View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7706_low_6 (Length: 464)

Name: NF7706_low_6
Description: NF7706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7706_low_6
NF7706_low_6
[»] chr6 (23 HSPs)
chr6 (1-274)||(29755006-29755279)
chr6 (1-275)||(33310953-33311227)
chr6 (1-275)||(33308684-33308958)
chr6 (1-274)||(26068609-26068882)
chr6 (1-275)||(26066338-26066612)
chr6 (129-274)||(14507569-14507716)
chr6 (129-274)||(8995255-8995400)
chr6 (129-274)||(9019702-9019847)
chr6 (125-275)||(19227799-19227949)
chr6 (89-275)||(11983382-11983567)
chr6 (52-188)||(4816584-4816720)
chr6 (1-84)||(4816555-4816639)
chr6 (1-69)||(20915668-20915736)
chr6 (127-274)||(15530514-15530661)
chr6 (104-181)||(26084818-26084895)
chr6 (309-388)||(3639162-3639241)
chr6 (349-392)||(10871320-10871363)
chr6 (229-274)||(4816740-4816786)
chr6 (353-388)||(33091236-33091271)
chr6 (350-392)||(19694550-19694592)
chr6 (1-54)||(1072187-1072240)
chr6 (1-54)||(30729138-30729191)
chr6 (192-274)||(1072312-1072395)
[»] scaffold0140 (2 HSPs)
scaffold0140 (1-279)||(21910-22188)
scaffold0140 (1-275)||(24189-24463)
[»] chr2 (21 HSPs)
chr2 (1-275)||(36559085-36559359)
chr2 (1-274)||(45332402-45332675)
chr2 (1-274)||(36561362-36561677)
chr2 (126-275)||(19502402-19502551)
chr2 (89-276)||(24162565-24162754)
chr2 (126-274)||(19504736-19504884)
chr2 (89-277)||(27104512-27104701)
chr2 (89-275)||(21521048-21521235)
chr2 (157-275)||(43623968-43624086)
chr2 (89-182)||(13910397-13910491)
chr2 (89-271)||(6259168-6259351)
chr2 (127-188)||(42064317-42064378)
chr2 (309-388)||(38022920-38022999)
chr2 (192-275)||(40032503-40032587)
chr2 (1-54)||(22407719-22407772)
chr2 (353-388)||(20717593-20717628)
chr2 (1-54)||(24162522-24162575)
chr2 (1-54)||(27104691-27104744)
chr2 (350-395)||(28219115-28219160)
chr2 (1-54)||(42064407-42064460)
chr2 (1-54)||(43623878-43623931)
[»] chr7 (21 HSPs)
chr7 (1-274)||(9027414-9027687)
chr7 (1-275)||(22136877-22137151)
chr7 (1-275)||(40551904-40552178)
chr7 (1-275)||(22107866-22108140)
chr7 (1-275)||(40549626-40549900)
chr7 (1-274)||(2935070-2935332)
chr7 (1-275)||(1047242-1047504)
chr7 (157-274)||(40837144-40837261)
chr7 (135-274)||(3878322-3878461)
chr7 (89-274)||(27306582-27306767)
chr7 (157-277)||(26804342-26804462)
chr7 (127-274)||(25542281-25542427)
chr7 (90-187)||(44401-44499)
chr7 (89-275)||(35378-35565)
chr7 (1-54)||(35555-35608)
chr7 (1-54)||(1049605-1049658)
chr7 (127-274)||(18567363-18567510)
chr7 (1-54)||(27306539-27306592)
chr7 (127-274)||(31435439-31435586)
chr7 (104-181)||(40946167-40946244)
chr7 (2-54)||(26804499-26804551)
[»] chr5 (52 HSPs)
chr5 (1-276)||(15357068-15357343)
chr5 (1-275)||(15354792-15355066)
chr5 (1-275)||(10756959-10757233)
chr5 (1-274)||(23664834-23665107)
chr5 (1-274)||(23793480-23793753)
chr5 (1-275)||(23667108-23667382)
chr5 (51-274)||(10749505-10749728)
chr5 (1-214)||(31179681-31179894)
chr5 (1-275)||(38960352-38960605)
chr5 (53-275)||(34477412-34477633)
chr5 (1-274)||(31542442-31542704)
chr5 (277-451)||(16597610-16597783)
chr5 (80-275)||(31544797-31544993)
chr5 (89-274)||(38881845-38882031)
chr5 (2-179)||(23742076-23742256)
chr5 (157-276)||(34479855-34479974)
chr5 (157-274)||(2174680-2174797)
chr5 (157-274)||(25921874-25921992)
chr5 (127-270)||(4236374-4236517)
chr5 (157-274)||(39797849-39797966)
chr5 (53-150)||(34479773-34479869)
chr5 (86-183)||(21684811-21684909)
chr5 (1-75)||(31544975-31545049)
chr5 (1-53)||(10749704-10749756)
chr5 (220-275)||(21684915-21684970)
chr5 (1-75)||(34477382-34477456)
chr5 (127-188)||(16775983-16776044)
chr5 (229-277)||(31179888-31179936)
chr5 (192-274)||(18186504-18186587)
chr5 (1-75)||(34479743-34479817)
chr5 (157-275)||(659712-659829)
chr5 (309-388)||(8961701-8961780)
chr5 (309-388)||(30699571-30699650)
chr5 (104-181)||(4409890-4409967)
chr5 (192-275)||(20504369-20504453)
chr5 (1-54)||(21684771-21684824)
chr5 (220-275)||(36402791-36402846)
chr5 (139-188)||(659850-659899)
chr5 (1-54)||(39798004-39798057)
chr5 (104-181)||(39854317-39854394)
chr5 (353-388)||(13191724-13191759)
chr5 (1-54)||(2818646-2818699)
chr5 (1-54)||(4236545-4236598)
chr5 (104-181)||(6744894-6744971)
chr5 (104-181)||(6747137-6747214)
chr5 (192-275)||(21947769-21947853)
chr5 (1-54)||(21947943-21947996)
chr5 (1-54)||(25921783-25921836)
chr5 (1-54)||(31466288-31466341)
chr5 (1-54)||(38882021-38882074)
chr5 (192-274)||(20507918-20508001)
chr5 (105-181)||(42238047-42238123)
[»] chr3 (64 HSPs)
chr3 (1-274)||(50493676-50493948)
chr3 (52-275)||(38210066-38210288)
chr3 (51-274)||(53896532-53896754)
chr3 (80-275)||(6063812-6064007)
chr3 (277-451)||(35231747-35231921)
chr3 (80-275)||(5899456-5899653)
chr3 (80-214)||(25388657-25388791)
chr3 (89-275)||(18099521-18099708)
chr3 (89-275)||(22114656-22114843)
chr3 (80-275)||(5885982-5886178)
chr3 (157-274)||(35777163-35777280)
chr3 (89-273)||(5191374-5191559)
chr3 (89-275)||(10956378-10956564)
chr3 (143-275)||(18097291-18097423)
chr3 (80-151)||(6066139-6066210)
chr3 (1-75)||(6063756-6063830)
chr3 (189-275)||(7606878-7606964)
chr3 (1-75)||(25388773-25388847)
chr3 (157-274)||(38889757-38889875)
chr3 (1-75)||(53896504-53896578)
chr3 (127-276)||(26720266-26720415)
chr3 (1-75)||(6719419-6719493)
chr3 (4-77)||(5899633-5899706)
chr3 (89-188)||(1321247-1321347)
chr3 (157-274)||(11162891-11163008)
chr3 (145-270)||(10192401-10192525)
chr3 (89-181)||(10958674-10958767)
chr3 (89-172)||(3859350-3859434)
chr3 (89-274)||(32264394-32264580)
chr3 (1-55)||(6066105-6066159)
chr3 (89-188)||(5522966-5523066)
chr3 (4-72)||(5886163-5886231)
chr3 (164-275)||(11170144-11170255)
chr3 (157-274)||(6719532-6719651)
chr3 (229-275)||(25388617-25388663)
chr3 (1-75)||(38889914-38889988)
chr3 (229-274)||(3859317-3859362)
chr3 (173-214)||(6066211-6066252)
chr3 (145-270)||(10085481-10085605)
chr3 (1-54)||(35777317-35777370)
chr3 (302-393)||(29765208-29765300)
chr3 (229-274)||(6066246-6066291)
chr3 (104-181)||(4308648-4308725)
chr3 (1-54)||(18097209-18097262)
chr3 (1-54)||(26720444-26720497)
chr3 (104-181)||(51727373-51727450)
chr3 (302-401)||(8925816-8925916)
chr3 (349-391)||(39439851-39439893)
chr3 (1-54)||(3859424-3859477)
chr3 (1-54)||(5522923-5522976)
chr3 (1-54)||(11170300-11170353)
chr3 (1-54)||(15780756-15780809)
chr3 (1-54)||(18162560-18162613)
chr3 (1-54)||(22114613-22114666)
chr3 (104-181)||(25690723-25690800)
chr3 (104-181)||(27101627-27101704)
chr3 (1-54)||(32264351-32264404)
chr3 (104-181)||(35918316-35918393)
chr3 (350-395)||(42029272-42029317)
chr3 (104-177)||(43228108-43228181)
chr3 (1-54)||(45882835-45882888)
chr3 (1-54)||(48361978-48362031)
chr3 (302-377)||(42108244-42108320)
chr3 (129-181)||(45882752-45882804)
[»] chr4 (52 HSPs)
chr4 (1-275)||(16932099-16932361)
chr4 (1-274)||(16934453-16934714)
chr4 (1-274)||(22783056-22783317)
chr4 (1-275)||(22780691-22780953)
chr4 (88-274)||(9176848-9177035)
chr4 (80-275)||(9174490-9174685)
chr4 (80-275)||(11006585-11006782)
chr4 (127-272)||(51015042-51015187)
chr4 (89-270)||(37089727-37089910)
chr4 (89-275)||(36919940-36920126)
chr4 (89-278)||(38408989-38409179)
chr4 (89-274)||(5637822-5638006)
chr4 (157-274)||(7941133-7941251)
chr4 (89-275)||(3824926-3825113)
chr4 (157-274)||(11434769-11434887)
chr4 (86-275)||(18846922-18847114)
chr4 (89-270)||(24888594-24888776)
chr4 (1-75)||(18847102-18847176)
chr4 (134-274)||(36921894-36922033)
chr4 (80-195)||(11008936-11009052)
chr4 (127-275)||(22044781-22044931)
chr4 (89-274)||(31849952-31850138)
chr4 (127-272)||(22803125-22803270)
chr4 (1-75)||(11008880-11008954)
chr4 (1-75)||(9176784-9176858)
chr4 (1-54)||(11006551-11006604)
chr4 (127-187)||(22047076-22047135)
chr4 (89-278)||(48486109-48486299)
chr4 (1-54)||(9174456-9174509)
chr4 (89-188)||(5198300-5198400)
chr4 (136-188)||(9148140-9148192)
chr4 (350-392)||(41223651-41223693)
chr4 (1-54)||(3824883-3824936)
chr4 (1-54)||(24888766-24888819)
chr4 (1-54)||(37089684-37089737)
chr4 (1-54)||(47274697-47274750)
chr4 (350-391)||(48084779-48084820)
chr4 (354-392)||(41809882-41809920)
chr4 (125-170)||(619837-619882)
chr4 (1-54)||(5198390-5198443)
chr4 (1-54)||(5637779-5637832)
chr4 (229-274)||(8528918-8528963)
chr4 (1-54)||(11434925-11434978)
chr4 (104-181)||(16689303-16689380)
chr4 (1-54)||(22801172-22801225)
chr4 (1-54)||(22803044-22803097)
chr4 (1-54)||(24880421-24880474)
chr4 (1-54)||(36919897-36919950)
chr4 (1-54)||(38409169-38409222)
chr4 (1-54)||(48486289-48486342)
chr4 (105-177)||(4556422-4556494)
chr4 (134-178)||(40091814-40091858)
[»] chr8 (26 HSPs)
chr8 (1-275)||(43079346-43079611)
chr8 (1-275)||(43081721-43081983)
chr8 (58-275)||(18812667-18812883)
chr8 (58-274)||(18810483-18810698)
chr8 (80-275)||(44720616-44720812)
chr8 (89-276)||(27826780-27826968)
chr8 (89-275)||(27829092-27829279)
chr8 (127-270)||(14807552-14807695)
chr8 (127-274)||(12517418-12517565)
chr8 (4-75)||(44720794-44720865)
chr8 (89-277)||(15067774-15067963)
chr8 (165-253)||(3886330-3886419)
chr8 (89-275)||(15072505-15072692)
chr8 (136-188)||(28251988-28252040)
chr8 (302-390)||(29844286-29844375)
chr8 (309-370)||(27325113-27325174)
chr8 (296-392)||(2741905-2742000)
chr8 (1-75)||(18810659-18810733)
chr8 (1-75)||(18812844-18812918)
chr8 (311-371)||(15820137-15820197)
chr8 (353-388)||(22531293-22531328)
chr8 (353-388)||(22535978-22536013)
chr8 (353-388)||(25993899-25993934)
chr8 (350-392)||(34924731-34924773)
chr8 (1-54)||(14807723-14807776)
chr8 (1-54)||(28251877-28251930)
[»] chr1 (40 HSPs)
chr1 (1-274)||(23783238-23783520)
chr1 (80-275)||(47179427-47179622)
chr1 (80-275)||(16225886-16226080)
chr1 (80-275)||(47177077-47177271)
chr1 (277-451)||(35306691-35306865)
chr1 (89-275)||(13761576-13761763)
chr1 (89-275)||(51752103-51752291)
chr1 (89-274)||(51749778-51749965)
chr1 (89-275)||(20302197-20302385)
chr1 (89-254)||(6823643-6823810)
chr1 (157-277)||(6822772-6822893)
chr1 (89-275)||(10400183-10400370)
chr1 (157-247)||(16231368-16231458)
chr1 (89-274)||(28840418-28840604)
chr1 (1-75)||(16231496-16231570)
chr1 (127-275)||(28842232-28842380)
chr1 (1-75)||(47177253-47177327)
chr1 (1-75)||(47179604-47179678)
chr1 (134-274)||(15823286-15823426)
chr1 (1-75)||(16226062-16226136)
chr1 (169-274)||(20291280-20291386)
chr1 (294-418)||(7910902-7911027)
chr1 (282-401)||(23473787-23473907)
chr1 (80-132)||(16231462-16231514)
chr1 (104-181)||(13449919-13449996)
chr1 (89-187)||(30790749-30790848)
chr1 (89-241)||(13214854-13215007)
chr1 (89-167)||(28207421-28207500)
chr1 (353-388)||(30190811-30190846)
chr1 (302-390)||(50139554-50139643)
chr1 (302-388)||(50108993-50109082)
chr1 (1-54)||(13214997-13215050)
chr1 (1-54)||(13761753-13761806)
chr1 (1-54)||(15823462-15823515)
chr1 (242-275)||(16228235-16228268)
chr1 (1-54)||(28207378-28207431)
chr1 (1-54)||(28840594-28840647)
chr1 (1-54)||(41646836-41646889)
chr1 (1-54)||(51749955-51750008)
chr1 (1-54)||(51752281-51752334)
[»] scaffold0472 (2 HSPs)
scaffold0472 (86-274)||(5927-6115)
scaffold0472 (1-75)||(6103-6177)
[»] scaffold0127 (1 HSPs)
scaffold0127 (88-274)||(12868-13054)
[»] scaffold0025 (2 HSPs)
scaffold0025 (127-275)||(69686-69834)
scaffold0025 (157-275)||(73427-73545)
[»] scaffold0068 (3 HSPs)
scaffold0068 (86-183)||(29001-29099)
scaffold0068 (220-275)||(28940-28995)
scaffold0068 (1-54)||(29086-29139)
[»] scaffold0250 (1 HSPs)
scaffold0250 (89-275)||(2628-2815)
[»] scaffold0011 (1 HSPs)
scaffold0011 (309-387)||(9216-9294)
[»] scaffold0039 (1 HSPs)
scaffold0039 (350-392)||(57013-57055)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-54)||(3922-3975)
[»] scaffold0131 (2 HSPs)
scaffold0131 (89-273)||(14768-14954)
scaffold0131 (1-54)||(14944-14997)
[»] scaffold0097 (1 HSPs)
scaffold0097 (353-388)||(21430-21465)


Alignment Details
Target: chr6 (Bit Score: 258; Significance: 1e-143; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 29755006 - 29755279
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29755006 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgccttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 29755105  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29755106 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 29755205  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29755206 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 29755279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 33311227 - 33310953
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  33311227 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 33311128  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33311127 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 33311028  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33311027 acctccatcgtgccacgaagcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 33310953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 33308958 - 33308684
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  33308958 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaaatgtaacaaatctgct 33308859  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33308858 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 33308759  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33308758 acctccatcgtgccacgaagcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 33308684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 26068609 - 26068882
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26068609 tacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgctttaaatttgtaacaaatctgtaacaaaaacggtaacaaatctgct 26068708  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26068709 cccaaaaatacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 26068808  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    ||||||||| |||| ||  |||  ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26068809 acctccatcatgccacgttgccttgccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 26068882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 26066338 - 26066612
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26066338 tacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctactttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 26066437  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  26066438 cccaaaaatacgttttatttttatccgccagcgcaccattgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaataactaaa 26066537  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||||||| ||  |||  ||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  26066538 acctccatcgtgccacgttgccttgccgtcgtgccacgattctacagaaacctgattttaagttaactctcacaa 26066612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 129 - 274
Target Start/End: Original strand, 14507569 - 14507716
Alignment:
Q  129 cagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc--ccaaaaaactaaaacctccatcgtgccgcgaagcccagc 226  Q
    |||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||   | |||||||| |||||||||||||||| ||  |||||||    
T  14507569 cagcgcaccatcgtgccacgatgcgaccccatcgtgccaccatttttccagtgccttgtatcaaaaaaactgaaacctccatcgtgccacgttgcccagc 14507668  T
Q  227 cgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    | ||||||||||||| |||||||| |||||||||||||||||||||||    
T  14507669 catcgtgccacgattctgcagaaatctgattttaagttaactctcaca 14507716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 129 - 274
Target Start/End: Complemental strand, 8995400 - 8995255
Alignment:
Q  129 cagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagcc 227  Q
    |||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||  ||||||||    
T  8995400 cagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgccca-aaaactgaaacctccaatcgtgccacgttgcccagcc 8995302  T
Q  228 gtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcaca 274  Q
     |||||||||||||  | ||| | ||||||||||||||||||||||||    
T  8995301 atcgtgccacgattcctacag-atcctgattttaagttaactctcaca 8995255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 129 - 274
Target Start/End: Complemental strand, 9019847 - 9019702
Alignment:
Q  129 cagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagcc 227  Q
    |||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||  ||||||||    
T  9019847 cagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgccca-aaaactgaaacctccaatcgtgccacgttgcccagcc 9019749  T
Q  228 gtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcaca 274  Q
     |||||||||||||  | ||| | ||||||||||||||||||||||||    
T  9019748 atcgtgccacgattcctacag-atcctgattttaagttaactctcaca 9019702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 125 - 275
Target Start/End: Original strand, 19227799 - 19227949
Alignment:
Q  125 ccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagccca 224  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| | ||||||||||| |||| ||  |||||    
T  19227799 ccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaattgaaacctccatcatgccacgttgccca 19227898  T
Q  225 gccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 275  Q
     || |||||||||||||  ||||| | | | |||||||||||||||||||||    
T  19227899 accatcgtgccacgattcctgcag-atcttaattttaagttaactctcacaa 19227949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 89 - 275
Target Start/End: Original strand, 11983382 - 11983567
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||  |      
T  11983382 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgc--tta 11983479  T
Q  188 ccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    ||  | |||| ||||||||||||| ||  |  ||||| || |||| |||||||| |||||||||||||||||||||||||||| ||||    
T  11983480 cctcacaactgaaacctccatcgtaccatgttgcccaaccatcgtaccacgattctgcagaaacctgattttaagttaactcttacaa 11983567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 52 - 188
Target Start/End: Original strand, 4816584 - 4816720
Alignment:
Q  52 tgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatg 151  Q
    ||||| |||| |||||||||||||    |||| ||||||||||||||| || ||||||| ||||   ||||  |  ||||||||||||||||||||||||    
T  4816584 tgcttaaaatctgtaacaaatctgcttaaaaatctgtaacaaatctgcaccaaaaaatatgtttctgtttttgctaccagcacaccatcgtgccacgatg 4816683  T
Q  152 cgaccccatcctgccacgatttttccagtgccttgcc 188  Q
    |||||||||| |||||||||||||||||| |||||||    
T  4816684 cgaccccatcgtgccacgatttttccagtaccttgcc 4816720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 4816555 - 4816639
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctt-taaatttgtaacaaatctgtaacaaaaa 84  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||  |||| ||||||||||||| | ||||||    
T  4816555 tacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaaatctgtaacaaatctgcaccaaaaa 4816639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 20915668 - 20915736
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaaca 69  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| |||||||    
T  20915668 tacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgtaaca 20915736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 274
