View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7706_low_9 (Length: 414)

Name: NF7706_low_9
Description: NF7706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7706_low_9
NF7706_low_9
[»] chr4 (75 HSPs)
chr4 (153-406)||(44145842-44146095)
chr4 (86-276)||(43961449-43961644)
chr4 (45-279)||(17182490-17182731)
chr4 (49-278)||(55080581-55080815)
chr4 (45-273)||(22186717-22186950)
chr4 (47-251)||(37761465-37761673)
chr4 (47-276)||(56135749-56135965)
chr4 (47-251)||(7977530-7977741)
chr4 (49-251)||(47846090-47846298)
chr4 (45-251)||(54576362-54576575)
chr4 (68-231)||(29993826-29993994)
chr4 (82-231)||(4437480-4437633)
chr4 (45-231)||(5824899-5825085)
chr4 (47-230)||(51329796-51329983)
chr4 (106-230)||(54001162-54001289)
chr4 (330-406)||(44155976-44156052)
chr4 (47-247)||(21694929-21695132)
chr4 (95-240)||(34995099-34995247)
chr4 (45-118)||(44145771-44145844)
chr4 (47-136)||(49735468-49735557)
chr4 (104-217)||(9030272-9030391)
chr4 (47-112)||(31348500-31348565)
chr4 (49-130)||(54576329-54576410)
chr4 (45-116)||(54935244-54935315)
chr4 (47-140)||(54935067-54935161)
chr4 (43-116)||(54320609-54320682)
chr4 (45-129)||(37711285-37711369)
chr4 (45-113)||(46007879-46007947)
chr4 (40-92)||(49735691-49735743)
chr4 (145-279)||(11089619-11089756)
chr4 (49-136)||(27735900-27735987)
chr4 (45-140)||(35543448-35543543)
chr4 (42-177)||(45132610-45132744)
chr4 (68-158)||(51074362-51074459)
chr4 (137-215)||(14539367-14539445)
chr4 (45-260)||(47433734-47433955)
chr4 (51-211)||(55510173-55510338)
chr4 (47-116)||(6938422-6938491)
chr4 (47-229)||(17938164-17938352)
chr4 (45-114)||(37761641-37761710)
chr4 (62-130)||(21694905-21694973)
chr4 (51-178)||(27735749-27735881)
chr4 (270-330)||(44156147-44156207)
chr4 (49-137)||(47846417-47846505)
chr4 (47-168)||(29798288-29798410)
chr4 (47-89)||(41174547-41174589)
chr4 (163-213)||(51075218-51075268)
chr4 (82-176)||(41227518-41227614)
chr4 (47-88)||(53260718-53260759)
chr4 (45-109)||(16400798-16400862)
chr4 (45-115)||(26166935-26167005)
chr4 (47-116)||(1968534-1968603)
chr4 (47-92)||(37711138-37711183)
chr4 (47-116)||(45742065-45742134)
chr4 (50-114)||(4437428-4437492)
chr4 (50-130)||(29993774-29993854)
chr4 (45-116)||(31348314-31348390)
chr4 (45-101)||(35565556-35565612)
chr4 (45-101)||(47694347-47694403)
chr4 (45-92)||(5730828-5730875)
chr4 (49-100)||(24995216-24995267)
chr4 (45-116)||(34995224-34995295)
chr4 (45-116)||(45741888-45741959)
chr4 (49-115)||(2247977-2248043)
chr4 (72-129)||(7977520-7977578)
chr4 (182-260)||(35543333-35543411)
chr4 (47-129)||(55510331-55510412)
chr4 (45-79)||(56135933-56135967)
chr4 (47-116)||(24565346-24565415)
chr4 (50-90)||(5731032-5731072)
chr4 (47-115)||(5825072-5825140)
chr4 (194-270)||(11842325-11842401)
chr4 (46-114)||(23332709-23332777)
chr4 (87-131)||(32192847-32192891)
