q  200 taaaatcattcttgatatcta 220  Q
    |||||||||| ||||||||||    
T  42696325 taaaatcattattgatatcta 42696345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 15577872 - 15577647
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||  ||| |||||||||||||| |||||| ||||||||  |||||||||||||||||    
T  15577872 aagaatgacatggcagaataatcacccttagactttatcaagaaaaagtcttgaaattaatgttagccaatataatctcagtctggccggaaatcatggg 15577773  T
Q  102 atggtgagtgttatgtannnnnnnnnn---atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
     ||||| ||||||||||             || |||| ||||||||||||||||||||||||  |||||||||||| ||||||||||||| |||||||||    
T  15577772 ttggtgggtgttatgtatttttttttttttataaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttctt 15577673  T
Q  199 ataaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||||    
T  15577672 ataaaatcattcttgatatctagcat 15577647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 20010119 - 20009902
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||||    
T  20010119 aagaatgacat-acagaataatcacccttagattttatcaaaaaattgtcctgaaattaatgttagccaataaaatctcaacctggccggaaattatggg 20010021  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-at 200  Q
     |  || ||||||||||          || |||||||||||||||||||| |||||||||  ||||||||||| |||||||||||||||||||| || ||    
T  20010020 gttatgggtgttatgta-ttttttcttattaaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgat 20009922  T
Q  201 aaaatcattcttgatatcta 220  Q
    |||||||||| |||||||||    
T  20009921 aaaatcattcatgatatcta 20009902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 29737181 - 29737406
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    |||||||||||||  |||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||| | || |||||||||||||    
T  29737181 taagaatgacatggtagaataatcacccttagattttattaagaaattgtcccgaaattaatgttagccaataaaatctcaacctgaccggaaatcatgg 29737280  T
Q  101 gatggtgagtgttatgta-----nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatcttt 195  Q
    | | ||| | ||||||||               ||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||| |||||||    
T  29737281 ggtagtgggagttatgtatttttttttctttctatgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatcttt 29737380  T
Q  196 ctt-ataaaatcattcttgatatcta 220  Q
    ||| ||||||||||||||||||||||    
T  29737381 cttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 37477103 - 37476880
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||| |   |||||||||||||||    
T  37477103 taagaatgacatggcagaataatcatccttaaattttatcaagaaattgtactgaaattaatgttagccaataaaatctctgtcgggccggaaatcatgg 37477004  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||           |  ||  | ||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||      
T  37477003 ggtggtgggtgttatgtattttttttctgtataaaatgaataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttga 37476904  T
Q  201 aaaatcattcttgatatctagcat 224  Q
     |||||||||||||||||||||||    
T  37476903 taaatcattcttgatatctagcat 37476880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 18037020 - 18037242
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||| |||||||||| ||||||| ||||||||||||||| ||||||||||||| |   |||| ||||||||||    
T  18037020 taagaatgacatggcagaataatcacccttaaattttatcaaaaaattgtactgaaattaatgttagccaataaaatctctgtcgggccagaaatcatgg 18037119  T
Q  101 gatggtgagtgttatgta-nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctta 199  Q
    | ||||| ||||||||||           |||| |||  |||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||||     
T  18037120 ggtggtgggtgttatgtatttttttttttatgagagg--aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttg 18037217  T
Q  200 taaaatcattcttgatatctagcat 224  Q
      |||||||| ||||||||||||||    
T  18037218 ataaatcattgttgatatctagcat 18037242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 35444601 - 35444714
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||| |||||| ||||||||||    
T  35444601 aagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcagcctggccgaaaatcatggg 35444700  T
Q  102 atggtgagtgttat 115  Q
    |||||| |||||||    
T  35444701 atggtgggtgttat 35444714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 15238425 - 15238649
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||  |||||||||||| |   ||||||||||||||||    
T  15238425 aagaatgacatggcagaataatcaccattagattttatcaagaaattgtactgaaattaatgttagtcaataaaatctctgtcgggccggaaatcatggg 15238524  T
Q  102 atggtgagtgttatgta----nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttct 197  Q
     ||||| ||||||| ||              ||||||||  |||||||||||||||||||||||  ||||||||||| |||||||||||| ||| ||| |    
T  15238525 gtggtgggtgttatttatttttattttttttatgaaagg--aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttt 15238622  T
Q  198 tataaaatcattcttgatatctagcat 224  Q
    |   |||||||||||||||||||||||    
T  15238623 tgataaatcattcttgatatctagcat 15238649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 35445567 - 35445662
Alignment:
Q  129 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    ||||||| ||||||||||||||||||||||||  |||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcat 35445662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 35876414 - 35876509
Alignment:
Q  129 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcat 35876509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 36790489 - 36790276
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||  | |||| || |  | |    
T  36790489 taagaatgacatggcagaataattacccttaaattttatcaagaaattgttctgaaattaatgttagccaataaaatctcagtctagccgaaattttttg 36790390  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-a 199  Q
    | ||||| ||||||||||          ||||||||||||||||||||||           || |||||||||| |||||||||||||||||||| || |    
T  36790389 ggtggtgggtgttatgtatttttgttttatgaaaggttaataaatgagac-----------agagattattgtgtcatgtcattcttgaatctttgttga 36790301  T
Q  200 taaaatcattcttgatatctagcat 224  Q
    ||||| |||| ||||||| ||||||    
T  36790300 taaaaccattattgatatttagcat 36790276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 40880814 - 40880715
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||| ||||| ||||||| |||||||| ||||||||||||||||| |||||||||||| ||| ||| || ||||||||||    
T  40880814 aagaatgacatggcagaataatcatccttaaattttatgaagaaattatcctgaaattaatgttagccaataaaatcttagcctggtcgaaaatcatggg 40880715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 4974723 - 4974795
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 4974795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 42611888 - 42611816
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 42611816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 45637789 - 45637717
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 45637717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 224
Target Start/End: Original strand, 15577841 - 15577910
Alignment:
Q  156 tctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||||| ||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 15577910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 15329350 - 15329278
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 15329278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 34482912 - 34482840
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||    
T  34482912 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcat 34482840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 48880915 - 48880987
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 48880987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 224
Target Start/End: Complemental strand, 40880708 - 40880646
Alignment:
Q  161 gagtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||| ||| || ||||||||  || |||||||||||||||||||||||    
T  40880708 gagtgattattgtgccatgttattttttaatctttc-aatcaaatcattcttgatatctagcat 40880646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 35444635 - 35444563
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| | |||||| ||||| |||| ||||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcat 35444563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 15238459 - 15238414
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
    ||||||||  ||||||||| ||||||||||||||||||| ||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 15238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 18037055 - 18036990
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 217  Q
    |||| |||| ||||||||| ||||||||||||||| ||| |||||| | |||||| ||||||||||    
T  18037055 aaatttaagggtgattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatat 18036990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 37477079 - 37477140
Alignment:
Q  164 tgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||||||| ||||||||||||||| ||| |||||| | |||||| |||||||||| ||||||    
T  37477079 tgattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcat 37477140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 3962056 - 3961984
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||| |||| ||||||||| || |||||||||||| ||  |||||| |||||||| |||||||||| ||||||    
T  3962056 aaatttaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 3961984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 25167838 - 25167910
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||||||||  |||||||| ||||||||||||||| ||  |||||| | |||||| |||||||||| ||||||    
T  25167838 aaatctaaggatgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcat 25167910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 29737216 - 29737144
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| | ||||||||||||| ||  |||||| | |||||| |||||||||| ||||||    
T  29737216 aaatctaagggtgattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcat 29737144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 36790454 - 36790526
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||| |||| || |||||| ||||||||||||||| ||| |||||| |||||| | |||||||||| ||||||    
T  36790454 aaatttaagggtaattattctgccatgtcattcttaaatttttcttgataaaaactttcttgatatatagcat 36790526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 4e-82; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 326 - 484
Target Start/End: Complemental strand, 53763694 - 53763536
Alignment:
Q  326 tccttacacacagacacgtgcaaaatgttaagtattatgtgattgatcatttattttaatttcatgtcggcatttgaatgctgcatgaaaagaagagggg 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  53763694 tccttacacacagacacgtgcaaaatgttaagtattatgtgattgatcatttattttaatttcatgttggcatttgaatgctgcatgaaaagaagagggg 53763595  T
Q  426 gctaataatgcacaagactcaaatagtagtgttttcaactcatatgaatgataaagaag 484  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53763594 gctaataatgcacaagactcaaatagtagtgttttcaactcatatgaatgataaagaag 53763536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 9088913 - 9089135
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  9088913 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 9089012  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||    
T  9089013 gtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttata 9089112  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  9089113 aaatcattcttgatatctagcat 9089135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 44893235 - 44893013
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||||||||||    
T  44893235 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccgaaaatcatggg 44893136  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
    |||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||| |||||||||    
T  44893135 atggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttata 44893036  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  44893035 aaatcattcttgatatctagcat 44893013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 44893469 - 44893691
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||||||||||    
T  44893469 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccgaaaatcatggg 44893568  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
    |||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||| |||||||||    
T  44893569 atggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttata 44893668  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  44893669 aaatcattcttgatatctagcat 44893691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 46441887 - 46442109
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| | |||||||||||||||||    
T  46441887 aagaatgacatggcaaaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcaacctggccggaaatcatggg 46441986  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  46441987 gtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttata 46442086  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  46442087 aaatcattcttgatatctagcat 46442109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 47290109 - 47290331
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  47290109 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 47290208  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          |||||||  |||||||||||||||||||||||  ||||||||||| ||||||||||||||||| |||||||||    
T  47290209 gtggtgggtgttatgtatcttttttttatgaaagaataataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatttttcttata 47290308  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  47290309 aaatcattcttgatatctagcat 47290331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 53123074 - 53123296
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  53123074 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatggg 53123173  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||    
T  53123174 gtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttata 53123273  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  53123274 aaatcattcttgatatctagcat 53123296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 7745135 - 7744916
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  7745135 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctggccggaaatcatgg 7745036  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||  ||||||||||||| ||||||||||  ||||||||||||| ||||||||||||||||||||||||    
T  7745035 ggtggtgggtgttatgtattttttttttatgaaatattaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaatctttcttat 7744936  T
Q  201 aaaatcattcttgatatcta 220  Q
    ||||||||||||||||||||    
T  7744935 aaaatcattcttgatatcta 7744916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 21802344 - 21802120
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg- 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||     
T  21802344 aagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagtctggccggaaatcatggg 21802245  T
Q  101 --gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
      | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  21802244 gtggtggtgggtgttatgta-tttttttttatgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 21802146  T
Q  199 ataaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||||    
T  21802145 ataaaatcattcttgatatctagcat 21802120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 31078841 - 31078619
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  31078841 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 31078742  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     || || ||||||||||          ||||||| ||||||||||||| ||||||||||   |||||||||||||||||||||||||||| ||| |||||    