Target Start/End: Original strand, 15530514 - 15530661
Alignment:
Q  127 gccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccag 225  Q
    ||||||||||||||||||||||||||| ||||||| | |||||| ||||| ||||| ||| ||  |||  | |||||||| || ||||| ||   |||||    
T  15530514 gccagcacaccatcgtgccacgatgcggccccatcgtaccacgaattttcgagtgctttg-cctcaaacttgaaacctccaattgtgccacgttacccag 15530612  T
Q  226 ccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcaca 274  Q
    || |||||||||||||  ||||| | ||||||||||||||||||||||||    
T  15530613 ccatcgtgccacgattcctgcag-atcctgattttaagttaactctcaca 15530661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 26084895 - 26084818
Alignment:
Q  104 aaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtg 181  Q
    ||||||||||||||||||||||  | | | |||||||||||||||||||||  | ||| || ||||||||||||||||    
T  26084895 aaaaatacgttttatttttatcttcaatcgcaccatcgtgccacgatgcgattcaatcgtggcacgatttttccagtg 26084818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 388
Target Start/End: Original strand, 3639162 - 3639241
Alignment:
Q  309 atgatggaatctattccatcccataccaccatctttctctattttcattccccccaatttgggaggtatgcaatggaatg 388  Q
    ||||||||||| |||||||||||| ||| |||||| || |||||| ||||| |||||||||||  ||||  |||||||||    
T  3639162 atgatggaatccattccatcccattccatcatcttcctttatttttattcctcccaatttggggtgtatagaatggaatg 3639241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 392
Target Start/End: Original strand, 10871320 - 10871363
Alignment:
Q  349 attttcattccccccaatttgggaggtatgcaatggaatggaac 392  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  10871320 attttcattcccctcaatttgggatgtatgcaatggaatggaac 10871363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 274
Target Start/End: Original strand, 4816740 - 4816786
Alignment:
Q  229 tcgtgccacgattgtgcagaaa-cctgattttaagttaactctcaca 274  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  4816740 tcgtgccacgattctgcagaaaacctgattttaagttaactctcaca 4816786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 388
Target Start/End: Original strand, 33091236 - 33091271
Alignment:
Q  353 tcattccccccaatttgggaggtatgcaatggaatg 388  Q
    ||||||||||||||||||||||||| ||||||||||    
T  33091236 tcattccccccaatttgggaggtatccaatggaatg 33091271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 392
Target Start/End: Complemental strand, 19694592 - 19694550
Alignment:
Q  350 ttttcattccccccaatttgggaggtatgcaatggaatggaac 392  Q
    ||||||||||||||||||||||  | |||||||||||||||||    
T  19694592 ttttcattccccccaatttggggtgcatgcaatggaatggaac 19694550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1072187 - 1072240
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    ||||| |||||||||||||||||||||  |||||||||| |  |||||||||||    
T  1072187 tacaatgtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgc 1072240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30729138 - 30729191
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||| |||||||||||||||||||| | ||||||||| |  |||||||||||    
T  30729138 tacaagatctatatttatagtaaaagtaccgcttaaaatttggaacaaatctgc 30729191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 274
Target Start/End: Original strand, 1072312 - 1072395
Alignment:
Q  192 aaaactaaaacctcca-tcgtgccgcgaagcccagccgtcgtgccacgattg-tgcagaaacctgattttaagttaactctcaca 274  Q
    |||||| ||||||||| ||||||| ||  ||||| || |||| ||||||||  ||||||| ||||||||||||||||||||||||    
T  1072312 aaaacttaaacctccaatcgtgccacgttgcccaaccatcgtaccacgatttctgcagaa-cctgattttaagttaactctcaca 1072395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 255; Significance: 1e-142; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 22188 - 21910
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  22188 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 22089  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22088 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 21989  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaaaatt 279  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21988 acctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaaaatt 21910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 24463 - 24189
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  24463 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 24364  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24363 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 24264  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24263 acctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 24189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 36559085 - 36559359
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  36559085 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 36559184  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36559185 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 36559284  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36559285 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 36559359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 45332402 - 45332675
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaa-tctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgc 99  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||| | |||| ||||||||||||||||||||| |||||||||||||||    
T  45332402 tacaaggtctatatttatagtaaaagttctgcttaaaaatctataacaaatctgcctaaaatctgtaacaaatctgtaacaaaa-ctgtaacaaatctgc 45332500  T
Q  100 tcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaa 199  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  45332501 tcccaaaaatacgttttatttttatccgccagcgcaccatcgtgccacgatgtgaccccatcgttccacgatttttccagttccttgcccaaaaaactaa 45332600  T
Q  200 aacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  45332601 aacctccatcgtgccgcgaagcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 45332675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 36561362 - 36561677
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  36561362 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 36561461  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccat------------------------------------------cgtgccacgatgcgacccc 158  Q
    |||||||||| ||||||||||||||||||||| ||||||                                          |||||||||||||||||||    
T  36561462 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatgcgaccccatcgtgccacgatgcgacccc 36561561  T
Q  159 atcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattt 258  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36561562 atcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgtgaagcccagccgtcgtgccacgattgtgcagaaacctgattt 36561661  T
Q  259 taagttaactctcaca 274  Q
    ||||||||||||||||    
T  36561662 taagttaactctcaca 36561677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 126 - 275
Target Start/End: Original strand, 19502402 - 19502551
Alignment:
Q  126 cgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccag 225  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||  |||  |    
T  19502402 cgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctccatcgtgccacgttgccttg 19502501  T
Q  226 ccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    || ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  19502502 ccatcgtgccacgattctgcagaaacctgattttaagttaactatcacaa 19502551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 89 - 276
Target Start/End: Original strand, 24162565 - 24162754
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||| || | ||  | |||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24162565 aacaaatctgcacccaaaaatacgtttctaatattcgcagccagcgcacaatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 24162664  T
Q  188 c-caaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaaa 276  Q
    | ||||||||| |||||||||||||||| ||  ||||| || | ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  24162665 ctcaaaaaactgaaacctccatcgtgccacgttgcccaaccattgtgccacgattctgcagaaacttgattttaagttaactctcacaaa 24162754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 126 - 274
Target Start/End: Original strand, 19504736 - 19504884
Alignment:
Q  126 cgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccag 225  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||| ||  |||  |    
T  19504736 cgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaattaaaacctccatcgtgccacgttgccttg 19504835  T
Q  226 ccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    || |||||||| |||| ||| |||||||||||||||||||||| |||||    
T  19504836 ccatcgtgccatgattctgctgaaacctgattttaagttaactttcaca 19504884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 89 - 277
Target Start/End: Complemental strand, 27104701 - 27104512
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  27104701 aacaaatctgcactcaaaaatatgtttatgtttttccctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgccttgc 27104602  T
Q  188 ccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaaaa 277  Q
    |  ||||||| |||||||||||||||| ||  ||||  |  ||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  27104601 ctcaaaaactgaaacctccatcgtgccacgttgcccttcaatcgtgccacgattctgcagaaatctgattttaagttaactcttacaaaa 27104512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 275
Target Start/End: Original strand, 21521048 - 21521235
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||| | || ||  | |||||| ||||||||||||||| ||||| |||||| || |||||||||||||||| ||||     
T  21521048 aacaaatctgcacccaaaaatacgtttatgttattcgctgccagcgcaccatcgtgccacgttgcgatcccatcgtggcacgatttttccagtggcttg- 21521146  T
Q  188 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 275  Q
    |   |||||| |||||||| |||||||| ||  |||||||| |||||||||||||  || || |||||||||||||||||||||||||||    
T  21521147 cttcaaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacgattcctgtag-aacctgattttaagttaactctcacaa 21521235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 43623968 - 43624086
Alignment:
Q  157 ccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctga 255  Q
    ||||| ||||||||||||| ||||||||||||  |||| || ||||||||| |||||||  |  |||||||| |||||||| |||| |||||||||||||    
T  43623968 ccatcgtgccacgattttttcagtgccttgcctcaaaa-ctgaaacctccaatcgtgccatgttgcccagccatcgtgccatgattctgcagaaacctga 43624066  T
Q  256 ttttaagttaactctcacaa 275  Q
    ||||||||||||| ||||||    
T  43624067 ttttaagttaactttcacaa 43624086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 13910397 - 13910491
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgc 182  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  13910397 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacaatgcgaccccatcgtgccacgatttttccagtgc 13910491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 89 - 271
Target Start/End: Original strand, 6259168 - 6259351
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||| ||||| |||||||||| |||| | || ||  |||||||| |||||||||| |||| ||||| |||||| ||||||||||||||||||| |||      
T  6259168 aacaagtctgcacccaaaaatatgtttctgttattcaccgccagcgcaccatcgtgtcacgttgcgatcccatcgtgccacgatttttccagtgactt-t 6259266  T
Q  188 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacga-ttgtgcagaaacctgattttaagttaactctc 271  Q
    ||  |||||| |||| ||| || ||||| ||  || ||||| ||||||||||| || ||||| |||||||||||||||||||||||    
T  6259267 cctcaaaactgaaacatccaatagtgccacgttgcacagccatcgtgccacgatttctgcag-aacctgattttaagttaactctc 6259351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 42064378 - 42064317
Alignment:
Q  127 gccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcc 188  Q
    |||||| |||||||||||||||||| || |||||| |||||||||||||||||||| |||||    
T  42064378 gccagcgcaccatcgtgccacgatgtgatcccatcgtgccacgatttttccagtgctttgcc 42064317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 388
Target Start/End: Complemental strand, 38022999 - 38022920
Alignment:
Q  309 atgatggaatctattccatcccataccaccatctttctctattttcattccccccaatttgggaggtatgcaatggaatg 388  Q
    ||||||||||| |||||||||||| ||| |||||| || |||||||||||| |||||||||||  ||||  |||||||||    
T  38022999 atgatggaatccattccatcccattccatcatcttcctttattttcattcctcccaatttggggtgtatagaatggaatg 38022920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 275
Target Start/End: Original strand, 40032503 - 40032587
Alignment:
Q  192 aaaactaaaacctcca-tcgtgccgcgaagcccagccgtcgtgccacgattg-tgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||| ||||||||| ||||||| ||  |||||||| |||||||||||||  ||||||| |||||||||||||||||||||||||    
T  40032503 aaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacgatttctgcagaa-cctgattttaagttaactctcacaa 40032587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22407719 - 22407772
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||  |||||||||| |  |||||||||||    
T  22407719 tacaaggtctatatttatagtaaaagtattgcttaaaattttgaacaaatctgc 22407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 388
Target Start/End: Complemental strand, 20717628 - 20717593
Alignment:
Q  353 tcattccccccaatttgggaggtatgcaatggaatg 388  Q
    ||||||||||||||||||||||||| ||||||||||    
T  20717628 tcattccccccaatttgggaggtatccaatggaatg 20717593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24162522 - 24162575
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  24162522 tacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgc 24162575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27104744 - 27104691
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  27104744 tacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 27104691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 395
Target Start/End: Original strand, 28219115 - 28219160
Alignment:
Q  350 ttttcattccccccaatttgggaggtatgcaatggaatggaaccac 395  Q
    |||||||||| |||||||||||  |||| |||||||||||||||||    
T  28219115 ttttcattccacccaatttggggtgtatccaatggaatggaaccac 28219160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42064460 - 42064407
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  42064460 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 42064407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43623878 - 43623931
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||| ||||||||||||||  |||||||||| |  |||||||||||    
T  43623878 tacaaggtctatttttatagtaaaagtattgcttaaaatttggaacaaatctgc 43623931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 9027414 - 9027687
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  9027414 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 9027513  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9027514 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 9027613  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9027614 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 9027687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 22137151 - 22136877
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  22137151 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 22137052  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22137051 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 22136952  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22136951 acctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 22136877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 40552178 - 40551904
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  40552178 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 40552079  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40552078 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 40551979  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40551978 acctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 40551904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 22108140 - 22107866
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  22108140 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 22108041  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22108040 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 22107941  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22107940 acctgcatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 22107866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 40549900 - 40549626
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  40549900 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 40549801  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40549800 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 40549701  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40549700 acctgcatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 40549626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 2935332 - 2935070
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||           ||||||||||||||||||||||||||||    
T  2935332 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaat-----------ctgtaacaaaaactgtaacaaatctgct 2935244  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    | |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2935243 ctcaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 2935144  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2935143 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 2935070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 1047242 - 1047504
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||            |||||||||||||||||    
T  1047242 tacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa------------actgtaacaaatctgct 1047329  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1047330 cccaaaaatacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 1047429  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1047430 acctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 1047504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 40837144 - 40837261
Alignment:
Q  157 ccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgat 256  Q
    ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||  | ||  || ||||||||||||| ||||||||||||||    
T  40837144 ccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctccatcgtgccacgttgtccgaccatcgtgccacgattctgcagaaacctgat 40837243  T
Q  257 tttaagttaactctcaca 274  Q
    ||||||||||||||||||    
T  40837244 tttaagttaactctcaca 40837261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 135 - 274
Target Start/End: Complemental strand, 3878461 - 3878322
Alignment:
Q  135 accatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtg 233  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||  | |||||||| |||||||| ||  |||||||| |||||    
T  3878461 accatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaatcgtgccacgttgcccagccatcgtg 3878363  T
Q  234 ccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    |||||||| |||||||| |||||||||||||||||||||||    
T  3878362 ccacgattctgcagaaatctgattttaagttaactctcaca 3878322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 89 - 274
Target Start/End: Original strand, 27306582 - 27306767
