View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7706_high_21 (Length: 213)
Name: NF7706_high_21
Description: NF7706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7706_high_21 |
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Alignment Details
Target: chr2 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 199
Target Start/End: Complemental strand, 8254439 - 8254258
Alignment:
| Q |
18 |
caattgtagaggtaaatattataaattttggttttaaattagaataaatgttgtagacaaaaccaattctactnnnnnnnntctagatatgtccaaatca |
117 |
Q |
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| T |
8254439 |
caattgtagaggtaaatattataaattttggttttaaattagaataaatgtcgcagacaaaaccaattctactaaaaaaaatctagacatgtccaaatca |
8254340 |
T |
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| Q |
118 |
attcaagtctttacaatcaatgtgaaatcacacctacattgtgcatgtttggaaaacacccaatagtttttgaggatgaaca |
199 |
Q |
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| T |
8254339 |
attcaagtctttacaatcaatgtgaaatcacacctacattgtgcatgtttggaaaacacccaacagtttttgaggatgaaca |
8254258 |
T |
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