T  31078741 gtgatgggtgttatgtatcttttttttatgaaagattaataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaattttttttata 31078642  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  31078641 aaatcattcttgatatctagcat 31078619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 10442811 - 10442587
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  10442811 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctggccggaaatcatggg 10442712  T
Q  102 atggtgagtgttatg-tannnnnnnnnnatgaaaggtt-aataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctta 199  Q
     ||||| |||||||| |            |||||| || ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  10442711 gtggtgggtgttatgtttttttttttttttgaaagattaaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctta 10442612  T
Q  200 taaaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||||    
T  10442611 taaaatcattcttgatatctagcat 10442587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 50156601 - 50156383
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||| | |||||||||||| |||||||||||||||| ||||||||||||||||    
T  50156601 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcataaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 50156502  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||| ||||||||| || |||||||||||||||| ||||||||    
T  50156501 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaag-gtgattattatgtcatgtcattcttgaatttttcttat 50156403  T
Q  201 aaaatcattcttgatatcta 220  Q
    ||||||||||||||||||||    
T  50156402 aaaatcattcttgatatcta 50156383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 24128282 - 24128504
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  24128282 aagaatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 24128381  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     |||||  |||||||||          ||||||| ||||||||||||||||||||||||  || ||||||||| |||||||||||| ||| |||||||||    
T  24128382 gtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttata 24128481  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  24128482 aaatcattcttgatatctagcat 24128504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 36073393 - 36073614
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||  || |||||||||||||| |||||||||||||||| || ||||||||||||||    
T  36073393 aagaatgacatggcagaataatcacccttaaattttatcaagaaatattcatgaaattaatgttaaccaataaaatctcagcctgaccggaaatcatggg 36073492  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  36073493 gtggtgggtgttatgtatcttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttata 36073591  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  36073592 aaatcattcttgatatctagcat 36073614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 49387910 - 49387691
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  49387910 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctagccggaaatcatggg 49387811  T
Q  102 atggtgagtgttatgta-nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
     |||||  |||||||||           ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  49387810 gtggtggatgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttat 49387711  T
Q  201 aaaatcattcttgatatcta 220  Q
    |||||||| |||||||||||    
T  49387710 aaaatcatccttgatatcta 49387691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 22199304 - 22199524
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| ||| ||||| |||||||| |||||||||||||||| ||||| |||||||||||    
T  22199304 aagaatgacatggcagaataatcagccttagattttatcaagaaatagtcttgaaactaatgttagccaataaaatctcagcctggccagaaatcatggg 22199403  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  22199404 -tggtgggtgttatgtattttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttata 22199501  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  22199502 aaatcattcttgatatctagcat 22199524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 17655473 - 17655696
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  17655473 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctggccggaaatcatggg 17655572  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-at 200  Q
    ||| || ||||||| |           ||||||||||||||||||||||||||||||||  || |||||| || |||||||||||| |||||||||| ||    
T  17655573 atgatgggtgttatatgtattttttttatgaaaggttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgat 17655672  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    |||||||||||| |||||||||||    
T  17655673 aaaatcattcttaatatctagcat 17655696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 36072990 - 36073216
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  36072990 aagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatggg 36073089  T
Q  102 atggtgagtgttatgta----nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttct 197  Q
     ||||| ||||||||||              ||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| |||||    
T  36073090 gtggtgggtgttatgtatcttttttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttct 36073189  T
Q  198 tataaaatcattcttgatatctagcat 224  Q
    |||||||||||| ||||||||||||||    
T  36073190 tataaaatcatttttgatatctagcat 36073216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 4751489 - 4751712
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||  ||| |||||||||||||    
T  4751489 aagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggtcggaaatcatggg 4751588  T
Q  102 atggtgagtgttatgta-nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
     ||||| ||||||||||           ||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||| ||| ||||||||    
T  4751589 gtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttaaatttttcttat 4751688  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||| ||||||||||||||||||    
T  4751689 aaaattattcttgatatctagcat 4751712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 2624880 - 2625098
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||  || ||||||||||||||  ||||||||||||||  ||||||||||||||||     
T  2624880 aagaatgaaatggcagaataatcacccttagattttatcaagaaataatcatgaaattaatgttaatcaataaaatctcagtctggccggaaatcatgga 2624979  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||| |||||||| ||||||||||||||||    
T  2624980 gtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttcttata 2625079  T
Q  202 aaatcattcttgatatcta 220  Q
    |||||||||||||||||||    
T  2625080 aaatcattcttgatatcta 2625098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 42671711 - 42671930
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||  |||||||||||| ||||    
T  42671711 taagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctaaaattaatgttaaccaataaaatctcaatttggccggaaattatgg 42671810  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-a 199  Q
    | || ||||||||||||           | |||||||||| |||||||||| |||||||||| |||||||| || ||||||||||||||||||||||| |    
T  42671811 ggtgatgagtgttatgt-ttttttttttacgaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttga 42671909  T
Q  200 taaaatcattcttgatatcta 220  Q
    |||||||||||||||||||||    
T  42671910 taaaatcattcttgatatcta 42671930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 23964488 - 23964269
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||||||||||||| || ||||||||||||     
T  23964488 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagtcaataaaatctcagcctgaccggaaatcatgc 23964389  T
Q  101 gatggtgagtgttatgta-nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctta 199  Q
    | ||||| ||||||||||           ||||||| ||||||||||||| ||||||||||   |||||||| ||||||||||||||| |||||||||||    
T  23964388 ggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttctta 23964289  T
Q  200 taaaatcattcttgatatct 219  Q
    ||||||||||||||||||||    
T  23964288 taaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 33530710 - 33530484
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| |||||||| |||||||||| ||||| |||||||||||||||||    
T  33530710 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaactaatgttagccaataaaatttcagcctggccggaaatcatggg 33530611  T
Q  102 atggtgagtgttatg-----tannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttc 196  Q
     ||||| ||||||||     |           ||||||| ||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||||     
T  33530610 -tggtgggtgttatgttttttttattttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttt 33530512  T
Q  197 ttataaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||||||    
T  33530511 ttataaaatcattcttgatatctagcat 33530484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 30563255 - 30563448
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatg 104  Q
    ||||||| | ||||||| ||| | |||||||||||||||||||| ||||| ||||||||||  |||||||||||||||| ||||||||||||||||| ||    
T  30563255 aatgacacggcagaatagtcatctttagattttatcaagaaattatcctgcaattaatgttggccaataaaatctcagcctggccggaaatcatggggtg 30563354  T
Q  105 gtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
    ||| ||||||||||          ||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  30563355 gtgggtgttatgtattttttttttatgaaaggttaataaataagactgaaatctaagtgtgattattgtgtcatgtcattcttgaatctttctt 30563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 37934963 - 37934745
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    ||||||||||||  |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||  ||| ||||||| |||||    
T  37934963 aagaatgacatggtagaatactcacccttagattttatcaagaaattatcctgaaattaatgttaaccaataaaatctcagtctggtcggaaattatggg 37934864  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-at 200  Q
    ||||||  |||||||||          ||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||||| ||||||||||||| ||    
T  37934863 atggtggttgttatgta-tttttttttatgaaaggttaataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttcttaat 37934765  T
Q  201 aaaatcattcttgatatcta 220  Q
    ||||||| || | |||||||    
T  37934764 aaaatcagtcataatatcta 37934745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 229 - 327
Target Start/End: Complemental strand, 53763978 - 53763883
Alignment:
Q  229 ccataattaattatgattatatttcaggcttgcaactgtgaggaagatggtttagttacttctgatttgattagttatagatataggtatatagtactc 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  53763978 ccataattaattatgattatatttcaggcttgcaactgtgaggaagatggtttagttacttctgatttgattagttata---ataggtatatagtactc 53763883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 37219671 - 37219893
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatg 104  Q
    |||||||||  | ||||||||| |||| ||||||||||||||||||||||||||||||||||  ||||||||||||||  |||||||||||||| || ||    
T  37219671 aatgacatggtaaaataatcactcttaaattttatcaagaaattgtcctgaaattaatgttagtcaataaaatctcagtctggccggaaatcattgggtg 37219770  T
Q  105 gtgagtgttatgtannnnnnnnnn------atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
     ||  |||||||||                ||||||||||||||||| ||| |||||||||||  |||||||| ||||||||||||||| ||||||||||    
T  37219771 atggatgttatgtatttttttttattttttatgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttctt 37219870  T
Q  199 -ataaaatcattcttgatatcta 220  Q
     ||||||||||||||||||||||    
T  37219871 gataaaatcattcttgatatcta 37219893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 24392710 - 24392939
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||  |||||||||||| |   ||||||||||||||||    
T  24392710 aagaatgacatggcagaataatcacccttaaattttatcaagaaattgtactgaaattaatgttagtcaataaaatctctgtcgggccggaaatcatggg 24392809  T
Q  102 atggtgagtgttatgta---------nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatc 192  Q
     || || ||||||||||                   ||||||||  |||||||||||||||||||||||  |||||||||||| ||||||||||| |||     
T  24392810 gtgatgggtgttatgtattttttttttattttttttatgaaagg--aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaata 24392907  T
Q  193 tttcttataaaatcattcttgatatctagcat 224  Q
    ||||||   |||||||||||||||||||||||    
T  24392908 tttcttgataaatcattcttgatatctagcat 24392939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 3 - 224
Target Start/End: Complemental strand, 11314255 - 11314051
Alignment:
Q  3 agaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggga 102  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||| |||||||       ||||||||| ||||||||||     
T  11314255 agaatgacatgacagaataatcatccttagattatatcaagaaattgttctgaaattaatgttagccaataa-------gcttggccgaaaatcatggg- 11314164  T
Q  103 tggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ata 201  Q
          ||||||||||           | |||||||||||||| |||||  |||||||| |||||||||||| ||||||||||||| ||||||||| |||    
T  11314163 ------gtgttatgtactttttt----taaaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgata 11314074  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  11314073 aaatcattcttgatatctagcat 11314051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 36073766 - 36073650
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    |||||||||||||||| |||||||||  ||||||||||| ||||||||||||| |||||||| ||| ||||||||||||||| |||||||||||||||||    
T  36073766 taagaatgacatgacaaaataatcacttttagattttatgaagaaattgtcctaaaattaatattagccaataaaatctcagtttggccggaaatcatgg 36073667  T
Q  101 gatggtgagtgttatgt 117  Q
    | ||||| |||||||||    
T  36073666 ggtggtgcgtgttatgt 36073650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 44744481 - 44744690
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatg 104  Q
    |||||||||  |||||||||||||||| |||||||||| |||||||||||||||| ||||||  | ||||||| ||||  |||||||||||||| || ||    
T  44744481 aatgacatggtagaataatcacccttaaattttatcaaaaaattgtcctgaaattgatgttagtcgataaaat-tcagtctggccggaaatcatagggtg 44744579  T
Q  105 gtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttataaaa 204  Q
    ||| ||||||||||             | |||||||||||| |||||||||||||||  | ||||||| | ||||||||||||||||||   | ||||||    
T  44744580 gtgggtgttatgtatttttttttg--tataggttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaatct---tgataaaa 44744674  T
Q  205 tcattcttgatatcta 220  Q
    ||||| ||||||||||    
T  44744675 tcatttttgatatcta 44744690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 156 - 224
Target Start/End: Complemental strand, 25063443 - 25063374
Alignment:
Q  156 tctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25063443 tctaagagtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcat 25063374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 267 - 432
Target Start/End: Complemental strand, 10655647 - 10655482
Alignment:
Q  267 tgaggaagatggtttagttacttctgatttgattagttatagatataggtatatagtactccttacacacagacacgtgcaaaatgttaagtattatgtg 366  Q
    |||||||||| ||||| ||| || ||||||||  ||| ||||||||  |||  ||||||||| || ||||| ||||  ||| |||||||| | ||  |||    
T  10655647 tgaggaagattgtttatttagttttgatttgaaaagtcatagatatgagtaggtagtactccctatacacaaacaccagcagaatgttaattgttgagtg 10655548  T
Q  367 attgatcatttattttaatttcatgtcggcatttgaatgctgcatgaaaagaagagggggctaata 432  Q
    | | |||||||| | |||||||| || ||||||| |||||||||||||||||||| ||||||||||    
T  10655547 aataatcatttactataatttcacgtaggcatttaaatgctgcatgaaaagaagaaggggctaata 10655482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 267 - 432
Target Start/End: Complemental strand, 10869792 - 10869627
Alignment:
Q  267 tgaggaagatggtttagttacttctgatttgattagttatagatataggtatatagtactccttacacacagacacgtgcaaaatgttaagtattatgtg 366  Q
    |||||||||| ||||| ||| || ||||||||  ||| ||||||||  |||  ||||||||| || ||||| ||||  ||| |||||||| | ||  |||    
T  10869792 tgaggaagattgtttatttagttttgatttgaaaagtcatagatatgagtaggtagtactccctatacacaaacaccagcagaatgttaattgttgagtg 10869693  T
Q  367 attgatcatttattttaatttcatgtcggcatttgaatgctgcatgaaaagaagagggggctaata 432  Q
    | | |||||||| | |||||||| || ||||||| |||||||||||||||||||| ||||||||||    