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||| | || ||  | || ||| |||||||||||||||| ||||||||||| |||||||||||||||| || ||||     
T  27306582 aacaaatctgcacccaaaaatacgtttctgttattcgctgctagcgcaccatcgtgccacgaagcgaccccatcgtgccacgatttttccaatgacttg- 27306680  T
Q  188 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    ||  |||||| |||||||| |||||||| ||  | |||||| ||||||||||||| |||| |||||| ||||||||||||||||||||    
T  27306681 cctcaaaactgaaacctccaatcgtgccacgttgtccagccatcgtgccacgattttgca-aaaccttattttaagttaactctcaca 27306767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 26804462 - 26804342
Alignment:
Q  157 ccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctga 255  Q
    ||||| |||||||||||||||| |||||||||  |||| || ||||||||| |||| || ||  |||||||| ||||||||||||| || ||||||||||    
T  26804462 ccatcgtgccacgatttttccactgccttgcctcaaaa-ctgaaacctccaatcgtaccacgttgcccagccatcgtgccacgattctgtagaaacctga 26804364  T
Q  256 ttttaagttaactctcacaaaa 277  Q
    ||||||||||||||||||||||    
T  26804363 ttttaagttaactctcacaaaa 26804342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 274
Target Start/End: Complemental strand, 25542427 - 25542281
Alignment:
Q  127 gccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccag 225  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||||| ||||||||| ||  |||||| |||||||| |||||||| ||  ||||||    
T  25542427 gccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccag 25542329  T
Q  226 ccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    |  |||||||||  |  ||||| | | ||||||||||||||||||||||    
T  25542328 caatcgtgccacattcctgcag-atcttgattttaagttaactctcaca 25542281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 44499 - 44401
Alignment:
Q  90 acaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    |||||||||| |||||||||| |||| | || ||  | |||||| |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||    
T  44499 acaaatctgcacccaaaaatatgtttatgttatttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccatgatttttccagtgctttgc 44401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 35565 - 35378
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||| |  | ||  | |||||| ||| |||| ||||||||||||||||||| |||||||||||||||||||| |||     
T  35565 aacaaatctgcacccaaaaatacgtttctgctatttgctgccagcgcacgatcgggccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 35467  T
Q  188 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 275  Q
    ||  |||  | |||||||| |||||||| ||  ||| |||  |||||||||||||  ||||| | | |||||||||||||||||||||||    
T  35466 cctcaaacttgaaacctccaatcgtgccacgttgcctagcaatcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 35378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35608 - 35555
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  35608 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 35555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1049605 - 1049658
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  1049605 tacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 1049658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 274
Target Start/End: Complemental strand, 18567510 - 18567363
Alignment:
Q  127 gccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccag 225  Q
    |||||| ||||||||||||| | || ||||||||| ||||||||    ||||||| |||| ||  |||||| |||||||| |||||||| |   ||||||    
T  18567510 gccagcgcaccatcgtgccaagttgtgaccccatcgtgccacgaaaaatccagtgacttg-cctcaaaactgaaacctccaatcgtgccactttgcccag 18567412  T
Q  226 ccgtcgtgccacga-ttgtgcagaaacctgattttaagttaactctcaca 274  Q
    |  ||||||||||| || || || ||||||||||||||| ||||||||||    
T  18567411 ctatcgtgccacgatttctgtag-aacctgattttaagtcaactctcaca 18567363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27306539 - 27306592
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  27306539 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 27306592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 274
Target Start/End: Original strand, 31435439 - 31435586
Alignment:
Q  127 gccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccag 225  Q
    |||||| ||||||||||||| | || ||||||||| ||||||||    ||||||| |||| ||  |||||| |||||||| |||||||| |   ||||||    
T  31435439 gccagcgcaccatcgtgccaagttgtgaccccatcgtgccacgaaaaatccagtgacttg-cctcaaaactgaaacctccaatcgtgccactttgcccag 31435537  T
Q  226 ccgtcgtgccacga-ttgtgcagaaacctgattttaagttaactctcaca 274  Q
    |  ||||||||||| || || || ||||||||||||||| ||||||||||    
T  31435538 ctatcgtgccacgatttctgtag-aacctgattttaagtcaactctcaca 31435586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 40946244 - 40946167
Alignment:
Q  104 aaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtg 181  Q
    ||||||| ||||||||||||||  | | | |||||||||| |||||| ||| || ||| || ||||||||||||||||    
T  40946244 aaaaatatgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcgtgacacgatttttccagtg 40946167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 26804551 - 26804499
Alignment:
Q  2 acaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    ||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  26804551 acaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 26804499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 15357068 - 15357343
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  15357068 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 15357167  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15357168 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 15357267  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaaa 276  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15357268 acctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaaa 15357343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 15354792 - 15355066
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  15354792 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 15354891  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15354892 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 15354991  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15354992 acctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 15355066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 10757233 - 10756959
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||    
T  10757233 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatttgtaacaaaaactgtaacaaatctgct 10757134  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10757133 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 10757034  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10757033 acctccatcgtgccgcgaagcccagccgtcgtgctacgattgtgcagaaacctgattttaagttaactctcacaa 10756959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 23665107 - 23664834
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  23665107 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 23665008  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| ||||    
T  23665007 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgcctttcccaaaaaaataaa 23664908  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23664907 aactccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 23664834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 23793480 - 23793753
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  23793480 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 23793579  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| ||||    
T  23793580 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgcctttcccaaaaaaataaa 23793679  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23793680 aactccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 23793753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 23667382 - 23667108
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  23667382 tacaaggtctatatttatagttaaagtcatgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 23667283  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| ||||    
T  23667282 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgcctttcccaaaaaaataaa 23667183  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23667182 aactccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 23667108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 51 - 274
Target Start/End: Complemental strand, 10749728 - 10749505
Alignment:
Q  51 ctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgat 150  Q
    |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  10749728 ctgcttaaaatctataacaaatctgtaacaaaaactgtaacaaatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgat 10749629  T
Q  151 gcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaa 250  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10749628 gcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaa 10749529  T
Q  251 cctgattttaagttaactctcaca 274  Q
    ||||||||||||||||||||||||    
T  10749528 cctgattttaagttaactctcaca 10749505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 31179681 - 31179894
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31179681 tacaatgtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 31179780  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  31179781 cccaaaaatacgttttatttttacccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgtcttgcccaaaaaactaaa 31179880  T
Q  201 acctccatcgtgcc 214  Q
    ||||||||||||||    
T  31179881 acctccatcgtgcc 31179894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 38960352 - 38960605
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  38960352 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 38960451  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||||                     ||||||||||||||||||||||||||||||||    
T  38960452 cccaaaaatatgttttatttttatccgccaacgcaccatcgtgccac---------------------gatttttccagtgccttgcccaaaaaactaaa 38960530  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38960531 acctccatcgtgccgcaaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 38960605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 53 - 275
Target Start/End: Original strand, 34477412 - 34477633
Alignment:
Q  53 gctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgc 152  Q
    |||| |||| |||||||||||||   ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  34477412 gcttaaaatctgtaacaaatctgct-caaaatctgtaacaaatctgcacccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgc 34477510  T
Q  153 gaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacc 252  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||  |||||||| ||||||||||||| |||||||||     
T  34477511 gaccccatcgtgccacgatttttccagtgccttgcctaaaaaactaaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaact 34477610  T
Q  253 tgattttaagttaactctcacaa 275  Q
    |||||||||||||||||||||||    
T  34477611 tgattttaagttaactctcacaa 34477633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 31542704 - 31542442
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| ||||||||||||||||||||            |||||     
T  31542704 tacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaatctgtaacaaa------------tctgca 31542617  T
Q  101 cccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaa 199  Q
    |||||||||| |||| | ||||||||||||||| |||||||||| | ||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  31542616 cccaaaaatatgtttctgtttttatccgccagcgcaccatcgtgtctcgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaa 31542517  T
Q  200 aacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    ||||||||||||||| ||  |||||||  ||||| ||||||| ||||||||||||||||||||||||||||||||    
T  31542516 aacctccatcgtgccacgttgcccagctatcgtgtcacgattttgcagaaacctgattttaagttaactctcaca 31542442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 277 - 451
Target Start/End: Complemental strand, 16597783 - 16597610
Alignment:
Q  277 atttctaaaaattggacggaatagcatggaacatgatggaatctattccatcccataccaccatctttctctattttcattccccccaatttgggaggta 376  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16597783 atttataaaaattggatggaatggcatggaacatgatggaatctattctatcccataccaccatctttctctattttcattccccccaatttaggaggta 16597684  T
Q  377 tgcaatggaatggaaccacttaattctattattactcttttatccnnnnnnnnattacttcatcactgtactgat 451  Q
    |||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||    
T  16597683 tgcaatggaatggaaccacttaattctattattactcttttatcc-tttttttattacttcatcactgtactgat 16597610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 80 - 275
Target Start/End: Complemental strand, 31544993 - 31544797
Alignment:
Q  80 aaaaactgtaacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttcca 178  Q
    |||| |||||| |||||||| |||||||||| |||| | ||||||||||||||| |||||||||| | ||||| ||||||||| ||||||||||||||||    
T  31544993 aaaatctgtaataaatctgcacccaaaaatatgtttctgtttttatccgccagcgcaccatcgtgtctcgatgagaccccatcgtgccacgatttttcca 31544894  T
Q  179 gtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||  ||||||||||||| |||||||||||||||||||||||||||||||||    
T  31544893 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagctatcgtgccacgattttgcagaaacctgattttaagttaactctcacaa 31544797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 89 - 274
Target Start/End: Complemental strand, 38882031 - 38881845
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||| | || ||  |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38882031 aacaaatctgcacccaaaaatacgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 38881932  T
Q  188 ccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcaca 274  Q
    |  |||||||||||||||||||||||| ||  |||||||  |||||||||||||  ||||| | | ||||||||||||||||||||||    
T  38881931 ctcaaaaactaaaacctccatcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 38881845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 23742076 - 23742256
Alignment:
Q  2 acaaggtctatatttatagtaaaagtcctgctt-aaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||| | |||||||||||||||||||||||||| ||||||| ||||||||    
T  23742076 acaaggtctatatttatagtaaaagtcctgctttaaaacctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaatctgtaactaatctgct 23742175  T
Q  101 ccc-aaaaatacgttttatttttat-ccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccag 179  Q
    ||| ||||||  ||||||||||||| ||||||  | ||||| ||||||||||| || || ||| |||||||| ||||||||    
T  23742176 cccaaaaaatttgttttatttttatcccgccaagataccattgtgccacgatgtgatcctatcgtgccacgaattttccag 23742256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 157 - 276
Target Start/End: Original strand, 34479855 - 34479974
Alignment:
Q  157 ccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgat 256  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||  |||||||| ||||||||||||| ||||||||||||||    
T  34479855 ccatcgtgccacgatttttccagtgccttgcctaaaaaactaaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacctgat 34479954  T
Q  257 tttaagttaactctcacaaa 276  Q
    ||||||||||||||||||||    
T  34479955 tttaagttaactctcacaaa 34479974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 2174797 - 2174680
Alignment:
Q  157 ccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgat 256  Q
    ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||  |||  ||| ||||||||||||| ||||||||||||||    
T  2174797 ccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgat 2174698  T
Q  257 tttaagttaactctcaca 274  Q
    ||||||||||||||||||    
T  2174697 tttaagttaactctcaca 2174680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 25921874 - 25921992
Alignment:
Q  157 ccatcctgccacgatttttccagtgccttgcc-caaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctga 255  Q
    ||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||  | ||| || ||||||||||||| |||||||||||||    
T  25921874 ccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctccatcgtgccacgttgtccaaccatcgtgccacgattctgcagaaacctga 25921973  T
Q  256 ttttaagttaactctcaca 274  Q
    |||||||||||||||||||    
T  25921974 ttttaagttaactctcaca 25921992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 4236517 - 4236374
Alignment:
Q  127 gccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccag 225  Q
    |||||| ||||||||||||||||||||| |||||  |||||||||||||||||||||||| ||  |||||| |||||||| |||||||| ||  ||||||    
T  4236517 gccagcgcaccatcgtgccacgatgcgatcccattgtgccacgatttttccagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccag 4236419  T
Q  226 ccgtcgtgccacgattgtgcagaaacctgattttaagttaactct 270  Q
    || ||||||||| ||| |||||||| |||||||||||||||||||    
T  4236418 ccatcgtgccacaattctgcagaaatctgattttaagttaactct 4236374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 39797966 - 39797849
Alignment:
Q  157 ccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgat 256  Q
    ||||| ||||| ||||||||| ||||||||||  ||||||| ||||||||||| |||| ||  |||||||| ||||||||||||| ||||||||||||||    
T  39797966 ccatcgtgccatgatttttccggtgccttgcctcaaaaactgaaacctccatcatgccacgttgcccagccatcgtgccacgattatgcagaaacctgat 39797867  T
Q  257 tttaagttaactctcaca 274  Q
    ||||||||||||||||||    
T  39797866 tttaagttaactctcaca 39797849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 34479773 - 34479869
Alignment:
Q  53 gctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgat 150  Q
    |||| |||| |||||||||||||   ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  34479773 gcttaaaatctgtaacaaatctgct-caaaatctgtaacaaatctgcacccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgat 34479869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 86 - 183
Target Start/End: Original strand, 21684811 - 21684909
Alignment:
Q  86 tgtaacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgcc 183  Q
    |||||||||||||| | |||||||| |||| | |||||  | |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21684811 tgtaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 21684909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 31545049 - 31544975
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| ||||| |||||||    
T  31545049 tacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgtaataaatctg 31544975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10749756 - 10749704
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctg 53  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10749756 tacaaggtctatatttatactaaaagtcctgcttaaaatctataacaaatctg 10749704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 21684915 - 21684970
Alignment:
Q  220 gcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  21684915 gcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 21684970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 34477382 - 34477456
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    |||||||||||| |||||||||||||||  ||||||||||| |||||||||||||  |||| |||||||||||||    
T  34477382 tacaaggtctatttttatagtaaaagtctcgcttaaaatctgtaacaaatctgctcaaaatctgtaacaaatctg 34477456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 16776044 - 16775983
Alignment:
