View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7704_low_21 (Length: 289)
Name: NF7704_low_21
Description: NF7704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7704_low_21 |
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Alignment Details
Target: chr6 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 17 - 278
Target Start/End: Original strand, 34018924 - 34019185
Alignment:
| Q |
17 |
atttcttagataagatccactttgtaagtgaaatcaaattgatcaaattagacaaagatcacaaacaatatcaattgcatcactaatcatccttgtggtt |
116 |
Q |
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| T |
34018924 |
atttcttagataagatccactttgtaagtgaaatcaaattgatcaaattagacaaagatcacaaacaatatcaattgcatcactaatcatccttgtggtt |
34019023 |
T |
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| Q |
117 |
acaaaattatgaagaggttgtgaactacttgcaatgtcatgtagaacataaaaagaagagagcgcaaaagtttgagaggtatctcaaagcactatattgg |
216 |
Q |
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| T |
34019024 |
acaaaattatgaagaggttgtgaactacttgcaatgtcatgtagaacataaaaagaagagagcgcaaaagtttgagaggtatctcaaagcactatattgg |
34019123 |
T |
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| Q |
217 |
ataatctcacatactataaggaatagaataatccaattttggtgaatcatgataactttctt |
278 |
Q |
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| T |
34019124 |
ataatctcacatactataaggaatagaataatccaattttggtgaatcatgataactttctt |
34019185 |
T |
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