T  10869692 aataatcatttactataatttcacgtaggcatttaaatgctgcatgaaaagaagaaggggctaata 10869627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 33530676 - 33530748
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||| |||||||| |||||||||| ||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcat 33530748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 36073349 - 36073261
Alignment:
Q  137 ttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| |||||||||||||||||| |||||| || ||| |||||||| |||||||||| ||||||||||| ||  ||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcat 36073261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 10442777 - 10442849
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 10442849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 31078807 - 31078879
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 31078879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 49387876 - 49387948
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 49387948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 2624914 - 2624842
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| ||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcat 2624842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 7745100 - 7745172
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 7745172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 21802310 - 21802382
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||  |||||||||| ||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcat 21802382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 22199338 - 22199266
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||||||||  |||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 22199266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 24392744 - 24392672
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||| |||| ||||||||| ||||||||||||||||||| |||||| | |||||| |||||||||| ||||||    
T  24392744 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcat 24392672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 36073024 - 36072952
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||| ||||| ||||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 36072952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 36073731 - 36073795
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgata 216  Q
    |||||||| |||||||||| || |||||||||||| |||||||||| |||||||| |||||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 46441921 - 46441849
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| ||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcat 46441849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 47290143 - 47290071
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| ||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcat 47290071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 9111337 - 9111407
Alignment:
Q  31 agattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||||||||||||  |||||||| |||| |||||||||| ||  | |||||| ||||||||||    
T  9111337 agattttatcaagaaattgtctcgaaattaaagttaaccaataaaatttctacctggccgaaaatcatggg 9111407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 53123108 - 53123035
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt--ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  ||||||  | |||||| |||||||||| ||||||    
T  53123108 aaatctaagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcat 53123035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 4751523 - 4751451
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| ||||||    
T  4751523 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcat 4751451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 24128316 - 24128244
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||||||||  |||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| ||||||    
T  24128316 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcat 24128244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 36073427 - 36073355
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||| |||| ||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| ||||||    
T  36073427 aaatttaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcat 36073355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 44893503 - 44893431
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttg-aatctttcttataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| |||||||||||||||| ||| ||| | | |||||| |||||||||| ||||||    
T  44893503 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcat 44893431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 42671746 - 42671675
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagca 223  Q
    ||||||||| ||||||||| ||||||||||||||| ||| ||| || |||||||| || ||||||| |||||    
T  42671746 aaatctaagggtgattattctgccatgtcattcttaaattttttttgataaaatctttattgatatatagca 42671675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 17655507 - 17655461
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctta 199  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||||    
T  17655507 aaatctaagggtgattattctgccatgtcattcttgaaattttctta 17655461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 21802157 - 21802191
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattt 36  Q
    ||||||||||||||| |||||||||||||||||||    
T  21802157 aagaatgacatgacacaataatcacccttagattt 21802191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 982721 - 982660
Alignment:
Q  386 ttcatgtcggcatttgaatgctgcatgaaaagaagagggggctaataatgcacaagactcaa 447  Q
    ||||||| ||||| ||||||| ||||  |||||||| ||| |||||||||||| ||||||||    
T  982721 ttcatgtaggcatctgaatgcagcatataaagaagaagggactaataatgcaccagactcaa 982660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 9088947 - 9088910
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaa 190  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  9088947 aaatctaagggtgattattctgccatgtcattcttgaa 9088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 11314089 - 11314122
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagatt 35  Q
    ||||||||||||||| ||||||||||||||||||    
T  11314089 aagaatgacatgacacaataatcacccttagatt 11314122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 23964453 - 23964518
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattctt-gaatctttcttataaaatcattcttgatat 217  Q
    ||||||||| ||||||||| |||||||||||||||  ||| ||| | |||||||| ||||||||||    
T  23964453 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 23964518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 44893201 - 44893238
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaa 190  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  44893201 aaatctaagggtgattattctgccatgtcattcttgaa 44893238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 50156566 - 50156638
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  |||||| | |||||| ||||| |||| ||||||    
T  50156566 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcat 50156638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 2e-81; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 4892244 - 4892467
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  4892244 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 4892343  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  4892344 ggtggtgggtgttatgtatcttcttttaatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttat 4892443  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  4892444 aaaatcattcttgatatctagcat 4892467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 25398280 - 25398503
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  25398280 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 25398379  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||| |||||| ||||||||    
T  25398380 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaatttttcttat 25398479  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  25398480 aaaatcattcttgatatctagcat 25398503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 33584352 - 33584129
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  33584352 taagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 33584253  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  33584252 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttat 33584153  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  33584152 aaaatcattcttgatatctagcat 33584129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 8145418 - 8145638
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||||||| ||| |||||||||||||    
T  8145418 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaactaatgttagccaataaaatctcagcctggtcggaaatcatggg 8145517  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  8145518 -tggtgggtgttatgtattttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttata 8145615  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  8145616 aaatcattcttgatatctagcat 8145638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 5 - 224
Target Start/End: Original strand, 12850847 - 12851067
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatg 104  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||    
T  12850847 aatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtg 12850946  T
Q  105 gtgagtgttatgta-nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttataaa 203  Q
    ||| ||||||||||           ||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| |||||||||||    
T  12850947 gtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaa 12851046  T
Q  204 atcattcttgatatctagcat 224  Q
    |||||||||||||||||||||    
T  12851047 atcattcttgatatctagcat 12851067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 2477678 - 2477901
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||||||| ||||| ||||||||||||||||    
T  2477678 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagtcaataaaatttcagcctggccggaaatcatgg 2477777  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||| ||||||||||||||  ||||| |||||||||||||||||||  |||||||||||    
T  2477778 ggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgatcattgtgccatgtcattcttagatctttcttat 2477877  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  2477878 aaaatcattcttgatatctagcat 2477901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 11361154 - 11360947
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  11361154 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctggccggaaatcatgg 11361055  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||| ||| ||||||||||   |||||||||||||||||||||||||||||||||||||    
T  11361054 ggtggtgggtgttatgtattttttttgtatgaaagattaataaattagattgaaatctaaagatgattattgtgccatgtcattcttgaatctttcttat 11360955  T
Q  201 aaaatcat 208  Q
    ||||||||    
T  11360954 aaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 37321816 - 37321593
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||| |||||||||| |||| ||| |||||||||||||| |||||||||||||||  | ||||||||||||||    
T  37321816 taagaatgacatggcagaataatcacccttaaattttatcaataaatagtcttgaaattaatgttagccaataaaatctcagtctagccggaaatcatgg 37321717  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  |||||||||||||||| |||||||||||| ||||||||    
T  37321716 ggtggtgggtgttatgtattttttatttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaatatttcttat 37321617  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  37321616 aaaatcattcttgatatctagcat 37321593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 5 - 224
Target Start/End: Complemental strand, 3522025 - 3521807
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatg 104  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||||||||||| || |||||||||||||||||| ||    
T  3522025 aatgacatggcagaataatcaccattagattttatcaagaaatagttctgaaattaatgttaaccaataaaatcttagtttggccggaaatcatggggtg 3521926  T
Q  105 gtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttataaaa 204  Q
    ||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||| ||||||||||||    
T  3521925 gtgggtgttatgta-tctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaa 3521827  T
Q  205 tcattcttgatatctagcat 224  Q
    ||||||||||||||||||||    
T  3521826 tcattcttgatatctagcat 3521807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 6043533 - 6043312
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| || ||||||||||| ||| |||||||||||||||| |||||||||||||||||    
T  6043533 aagaatgacatggaagaataatcacccttagattttatcaagaaatagtgctgaaattaatattaaccaataaaatctcagcctggccggaaatcatggg 6043434  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     || || ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||| |||||||||    
T  6043433 gtgttgggtgttatgta-tttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttata 6043335  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  6043334 aaatcattcttgatatctagcat 6043312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 14138711 - 14138932
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| ||  |||||||||||||    
T  14138711 aagaattacatggcagaataatcacccttaaattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctgatcggaaatcatggg 14138810  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  14138811 gtggtgggtgttatgta-tttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttata 14138909  T
Q  202 aaatcattcttgatatctagcat 224  Q
    ||||||||||| |||||||||||    
T  14138910 aaatcattcttaatatctagcat 14138932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 3362821 - 3363044
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  3362821 aagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatggg 3362920  T
Q  102 atggtgagtgttatgta-nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
     ||||| ||||||||||           ||||||| ||||||||||||||||||||||||  ||| |||||||| |||||||||||| ||| ||||||||    
T  3362921 gtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgtcatgtcattcttaaatttttcttat 3363020  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  3363021 aaaatcattcttgatatctagcat 3363044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 38899748 - 38899525
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||  |||||| ||||||||||    
T  38899748 aagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccgaaaatcatggg 38899649  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaa-tctttcttat 200  Q
     ||||| ||||||| ||          ||||||| ||||||||||||||||||||||||  ||| |||||||||||||||||||||||| | ||| ||||    
T  38899648 gtggtgggtgttatatatcttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttttttat 38899549  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  38899548 aaaatcattcttgatatctagcat 38899525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 22913076 - 22912857
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |   |||| |||||||||||    
T  22913076 aagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaattaatgttagccaataaaatctctgtcgggccagaaatcatggg 22912977  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     |||||  |||||||||          |||| ||   ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||       
T  22912976 gtggtggatgttatgta-tttttttttatgagag--aaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat 22912880  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  22912879 aaatcattcttgatatctagcat 22912857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 4434029 - 4433845