Q  127 gccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcc 188  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  16776044 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgctttgcc 16775983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 31179888 - 31179936
Alignment:
Q  229 tcgtgccacgattgtgcagaaacctgattttaagttaactctcacaaaa 277  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31179888 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaaaa 31179936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 192 - 274
Target Start/End: Original strand, 18186504 - 18186587
Alignment:
Q  192 aaaactaaaacctcca-tcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    |||||| ||||||||| ||||||| ||  |||||||| |||| |||||||| ||||||||| ||||||||||||||||||||||    
T  18186504 aaaactgaaacctccaatcgtgccacgttgcccagccatcgtaccacgattctgcagaaacttgattttaagttaactctcaca 18186587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 34479743 - 34479817
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    |||||||||||| ||||||||||| |||  ||||||||||| |||||||||||||  |||| |||||||||||||    
T  34479743 tacaaggtctatttttatagtaaaggtctcgcttaaaatctgtaacaaatctgctcaaaatctgtaacaaatctg 34479817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 275
Target Start/End: Complemental strand, 659829 - 659712
Alignment:
Q  157 ccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccgcgaagcccagccgtcgtgccacgattg-tgcagaaacctg 254  Q
    ||||| ||||||||||||||||||| ||||||  |||  || ||||||||| ||||||| ||  ||| |||| |||||||||||||  ||||||| ||||    
T  659829 ccatcgtgccacgatttttccagtgacttgcctcaaa--ctgaaacctccaatcgtgccacgttgcctagccatcgtgccacgatttctgcagaa-cctg 659733  T
Q  255 attttaagttaactctcacaa 275  Q
    |||||||||||||||||||||    
T  659732 attttaagttaactctcacaa 659712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 388
Target Start/End: Original strand, 8961701 - 8961780
Alignment:
Q  309 atgatggaatctattccatcccataccaccatctttctctattttcattccccccaatttgggaggtatgcaatggaatg 388  Q
    ||||||||||| |||||||||||| ||| |||||| || |||||||||||| |||||||||||  ||||  |||||||||    
T  8961701 atgatggaatccattccatcccattccatcatcttcctttattttcattcctcccaatttggggtgtatagaatggaatg 8961780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 388
Target Start/End: Original strand, 30699571 - 30699650
Alignment:
Q  309 atgatggaatctattccatcccataccaccatctttctctattttcattccccccaatttgggaggtatgcaatggaatg 388  Q
    ||||||||||| |||||||||||| ||| |||||| || |||||||||||| |||||||||||  ||||  |||||||||    
T  30699571 atgatggaatccattccatcccattccatcatcttcctttattttcattcctcccaatttggggtgtatagaatggaatg 30699650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 4409967 - 4409890
Alignment:
Q  104 aaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtg 181  Q
    |||||||||||||||||||||| |||| | |||||||||| |||||| ||| || ||  || ||||||||||||||||    
T  4409967 aaaaatacgttttatttttatctgccatcgcaccatcgtggcacgattcgatccaattgtggcacgatttttccagtg 4409890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 275
Target Start/End: Original strand, 20504369 - 20504453
Alignment:
Q  192 aaaactaaaacctcca-tcgtgccgcgaagcccagccgtcgtgccacgattg-tgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||||||||| ||||||| ||  |||||||  |||||||||||||  ||||||| |||||||||||||||||||||||||    
T  20504369 aaaactaaaacctccaatcgtgccacgttgcccagctatcgtgccacgatttctgcagaa-cctgattttaagttaactctcacaa 20504453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21684771 - 21684824
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||  |||||||||| | ||||||||||||    
T  21684771 tacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgc 21684824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 36402791 - 36402846
Alignment:
Q  220 gcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||| |||||||  |||| ||||||||||| |||||||||||||||||||||    
T  36402791 gcccagccatcgtgcctagattctgcagaaacctaattttaagttaactctcacaa 36402846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 659850 - 659899
Alignment:
Q  139 tcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcc 188  Q
    ||||||||| |||||||| |||| ||||||||||||||||||| ||||||    
T  659850 tcgtgccacaatgcgacctcatcgtgccacgatttttccagtgacttgcc 659899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39798057 - 39798004
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||  |||||||||| |  |||||||||||    
T  39798057 tacaaggtctatatttatagtaaaagttttgcttaaaatttggaacaaatctgc 39798004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 39854394 - 39854317
Alignment:
Q  104 aaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtg 181  Q
    ||||||||||||||||||||||  | | | |||||||||||||||||||||  | | | || ||||||||||||||||    
T  39854394 aaaaatacgttttatttttatcttcaatcgcaccatcgtgccacgatgcgattcaaccgtgacacgatttttccagtg 39854317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 388
Target Start/End: Complemental strand, 13191759 - 13191724
Alignment:
Q  353 tcattccccccaatttgggaggtatgcaatggaatg 388  Q
    ||||||||||||||||||||||||| ||||||||||    
T  13191759 tcattccccccaatttgggaggtatccaatggaatg 13191724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2818646 - 2818699
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  2818646 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 2818699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4236598 - 4236545
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  4236598 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 4236545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 6744971 - 6744894
Alignment:
Q  104 aaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtg 181  Q
    ||||||||||||||||||||||  | | | |||||||||  |||||| ||| || ||| || ||||||||||||||||    
T  6744971 aaaaatacgttttatttttatcttcaatcgcaccatcgtagcacgattcgatccaatcgtggcacgatttttccagtg 6744894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 6747214 - 6747137
Alignment:
Q  104 aaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtg 181  Q
    ||||||||||||||||||||||  | | | |||||||||| |||||| ||| || ||| || ||||| ||||||||||    
T  6747214 aaaaatacgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcgtggcacgacttttccagtg 6747137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 275
Target Start/End: Complemental strand, 21947853 - 21947769
Alignment:
Q  192 aaaactaaaacctcca-tcgtgccgcgaagcccagccgtcgtgccacgattg-tgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||| ||||||||| ||||| | ||  ||| |||| |||||||||||||  ||||||| |||||||||||||||||||||||||    
T  21947853 aaaactgaaacctccaatcgtgtcacgttgcctagccatcgtgccacgatttctgcagaa-cctgattttaagttaactctcacaa 21947769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21947996 - 21947943
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  21947996 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 21947943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25921783 - 25921836
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  25921783 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 25921836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31466288 - 31466341
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  31466288 tacaaggtctatatttatagtaaaagtgtcgcttaaaatttggaacaaatctgc 31466341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38882074 - 38882021
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  38882074 tacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 38882021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 274
Target Start/End: Original strand, 20507918 - 20508001
Alignment:
Q  192 aaaactaaaacctcca-tcgtgccgcgaagcccagccgtcgtgccacgattg-tgcagaaacctgattttaagttaactctcaca 274  Q
    |||||||||||||||| ||||||  ||  ||||| |  |||||||||||||  ||||||| ||||||||||||||||||||||||    
T  20507918 aaaactaaaacctccaatcgtgctacgttgcccaactatcgtgccacgatttctgcagaa-cctgattttaagttaactctcaca 20508001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 42238123 - 42238047
Alignment:
Q  105 aaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtg 181  Q
    ||||||||||||  |||||||| | | | ||||||||||||||| |||||   |||| || ||||||||||||||||    
T  42238123 aaaatacgtttttgttttatcctcaatcgcaccatcgtgccacgttgcgatttcatcgtggcacgatttttccagtg 42238047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 206; Significance: 1e-112; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 50493948 - 50493676
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||| |||||||||| |||||||||| ||||||||||||||||    
T  50493948 tacaaggtctatatttatagtgaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaatttgtaacaaaa-ctgtaacaaatctgct 50493850  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  50493849 cccaaaaatacgttttatttttatccgccagcgcaccatcgtgccacgatgagactccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 50493750  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    |||||||||||||| ||  |||||||  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  50493749 acctccatcgtgccacgttgcccagctatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 50493676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 52 - 275
Target Start/End: Complemental strand, 38210288 - 38210066
Alignment:
Q  52 tgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatg 151  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  38210288 tgcttaaaatctgtaacaaatctgtaacaaaa-ctgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcgcactatcgtgccacgatg 38210190  T
Q  152 cgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaac 251  Q
     ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||||    
T  38210189 agaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaac 38210090  T
Q  252 ctgattttaagttaactctcacaa 275  Q
    ||||||||||||||||||||||||    
T  38210089 ctgattttaagttaactctcacaa 38210066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 51 - 274
Target Start/End: Original strand, 53896532 - 53896754
Alignment:
Q  51 ctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgat 150  Q
    |||||| |||| |||||||||||||    |||| |||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  53896532 ctgcttaaaatctgtaacaaatctgctt-aaaatctgtaacaaatctgctcccaaaaatacgttttatttttatccgcaagagcaccatcgtgccacgat 53896630  T
Q  151 gcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaa 250  Q
    | ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||  |||||||  ||||||||||||| ||||||||    
T  53896631 gagaccccatcgtgccacgatttttccagtaccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagcaatcgtgccacgattctgcagaaa 53896730  T
Q  251 cctgattttaagttaactctcaca 274  Q
    ||||||||||||||||||||||||    
T  53896731 cctgattttaagttaactctcaca 53896754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 80 - 275
Target Start/End: Original strand, 6063812 - 6064007
Alignment:
Q  80 aaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccag 179  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||    
T  6063812 aaaatctgtaacaaatctgcacccaaaaatatgttttatttttatccgccagtccaccatcgtgccacgatgcgaccccatcgtgccacgattttttcag 6063911  T
Q  180 tgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    ||||||||||||||||||||||||||||| ||||| ||  |||  ||| ||||||||||||| |||| ||||||||||||||||||| ||||||||    
T  6063912 tgccttgcccaaaaaactaaaacctccattgtgccacgttgccttgccatcgtgccacgattctgcataaacctgattttaagttaattctcacaa 6064007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 277 - 451
Target Start/End: Complemental strand, 35231921 - 35231747
Alignment:
Q  277 atttctaaaaattggacggaatagcatggaacatgatggaatctattccatcccataccaccatctttctctatttt-cattccccccaatttgggaggt 375  Q
    |||||||||||||||| ||||| | |||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35231921 atttctaaaaattggatggaatggtatggaacatgatggaatccattccattccataccaccatctttctctatttttcattccccccaatttgggaggt 35231822  T
Q  376 atgcaatggaatggaaccacttaattctattattactcttttatccnnnnnnnnattacttcatcactgtactgat 451  Q
    |||||||||||| |||||||||||||||||||||||||||||||||        ||||||||||||||||||||||    
T  35231821 atgcaatggaatagaaccacttaattctattattactcttttatcc-ctattttattacttcatcactgtactgat 35231747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 80 - 275
Target Start/End: Complemental strand, 5899653 - 5899456
Alignment:
Q  80 aaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccag 179  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||| |||||||||||    
T  5899653 aaaatctgtaacaaatctgtacccaaaaatacgttttatttttatctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccatgatttttccag 5899554  T
Q  180 tgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgatttta--agttaactctcacaa 275  Q
    ||||||||| ||||||||||||| ||||||||||| ||  ||||  |  |||||||| |||| ||||||||||||||| ||  |||||||||||||||    
T  5899553 tgccttgcctaaaaaactaaaacatccatcgtgccacgttgcccttcaatcgtgccatgattatgcagaaacctgattataagagttaactctcacaa 5899456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 80 - 214
Target Start/End: Complemental strand, 25388791 - 25388657
Alignment:
Q  80 aaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccag 179  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||| ||||||||| |||||||||||||||||    
T  25388791 aaaatctgtaacaaatctgctcccaaaaatatgttttatttttatctgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccag 25388692  T
Q  180 tgccttgcccaaaaaactaaaacctccatcgtgcc 214  Q
    |||||||||||||||||||||||||||||||||||    
T  25388691 tgccttgcccaaaaaactaaaacctccatcgtgcc 25388657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 89 - 275
Target Start/End: Original strand, 18099521 - 18099708
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||| |||| ||  |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||     
T  18099521 aacaaatctgcacccaaaaatacgtttctattgttcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgtcttg- 18099619  T
Q  188 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    ||  |||||| |||||||| |||||||| ||  |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  18099620 cctcaaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacgattttgcagaaacctgattttaagttaactctcacaa 18099708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 89 - 275
Target Start/End: Original strand, 22114656 - 22114843
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||| | || ||  |||||| | |||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  22114656 aacaaatctgcacccaaaaatacgtttctgttattcgccgccatcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgc 22114755  T
Q  188 ccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |  ||||||| |||||||||||||||| ||  ||||| || ||||||||||||| | |||||||||||||||||||||||||||||||    
T  22114756 ctcaaaaactgaaacctccatcgtgccacgttgcccaaccatcgtgccacgattctacagaaacctgattttaagttaactctcacaa 22114843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 80 - 275
Target Start/End: Complemental strand, 5886178 - 5885982
Alignment:
Q  80 aaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccag 179  Q
    |||| ||||||||||| ||| ||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||| |||||||||||||||||    
T  5886178 aaaatctgtaacaaatttgcacccaaaaatacgttttatttttatctgccagcgcaccatcgtaccacgatgcgaccccatcgtgccacgatttttccag 5886079  T
Q  180 tgccttgcccaaaaaactaaaacctccatcgtgccgcg-aagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    | ||||||| ||||||||||||| ||||||||||| ||   || |  |  ||||||||||||| || | |||||| |||||||||||||||||||||    
T  5886078 taccttgcctaaaaaactaaaacatccatcgtgccacgtttgcgcttcaatcgtgccacgattctgtaaaaacctaattttaagttaactctcacaa 5885982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 35777280 - 35777163
Alignment:
Q  157 ccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgat 256  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| |||||||||||||| |||||||| || ||    
T  35777280 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagctgtcgtgccacgattctgcagaaatctaat 35777181  T
Q  257 tttaagttaactctcaca 274  Q
    ||||||||||||||||||    
T  35777180 tttaagttaactctcaca 35777163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 89 - 273
Target Start/End: Complemental strand, 5191559 - 5191374
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| |||||||||||||||||| || |||||| |||||||||||||||||| ||||||    
T  5191559 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgagatcccatcgtgccacgatttttccagtaccttgc 5191460  T
Q  188 ccaaaaaactaaaacctcca-tcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcac 273  Q
    |  |||| || ||||||||| ||||||| ||| |||||||  ||||||||||||| |||||||| ||||||||||||||||||||||    
T  5191459 ctcaaaa-ctgaaacctccaatcgtgccacgatgcccagcaatcgtgccacgattctgcagaaatctgattttaagttaactctcac 5191374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 275
Target Start/End: Original strand, 10956378 - 10956564
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| || |||||||||||| | || ||  | |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10956378 aacaaatctgcacctaaaaatacgtttatgttattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 10956477  T
Q  188 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 275  Q
    ||  |||||| |||||||| ||||||||  || | |||||| | |||||||||||  ||||| | |||||||||||||||||||||||||    
T  10956478 cc-caaaactgaaacctccaatcgtgccatgatgtccagccat-gtgccacgattcctgcag-atcctgattttaagttaactctcacaa 10956564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 275
Target Start/End: Original strand, 18097291 - 18097423
Alignment:
Q  143 gccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccgcgaagcccagccgtcgtgccacgatt 241  Q
    ||||| ||||||||||||| |||||||||||||||  |||||||||  |||| || ||||||||| ||||||| ||  |||||||| |||||||||||||    
T  18097291 gccactatgcgaccccatcgtgccacgatttttcctatgccttgcctcaaaa-ctgaaacctccaatcgtgccacgttgcccagccatcgtgccacgatt 18097389  T
Q  242 gtgcagaaacctgattttaagttaactctcacaa 275  Q
     |||||||||||||||||||||||||||||||||    
T  18097390 ttgcagaaacctgattttaagttaactctcacaa 18097423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 6066139 - 6066210
Alignment:
Q  80 aaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatg 151  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  6066139 aaaatctgtaacaaatctgctcccaaaaatacattttatttttatccgccagcgcaccatcgtgccacgatg 6066210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 6063756 - 6063830
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| |||||||||||||    
T  6063756 tacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaatctg 6063830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 7606878 - 7606964
Alignment:
Q  189 caaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    ||||||||| |||||||||||||||| ||  |||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  7606878 caaaaaactgaaacctccatcgtgccacgttgcccagccatcgtgtcacgattctgcagaaacctgattttaagttaactctcacaa 7606964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 25388847 - 25388773
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| |||||||||||||    
T  25388847 tacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaatctg 25388773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 38889875 - 38889757