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  4434029 aagaatgatatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatggg 4433930  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattctt 187  Q
    |||||| ||||||||||          ||||||| ||||||||| ||||||||||||||  |||||||||||||||||||||||||    
T  4433929 atggtgggtgttatgta-tttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 12614755 - 12614537
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||        | |||||    
T  12614755 aagaatgacatgacataataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctg-------tttatggg 12614663  T
Q  102 atggtgagtgtta--tgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt- 198  Q
    |||||| ||||||  | |           ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||| ||     
T  12614662 atggtgggtgttattttttttttttttttatgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttg 12614563  T
Q  199 ataaaatcattcttgatatctagcat 224  Q
    |||||||||| |||||||||||||||    
T  12614562 ataaaatcatacttgatatctagcat 12614537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 2 - 198
Target Start/End: Complemental strand, 31640962 - 31640767
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  31640962 aagaatgacatggcagaataaccacccttagattttatcaagaaattgtcatgaaattaatgttagccaataaaatctcagcctggccggaaatcatggg 31640863  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagt-gattattgtgccatgtcattcttgaatctttctt 198  Q
     ||||| ||||||||||          ||||||||||||||||| |||    ||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  31640862 gtggtgggtgttatgta-tttttttttatgaaaggttaataaataagatatcaatctaa-agtcgattattctgccatgtcattcttgaatctttctt 31640767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 17545707 - 17545482
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||  |||||||||||| |   ||||||||||||||||    
T  17545707 aagaatgacatggcagaataatcaccattagattttatcaagaaattgtactgaaattaatgttagtcaataaaatctctgtcgggccggaaatcatggg 17545608  T
Q  102 atggtgagtgttatgta-----nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttc 196  Q
     ||||| ||||||| ||                |||||||  |||||||||||||||||||||||  ||||||||||| |||||||||||| ||| |||     
T  17545607 gtggtgggtgttatttatttttattttttttattgaaagg--aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatatttt 17545510  T
Q  197 ttataaaatcattcttgatatctagcat 224  Q
    ||   |||||||||||||||||||||||    
T  17545509 ttgataaatcattcttgatatctagcat 17545482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 212
Target Start/End: Original strand, 27481869 - 27482077
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    ||||||||||||   ||||||||||  |||| |||||| |||||||||||  ||||||||||||| |||||||||| ||| | | | |||||||||||||    
T  27481869 aagaatgacatg---gaataatcacatttag-ttttatgaagaaattgtcacgaaattaatgttagccaataaaatttcatcctagtcggaaatcatggg 27481964  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagact-gaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-a 199  Q
     ||||| ||||||||||          || |||||||||||||| ||| |  ||||||||  ||||||||| ||  ||||||||||||||||||| || |    
T  27481965 gtggtgggtgttatgtattttttttttataaaaggttaataaataagattaaaaatctaaaggtgattattctgttatgtcattcttgaatcttttttga 27482064  T
Q  200 taaaatcattctt 212  Q
    |||||||||||||    
T  27482065 taaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 12614721 - 12614793
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| || ||||||||||||||||||||||| |||||||  |||||||||| ||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcat 12614793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 22913042 - 22913114
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||| | |||||| |||||||||| ||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcat 22913114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 36880299 - 36880229
Alignment:
Q  48 tgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatggtgagtgttatgta 118  Q
    ||||||||||||||||||| |||||||||| ||||  ||| ||||||| |||||||||||  |||||||||    
T  36880299 tgtcctgaaattaatgttagccaataaaatttcagtctggtcggaaattatgggatggtggatgttatgta 36880229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 8145452 - 8145387
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 217  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 2477713 - 2477641
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 2477641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 6043499 - 6043571
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| | ||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 6043571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 11361119 - 11361191
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 11361191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 13664737 - 13664792
Alignment:
Q  137 ttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatc 192  Q
    ||||||||| ||||||||||||||| ||||||||| |  |||||||||||||||||    
T  13664737 ttaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaatc 13664792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 31640928 - 31640973
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  31640928 aaatctaagggtggttattctgccatgtcattcttgaatctttctt 31640973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 3362855 - 3362783
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| ||||||    
T  3362855 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcat 3362783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 4433995 - 4434067
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| |||||| |||||||||||  |||||| | |||||| |||||||||| ||||||    
T  4433995 aaatctaagggtgattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcat 4434067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 4892279 - 4892207
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  |||||| | |||||| |||||||||| ||||||    
T  4892279 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcat 4892207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 25398315 - 25398243
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  |||||| | |||||| |||||||||| ||||||    
T  25398315 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcat 25398243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 38899714 - 38899786
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| ||||||    
T  38899714 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcat 38899786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 10458464 - 10458409
Alignment:
Q  163 gtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 217  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||  ||||||||||    
T  10458464 gtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 13664787 - 13664753
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattt 36  Q
    ||||||||||||| |||||||||||||||||||||    
T  13664787 aagaatgacatgatagaataatcacccttagattt 13664753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 17545673 - 17545718
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
    ||||||||  ||||||||| ||||||||||||||||||| ||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 17545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 12850878 - 12850806
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||| ||||| |||||||||||| ||| |  |||||| |||||||| |||||||||| ||||||    
T  12850878 aaatctaagggtggttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcat 12850806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 13664664 - 13664700
Alignment:
Q  31 agattttatcaagaaattgtcctgaaattaatgttat 67  Q
    |||||||||||||||||||| | ||||||||||||||    
T  13664664 agattttatcaagaaattgttccgaaattaatgttat 13664700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 33584317 - 33584389
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||| |||| ||||||||| ||||||||||||||| ||  |||||| | |||||| |||||||||| ||||||    
T  33584317 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcat 33584389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 36880213 - 36880148
Alignment:
Q  129 atgaaaggttaataaatgagactg-aaatctaagagtgat----tattgtgccatgtcattcttga 189  Q
    |||||||||||||| ||||||||| ||||||||| |||||    ||||||| ||||||||||||||    
T  36880213 atgaaaggttaatagatgagactgaaaatctaagggtgattatatattgtgtcatgtcattcttga 36880148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 154; Significance: 2e-81; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 9293598 - 9293375
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  9293598 aagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctggccggaaatcatggg 9293499  T
Q  102 atggtgagtgttatgta-nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
     ||||| ||||||||||           ||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  9293498 gtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttat 9293399  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  9293398 aaaatcattcttgatatctagcat 9293375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 33380249 - 33380472
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  33380249 taagaatgacatggctgaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 33380348  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  33380349 ggtggtgggtgttatgtatctttttttaatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttat 33380448  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  33380449 aaaatcattcttgatatctagcat 33380472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 23268084 - 23267862
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  23268084 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatggg 23267985  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||| |||||||||    
T  23267984 gtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttata 23267885  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  23267884 aaatcattcttgatatctagcat 23267862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 35160799 - 35161024
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  35160799 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatgg 35160898  T
Q  101 gatggtgagtgttatgta--nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
    | ||||| ||||||||||            ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||    
T  35160899 ggtggtgggtgttatgtatcttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt 35160998  T
Q  199 ataaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||||    
T  35160999 ataaaatcattcttgatatctagcat 35161024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 7475530 - 7475308
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  7475530 aagaatgacatgatagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 7475431  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||| || ||| |||||||||||| |||||||||    
T  7475430 gtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaatttttcttata 7475331  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  7475330 aaatcattcttgatatctagcat 7475308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 10661929 - 10662153
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||| |    
T  10661929 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatag 10662028  T
Q  101 gatggtgagtgttatgta-nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctta 199  Q
    | ||||| ||||||||||           ||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||||||| |||||||    
T  10662029 ggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttctta 10662128  T
Q  200 taaaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||||    
T  10662129 taaaatcattcttgatatctagcat 10662153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 3989118 - 3989341
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||  ||||||||||||||||    
T  3989118 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagtctggccggaaatcatgg 3989217  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  || ||||||||| ||||||||||||| |||||||||||    
T  3989218 ggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttggatctttcttat 3989317  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  3989318 aaaatcattcttgatatctagcat 3989341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 31174856 - 31174635
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||  || ||||||||||||||    
T  31174856 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagtctgaccggaaatcatggg 31174757  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||| ||||||||||  | | |||||||| ||||||||||||||||||||||||||    
T  31174756 gtggtgggtgttatgta-tttttttttatgaaagattaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaatctttcttata 31174658  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  31174657 aaatcattcttgatatctagcat 31174635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 13354889 - 13355113
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctc-agcttggccggaaatcatgg 100  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  13354889 aagaatgatatggcagaataattacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctctagcctggccggaaatcatgg 13354988  T
Q  101 gatggtgagtgttatgtannnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctta 199  Q
      ||||| ||||||||||           ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  13354989 agtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttctta 13355088  T
Q  200 taaaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||||    
T  13355089 taaaatcattcttgatatctagcat 13355113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 43330955 - 43331177
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| || |   ||||||||||||||||    
T  43330955 aagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaattaatgttagccaataaaatttctgtcgggccggaaatcatggg 43331054  T
Q  102 atggtgagtgttatgta--nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctta 199  Q
     ||||| ||||||||||            |||| |||  ||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||     
T  43331055 gtggtgggtgttatgtattttttttttttatgagagg--aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttg 43331152  T
Q  200 taaaatcattcttgatatctagcat 224  Q
      |||||||||||||||||||||||    
T  43331153 ataaatcattcttgatatctagcat 43331177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 2 - 198
Target Start/End: Original strand, 21936124 - 21936321
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctc-agcttggccggaaatcatgg 100  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  21936124 aagaatgatatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctctagcctggccggaaatcatgg 21936223  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
    | ||||| ||||||||||          ||||||| ||||||||||| ||||||||||||  |||||||||||||||||||||||||| ||| |||||    
T  21936224 ggtggtgggtgttatgtattttttttttatgaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattcttggatcattctt 21936321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 9723447 - 9723668
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||| |  |||||||||||||    
T  9723447 taagaatgacatgacagaataatcacccttaaattttatcaagaaattgtcccgaaattaatgttagctaataaaatctcagcctcaccggaaatcatgg 9723546  T
Q  101 gatggtgagtgttatgta-nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt- 198  Q
    | ||||| ||||||||||           |||||| || ||||||| ||||||||||||||  ||||||||| || |||||||||||| ||| ||||||     
T  9723547 ggtggtgggtgttatgtatttttttttttatgaaaagtgaataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttg 9723646  T
Q  199 ataaaatcattcttgatatcta 220  Q
    || |||||||||||||||||||    
T  9723647 atcaaatcattcttgatatcta 9723668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 21393711 - 21393486
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||  |   |||||||||||||||    
T  21393711 taagaatgacatggtagaataatcacccttagattttatcaagaaattgtactgaaattaatgttaaccaataaaatctatgtcgggccggaaatcatgg 21393612  T
Q  101 gatggtgagtgttatgta-----nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatcttt 195  Q
    | ||||| ||||||||||               ||||||||  |||||||||||||||||| |||| |||||||||||| |||||||||||||||| |||    
T  21393611 ggtggtgggtgttatgtattttttattttttttatgaaagg--aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat-ttt 21393515  T
Q  196 cttataaaatcattcttgatatctagcat 224  Q
    |||   |||||||||||||||||||||||    
T  21393514 cttgataaatcattcttgatatctagcat 21393486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 2 - 189
Target Start/End: Complemental strand, 14941388 - 14941199
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||| ||||||||| |    
T  14941388 aagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaat-aaatctcagcctggccagaaatcatgag 14941290  T
Q  102 atggtgagtgttatgta---nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttga 189  Q
     ||||| ||||||||||             ||||||||||||||||| ||| |||||||||||  ||||||||||| ||||||||||||||    
T  14941289 gtggtgggtgttatgtattttttttattttatgaaaggttaataaataagattgaaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 16767480 - 16767288
Alignment:
Q  16 agaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatggtgagtgttat 115  Q
    ||||||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||||||||||  |||||||||||||| || ||||| |||||||    
T  16767480 agaataatcactcttaaattttatcaagaaattatcctgaaattaatgttagccaataaaatctcagtctggccggaaatcatagggtggtgggtgttat 16767381  T
Q  116 gta----------nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
    |||                    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16767380 gtatttttattttattttattttatgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttctt 16767288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 27847675 - 27847791
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  ||||||||||||||| || || |||||||||||    
T  27847675 aagaatgacatgacagaataatcaccgttagattttatcaaaaaattgtcctgaaattaatgttagtcaataaaatctcagcctgaccagaaatcatggg 27847774  T
Q  102 atggtgagtgttatgta 118  Q
     ||||| ||||||||||    
T  27847775 gtggtgggtgttatgta 27847791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 31 - 224
Target Start/End: Complemental strand, 40262729 - 40262536
Alignment:
Q  31 agattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatggtgagtgttatgtannnnnnnnnnat 130  Q
    |||||||||||||||||||||| ||||||||| ||| |||||||||||||| | || |||||||| ||||| ||||| ||||||||||          ||    
T  40262729 agattttatcaagaaattgtcccgaaattaatattagccaataaaatctcaccctgaccggaaattatggggtggtgggtgttatgtatttattttttat 40262630  T
Q  131 gaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    |||| ||||| |||| | |||||||||||||||| |||||| | ||||||||||||||||||  || |  |||  |||||||||||||||||||    
T  40262629 gaaacgttaacaaataaaactgaaatctaagagttattattctaccatgtcattcttgaatccatcgtgaaaatccattcttgatatctagcat 40262536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 22592880 - 22592978
Alignment:
Q  129 atgaaaggttaataaatgagactgaaa--tctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||| |||||||||  |||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcat 22592978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 22591525 - 22591639
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||| ||| |||||||||| |||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| | || ||||||||||||    
T  22591525 aagaatgatatggcagaataatcccccttaaattttattaagaaattgtcctgaaattaatgttagccaataaaatctcagcctagcaggaaatcatggg 22591624  T
Q  102 atggtgagtgttatg 116  Q
     ||||| || |||||    
T  22591625 gtggtgggtattatg 22591639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 14941354 - 14941426
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcat 14941426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 34321042 - 34320991
Alignment:
Q  139 aataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaa 190  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 34320991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  139 aataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcat 208  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||||| || |||||||||| ||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 37335756 - 37335829
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaa 75  Q
    |||||||||||| ||||||||||||  ||||||| |||||| ||||||| |||| |||||||||| ||||||||    
T  37335756 aagaatgacatggcagaataatcacttttagattgtatcaaaaaattgttctgatattaatgttagccaataaa 37335829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 9293564 - 9293636
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcat 9293636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 31174822 - 31174887
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 217  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatat 31174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 37335789 - 37335744
Alignment:
Q  154 aatctaagagtgattattgtgccatgtcattcttgaatctttctta 199  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  37335789 aatctaaaagtgattattctgccatgtcattcttgaatctttctta 37335744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 10661964 - 10661892
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 10661892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 21936158 - 21936086
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| ||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcat 21936086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 23268050 - 23268122
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| ||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcat 23268122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 35160834 - 35160762
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 35160762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 43330989 - 43330917
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||| || | |||||| |||||||||| ||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcat 43330917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 217  Q
    ||||||||  ||||||||| || ||||||||||||||||||||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 9723482 - 9723410
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||| |||| ||||||||| || |||||||||||| |||||||||| |||||||| ||||| |||| ||||||    
T  9723482 aaatttaagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcat 9723410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 39819272 - 39819308
Alignment:
Q  184 tcttgaatctttcttataaaatcattcttgatatcta 220  Q
    |||||||| ||||||||||||||||||||||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatcta 39819308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 9723635 - 9723600
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattt 36  Q
    ||||||||||||||||||||||||||| ||||||||    
T  9723635 taagaatgacatgacagaataatcacctttagattt 9723600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 22592940 - 22592905
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagatttt 37  Q
    ||||||||||||||| ||||||||||||||||||||    
T  22592940 aagaatgacatgacacaataatcacccttagatttt 22592905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 9293412 - 9293446
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattt 36  Q
    ||||||||||||||| |||||||||||||||||||    
T  9293412 aagaatgacatgacacaataatcacccttagattt 9293446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 13354923 - 13354858
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 217  Q
    ||||||||| || |||||| |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  13354923 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 13354858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 7475496 - 7475568
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| |  |||||||||||||||  |||||| | |||||| |||||||||| ||||||    
T  7475496 aaatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcat 7475568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 21393676 - 21393748
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| | ||||||||||||| ||| |||||| | |||||  |||||||||| ||||||    
T  21393676 aaatctaagggtgattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatatatagcat 21393748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 33380284 - 33380212
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| |||||||||  |||||||||||||| ||  |||||| | |||||| |||||||||| ||||||    
T  33380284 aaatctaagggtgattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcat 33380212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 149; Significance: 2e-78; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 25979 - 26201
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  25979 aagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcaggctggccggaaatcatggg 26078  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
    |||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  26079 atggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttata 26178  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  26179 aaatcattcttgatatctagcat 26201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 16027 - 16249
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  16027 aagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcaggctggccggaaatcatggg 16126  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
    |||||| ||||||||||          ||||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||    
T  16127 atggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttata 16226  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  16227 aaatcattcttgatatctagcat 16249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 8445 - 8603
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  8445 aagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaaccaataaaatctcaggctggccggaaatcatggg 8544  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaa 160  Q
    |||||| ||||||||||          ||||||| ||||||||||||||||||||||||    
T  8545 atggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaa 8603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 217  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 217  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 217  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 2e-78; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 40215031 - 40215253
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  40215031 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcctggccggaaatcatggg 40215130  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||  ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  40215131 gtggtgggtgttatgtattttttttttatgaaatattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttata 40215230  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  40215231 aaatcattcttgatatctagcat 40215253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 25463718 - 25463941
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||    
T  25463718 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcctggccggaaatcatgg 25463817  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||    
T  25463818 ggtggtgggtgttatgtattttttttttatgaaagattaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttggatctttcttat 25463917  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  25463918 aaaatcattcttgatatctagcat 25463941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 6883530 - 6883752
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  6883530 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 6883629  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  |||| |||| ||||||||||||||||||| |||||||||    
T  6883630 gtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaatttttcttata 6883729  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  6883730 aaatcattcttgatatctagcat 6883752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 19015447 - 19015669
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  19015447 aagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 19015546  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  19015547 gtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttata 19015646  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||| ||||||    
T  19015647 aaatcattcttgatatgtagcat 19015669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 41876465 - 41876242
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| |||||||||    
T  41876465 taagaatgacatggcagaataatcacccttaggttttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccgaaaatcatgg 41876366  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||| ||||||||||||||| ||||||||    
T  41876365 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttcttat 41876266  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  41876265 aaaatcattcttgatatctagcat 41876242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 36966730 - 36966508
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  36966730 aagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggccggaaatcatggg 36966631  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  |||||||||||||||||| |||||||||| |||||||||    
T  36966630 gtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgttattcttgaatttttcttata 36966531  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  36966530 aaatcattcttgatatctagcat 36966508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 37821856 - 37821634
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||||||||||    
T  37821856 aagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccgaaaatcatggg 37821757  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     || || ||||||||||          ||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||||||| |||||||||    
T  37821756 gtgttgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttata 37821657  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  37821656 aaatcattcttgatatctagcat 37821634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 51737547 - 51737770
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||| | | ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| || ||| |||||||||    
T  51737547 taagaatgataaggcagaataatcacccttaaattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctgaccgaaaatcatgg 51737646  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  51737647 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttat 51737746  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  51737747 aaaatcattcttgatatctagcat 51737770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 44094741 - 44094962
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  44094741 aagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttagccaataaaatctcagtctggccggaaatcatggg 44094840  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||||||||    
T  44094841 gtggtgggtgttatgta-tttttctttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttata 44094939  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||| ||||||||||||||||||    
T  44094940 aaataattcttgatatctagcat 44094962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 18404484 - 18404713
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    |||||||||||||  |||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| |||||||||| |    