Alignment:
Q  157 ccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcag-aaacctga 255  Q
    ||||| |||||||||||||||| ||||||||| |||||||| |||||||||||||||| ||  |||  ||| |||| |||||||| ||||| |||||| |    
T  38889875 ccatcgtgccacgatttttccaatgccttgcctaaaaaactgaaacctccatcgtgccacgttgccttgccatcgtaccacgattctgcagaaaacctaa 38889776  T
Q  256 ttttaagttaactctcaca 274  Q
    |||||||||||||||||||    
T  38889775 ttttaagttaactctcaca 38889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 53896504 - 53896578
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||| |||||||||||||    
T  53896504 tacaaggtctatatttatagtgaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaatctg 53896578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 127 - 276
Target Start/End: Complemental strand, 26720415 - 26720266
Alignment:
Q  127 gccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccag 225  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| ||  |||  | |||||||| ||| |||| ||  || |||    
T  26720415 gccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaatcctgccacgttgctcag 26720317  T
Q  226 ccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaaa 276  Q
    || |||||||||||||  ||||| | ||||||||||||||||||||||||||    
T  26720316 ccatcgtgccacgattcctgcag-atcctgattttaagttaactctcacaaa 26720266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 6719419 - 6719493
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| |||| ||||||||    
T  6719419 tacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgtatcaaatctg 6719493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 5899706 - 5899633
Alignment:
Q  4 aaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgta 77  Q
    |||||||||||||||||||||||||  ||||||||||| |||||||||||||| |||| |||||||||||||||    
T  5899706 aaggtctatatttatagtaaaagtctcgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaatctgta 5899633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 1321347 - 1321247
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| | |||||||| |||| | |||||  | ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  1321347 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgctttgc 1321248  T
Q  188 c 188  Q
    |    
T  1321247 c 1321247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 11163008 - 11162891
Alignment:
Q  157 ccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctga 255  Q
    ||||| |||||| |||||||||||||||||||  ||||||| |||||||||||||||| ||  |||||||  |||||||||||||  ||||| | | |||    
T  11163008 ccatcgtgccacaatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcttga 11162910  T
Q  256 ttttaagttaactctcaca 274  Q
    |||||||||||||||||||    
T  11162909 ttttaagttaactctcaca 11162891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 10192401 - 10192525
Alignment:
Q  145 cacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtg 244  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||  |||||| |||||||||||||||| ||  |||  ||  |||||||||||||  |    
T  10192401 cacgatgcgatcccatcgtgccacgatttttccagtgccttg-cctcaaaactgaaacctccatcgtgccacgttgccttgcgatcgtgccacgattccg 10192499  T
Q  245 cagaaacctgattttaagttaactct 270  Q
    || ||| |||||||| ||||||||||    
T  10192500 cataaatctgattttcagttaactct 10192525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 10958674 - 10958767
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtg 181  Q
    ||||||||||| || |||||||||||| | || ||  | |||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  10958674 aacaaatctgcacctaaaaatacgtttctgttattggctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 10958767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 89 - 172
Target Start/End: Complemental strand, 3859434 - 3859350
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatt 172  Q
    ||||||||||| ||||||||||||||| |||| ||  |||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  3859434 aacaaatctgcacccaaaaatacgtttatattattcgccgccagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatt 3859350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 89 - 274
Target Start/End: Original strand, 32264394 - 32264580
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| |||||||||| |||| | || ||  | |||||| ||||||||||||||| ||| | |||||| ||||||||    ||||||| |||||    
T  32264394 aacaaatctgcacccaaaaatatgtttctgttattcgctgccagcgcaccatcgtgccacgttgcaagcccatcgtgccacgaaaaatccagtgacttgc 32264493  T
Q  188 ccaaaaaactaaaacctcca-tcgtgccgcgaagcccagccgtcgtgccacgattg-tgcagaaacctgattttaagttaactctcaca 274  Q
    |  ||||||| ||||||||| ||||||| ||   ||||||| |||||||||||||  |||| |||||||||||||||||||||||||||    
T  32264494 ctcaaaaactgaaacctccaatcgtgccacgtt-cccagccatcgtgccacgatttctgca-aaacctgattttaagttaactctcaca 32264580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6066105 - 6066159
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgct 55  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  6066105 tacaaggtctatatttatagtaaaagttctgcttaaaatctgtaacaaatctgct 6066159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 5522966 - 5523066
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| ||||||||||||||||||||| |||||  |||||||||||||||||| ||||||    
T  5522966 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccattgtgccacgatttttccagtaccttgc 5523065  T
Q  188 c 188  Q
    |    
T  5523066 c 5523066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 5886231 - 5886163
Alignment:
Q  4 aaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaat 72  Q
    ||||||||||||||||||||||||   ||||||||||| |||||||||||||| |||| ||||||||||    
T  5886231 aaggtctatatttatagtaaaagtttcgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaat 5886163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 164 - 275
Target Start/End: Complemental strand, 11170255 - 11170144
Alignment:
Q  164 gccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaag 262  Q
    |||||||||||||||||||||||||  ||||||  |||||||||||||||| ||  |||||||   ||||||||||||  ||||| | | ||||||||||    
T  11170255 gccacgatttttccagtgccttgcctcaaaaaccgaaacctccatcgtgccacgttgcccagcaaccgtgccacgattcctgcag-atcttgattttaag 11170157  T
Q  263 ttaactctcacaa 275  Q
    |||||||||||||    
T  11170156 ttaactctcacaa 11170144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 6719532 - 6719651
Alignment:
Q  157 ccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcc---atcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacct 253  Q
    ||||| |||||||||||||||||||| ||||| ||||| || |||||||    |||||||| ||| ||||  |  |||||||||||||  ||||||||||    
T  6719532 ccatcgtgccacgatttttccagtgcattgcctaaaaa-ctgaaacctctccaatcgtgccacgatgcccttcaatcgtgccacgattaagcagaaacct 6719630  T
Q  254 gattttaagttaactctcaca 274  Q
    ||||||||||||| |||||||    
T  6719631 gattttaagttaattctcaca 6719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 25388663 - 25388617
Alignment:
Q  229 tcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  25388663 tcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 25388617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 38889988 - 38889914
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    |||||||||||||||||||||||||||   ||||||||| |  ||||||||||||| |||| |||||||||||||    
T  38889988 tacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcttaaaatctgtaacaaatctg 38889914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 3859362 - 3859317
Alignment:
Q  229 tcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  3859362 tcgtgccacgattatgcagaaacctgattttaagttaactctcaca 3859317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 6066211 - 6066252
Alignment:
Q  173 tttccagtgccttgcccaaaaaactaaaacctccatcgtgcc 214  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  6066211 tttccagtgccttgcccaaaaaactaaaacctccatcgtgcc 6066252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 10085481 - 10085605
Alignment:
Q  145 cacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtg 244  Q
    ||||||| || |||||| |||||||||||||||||||||||| ||  |||||| |||||||||||||||| ||  |||  ||  || ||||||||||  |    
T  10085481 cacgatgtgatcccatcgtgccacgatttttccagtgccttg-cctcaaaactgaaacctccatcgtgccacgttgccttgcgatcatgccacgattccg 10085579  T
Q  245 cagaaacctgattttaagttaactct 270  Q
    || ||| |||||||| ||||||||||    
T  10085580 cataaatctgattttcagttaactct 10085605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35777370 - 35777317
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    ||||| |||||||||||||||||||||| |||||||||||| ||||||||||||    
T  35777370 tacaatgtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 35777317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 302 - 393
Target Start/End: Complemental strand, 29765300 - 29765208
Alignment:
Q  302 atggaacatgatggaatctattccatcccataccaccatctttctc--tattttcattccccccaatttgggaggtatgcaatggaatggaacc 393  Q
    ||||| |||||||||||| ||||||||| |||||||||| ||||||   ||||||||| |||| ||||||||  |||||||||||||| |||||    
T  29765300 atggagcatgatggaatcaattccatccaataccaccat-tttctccaaattttcattaccccaaatttggggtgtatgcaatggaatcgaacc 29765208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 274
Target Start/End: Original strand, 6066246 - 6066291
Alignment:
Q  229 tcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  6066246 tcgtgccacaattctgcagaaacctgattttaagttaactctcaca 6066291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 4308648 - 4308725
Alignment:
Q  104 aaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtg 181  Q
    ||||||||||||||||||||||  | | | |||||||||| |||||| ||| || ||| || ||||||||||||||||    
T  4308648 aaaaatacgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcgtggcacgatttttccagtg 4308725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18097209 - 18097262
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    ||||||||||||||||||||||||||||  ||||||||| |  |||||||||||    
T  18097209 tacaaggtctatatttatagtaaaagtctcgcttaaaatttgaaacaaatctgc 18097262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26720497 - 26720444
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||  |||||||||| |  |||||||||||    
T  26720497 tacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgc 26720444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 51727373 - 51727450
Alignment:
Q  104 aaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtg 181  Q
    ||||||||||||||||||||||  | | |||||||||||| |||||| ||| |  ||| || ||||||||||||||||    
T  51727373 aaaaatacgttttatttttatcttcaatcacaccatcgtggcacgattcgatcaaatcgtggcacgatttttccagtg 51727450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 401
Target Start/End: Original strand, 8925816 - 8925916
Alignment:
Q  302 atggaacatgatggaatctattccatcccataccaccatct-ttctctattttcattccccccaatttgggaggtatgcaatggaatggaaccacttaat 400  Q
    |||||||||| ||||||||||||||||| |||| | |||||  |||   |||||||||| || ||| || ||||||| |||||||||| ||| |||||||    
T  8925816 atggaacatggtggaatctattccatcctatactatcatctcgtcttatttttcattcctcctaatctgcgaggtatacaatggaatgaaacaacttaat 8925915  T
Q  401 t 401  Q
    |    
T  8925916 t 8925916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 391
Target Start/End: Complemental strand, 39439893 - 39439851
Alignment:
Q  349 attttcattccccccaatttgggaggtatgcaatggaatggaa 391  Q
    |||||||||||||||||||||||  |||| |||||||||||||    
T  39439893 attttcattccccccaatttggggtgtatccaatggaatggaa 39439851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3859477 - 3859424
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  3859477 tacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgc 3859424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5522923 - 5522976
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  5522923 tacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgc 5522976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11170353 - 11170300
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  11170353 tacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 11170300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15780809 - 15780756
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  15780809 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 15780756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18162613 - 18162560
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  18162613 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 18162560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22114613 - 22114666
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  22114613 tacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 22114666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 25690723 - 25690800
Alignment:
Q  104 aaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtg 181  Q
    ||||||||||||||||||||||  | | | |||||||||| ||| || ||| || ||| || ||||||||||||||||    
T  25690723 aaaaatacgttttatttttatcttcaatcgcaccatcgtggcacaattcgatccaatcatggcacgatttttccagtg 25690800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 27101627 - 27101704
Alignment:
Q  104 aaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtg 181  Q
    ||||||||||||||||||||||  | | | ||||||| || |||||| ||| || ||| || ||||||||||||||||    
T  27101627 aaaaatacgttttatttttatcttcaatcgcaccatcttggcacgattcgatccaatcgtggcacgatttttccagtg 27101704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32264351 - 32264404
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  32264351 tacaaggtctatatttatagtaaaagtatcgcttaaaatttgaaacaaatctgc 32264404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 35918316 - 35918393
Alignment:
Q  104 aaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtg 181  Q
    ||||||||||||||||||||||  | | | |||||||||| ||| || ||| || ||| ||| |||||||||||||||    
T  35918316 aaaaatacgttttatttttatcttcaatcgcaccatcgtggcactattcgatccaatcgtgctacgatttttccagtg 35918393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 395
Target Start/End: Complemental strand, 42029317 - 42029272
Alignment:
Q  350 ttttcattccccccaatttgggaggtatgcaatggaatggaaccac 395  Q
    |||||||||| |||||||||||  |||| |||||||||||||||||    
T  42029317 ttttcattccacccaatttggggtgtatccaatggaatggaaccac 42029272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 43228181 - 43228108
Alignment:
Q  104 aaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttcc 177  Q
    ||||||||||||||||||||||  | | | |||||||||| |||||| ||| || ||| || ||||||||||||    
T  43228181 aaaaatacgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcgtggcacgatttttcc 43228108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45882888 - 45882835
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  45882888 tacaaggtctatatttatagtaaaagtatcgcttaaaattttcaacaaatctgc 45882835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 48361978 - 48362031
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  48361978 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 48362031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 377
Target Start/End: Complemental strand, 42108320 - 42108244
Alignment:
Q  302 atggaacatgatggaatctattccatcccataccaccatctttc-tctattttcattccccccaatttgggaggtat 377  Q
    |||| ||||||||||||||||||||| |||| ||| |||||| | ||  |||||||||| || ||||||||| ||||    
T  42108320 atggtacatgatggaatctattccattccattccatcatcttccttcatttttcattcctcctaatttgggatgtat 42108244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 45882804 - 45882752
Alignment:
Q  129 cagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtg 181  Q
    |||| ||||||||||||||| ||| | |||||| || ||||||||||||||||    
T  45882804 cagcgcaccatcgtgccacgttgcaatcccatcgtggcacgatttttccagtg 45882752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 16932099 - 16932361
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||            |||||||||||||||||    
T  16932099 tacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa------------actgtaacaaatctgct 16932186  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16932187 cccaaaaatacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 16932286  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16932287 acctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 16932361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 16934453 - 16934714
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||            |||||||||||||||||    
T  16934453 tacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa------------actgtaacaaatctgct 16934540  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16934541 cccaaaaatacgttttatttttatccgacagcgcaccatcgtgccaggatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 16934640  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    ||||||||||||||  |  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16934641 acctccatcgtgccatgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 16934714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 22783056 - 22783317
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||            |||||||||||||||||    
T  22783056 tacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa------------actgtaacaaatctgct 22783143  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  22783144 cccaaaaatacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccatgatttttccagtgccttgcccaaaaaactaaa 22783243  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    |||||||||||||| ||  |||||||  |||| |||||||| ||||||||||||||||||||||||||||||||    
T  22783244 acctccatcgtgccacgttgcccagctatcgtaccacgattctgcagaaacctgattttaagttaactctcaca 22783317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 22780691 - 22780953
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||            |||||||||||||||||    
T  22780691 tacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa------------actgtaacaaatctgct 22780778  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  22780779 cccaaaaatacgttttatttttatccgccagcgcaccatcgtgccacaatgagaccccatcgtgccatgatttttccagtgccttgcccaaaaaactaaa 22780878  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||||||| ||  |||||||  |||| |||||||| |||||||||||||||||||||||||||||||||    
T  22780879 acctccatcgtgccacgttgcccagctatcgtaccacgattctgcagaaacctgattttaagttaactctcacaa 22780953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 88 - 274
Target Start/End: Original strand, 9176848 - 9177035
Alignment:
Q  88 taacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttg 186  Q
    |||||||||||| |||||||||| |||| | |||||  | |||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  9176848 taacaaatctgcacccaaaaatatgtttctgtttttccctgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttg 9176947  T
Q  187 cccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    || ||||||||||||||||||||||||| ||  ||| | |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9176948 cctaaaaaactaaaacctccatcgtgccacgttgcctaaccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 9177035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 80 - 275