T  18404484 taagaatgacatggtagaataatcacctttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagtttggtcggaaatcatag 18404583  T
Q  101 gatggtgagtgttatgtannnnnnnnnn------atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctt 194  Q
    | ||||| ||||||||||                ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||    
T  18404584 ggtggtgggtgttatgtattttttattttattttatgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctt 18404683  T
Q  195 tcttataaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||||||||    
T  18404684 tcttataaaatcattcttgatatctagcat 18404713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 9910315 - 9910095
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  9910315 aagaatgacatggcagaataatcaaccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtatggccggaaatcatggg 9910216  T
Q  102 atggtgagtgttatg--tannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctta 199  Q
     ||||| ||||||||  |           ||||||| ||||||||| || |||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  9910215 gtggtgggtgttatgcatcttttttttttatgaaagattaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 9910116  T
Q  200 taaaatcattcttgatatcta 220  Q
    |||||||||||||||||||||    
T  9910115 taaaatcattcttgatatcta 9910095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 20305123 - 20304930
Alignment:
Q  32 gattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatggtgagtgttatgtannnnnnnnnn-at 130  Q
    ||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||           ||    
T  20305123 gattttatcaagaaataatcctgaaattaatgttagccaataaaatctcagcttggccgaaaatcatgggatggtgggtgttatgtatttttttttttat 20305024  T
Q  131 gaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    ||||| || |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20305023 gaaagattgataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 20304930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 3559659 - 3559882
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||| ||||||||||||    
T  3559659 taagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcctgggcggaaatcatgg 3559758  T
Q  101 gatggtgagtgtt-atgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctta 199  Q
    | ||||| ||||| |||||          ||||||| |||||||||||||||||||| |||  |||||||||||| ||| ||||||||| ||||||||||    
T  3559759 ggtggtgggtgttaatgta-tttttttttatgaaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttctta 3559857  T
Q  200 taaaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||||    
T  3559858 taaaatcattcttgatatctagcat 3559882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 25973457 - 25973672
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||| | |||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||    |||||| ||||||||||    
T  25973457 aagaatgacagg-cagaataatcacccttagattttatcaagaaataatcctgaaattaatgttagccaataaaatctc----tggccgaaaatcatggg 25973551  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| |||||||||||||||||||| |||  |||||||||||| |||||||||||||||| |||||||||    
T  25973552 gtggtgggtgttatgtatttttttt--atgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttcttata 25973649  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  25973650 aaatcattcttgatatctagcat 25973672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 32000289 - 32000066
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||  |    |||||||||||||||    
T  32000289 aagaatgacatgacagaataaccacccttagattttatcaagaaattgtactgaaattaatgttagccaataaaatctatgtcgagccggaaatcatggg 32000190  T
Q  102 atggtgagtgttatgtannnnnnnnnn---atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
     ||||| ||||||||||             |||||| |  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32000189 gtggtgggtgttatgtattttttattttttatgaaatg--aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt 32000092  T
Q  199 ataaaatcattcttgatatctagcat 224  Q
       |||||||||||||||||||||||    
T  32000091 gataaatcattcttgatatctagcat 32000066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 27523278 - 27523062
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||||||||||||    
T  27523278 taagaatgacatgacagaataatcacccttaaattttatcaagaaattgtcccgaaattaatgttagccaataaaatctcatcctggccggaaatcatgg 27523179  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-a 199  Q
    | || || ||||||||||          |||||| |||||||||| ||||| ||||| ||| ||||||| | ||||||   ||||||||||||||||| |    
T  27523178 ggtgatgggtgttatgta-tttttttttatgaaaagttaataaataagactaaaatcaaagggtgattaatctgccatacgattcttgaatctttcttga 27523080  T
Q  200 taaaatcattcttgatat 217  Q
    ||||||||||||||||||    
T  27523079 taaaatcattcttgatat 27523062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 33786657 - 33786431
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| || |||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||| |   ||||||||||||||||    
T  33786657 aagaatgacatggcacaataatcacccttaaattttatcaagaaattgtactgaaattaatgttagccaataaaatctctgtcgggccggaaatcatggg 33786558  T
Q  102 atggtgagtgttatgtannnnnnnnnn------atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatcttt 195  Q
     |||||  ||||||| |                ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33786557 gtggtggatgttatgcattttttttttttttttatgaaagg--aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttt 33786460  T
Q  196 cttataaaatcattcttgatatctagcat 224  Q
    |||   |||||||||||||||||||||||    
T  33786459 cttgataaatcattcttgatatctagcat 33786431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 40273745 - 40273973
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| || |||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||| |   ||||||||||||||||    
T  40273745 aagaatgacatgtcaaaataatcacccttagattttattaagaaattgtactgaaattaatgttagccaataaaatctctgtcgggccggaaatcatggg 40273844  T
Q  102 atggtgagtgttatgta--------nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatct 193  Q
     ||||| ||||||||||                  ||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  40273845 gtggtgggtgttatgtattatttttttttttttttatgaaagg--aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatat 40273942  T
Q  194 ttcttataaaatcattcttgatatctagcat 224  Q
    |||||   |||||||||||||||||||||||    
T  40273943 ttcttgataaatcattcttgatatctagcat 40273973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 44691051 - 44690825
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||| ||||| ||||||||| || ||||||||||||||||||||| |||  |||||||||||| |||||||||||||||  |||||||||||||||||    
T  44691051 aagaattacatggcagaataataactcttagattttatcaagaaattatcccaaaattaatgttagccaataaaatctcagtctggccggaaatcatggg 44690952  T
Q  102 atggtgagtgttatgta-------nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctt 194  Q
     || || ||||||||||                 || |||| ||||||||| |||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  44690951 gtgttgggtgttatgtatttattttttattttttataaaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctt 44690852  T
Q  195 tctt-ataaaatcattcttgatatcta 220  Q
    |||| ||||||||||| ||||||||||    
T  44690851 tcttgataaaatcattattgatatcta 44690825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 19722970 - 19722903
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatcta 220  Q
    ||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatcta 19722903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 16045820 - 16045746
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaa 76  Q
    |||||||||||| |||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||    
T  16045820 aagaatgacatggcagaataatcacccttagattttatcaagaaatattcttgaaattaatgttagccaataaaa 16045746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 33786623 - 33786694
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcat 33786694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 10167442 - 10167658
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    |||||||||||||| ||||||||||   |||||||||||||| |||||||| | |||||||||||| |||||||||| |  |  || |||||||| ||||    
T  10167442 taagaatgacatgatagaataatcatttttagattttatcaaaaaattgtctttaaattaatgttagccaataaaattttggtctgaccggaaattatgg 10167541  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaat-ctttctta 199  Q
      ||||| ||||| ||||          ||||||  ||||||||| ||||||||||||||  |||||||||||  ||| | |||||| |||  ||| |||    
T  10167542 tttggtgtgtgttgtgta-tttttttttatgaaaaattaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatattttttta 10167640  T
Q  200 taaaatcattcttgatat 217  Q
    ||||||||||||| ||||    
T  10167641 taaaatcattcttaatat 10167658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 34519815 - 34519874
Alignment:
Q  16 agaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaa 75  Q
    |||||||||  |||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  34519815 agaataatcgaccttagattttatcaaaaaattgtcctgaaattaatgttagccaataaa 34519874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 16045786 - 16045858
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 16045858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 40215065 - 40214993
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 40214993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 40273779 - 40273707
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||| | |||||| |||||||||||||||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcat 40273707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 52064445 - 52064377
Alignment:
Q  157 ctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||| |||| |||| || ||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcat 52064377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 35 - 192
Target Start/End: Original strand, 52329345 - 52329508
Alignment:
Q  35 tttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatggtgagtgttatgta-------nnnnnnnnn 127  Q
    ||||||||||||  || | ||||||||||||| |||||||||||||||| ||||| ||||||||||| ||||  ||||||||||                    
T  52329345 tttatcaagaaagagttccgaaattaatgttaaccaataaaatctcagcctggccagaaatcatggg-tggtaggtgttatgtatttattttttattttt 52329443  T
Q  128 natgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatc 192  Q
     |||||| |||||||| | ||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  52329444 tatgaaacgttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaatc 52329508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 44691017 - 44691082
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatc-tttcttataaaatcattcttgatat 217  Q
    |||||||||||| |||||| |||||||| ||||||||||| ||| |||||||||| ||||||||||    
T  44691017 aaatctaagagttattattctgccatgtaattcttgaatctttttttataaaatctttcttgatat 44691082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 25463753 - 25463681
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||    
T  25463753 aaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcat 25463681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 44094775 - 44094703
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||  |||||||||| ||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcat 44094703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 22157433 - 22157338
Alignment:
Q  129 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    |||||| |||||||||| ||| |||||| |||| ||||||||| | ||||||||||||| ||||  || ||  || ||||| ||||||||||||||    
T  22157433 atgaaatgttaataaataagattgaaatttaagtgtgattattctcccatgtcattcttaaatccatcataagaattcatttttgatatctagcat 22157338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 51621002 - 51621085
Alignment:
Q  31 agattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatggtgagtgttatgta 118  Q
    ||||||||| ||||||| |||| |||||||||||||  |||||||||||||| |    ||||||||||||| |||||  |||||||||    
T  51621002 agattttattaagaaatagtccagaaattaatgttagtcaataaaatctcagat----cggaaatcatggggtggtggatgttatgta 51621085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 6883564 - 6883492
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| | |||||| ||||| |||| ||||||    
T  6883564 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcat 6883492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 9910281 - 9910353
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||||||||  |||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| ||||||    
T  9910281 aaatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcat 9910353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 19015481 - 19015409
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| |||||| |||||||||||  |||||| | |||||| |||||||||| ||||||    
T  19015481 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcat 19015409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 32000255 - 32000327
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||| ||||| || |||||||||||||||| |||||| | |||||| |||||||||| ||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcat 32000327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 36966696 - 36966768
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| |||||| |||||||||||  |||||| | |||||| |||||||||| ||||||    
T  36966696 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcat 36966768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 37821822 - 37821894
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| |||||| |||||||||||  |||||| | |||||| |||||||||| ||||||    
T  37821822 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcat 37821894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 28391455 - 28391508
Alignment:
Q  54 gaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatggtg 107  Q
    |||||||||||||  ||||||||| |  || |||||||||||||||||||||||    
T  28391455 gaaattaatgttagtcaataaaatttgtgcatggccggaaatcatgggatggtg 28391508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 44690859 - 44690892
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagatt 35  Q
    |||||||||||| |||||||||||||||||||||    
T  44690859 aagaatgacatggcagaataatcacccttagatt 44690892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 3559694 - 3559622
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattctt-gaatctttcttataaaatcattcttgatatctagcat 224  Q
    |||| |||| ||||||||| |||||||||||||||  ||| ||| | |||||||| |||||||||| ||||||    
T  3559694 aaatttaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcat 3559622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 18404519 - 18404447
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||  ||||||||| | ||||||||||||| ||  |||||| |||||||| |||||||||| ||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 18404447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 22159267 - 22159231
Alignment:
Q  30 tagattttatcaagaaattgtcctgaaattaatgtta 66  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  22159267 tagattttatcaagaaattgtcccgaaattattgtta 22159231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 146; Significance: 1e-76; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 33145754 - 33145977
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||| |||     
T  33145754 taagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcagcctgaccggaaattatga 33145853  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||| ||||||          ||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  33145854 ggtggtgggtggtatgtattttttttttatgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttat 33145953  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  33145954 aaaatcattcttgatatctagcat 33145977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 3137436 - 3137214
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  3137436 aagaatgacatggcaaaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 3137337  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     || || ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  3137336 gtgatgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttata 3137237  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  3137236 aaatcattcttgatatctagcat 3137214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 3574550 - 3574326
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaa-ttaatgttatccaataaaatctcagcttggccggaaatcatg 99  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  3574550 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaaattaatgttagccaataaaatctcagcttggccggaaatcatg 3574451  T
Q  100 ggatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctta 199  Q
    || ||||| ||||||||||          ||||||| |||||||||||||||||||||||   |||||||||||| ||||||||||||| ||||||||||    
T  3574450 gggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttggatctttctta 3574351  T
Q  200 taaaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||||    
T  3574350 taaaatcattcttgatatctagcat 3574326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 5 - 224
Target Start/End: Complemental strand, 22426363 - 22426145
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatg 104  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||| ||||  ||||||||||||||||| ||    
T  22426363 aatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatttcagtctggccggaaatcatggggtg 22426264  T
Q  105 gtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttataaaa 204  Q
    ||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  22426263 gtgggtgttatgtattttttttt-atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaatctttcttataaaa 22426165  T
Q  205 tcattcttgatatctagcat 224  Q
    ||||||||||||||||||||    
T  22426164 tcattcttgatatctagcat 22426145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 3456106 - 3456329
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||  ||||||||||||||||    
T  3456106 taagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctggaattaatgttaaccaataaaatctcagtctggccggaaatcatgg 3456205  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||   |||||| |||| |||||||||||||||||||||||||    
T  3456206 ggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaagatgattagtgtgtcatgtcattcttgaatctttcttat 3456305  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  3456306 aaaatcattcttgatatctagcat 3456329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 33113836 - 33114059
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||  |||||||||||||||||    
T  33113836 aagaattacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatttcagtctggccggaaatcatggg 33113935  T
Q  102 atggtgagtgttatgta-nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
     ||||| ||||||||||           ||||||| ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  33113936 gtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttat 33114035  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  33114036 aaaatcattcttgatatctagcat 33114059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 3089459 - 3089684
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||  || |||||||||||||| |||||||||||||||||||||||||||||||||    
T  3089459 taagaatgacatggcagaataatcacccttagattttatcaagaaatattcttgaaattaatgttagccaataaaatctcagcttggccggaaatcatgg 3089558  T
Q  101 gatggtgagtgttatgta--nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
    | ||||| ||| ||||||            ||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||  |||||||||    
T  3089559 ggtggtgggtgctatgtattatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttctt 3089658  T
Q  199 ataaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||||    
T  3089659 ataaaatcattcttgatatctagcat 3089684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 6041927 - 6042142
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| || ||||||||||||||    
T  6041927 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctgaccggaaatcatggg 6042026  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     |||||  |||||| |           ||||||  ||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  6042027 gtggtggttgttattt-------ttttatgaaaaattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttata 6042119  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  6042120 aaatcattcttgatatctagcat 6042142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 37217076 - 37216853
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||||||| | || | ||||||| |    
T  37217076 taagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcatgaaattaatgttaaccaataaaatctcagccttgctgaaaatcatag 37216977  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  37216976 ggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttat 37216877  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  37216876 aaaatcattcttgatatctagcat 37216853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 37522095 - 37522318
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| ||| |||||||||||||| |||||||||||||| | ||||||||||| ||||    
T  37522095 taagaatgacatgacagaataatcaccctaagattttataaagaaatagtcatgaaattaatgttaaccaataaaatctcaacctggccggaaattatgg 37522194  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||| ||||||||||||||| ||| ||||||||    
T  37522195 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttcttat 37522294  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  37522295 aaaatcattcttgatatctagcat 37522318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 19650923 - 19650700
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaa-ttaatgttatccaataaaatctcagcttggccggaaatcatg 99  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||  ||| ||||| ||||||||| || |||||||||||||||||||||||||||||    
T  19650923 taagaatgacatggcagaataatcaccattagattttatcaagaaacagtcttgaaaattaatgttagccgataaaatctcagcttggccggaaatcatg 19650824  T
Q  100 ggatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctta 199  Q
    || ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||||||    
T  19650823 gggtggtgggtgttatgtattttttttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttctta 19650725  T
Q  200 taaaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||||    
T  19650724 taaaatcattcttgatatctagcat 19650700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 2754759 - 2754984
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| || |||||||||||||    
T  2754759 taagaatgacatggcagaataatcacctttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctgaccggaaatcatgg 2754858  T
Q  101 gatggtgagtgttatgta--nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
    | | ||| ||||||||||            ||||||| |||||||||||||||||||| |||  ||||||||||||||||||||||||| ||||||||||    
T  2754859 ggtagtgggtgttatgtattttttttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttctt 2754958  T
Q  199 ataaaatcattcttgatatctagcat 224  Q
    ||||||| ||||||||||||||||||    
T  2754959 ataaaatgattcttgatatctagcat 2754984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 36865050 - 36864832
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    |||||||||||||  ||||||||||||||||| ||||||||| |||| |||||||||||||||||| |||||| ||||||||    ||||||||||||||    
T  36865050 taagaatgacatggtagaataatcacccttaggttttatcaaaaaatagtcctgaaattaatgttagccaatagaatctcag----gccggaaatcatgg 36864955  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-a 199  Q
    ||||||| ||||||||||          |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| || |    
T  36864954 gatggtgggtgttatgtattttttat--atgaaatgttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttga 36864857  T
Q  200 taaaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||||    
T  36864856 taaaatcattcttgatatctagcat 36864832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 8320607 - 8320382
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||| ||| || |||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  8320607 taagaatgatatggcaaaataatcacccttaaattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcctggccagaaatcatgg 8320508  T
Q  101 ga-tggtgagtgttatgtannnnnnnnnn-atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
    |  | ||| ||||||||||           ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  8320507 gggtagtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 8320408  T
Q  199 ataaaatcattcttgatatctagcat 224  Q
    ||||||||||| ||||||||||||||    
T  8320407 ataaaatcattattgatatctagcat 8320382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 48160947 - 48161171
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||| | |||||||| |||||    
T  48160947 taagaatgatatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatattagccaataaaatctcagcctagccggaaaccatgg 48161046  T
Q  101 gatggtgagtgttatgta-nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctta 199  Q
    | ||||| ||||||||||           ||||||  ||||||||||||||||||||||||  |||||||||||| |||||| |||||| || |||||||    
T  48161047 ggtggtgggtgttatgtatttttttttttatgaaaaattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttctta 48161146  T
Q  200 taaaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||||    
T  48161147 taaaatcattcttgatatctagcat 48161171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 47738148 - 47738373
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||| ||| ||||||||| ||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||||| || || |||||||||||    
T  47738148 aagaatgatatggcagaataattacctttagattttataaaaaaattgtcctgaaattaatgttagccaataaaatctcagcctgaccagaaatcatggg 47738247  T
Q  102 atggtgagtgttatgtannnnnnnnnn------atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatcttt 195  Q
     ||||| ||||||||||                |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  47738248 gtggtgggtgttatgtatttttttttattttttatgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatcttt 47738347  T
Q  196 ctt-ataaaatcattcttgatatcta 220  Q
    ||| ||||||||||||||||||||||    
T  47738348 cttgataaaatcattcttgatatcta 47738373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 234
Target Start/End: Complemental strand, 9797051 - 9796819
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||| || |||||||||||| ||||||||||||| |   ||||| ||||||||||    
T  9797051 aagaatgacatggcagaataatcaccattagattttatcaagaaattgtacttaaattaatgttagccaataaaatctctgtcgggccgaaaatcatggg 9796952  T
Q  102 atggtgagtgttatgtannnnnnnnnn--atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctta 199  Q
     ||||| || |||||||            ||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  9796951 gtggtgggtcttatgtatttttcttttttatgaaagg--aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttg 9796854  T
Q  200 taaaatcattcttgatatctagcatgttgccataa 234  Q
      ||||||||||||||||||||||| || ||||||    
T  9796853 ataaatcattcttgatatctagcattttcccataa 9796819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 33839573 - 33839794
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||||||   |||||| |||||||||    
T  33839573 taagaataacatgacagaataatcaccattagattttatcaagaaattgttttgaaattaatgttagccaataaaatctcaatctggccgtaaatcatgg 33839672  T
Q  101 gatggtgagtgttatgta----nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttc 196  Q
    | ||||  ||||||||||              |||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  33839673 ggtggtaggtgttatgtattttttctttttttatgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttc 33839772  T
Q  197 tt-ataaaatcattcttgatat 217  Q
    || |||||||||||||||||||    
T  33839773 ttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 5 - 189
Target Start/End: Original strand, 42297909 - 42298092
Alignment:
Q  5 aatgacatga-cagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggat 103  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||  ||||||||||||||||| |    
T  42297909 aatgacatgatcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagtctggccggaaatcatggggt 42298008  T
Q  104 ggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttga 189  Q
    |||   |||||||||          ||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  42298009 ggtagatgttatgta--ttttttttatgaaaggttaataaatgagactgaaatctaagggtggttattgtgtcatgtcattcttga 42298092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 34482932 - 34482688
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccgg---------- 91  Q
    |||||||| |||  |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||              
T  34482932 aagaatgatatggtagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 34482833  T
Q  92 ------------aaatcatgggatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatg 179  Q
                |||||||||||||||| || |||||||          ||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  34482832 gtggtgggtcggaaatcatgggatggtgggtattatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 34482733  T
Q  180 tcattcttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  34482732 tcattcttgaatttttcttataaaatcattcttgatatctagcat 34482688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 31 - 224
Target Start/End: Original strand, 40327897 - 40328097
Alignment:
Q  31 agattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatggtgagtgttatgtannnnnnnnnnat 130  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| || ||||| ||||||||||          ||    
T  40327897 agattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcaacctggccggaaatcatagggtggtgggtgttatgtattttatttttat 40327996  T
Q  131 g------aaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagca 223  Q
           |||||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40327997 ttttatcaaaggtaaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagca 40328096  T
Q  224 t 224  Q
    |    
T  40328097 t 40328097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 8362067 - 8361839
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |   ||||||||||||||||    
T  8362067 aagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaattaatgttagccaataaaatctctgtcgggccggaaatcatggg 8361968  T
Q  102 atggtgagtgttatgta--------nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatct 193  Q
     ||||| |||| |||||                  ||||||  | ||||||||||||||||||||||| |||||||||||| |||||||||||||||| |    
T  8361967 gtggtgggtgtcatgtattttttttttttttttttatgaaa--tgaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatat 8361870  T
Q  194 ttcttataaaatcattcttgatatctagcat 224  Q
    |||||   |||||||||||||||||||||||    
T  8361869 ttcttgataaatcattcttgatatctagcat 8361839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 30385057 - 30385170
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatg 104  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||    
T  30385057 aatgacatggcagaataatcacccttatattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtg 30385156  T
Q  105 gtgagtgttatgta 118  Q
    ||| ||||||||||    
T  30385157 gtgggtgttatgta 30385170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 41883245 - 41883031
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||  ||||||||||||||  ||||  |||||||||||    
T  41883245 aagaatgacatggcagaataatcacccttaaattttatcaagaaattgtcccgaaattaatgttagtcaataaaatctcagactggctagaaatcatggg 41883146  T
Q  102 atggtgagtgttatgta-nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-a 199  Q
     ||||| ||||||||||           || ||||||| |||||| ||||||||||| ||   |||||||| | |||||||||||||||||||||||| |    