Target Start/End: Original strand, 9174490 - 9174685
Alignment:
Q  80 aaaaactgtaacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttcca 178  Q
    |||||||||||||||||||| |||||||||| |||| | |||||  | |||||| |||||||||||||||||| ||||||||| ||||| ||||||||||    
T  9174490 aaaaactgtaacaaatctgcacccaaaaatatgtttctgtttttccctgccagcgcaccatcgtgccacgatgagaccccatcgtgccatgatttttcca 9174589  T
Q  179 gtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||| || |||||||||||||||||||||  ||  ||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  9174590 gtgccttgcctaataaactaaaacctccatcgtgctacgttgcctagccgtcgtgccacgattctgcag-aacctgattttaagttaactctcacaa 9174685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 80 - 275
Target Start/End: Original strand, 11006585 - 11006782
Alignment:
Q  80 aaaaactgtaacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttcca 178  Q
    |||| ||||||||||||||| |||||||||| |||| | |||||  | |||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  11006585 aaaatctgtaacaaatctgcacccaaaaatatgtttctgttttttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 11006684  T
Q  179 gtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgca-gaaacctgattttaagttaactctcacaa 275  Q
    |||||||||| |||||| | |||||||||||||||| ||  |||||||  ||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  11006685 gtgccttgcctaaaaaattgaaacctccatcgtgccacgttgcccagcgatcgtgccacgattctgcataaaacctgattttaagttaactctcacaa 11006782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 127 - 272
Target Start/End: Complemental strand, 51015187 - 51015042
Alignment:
Q  127 gccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagc 226  Q
    |||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||| |||||||||||||||| ||  |||  ||    
T  51015187 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctaaaaaactgaaacctccatcgtgccacgttgccttgc 51015088  T
Q  227 cgtcgtgccacgattgtgcagaaacctgattttaagttaactctca 272  Q
    | || |||||||||| |||||||| |||||||||||||||||||||    
T  51015087 catcatgccacgattctgcagaaatctgattttaagttaactctca 51015042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 89 - 270
Target Start/End: Original strand, 37089727 - 37089910
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| || |||||||||||| | || ||  |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  |    
T  37089727 aacaaatctgcacctaaaaatacgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcctcac 37089826  T
Q  188 ccaaaaaactaaaacctc-catcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactct 270  Q
    | ||||||||||||| || ||||||||| ||  |||  ||| ||||||||||||| |||||||| |||||||||||||||||||    
T  37089827 ctaaaaaactaaaacatctcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaatctgattttaagttaactct 37089910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 89 - 275
Target Start/End: Original strand, 36919940 - 36920126
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||| || | ||  | |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||     
T  36919940 aacaaatctgcacccaaaaatacgtttctactattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgacttg- 36920038  T
Q  188 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    ||  |||| | |||||||| |||||||| ||  |||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||    
T  36920039 cctcaaaattgaaacctccaatcgtgccacgttgcccagccatcgtgccacgattttgcag-aacctgattttaagttaactctcacaa 36920126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 89 - 278
Target Start/End: Complemental strand, 38409179 - 38408989
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| | |||||||| |||| | |||||  |||||| | |||||||||||||||||||||||||||| |||||||||||||||||||| |||     
T  38409179 aacaaatctgcactcaaaaatatgtttctgtttttcgccgccaacgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 38409081  T
Q  188 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaaaat 278  Q
    ||  |||  | |||||||| |||||||| ||| |||||||  ||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  38409080 cctcaaacttgaaacctccaatcgtgccacgatgcccagcaatcgtgccacgattctgcagaaatctaattttaagttaactctcacaaaat 38408989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 89 - 274
Target Start/End: Original strand, 5637822 - 5638006
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||| ||||||| | |||||  | |||||| ||||||| ||||||||||||| |||||| || || |||||||||||||||||||    
T  5637822 aacaaatctgcacccaaaa-tacgtttctgtttttcgctgccagctcaccatcatgccacgatgcgatcccatcgtgacatgatttttccagtgccttgc 5637920  T
Q  188 ccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    |  |||| || |||||||||||||||| ||  |||||||  |||||||||||||  |||||||||||||||||||||||||||||||    
T  5637921 ctcaaaa-ctgaaacctccatcgtgccacgttgcccagcaatcgtgccacgattccgcagaaacctgattttaagttaactctcaca 5638006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 7941251 - 7941133
Alignment:
Q  157 ccatcctgccacgatttttccagtgccttgcc-caaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctga 255  Q
    ||||| |||||| ||||||||||||||||||| ||||||||| |||||||||||||||| ||  |||||||| ||||||||||||| |||||||||||||    
T  7941251 ccatcgtgccaccatttttccagtgccttgcctcaaaaaactgaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacctga 7941152  T
Q  256 ttttaagttaactctcaca 274  Q
    |||||||||||||||||||    
T  7941151 ttttaagttaactctcaca 7941133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 275
Target Start/End: Original strand, 3824926 - 3825113
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||| | || ||   ||||| | |||||||||||||||||||||||||||  ||||| |||||||||||||| ||||    
T  3824926 aacaaatctgcacccaaaaatacgtttctgttattcgtcgccaacgcaccatcgtgccacgatgcgaccccattgtgccatgatttttccagtgctttgc 3825025  T
Q  188 ccaaaaaactaaaacctcca-tcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |  |||| || ||||||||| |||||||  |  |||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  3825026 ctcaaaa-ctgaaacctccaatcgtgccatgttgcccagccatcgtgtcacgattctgcagaaacctgattttaagttaactctcacaa 3825113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 11434887 - 11434769
Alignment:
Q  157 ccatcctgccacgatttttccagtgccttgcc-caaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctga 255  Q
    ||||| ||||||||||||||||||| |||||| ||||||||| |||||||||||||||| ||  |||||||| |||| |||||||| |||||||||||||    
T  11434887 ccatcgtgccacgatttttccagtgtcttgcctcaaaaaactgaaacctccatcgtgccacgttgcccagccatcgtaccacgattctgcagaaacctga 11434788  T
Q  256 ttttaagttaactctcaca 274  Q
    |||||||||||||||||||    
T  11434787 ttttaagttaactctcaca 11434769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 86 - 275
Target Start/End: Complemental strand, 18847114 - 18846922
Alignment:
Q  86 tgtaacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgcct 184  Q
    |||||||||||||| |||||||||| |||| | |||||  |||| ||| |||||||||||||||||||||||||||| | |||||||||||||||| |||    
T  18847114 tgtaacaaatctgcacccaaaaatatgtttctgtttttccccgcgagcgcaccatcgtgccacgatgcgaccccatcgtaccacgatttttccagtacct 18847015  T
Q  185 tgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgattgtgcag--aaacctgattttaagttaactctcacaa 275  Q
    || ||  |||||| |||||||| |||||||| |||  |||| |  ||||||||||||| |||||  ||| ||||||||||||||||||||||||    
T  18847014 tg-cctcaaaactgaaacctccaatcgtgccacgattcccaacaatcgtgccacgattctgcagaaaaatctgattttaagttaactctcacaa 18846922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 89 - 270
Target Start/End: Complemental strand, 24888776 - 24888594
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||     
T  24888776 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttg- 24888678  T
Q  188 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactct 270  Q
    ||  |||  | |||||||| |||||||| ||  ||| |||| ||||||||| ||| |||||||| |||||||||||||||||||    
T  24888677 cctcaaacttgaaacctccaatcgtgccacgttgcctagccatcgtgccacaattctgcagaaatctgattttaagttaactct 24888594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18847176 - 18847102
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  18847176 tacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgctttaaatttgtaacaaatctg 18847102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 134 - 274
Target Start/End: Original strand, 36921894 - 36922033
Alignment:
Q  134 caccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgt 232  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||| |||| ||  |||||| |||||||| ||||||||  |  |||||||| ||||    
T  36921894 caccatcgtgccacaatgcgaccccatcgtgccacgatttttccagtgacttg-cctcaaaactgaaacctccaatcgtgccatgttgcccagccatcgt 36921992  T
Q  233 gccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
     |||||||| ||||| ||||||||||||||||||||||||||    
T  36921993 accacgattttgcag-aacctgattttaagttaactctcaca 36922033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 80 - 195
Target Start/End: Original strand, 11008936 - 11009052
Alignment:
Q  80 aaaaactgtaacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttcca 178  Q
    |||| ||||||||||||||| |||||||||| |||| | |||||  | |||||  |||||||||||||||||||||||||||| ||||||||||||||||    
T  11008936 aaaatctgtaacaaatctgcacccaaaaatatgtttctgttttttgctgccagtgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 11009035  T
Q  179 gtgccttgcccaaaaaa 195  Q
    |||||||||| ||||||    
T  11009036 gtgccttgcctaaaaaa 11009052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 127 - 275
Target Start/End: Original strand, 22044781 - 22044931
Alignment:
Q  127 gccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc--ccaaaaaactaaaacctccatcgtgccgcgaagccca 224  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||  | |||||| | |||||||||||||||| ||  ||||     
T  22044781 gccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaaaaaatgaaacctccatcgtgccacgttgccct 22044880  T
Q  225 gccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 275  Q
     |  |||||||||||||  ||||| | | |||||||||||||||||||||||    
T  22044881 tcaatcgtgccacgattcctgcag-atcttgattttaagttaactctcacaa 22044931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 89 - 274
Target Start/End: Original strand, 31849952 - 31850138
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  31849952 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccaagatttttccagtgccttgc 31850051  T
Q  188 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcaca 274  Q
    ||  |||||| |||||||| |||||||| ||  |||||||  ||||||||| |||  ||||| | | ||||||||||||||||||||||    
T  31850052 cc-caaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacaattcctgcag-atcttgattttaagttaactctcaca 31850138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 127 - 272
Target Start/End: Original strand, 22803125 - 22803270
Alignment:
Q  127 gccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccag 225  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||  ||  |||||| |||||||| |||||||| ||  ||||||    
T  22803125 gccagcgcaccatcgtgccacgatgcgaccccatcgagccacgatttttccagtgcctt-tcctcaaaactgaaacctccaatcgtgccacgttgcccag 22803223  T
Q  226 ccgtcgtgccacgattgtgcagaaacctgattttaagttaactctca 272  Q
    || |||| |||||||| |  |||||  ||||||||||||||||||||    
T  22803224 ccatcgtaccacgattctatagaaatttgattttaagttaactctca 22803270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 11008880 - 11008954
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| |||||||||||||    
T  11008880 tacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaatctg 11008954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 9176784 - 9176858
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    |||||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||||||| |||||||||||    
T  9176784 tacaaggtctatatttatagtaaatgtcttgcttaaaaactgtaacaaatctgctttaaatttataacaaatctg 9176858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11006551 - 11006604
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  11006551 tacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 11006604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 22047076 - 22047135
Alignment:
Q  127 gccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||    
T  22047076 gccagcacaccatcgtgccacgatgcgatcccatcgtgcca-gatttttccagtgccttgc 22047135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 278
Target Start/End: Complemental strand, 48486299 - 48486109
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||| | || ||  | |||||| |||||| |||||||  || ||||||||| ||||||||    ||||||| |||||    
T  48486299 aacaaatctgcacccaaaaatacgtttctgttattcgctgccagcgcaccattgtgccacattgtgaccccatcgtgccacgaaaaatccagtgacttgc 48486200  T
Q  188 ccaaaaaactaaaacctcca-tcgtgccgcgaagcccagccgtcgtgccacgattg-tgcagaaacctgattttaagttaactctcacaaaat 278  Q
    |  |||| || ||||||||| ||||||| ||  || ||||| |||||||||||||  ||||| | ||||||||||||||||||||||||||||    
T  48486199 ctcaaaa-ctgaaacctccaatcgtgccacgttgctcagccatcgtgccacgatttctgcagga-cctgattttaagttaactctcacaaaat 48486109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9174456 - 9174509
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||| ||||||||| || ||||||||||||    
T  9174456 tacaaggtctatatttatagtaaaagtcttgcttaaaaactgtaacaaatctgc 9174509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 5198400 - 5198300
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||| |||||||||||||||||| || |||||| ||||||||||||||||| || ||||    
T  5198400 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgtgatcccatcgtgccacgatttttccagagctttgc 5198301  T
Q  188 c 188  Q
    |    
T  5198300 c 5198300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 9148192 - 9148140
Alignment:
Q  136 ccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcc 188  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||| |||||    
T  9148192 ccatcgtgccacgatgcaaccccatcgtgccacgatttttccagtgctttgcc 9148140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 392
Target Start/End: Complemental strand, 41223693 - 41223651
Alignment:
Q  350 ttttcattccccccaatttgggaggtatgcaatggaatggaac 392  Q
    |||||||||||||||| ||||||||||| ||||||||||||||    
T  41223693 ttttcattccccccaaattgggaggtatccaatggaatggaac 41223651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3824883 - 3824936
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||  |||||||||| |  |||||||||||    
T  3824883 tacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgc 3824936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24888819 - 24888766
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||  |||||||||| |  |||||||||||    
T  24888819 tacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgc 24888766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37089684 - 37089737
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||  |||||||||| |  |||||||||||    
T  37089684 tacaaggtctatatttatagtaaaagttttgcttaaaatttggaacaaatctgc 37089737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 47274750 - 47274697
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||  |||||||||| |  |||||||||||    
T  47274750 tacaaggtctatatttatagtaaaagtattgcttaaaatttgaaacaaatctgc 47274697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 48084779 - 48084820
Alignment:
Q  350 ttttcattccccccaatttgggaggtatgcaatggaatggaa 391  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  48084779 ttttcattccccccaatttgggaggtatacgatggaatggaa 48084820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 392
Target Start/End: Complemental strand, 41809920 - 41809882
Alignment:
Q  354 cattccccccaatttgggaggtatgcaatggaatggaac 392  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  41809920 cattccccccaatttgggatgtattcaatggaatggaac 41809882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 619837 - 619882
Alignment:
Q  125 ccgccagcacaccatcgtgccacgatgcgaccccatcctgccacga 170  Q
    |||||||| |||||| |||||||| |||||||||||| ||||||||    
T  619837 ccgccagcgcaccattgtgccacgttgcgaccccatcgtgccacga 619882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5198443 - 5198390
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  5198443 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 5198390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5637779 - 5637832
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  5637779 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 5637832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 8528963 - 8528918
Alignment:
Q  229 tcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    ||||| ||||||| | |||||| |||||||||||||||||||||||    
T  8528963 tcgtgacacgattctccagaaatctgattttaagttaactctcaca 8528918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11434978 - 11434925
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  11434978 tacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 11434925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 16689303 - 16689380
Alignment:
Q  104 aaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtg 181  Q
    |||||||||||||  |||||||| | | | ||||||||||||||| |||||   |||| || ||||||||||||||||    
T  16689303 aaaaatacgtttttattttatcctcaatcgcaccatcgtgccacgttgcgatttcatcgtggcacgatttttccagtg 16689380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22801172 - 22801225
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  22801172 tacaaggtctatatttatagtaaaagtatcgcttaaaatttgaaacaaatctgc 22801225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22803044 - 22803097
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  22803044 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 22803097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24880474 - 24880421
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  24880474 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 24880421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36919897 - 36919950
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  36919897 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 36919950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38409222 - 38409169
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  38409222 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 38409169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 48486342 - 48486289
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  48486342 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 48486289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 4556422 - 4556494
Alignment:
Q  105 aaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttcc 177  Q
    |||||||||||||||||||||  | | | ||||||||||||||| |||||   |||| || ||||||||||||    
T  4556422 aaaatacgttttatttttatcttcaatcgcaccatcgtgccacgttgcgatttcatcgtggcacgatttttcc 4556494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 40091814 - 40091858
Alignment:
Q  134 caccatcgtgccacgatgcgaccccatcctgccacgatttttcca 178  Q
    |||||||||| |||| |||||||||||| || |||||||||||||    
T  40091814 caccatcgtgtcacgttgcgaccccatcatggcacgatttttcca 40091858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 183; Significance: 8e-99; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 43079611 - 43079346