T  41883145 gtggtgggtgttatgtatttttttttttataaaaggttgataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttcttca 41883046  T
Q  200 taaaatcattcttga 214  Q
    |||||||||| ||||    
T  41883045 taaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 220
Target Start/End: Original strand, 24343603 - 24343811
Alignment:
Q  15 cagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatggtgagtgtta 114  Q
    |||||||||||| ||||||||||||||||||||||| | ||||||||||||| |||||||||||||| | || ||| ||||||| || ||||| ||||||    
T  24343603 cagaataatcactcttagattttatcaagaaattgttccgaaattaatgttagccaataaaatctcatcctgaccgaaaatcatcgggtggtgggtgtta 24343702  T
Q  115 tgta--nnnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattct 211  Q
    ||||             |||||||||||||||| ||||||||||||||| ||||||||  |  |||||||||||||||||||| || |||||||||||||    
T  24343703 tgtattttttttttttttgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattct 24343802  T
Q  212 tgatatcta 220  Q
    |||||||||    
T  24343803 tgatatcta 24343811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 85 - 224
Target Start/End: Original strand, 30385527 - 30385665
Alignment:
Q  85 tggccggaaatcatgggatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcatt 184  Q
    ||||||||||||||||| ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  30385527 tggccggaaatcatggggtggtgggtgttatgtatttattttt-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 30385625  T
Q  185 cttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  30385626 cttgaatctttcttataaaatcattcttgatatttagcat 30385665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 42297395 - 42297513
Alignment:
Q  1 taagaatgacatgac-agaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatg 99  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||| || ||||||||||||    
T  42297395 taagaatgacatgactagaataatcacccttagattttatcaagaaatagttctgaaattaatgttagccaataaaatctcagcctgaccggaaatcatg 42297494  T
Q  100 ggatggtgagtgttatgta 118  Q
    || |||||  |||||||||    
T  42297495 gggtggtggatgttatgta 42297513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 41224276 - 41224499
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    ||||||||||||  ||||| |||||||||  ||||||| ||||||||||  |||||||||||||| | ||||||||||| | | || |||||||||||||    
T  41224276 aagaatgacatggtagaattatcacccttgaattttattaagaaattgtattgaaattaatgttagctaataaaatctctgttgggtcggaaatcatggg 41224375  T
Q  102 atggtgagtgttatgtannnnnnnnnn---atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
     ||||| ||||||||||             |||||||   ||||||||||| |||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  41224376 gtggtgggtgttatgtatttttttttttttatgaaaga--aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttctt 41224473  T
Q  199 ataaaatcattcttgatatctagcat 224  Q
       |||||||||||||||||||||||    
T  41224474 gataaatcattcttgatatctagcat 41224499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 11347310 - 11347427
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||  ||||  ||||||||||    
T  11347310 taagaatgacatggcagaataataacccttagattttatcaggaaatagtcctgaaattaatgttagccaataaaatctcagagtggctagaaatcatgg 11347409  T
Q  101 gatggtgagtgttatgta 118  Q
    | ||||| ||||||||||    
T  11347410 ggtggtgggtgttatgta 11347427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 26612916 - 26613008
Alignment:
Q  129 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 220  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatcta 26613008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 42921295 - 42921391
Alignment:
Q  129 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||| ||| |||||| |||||||||||||| |||||||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcat 42921391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 46918948 - 46919156
Alignment:
Q  5 aatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgggatg 104  Q
    ||||| |||| |||||||| ||| |||||||||||||||||||||||  ||||||||||||| | |||||||| |     |||| |||||||||||| ||    
T  46918948 aatgatatgatagaataattacctttagattttatcaagaaattgtctcgaaattaatgttagcaaataaaatgt-----tggctggaaatcatggggtg 46919042  T
Q  105 gtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaa 203  Q
    |||  |||||| ||          |||| || ||||||||| |||| ||||||||   ||||||||| |||||||||||| |||||||||| || |||||    
T  46919043 gtggatgttatatatatattt---atgatagattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaa 46919139  T
Q  204 atcattcttgatatcta 220  Q
    |||||||||||||||||    
T  46919140 atcattcttgatatcta 46919156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 42921185 - 42921267
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagc 83  Q
    ||||||||||||||| |||| ||  || |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  42921185 taagaatgacatgaccgaatgattgcctttagattttatcaagaaattgtcctgaatttaatgttagccaataaaatctcagc 42921267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 3137402 - 3137474
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| ||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcat 3137474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 3574515 - 3574587
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 3574587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 6041961 - 6041889
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 6041889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 33145789 - 33145718
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  ||| | |||||||| |||||||||| ||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaaattttttaataaaatctttcttgatatatagcat 33145718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 8362033 - 8362078
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 8362078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 9797017 - 9797082
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 217  Q
    ||||||||  ||||||||| ||||||||||||||||||| |||||| | |||||| ||||||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 9797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 2754794 - 2754722
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||  ||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 2754722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 11347345 - 11347273
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| || |||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||    
T  11347345 aaatctaagggttattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 11347273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 37217041 - 37217113
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||| |||| ||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| ||||||    
T  37217041 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcat 37217113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 8361876 - 8361910
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattt 36  Q
    ||||||||||||||| |||||||||||||||||||    
T  8361876 aagaatgacatgacacaataatcacccttagattt 8361910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 33145940 - 33145906
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattt 36  Q
    ||||||||||||||| |||||||||||||||||||    
T  33145940 aagaatgacatgacacaataatcacccttagattt 33145906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 36864870 - 36864904
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattt 36  Q
    ||||||||||||||| |||||||||||||||||||    
T  36864870 aagaatgacatgacacaataatcacccttagattt 36864904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 40328059 - 40328025
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattt 36  Q
    ||||||||||||||| |||||||||||||||||||    
T  40328059 aagaatgacatgacacaataatcacccttagattt 40328025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 41883211 - 41883256
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt 198  Q
    |||| |||| ||||||||| ||||||||||||||||||| ||||||    
T  41883211 aaatttaagggtgattattctgccatgtcattcttgaatttttctt 41883256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 217  Q
    ||||||||  || |||||| |||||| |||||||||||| |||||| |||||||| ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 24343624 - 24343552
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||| |||||| | | | |||||| |||||| |||||||| ||||| |||| ||||||    
T  24343624 aaatctaagagtgattattctgccatattaattttgaatttttcttgataaaatctttcttaatatatagcat 24343552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 30385088 - 30385024
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgata 216  Q
    |||| |||| ||||||||| |||||||||||| |||||  |||||| |||||||| |||||||||    
T  30385088 aaatataagggtgattattctgccatgtcatttttgaaattttcttgataaaatctttcttgata 30385024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 34482898 - 34482970
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| | |||| |||||||||||  |||||| | |||||| |||||||||| ||||||    
T  34482898 aaatctaagggtgattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcat 34482970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 145; Significance: 4e-76; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 11664 - 11882
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||| ||||||||||    
T  11664 aagaatgacatgacagaataatcacccttagattttatcaagaaatagtcatgaaattaatgttaaccaataaaatctcagcctggccgaaaatcatggg 11763  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||||||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||| ||| |||||||||    
T  11764 gtggtgagtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttata 11863  T
Q  202 aaatcattcttgatatcta 220  Q
    |||||||||||||||||||    
T  11864 aaatcattcttgatatcta 11882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 11698 - 11626
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| ||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcat 11626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 144; Significance: 2e-75; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 47893 - 48114
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  47893 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 47992  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||   |||||||||||| |||||||||||||||||||||||||    
T  47993 gtggtgggtgttatgta-tttatttttatgaaagattaataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaatctttcttata 48091  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  48092 aaatcattcttgatatctagcat 48114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 47927 - 47863
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgata 216  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgata 47863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 142; Significance: 2e-74; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 4438 - 4661
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatgg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| |||||||||    
T  4438 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccgaaaatcatgg 4537  T
Q  101 gatggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttat 200  Q
    | ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  |||||||||||||||| |||||||| ||| ||||||||    
T  4538 ggtggtgggtgttatgtatctgttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttcttat 4637  T
Q  201 aaaatcattcttgatatctagcat 224  Q
    ||||||||||||||||||||||||    
T  4638 aaaatcattcttgatatctagcat 4661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 4473 - 4401
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  |||||| | |||||| |||||||||| ||||||    
T  4473 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcat 4401  T

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Target: scaffold0096 (Bit Score: 136; Significance: 9e-71; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 41054 - 41275
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  41054 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagcctggccggaaatcatggg 41153  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     ||||| ||||||||||          ||||||| ||||||||||||||||||||||||  ||||||||||| |||| ||||||||| ||||||||||||    
T  41154 gtggtgggtgttatgta-tttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatatcattcttggatctttcttata 41252  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  41253 aaatcattcttgatatctagcat 41275  T

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Target: scaffold0096; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 41088 - 41016
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttg-aatctttcttataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| |||||||||||||||| ||| ||| | |||||||| |||||||||| ||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcat 41016  T

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Target: scaffold0471 (Bit Score: 133; Significance: 6e-69; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 12885 - 13107
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  12885 aagaatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggg 12984  T
Q  102 atggtgagtgttatgtannnnnnnnnnatgaaaggttaataaatgagactgaaatctaagagtgattattgtgccatgtcattcttgaatctttcttata 201  Q
     |||||  |||||||||          ||||||| ||||||||||||||||||||||||  || ||||||||| |||||||||||| ||| |||||||||    
T  12985 gtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttcttata 13084  T
Q  202 aaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||||||    
T  13085 aaatcattcttgatatctagcat 13107  T

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Target: scaffold0471; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 12919 - 12847
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    |||||||||  |||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| ||||||    
T  12919 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcat 12847  T

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Target: scaffold0665 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3110 - 3192
Alignment:
Q  1 taagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagc 83  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  3110 taagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagc 3192  T

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Target: scaffold0665; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 3145 - 3073
Alignment:
Q  153 aaatctaagagtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 224  Q
    ||||||||| ||||||||| ||||||||||||||| ||  ||| || |||||||| |||||||||| ||||||    
T  3145 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcat 3073  T

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Target: scaffold0041 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 85469 - 85568
Alignment:
Q  2 aagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaattaatgttatccaataaaatctcagcttggccggaaatcatggg 101  Q
    |||||||||||| ||||||||||| ||||| ||||||| |||||||| ||||||||||||||||| |||||||||||| ||| ||| || ||||||||||    
T  85469 aagaatgacatggcagaataatcatccttaaattttatgaagaaattatcctgaaattaatgttagccaataaaatcttagcctggtcgaaaatcatggg 85568  T

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Target: scaffold0041; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 85575 - 85637
Alignment:
Q  161 gagtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcat 224  Q
    |||||||||||||||||||| ||| || ||||||||  || |||||||||||||||||||||||    
T  85575 gagtgattattgtgccatgttattttttaatctttc-aatcaaatcattcttgatatctagcat 85637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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