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||         |||||| |||||||||||||    
T  43079611 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcttaaaatctgtaaaaaa---------aaaactataacaaatctgct 43079521  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  43079520 cccaaagatacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtaccacgatttttccagtgccttgcccaaaaaactaaa 43079421  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||||||| ||  |||  ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43079420 acctccatcgtgccacgttgccttgccgtcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 43079346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 43081983 - 43081721
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||            ||| |||||||||||||    
T  43081983 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcttaaaatctgtaacaaa------------actataacaaatctgct 43081896  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaa 200  Q
    |||||| |||||||||||||||||||||||||  ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43081895 cccaaagatacgttttatttttatccgccagcgtaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaa 43081796  T
Q  201 acctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||||||||| |   |||  ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43081795 acctccatcgtgccactttgccttgccgtcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 43081721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 58 - 275
Target Start/End: Complemental strand, 18812883 - 18812667
Alignment:
Q  58 aaatttgtaacaaatctgtaacaaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccc 157  Q
    ||||||||||||||||||   ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  18812883 aaatttgtaacaaatctgct-caaaatctgtaacaaatctgcacccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccc 18812785  T
Q  158 catcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgatt 257  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||  |||||||||||||||||||||| | |||||||||||||    
T  18812784 catcgtgccacgatttttccagtgccttgcctaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattcttcagaaacctgatt 18812685  T
Q  258 ttaagttaactctcacaa 275  Q
    ||||||||||||||||||    
T  18812684 ttaagttaactctcacaa 18812667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 58 - 274
Target Start/End: Complemental strand, 18810698 - 18810483
Alignment:
Q  58 aaatttgtaacaaatctgtaacaaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccc 157  Q
    ||||||||||||||||||   ||||| ||||||||||||||| |||||||||  ||||||||||||||||||||| |||||||||||||||||| |||||    
T  18810698 aaatttgtaacaaatctgct-caaaatctgtaacaaatctgcacccaaaaatgtgttttatttttatccgccagcgcaccatcgtgccacgatgtgaccc 18810600  T
Q  158 catcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgatt 257  Q
    |||| |||| | ||||||||||||||||||| |||||| |||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||    
T  18810599 catcgtgccgcaatttttccagtgccttgcctaaaaaaataaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgatt 18810500  T
Q  258 ttaagttaactctcaca 274  Q
    |||||||||||||||||    
T  18810499 ttaagttaactctcaca 18810483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 80 - 275
Target Start/End: Complemental strand, 44720812 - 44720616
Alignment:
Q  80 aaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccag 179  Q
    |||| ||||||||||||||| |||||||||| ||||   ||||  | |||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  44720812 aaaatctgtaacaaatctgcacccaaaaatatgtttctgtttttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccag 44720713  T
Q  180 tgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgattgtgcag-aaacctgattttaagttaactctcacaa 275  Q
    | ||||| ||  |||||| |||||||| | |||||| | | |||||||  || |||||||||| ||||| ||||||||||||||||||||||||||||    
T  44720712 taccttg-cctcaaaactgaaacctccaaacgtgccacaatgcccagcaatcatgccacgattctgcagaaaacctgattttaagttaactctcacaa 44720616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 89 - 276
Target Start/End: Complemental strand, 27826968 - 27826780
Alignment:
Q  89 aacaaatctgctcccaaaaatacgtttta-tttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| | |||||||| |||||  |||||  | |||||| ||||||||||||||||||||| |||||| |||||||||||||||||||| ||||    
T  27826968 aacaaatctgcactcaaaaatatgtttttgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgc 27826869  T
Q  188 ccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaaa 276  Q
       ||||| | |||||||||||||||| ||  |||||||  |||||||||||||  ||||| | ||||||||||||||||||||||||||    
T  27826868 ttcaaaaaatgaaacctccatcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcctgattttaagttaactctcacaaa 27826780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 27829279 - 27829092
Alignment:
Q  89 aacaaatctgctcccaaaaatacgtttta-tttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| | |||||||| |||||  |||||  | |||||| ||||||||||||||||||||| |||||| |||||||||||||||||||  ||||    
T  27829279 aacaaatctgcactcaaaaatatgtttttgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgttttgc 27829180  T
Q  188 ccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 275  Q
    |  ||||| | |||||||||||||||| ||  |||||||  |||||||||||||  ||||| | |||||||||||||||||||||||||    
T  27829179 ctcaaaaaatgaaacctccatcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcctgattttaagttaactctcacaa 27829092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 127 - 270
Target Start/End: Complemental strand, 14807695 - 14807552
Alignment:
Q  127 gccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccag 225  Q
    |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||| ||| ||  |||  | |||||||| |||||| | ||  |||||     
T  14807695 gccagcgcaccaccgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaatcgtgtcacgttgcccaa 14807597  T
Q  226 ccgtcgtgccacgattgtgcagaaacctgattttaagttaactct 270  Q
    || || |||||||||| ||||||||||||||||||||||||||||    
T  14807596 ccatcatgccacgattctgcagaaacctgattttaagttaactct 14807552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 127 - 274
Target Start/End: Original strand, 12517418 - 12517565
Alignment:
Q  127 gccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccag 225  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||| | ||| ||  |||||| |||||||| |||||||| ||  |||  |    
T  12517418 gccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtacattg-cctcaaaactgaaacctccaatcgtgccacgttgccttg 12517516  T
Q  226 ccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcaca 274  Q
    || |||||||||||||  ||||| | ||||||||||||||||||||||||    
T  12517517 ccatcgtgccacgattcctgcag-atcctgattttaagttaactctcaca 12517565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 44720865 - 44720794
Alignment:
Q  4 aaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| |||||||||||||    
T  44720865 aaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaatctg 44720794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 89 - 277
Target Start/End: Complemental strand, 15067963 - 15067774
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttttattt-ttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||||  || ||  | |||||| ||||||||||||||| ||||| |||||| || || ||||||||||||| ||||     
T  15067963 aacaaatctgcacccaaaaatacgtttttgttattcgctgccagcgcaccatcgtgccacgttgcgatcccatcgtggcatgatttttccagtggcttg- 15067865  T
Q  188 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaaaa 277  Q
    |   |||||| |||||||| ||||||||  |  |||||||| || ||||||||||  |||| ||| |||||||||||||||| |||||||||    
T  15067864 cttcaaaactgaaacctccaatcgtgccatgttgcccagccatcttgccacgattcctgca-aaatctgattttaagttaacactcacaaaa 15067774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 253
Target Start/End: Original strand, 3886330 - 3886419
Alignment:
Q  165 ccacgatttttccagtgccttgcc-caaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacct 253  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||||| ||  | |||||| || || ||||||| |||||||||||    
T  3886330 ccacgatttttccagtgtcttgcctcaaaaaactgaaacctccatcgtgccacgttgtccagccatcatgtcacgattctgcagaaacct 3886419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 15072692 - 15072505
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||||| ||||||| ||||||| ||||| |||||| || ||||||||||| |||| ||||     
T  15072692 aacaaatttgcacccaaaaatacgtttctgttattcgctgccagcgcaccatcatgccacgttgcgatcccatcgtgacacgatttttctagtggcttg- 15072594  T
Q  188 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 275  Q
    |   |||||| |||||||| |||||| | ||  |||||||| ||||| |||||||  ||||| || ||||||||||||||||||||||||    
T  15072593 cttcaaaactgaaacctccaatcgtgtcacgttgcccagccatcgtgtcacgattcctgcag-aatctgattttaagttaactctcacaa 15072505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 28251988 - 28252040
Alignment:
Q  136 ccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcc 188  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||| |||||    
T  28251988 ccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgcc 28252040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 29844286 - 29844375
Alignment:
Q  302 atggaacatgatggaatctattccatcccataccaccatctttctcta--ttttcattccccccaatttgggaggtatgcaatggaatgga 390  Q
    |||||| ||||||||||| ||||||||| ||||||||| ||| ||||   |||||||||   |||||||||||||||||||||||||||||    
T  29844286 atggaatatgatggaatccattccatcctataccacca-cttcctcttatttttcattctatccaatttgggaggtatgcaatggaatgga 29844375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 27325113 - 27325174
Alignment:
Q  309 atgatggaatctattccatcccataccaccatctttctctattttcattccccccaatttgg 370  Q
    ||||||||||| |||||||||||| ||| |||||| || |||||||||||| ||||||||||    
T  27325113 atgatggaatccattccatcccattccatcatcttcctttattttcattcctcccaatttgg 27325174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 392
Target Start/End: Complemental strand, 2742000 - 2741905
Alignment:
Q  296 aatagcatggaacatgatggaatctattccatcccataccaccatctttctctatttt-cattccccccaatttgggaggtatgcaatggaatggaac 392  Q
    |||| ||| ||||||||||||||| ||| |||| |||| |||||||||||| |||||| ||||  |||||  ||||||||||||||||  ||||||||    
T  2742000 aataacattgaacatgatggaatccattacatcacatatcaccatctttctttattttccatt--ccccagcttgggaggtatgcaataaaatggaac 2741905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18810733 - 18810659
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    |||||| ||||||||||||||||||||    |||||||| | |||||||||||||  |||| |||||||||||||    
T  18810733 tacaagatctatatttatagtaaaagtttcccttaaaatttgtaacaaatctgctcaaaatctgtaacaaatctg 18810659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18812918 - 18812844
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    |||||| ||||||||||||||||||||    |||||||| | |||||||||||||  |||| |||||||||||||    
T  18812918 tacaagatctatatttatagtaaaagtttcccttaaaatttgtaacaaatctgctcaaaatctgtaacaaatctg 18812844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 15820137 - 15820197
Alignment:
Q  311 gatggaatctattccatcccataccaccatctttctctattttcattccccccaatttggg 371  Q
    |||| |||| |||||||||||| ||| |||||| || |||||||||||| |||||||||||    
T  15820137 gatgtaatccattccatcccattccatcatcttcctttattttcattcctcccaatttggg 15820197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 388
Target Start/End: Complemental strand, 22531328 - 22531293
Alignment:
Q  353 tcattccccccaatttgggaggtatgcaatggaatg 388  Q
    ||||||||||||||||||||||||| ||||||||||    
T  22531328 tcattccccccaatttgggaggtatccaatggaatg 22531293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 388
Target Start/End: Complemental strand, 22536013 - 22535978
Alignment:
Q  353 tcattccccccaatttgggaggtatgcaatggaatg 388  Q
    ||||||||||||||||||||||||| ||||||||||    
T  22536013 tcattccccccaatttgggaggtatccaatggaatg 22535978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 388
Target Start/End: Complemental strand, 25993934 - 25993899
Alignment:
Q  353 tcattccccccaatttgggaggtatgcaatggaatg 388  Q
    ||||||||||||||||||||||||| ||||||||||    
T  25993934 tcattccccccaatttgggaggtatccaatggaatg 25993899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 392
Target Start/End: Complemental strand, 34924773 - 34924731
Alignment:
Q  350 ttttcattccccccaatttgggaggtatgcaatggaatggaac 392  Q
    |||||||||||||||| |||||||||||  |||||||||||||    
T  34924773 ttttcattccccccaaattgggaggtatctaatggaatggaac 34924731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14807776 - 14807723
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  14807776 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 14807723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28251877 - 28251930
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  28251877 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 28251930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 162; Significance: 3e-86; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 23783520 - 23783238
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctgtaacaaaaactgtaacaaatctgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||            ||||||    
T  23783520 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaa------------tctgct 23783433  T
Q  101 cccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgat---------------------ttttccag 179  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||                     ||||||||    
T  23783432 cccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatgcgaccccatcgtgccacgatttttccag 23783333  T
Q  180 tgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23783332 tgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 23783238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 80 - 275
Target Start/End: Complemental strand, 47179622 - 47179427
Alignment:
Q  80 aaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccag 179  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||| ||||||||||||| |||    
T  47179622 aaaatctgtaacaaatctgctcccaaaaatacgttttatttttatccgcaagcgcaccatcgtgccacgatgagaccccatcgtgccacgattttttcag 47179523  T
Q  180 tgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    ||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47179522 tgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 47179427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 80 - 275
Target Start/End: Complemental strand, 16226080 - 16225886
Alignment:
Q  80 aaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccag 179  Q
    |||| ||||||||||||||| ||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  16226080 aaaatctgtaacaaatctgcacccaaaa-tatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccag 16225982  T
Q  180 tgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    ||||||||||||||||||||||||||||||||||| ||  ||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  16225981 tgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccaaccgtcgtgccacgattctgcagaaacctgattttaagttaactcttacaa 16225886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 80 - 275
Target Start/End: Complemental strand, 47177271 - 47177077
Alignment:
Q  80 aaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccag 179  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||    
T  47177271 aaaatctgtaacaaatctgctcccaaaaataggttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccag 47177172  T
Q  180 tgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    || |||||||| ||||||||||||||||||||||| ||  |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47177171 tgtcttgccca-aaaactaaaacctccatcgtgccacgttgcccagtcgtcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 47177077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 277 - 451
Target Start/End: Complemental strand, 35306865 - 35306691
Alignment:
Q  277 atttctaaaaattggacggaatagcatggaacatgatggaatctattccatcccataccaccatctttctctatttt-cattccccccaatttgggaggt 375  Q
    |||||||||||||||| ||||| | |||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35306865 atttctaaaaattggatggaatggtatggaacatgatggaatccattccattccataccaccatctttctctatttttcattccccccaatttgggaggt 35306766  T
Q  376 atgcaatggaatggaaccacttaattctattattactcttttatccnnnnnnnnattacttcatcactgtactgat 451  Q
    ||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||    
T  35306765 atgcaatggaatggaaccacttaattctattattactcttttatcc-ctattttattacttcatcactgtactgat 35306691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 13761763 - 13761576
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||| | || ||  ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  13761763 aacaaatctgcacccaaaaatacgtttctgttattcgccgccagcacaccatcgtgccgcgatgcgaccccatcgtgccacgatttttccagtgccttgc 13761664  T
Q  188 ccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |  ||||||| ||||||||||| |||| ||  |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  13761663 ctcaaaaactgaaacctccatcatgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 13761576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 51752291 - 51752103
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||| | || ||  |||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  51752291 aacaaatctgcacccaaaaatacgtttatgttattcgccgccagcgcaccatcgtgccacgatgcggccccatcgtgccacgatttttccagtgccttgc 51752192  T
Q  188 c-caaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    | ||||||||| |||||||||||||||| ||  ||||| || ||||||||||||| |||||||||||||||||||||||||||||||||    
T  51752191 ctcaaaaaactgaaacctccatcgtgccacgttgcccaaccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 51752103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 89 - 274
Target Start/End: Complemental strand, 51749965 - 51749778
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||| | || ||  |||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  51749965 aacaaatctgcacccaaaaatacgtttctgttattcgccgccagcgcactatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 51749866  T
Q  188 c-caaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    | ||||||||| ||||||||||||| || ||  ||||| || ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  51749865 ctcaaaaaactgaaacctccatcgtaccacgttgcccaaccatcgtgccacgattctgcagaaacttgattttaagttaactctcaca 51749778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 20302385 - 20302197
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||| ||| |||||||||| |||| | || ||  |||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  20302385 aacaaatatgcacccaaaaatatgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgc 20302286  T
Q  188 c-caaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    | ||||||||| |||||||||||||||| ||  |||  ||| || |||| ||||| |||||||| ||||||||||||||||||||||||    
T  20302285 ctcaaaaaactgaaacctccatcgtgccacgttgccttgccatcatgccgcgattctgcagaaatctgattttaagttaactctcacaa 20302197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 89 - 254
Target Start/End: Complemental strand, 6823810 - 6823643
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||| | || ||  |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6823810 aacaaatctgcacccaaaaatacgtttatgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcatgccacgatttttccagtgccttgc 6823711  T
Q  188 c-caaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctg 254  Q
    | ||||||||| |||||||||||||||| ||  ||||| || |||||||| |||| |||| |||||||    
T  6823710 ctcaaaaaactgaaacctccatcgtgccacgttgcccaaccatcgtgccatgattctgcaaaaacctg 6823643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 157 - 277
Target Start/End: Complemental strand, 6822893 - 6822772
Alignment:
Q  157 ccatcctgccacgatttttccagtgccttgcc-caaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctga 255  Q
    ||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||  |||||||| ||||||||||||| |||||||||||||    
T  6822893 ccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacctga 6822794  T
Q  256 ttttaagttaactctcacaaaa 277  Q
    ||||||||||||||||||||||    
T  6822793 ttttaagttaactctcacaaaa 6822772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 275
Target Start/End: Original strand, 10400183 - 10400370
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||| | || ||  | |||||| |||||||||||||||||||||||||||| ||||||||| |||||||||| |||     
T  10400183 aacaaatctgcacccaaaaatacgtttatgttatttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatatttccagtgctttg- 10400281  T
Q  188 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    ||  |||  | |||||||| |||||||| ||  |||||||  |||||||||||||  ||||||||||||||||||||||||||||||||    
T  10400282 cctcaaacttgaaacctccaatcgtgccacgttgcccagcaatcgtgccacgattccgcagaaacctgattttaagttaactctcacaa 10400370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 16231458 - 16231368
Alignment:
Q  157 ccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcag 247  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||    
T  16231458 ccatcgtgccacgatttttccagtgtcttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcag 16231368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 89 - 274
Target Start/End: Complemental strand, 28840604 - 28840418
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| | |||||||| |||| | |||||  | |||||||||||||||||||||||||||| |||||| |||||| ||||||||||| |||||     
T  28840604 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacaatttttccagtaccttg- 28840506  T
Q  188 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcaca 274  Q
    || ||||||| |||||||| |||||||| ||  |||  ||| |||||||||||||  ||||| | |||||||||||||||||| |||||    
T  28840505 cctaaaaactgaaacctccaatcgtgccacgttgccttgccatcgtgccacgattcctgcag-atcctgattttaagttaactttcaca 28840418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 16231570 - 16231496
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| |||||||||||||    
T  16231570 tacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaatctg 16231496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 127 - 275
Target Start/End: Complemental strand, 28842380 - 28842232
Alignment:
Q  127 gccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccag 225  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||||||| ||||| || ||||||| |||||||| |||||||| || ||||  |    
T  28842380 gccaggacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtaccttg-cctaaaaactgaaacctccaatcgtgccacgtagccttg 28842282  T
Q  226 ccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 275  Q
    || |||||||||||||  | ||| | |||||||||||||||||| ||||||    
T  28842281 ccatcgtgccacgattcctacag-atcctgattttaagttaactttcacaa 28842232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 47177327 - 47177253
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||| |||||||||||||    
T  47177327 tacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctacttaaaatctgtaacaaatctg 47177253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 47179678 - 47179604
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||| |||||||||||||    
T  47179678 tacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctacttaaaatctgtaacaaatctg 47179604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 134 - 274
Target Start/End: Complemental strand, 15823426 - 15823286
Alignment:
Q  134 caccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgt 232  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||| ||| ||  |||  | |||||||| |||||||| ||  |||||||| ||||    
T  15823426 caccatcgtgccacgatgcgaccccatcgtgccacgatttttctagtgctttg-cctcaaacttgaaacctccaatcgtgccacgttgcccagccatcgt 15823328  T
Q  233 gccacgatt-gtgcagaaacctgattttaagttaactctcaca 274  Q
    |||||||||  ||||| | ||||||||||||||||||||||||    
T  15823327 gccacgattcctgcag-atcctgattttaagttaactctcaca 15823286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 16226136 - 16226062
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||| ||| |||| |||||||||||||    
T  16226136 tacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctacttaaaatctgtaacaaatctg 16226062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 169 - 274
Target Start/End: Complemental strand, 20291386 - 20291280
Alignment:
Q  169 gatttttccagtgccttgcc-caaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaac 267  Q
    ||||||||||||||| |||| ||||||||| ||||||||| |||||| ||  |||  ||| ||||||||||||| |||||||| ||||||||||||||||    
T  20291386 gatttttccagtgccatgcctcaaaaaactgaaacctccaccgtgccacgttgccttgccatcgtgccacgattctgcagaaatctgattttaagttaac 20291287  T
Q  268 tctcaca 274  Q
    |||||||    
T  20291286 tctcaca 20291280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 418
Target Start/End: Original strand, 7910902 - 7911027
Alignment:
Q  294 ggaatagcatggaacatgatggaatctattccatcccataccaccatctttctcta-ttttcattccccccaatttgggaggtatgcaatggaatggaac 392  Q
    ||||| |||||||||||||||||||  |||||||||||||| ||| | || ||||| ||||||||||  |||| ||||  |||||||||||||||||||     
T  7910902 ggaatggcatggaacatgatggaatgcattccatcccatacaacccttttactctatttttcattccttccaaattggagggtatgcaatggaatggaat 7911001  T
Q  393 cacttaattctattattactctttta 418  Q
    | |||||||  || ||||||||||||    
T  7911002 ctcttaattagataattactctttta 7911027  T

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Target: chr1; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 23473787 - 23473907
Alignment:
Q  282 taaaaattggacggaatagcatggaacatgatggaatctattccatcccataccaccatct-ttctctattttcattccccccaatttgggaggtatgca 380  Q
    ||||||||| | ||||| | |||||||||||||||||| |||||||||||||||| |||||  |||   ||||||||||| |||||||| ||||||| ||    
T  23473787 taaaaattgaatggaatggaatggaacatgatggaatccattccatcccataccatcatctactcttgtttttcattccctccaatttgtgaggtataca 23473886  T
Q  381 atggaatggaaccacttaatt 401  Q
    ||||||||  || ||||||||    
T  23473887 atggaatgatacaacttaatt 23473907  T

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Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 16231514 - 16231462
Alignment:
Q  80 aaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagc 132  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||||||||||    
T  16231514 aaaatctgtaacaaatctgcacccaaaaatatgttttatttttatccgccagc 16231462  T

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Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 13449919 - 13449996
Alignment:
Q  104 aaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtg 181  Q
    ||||||||||||||||||||||  ||| | |||||||||| |||||| ||| || ||| || ||||||||||||||||    
T  13449919 aaaaatacgttttatttttatctaccatcgcaccatcgtggcacgattcgatccaatcgtggcacgatttttccagtg 13449996  T

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Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 30790749 - 30790848
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| |  |||||||||||| | |||||  || ||||| ||||||||||||||  ||||| |||||| ||||||| ||||||||||| |||||    
T  30790749 aacaaatctgcactgaaaaatacgtttatgtttttcccctccagcgcaccatcgtgccacattgcgatcccatcgtgccacgttttttccagtgacttgc 30790848  T

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Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 241
Target Start/End: Complemental strand, 13215007 - 13214854
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttttatttttatcc-gccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||||  || | | | |||| ||||||||||||||||| ||| | |||||| ||||||||    ||||||| ||||     
T  13215007 aacaaatctgcacccaaaaatacgtttttgttatttgctgccaacacaccatcgtgccacgttgcaatcccatcatgccacgaaaaatccagtgacttg- 13214909  T
Q  188 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgatt 241  Q
    ||  |||||| |||||||| |||||||| ||  ||||| || |||||||||||||    
T  13214908 cctcaaaactgaaacctccaatcgtgccacgttgcccaaccatcgtgccacgatt 13214854  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 28207421 - 28207500
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgcca 167  Q
    ||||||||||| |||||||| |||||| | || ||  |||||||| ||||||||||||||| || ||||||||| |||||    
T  28207421 aacaaatctgcacccaaaaaaacgtttatgttattcgccgccagcgcaccatcgtgccacgttgtgaccccatcgtgcca 28207500  T

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Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 388
Target Start/End: Complemental strand, 30190846 - 30190811
Alignment:
Q  353 tcattccccccaatttgggaggtatgcaatggaatg 388  Q
    ||||||||||||||||||||||||| ||||||||||    
T  30190846 tcattccccccaatttgggaggtatccaatggaatg 30190811  T

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Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 50139643 - 50139554
Alignment:
Q  302 atggaacatgatggaatctattccatcccataccaccatctttctcta--ttttcattccccccaatttgggaggtatgcaatggaatgga 390  Q
    |||||| | ||||||||| ||||||||| ||||||||| ||| ||||   |||| |||||  ||||||||||| |||||||||||||||||    
T  50139643 atggaataagatggaatccattccatcctataccacca-cttcctcttattttttattccatccaatttgggatgtatgcaatggaatgga 50139554  T

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Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 50109082 - 50108993
Alignment:
Q  302 atggaacatgatggaatctattccatcccata--ccaccatctttctctattt-tcattccccccaatttgggaggtatgcaatggaatg 388  Q
    |||||||||||||||||| |||||||||||||  ||||| ||| |  | |||| ||||| ||| |||||||||  |||||||||||||||    
T  50109082 atggaacatgatggaatccattccatcccatataccaccctctcttccaatttatcatttccctcaatttggggtgtatgcaatggaatg 50108993  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13215050 - 13214997
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  13215050 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 13214997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13761806 - 13761753
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  13761806 tacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 13761753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15823515 - 15823462
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  15823515 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 15823462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 275
Target Start/End: Complemental strand, 16228268 - 16228235
Alignment:
Q  242 gtgcagaaacctgattttaagttaactctcacaa 275  Q
    ||||||||||||||||||||||||||||| ||||    
T  16228268 gtgcagaaacctgattttaagttaactcttacaa 16228235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28207378 - 28207431
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  28207378 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 28207431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28840647 - 28840594
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  28840647 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 28840594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41646889 - 41646836
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  41646889 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 41646836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 51750008 - 51749955
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  51750008 tacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 51749955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 51752334 - 51752281
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  51752334 tacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 51752281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 161; Significance: 1e-85; HSPs: 2)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 86 - 274
Target Start/End: Complemental strand, 6115 - 5927
Alignment:
Q  86 tgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgcctt 185  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  6115 tgtaacaaatctgcacccaaaaatatgttttatttttatccgccagcgcaccatcgtgccatgatgagaccccatcatgccacgatttttccagtgcctt 6016  T
Q  186 gcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6015 gcctaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 5927  T

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Target: scaffold0472; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6177 - 6103
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgtaacaaatctg 75  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  6177 tacaaggtctatatttatagtaaaagtcctgcttaaaaactgtaacaaatctgctttaaatttgtaacaaatctg 6103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 143; Significance: 6e-75; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 88 - 274
Target Start/End: Original strand, 12868 - 13054
Alignment:
Q  88 taacaaatctgctcccaaaaatacgttttatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  12868 taacaaatctgctcccaaaaatacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 12967  T
Q  188 ccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 274  Q
    ||||||||||||||||||||||||||| ||  |||  | | ||||||||||||| ||||||||||||||||||||||||||||||||    
T  12968 ccaaaaaactaaaacctccatcgtgccacgttgccttgacatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 13054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 127 - 275
Target Start/End: Original strand, 69686 - 69834
Alignment:
Q  127 gccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccgcgaagcccag 225  Q
    |||||||||||||||||| ||||||||| |||||  ||| |||||||||||||||| ||| ||  |||  | |||||||| |||||||| ||  ||| ||    
T  69686 gccagcacaccatcgtgcaacgatgcgatcccattgtgctacgatttttccagtgctttg-cctcaaacttgaaacctccaatcgtgccacgttgcctag 69784  T
Q  226 ccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    || ||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  69785 ccatcgtgccacgattctgcagaaatctgattttaagttaactcttacaa 69834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 73427 - 73545
Alignment:
Q  157 ccatcctgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctga 255  Q
    ||||| |||||| ||||||||||||| |||||  |||   | ||||||||| ||||||| ||  ||| |||| ||||||||||||| |||| ||| ||||    
T  73427 ccatcgtgccacaatttttccagtgctttgcctcaaact-tgaaacctccaatcgtgccacgttgcctagccatcgtgccacgattctgcataaatctga 73525  T
Q  256 ttttaagttaactctcacaa 275  Q
    ||||||||||||||| ||||    
T  73526 ttttaagttaactcttacaa 73545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 86 - 183
Target Start/End: Complemental strand, 29099 - 29001
Alignment:
Q  86 tgtaacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgcc 183  Q
    |||||||||||||| | |||||||| |||| | |||||  | |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29099 tgtaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 29001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 28995 - 28940
Alignment:
Q  220 gcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacaa 275  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  28995 gcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcacaa 28940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29139 - 29086
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||  |||||||||| | ||||||||||||    
T  29139 tacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgc 29086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 89 - 275
Target Start/End: Complemental strand, 2815 - 2628
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| ||||||||||||||| | || ||  | |||||| ||||||||||||||||||||| |||||| |||||||||||||||||| |||||     
T  2815 aacaaatctgcacccaaaaatacgtttatgttattcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtaccttg- 2717  T
Q  188 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgatt-gtgcagaaacctgattttaagttaactctcacaa 275  Q
    ||  |||||| |||||||| |||||||| ||  ||| |||  ||||| ||| |||  ||||| | | |||||||||||||||||||||||    
T  2716 cctcaaaactgaaacctccaatcgtgccacgttgcctagcaatcgtgtcacaattcctgcag-atcttgattttaagttaactctcacaa 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 387
Target Start/End: Complemental strand, 9294 - 9216
Alignment:
Q  309 atgatggaatctattccatcccataccaccatctttctct-attttcattccccccaatttgggaggtatgcaatggaat 387  Q
    ||||||||||| ||||||||| || |||||| ||| |||| |||||||||||  ||||||||||||||||||||||||||    
T  9294 atgatggaatccattccatcctatgccacca-cttcctcttattttcattccatccaatttgggaggtatgcaatggaat 9216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 392
Target Start/End: Original strand, 57013 - 57055
Alignment:
Q  350 ttttcattccccccaatttgggaggtatgcaatggaatggaac 392  Q
    |||||||||||||||| ||||||||||| ||||||||||||||    
T  57013 ttttcattccccccaaattgggaggtatccaatggaatggaac 57055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3975 - 3922
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||  |||||||||| |  |||||||||||    
T  3975 tacaaggtctatatttatagtaaaagtattgcttaaaatttgaaacaaatctgc 3922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 273
Target Start/End: Complemental strand, 14954 - 14768
Alignment:
Q  89 aacaaatctgctcccaaaaatacgttt-tatttttatccgccagcacaccatcgtgccacgatgcgaccccatcctgccacgatttttccagtgccttgc 187  Q
    ||||||||||| |||||||||| |||| | || ||  | |||||| |||||||||| |||| || || |||||| ||||||||  ||||||||| |||||    
T  14954 aacaaatctgcacccaaaaatatgtttctgttattcgctgccagcgcaccatcgtgtcacgttgtgatcccatcgtgccacgaaatttccagtgacttgc 14855  T
Q  188 ccaaaaaactaaaacctcc-atcgtgccgcgaagcccagccgtcgtgccacgattg-tgcagaaacctgattttaagttaactctcac 273  Q
    |  | || || |||| ||| ||||| || ||  ||||  |  |||||||||||||  ||||||| |||||||||||||||||||||||    
T  14854 ctcataa-ctgaaacttcccatcgttccacgttgcccttcaatcgtgccacgattcctgcagaatcctgattttaagttaactctcac 14768  T

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Target: scaffold0131; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14997 - 14944
Alignment:
Q  1 tacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 54  Q
    |||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  14997 tacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 14944  T

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Target: scaffold0097 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 388
Target Start/End: Complemental strand, 21465 - 21430
Alignment:
Q  353 tcattccccccaatttgggaggtatgcaatggaatg 388  Q
    ||||||||||||||||||||||||| ||||||||||    
T  21465 tcattccccccaatttgggaggtatccaatggaatg 21430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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