chr4 (47-87)||(54320435-54320475)
[»] chr5 (56 HSPs)
chr5 (47-251)||(10204576-10204785)
chr5 (47-251)||(15986659-15986868)
chr5 (47-276)||(40305670-40305909)
chr5 (49-276)||(8551427-8551660)
chr5 (47-251)||(33744228-33744437)
chr5 (49-251)||(34980812-34981019)
chr5 (67-251)||(10043272-10043461)
chr5 (45-230)||(21580945-21581135)
chr5 (82-201)||(5688448-5688572)
chr5 (49-136)||(1657968-1658055)
chr5 (137-240)||(6382422-6382525)
chr5 (47-136)||(14245088-14245177)
chr5 (45-117)||(10476202-10476274)
chr5 (48-120)||(13634882-13634954)
chr5 (45-115)||(10204752-10204822)
chr5 (47-116)||(7544136-7544205)
chr5 (47-112)||(13634711-13634776)
chr5 (52-136)||(36363187-36363271)
chr5 (89-231)||(6597845-6597984)
chr5 (47-211)||(11436939-11437108)
chr5 (45-131)||(14245206-14245292)
chr5 (139-240)||(10043055-10043156)
chr5 (39-92)||(16938471-16938524)
chr5 (47-116)||(26414893-26414962)
chr5 (45-114)||(33744191-33744260)
chr5 (45-114)||(34980987-34981056)
chr5 (45-129)||(15858902-15858986)
chr5 (51-110)||(2550533-2550592)
chr5 (46-137)||(14684638-14684729)
chr5 (45-136)||(15986622-15986713)
chr5 (137-215)||(12036007-12036084)
chr5 (45-87)||(40305668-40305710)
chr5 (54-118)||(10043425-10043489)
chr5 (49-92)||(7544335-7544378)
chr5 (45-91)||(5688590-5688636)
chr5 (50-92)||(11757102-11757144)
chr5 (47-129)||(12035936-12036018)
chr5 (50-88)||(21581150-21581188)
chr5 (47-116)||(8502835-8502904)
chr5 (47-92)||(16938678-16938723)
chr5 (47-229)||(28279533-28279721)
chr5 (93-129)||(6382357-6382393)
chr5 (47-111)||(10476026-10476090)
chr5 (47-87)||(20147074-20147114)
chr5 (45-116)||(10650589-10650660)
chr5 (45-131)||(2183974-2184060)
chr5 (45-119)||(11756876-11756949)
chr5 (45-79)||(22023571-22023605)
chr5 (45-111)||(37551585-37551651)
chr5 (45-111)||(37654415-37654481)
chr5 (45-136)||(11437094-11437188)
chr5 (49-116)||(16501966-16502034)
chr5 (47-91)||(18199528-18199572)
chr5 (45-85)||(37607100-37607140)
chr5 (45-85)||(37779309-37779349)
chr5 (47-115)||(40815297-40815365)
[»] chr8 (49 HSPs)
chr8 (47-251)||(12022178-12022387)
chr8 (82-279)||(39449339-39449546)
chr8 (47-240)||(8815187-8815385)
chr8 (47-251)||(43732679-43732896)
chr8 (45-251)||(30365128-30365339)
chr8 (49-229)||(16024155-16024341)
chr8 (50-276)||(20472702-20472933)
chr8 (47-255)||(9933240-9933454)
chr8 (48-210)||(43826333-43826500)
chr8 (71-248)||(34196332-34196514)
chr8 (45-229)||(8671849-8672040)
chr8 (47-208)||(9434377-9434543)
chr8 (47-216)||(40633059-40633232)
chr8 (50-214)||(6453185-6453356)
chr8 (51-137)||(7394615-7394701)
chr8 (45-130)||(43732848-43732933)
chr8 (45-130)||(12022140-12022226)
chr8 (45-116)||(2248450-2248521)
chr8 (154-216)||(29937614-29937676)
chr8 (45-130)||(8815139-8815224)
chr8 (45-114)||(31543249-31543318)
chr8 (47-116)||(34634318-34634387)
chr8 (53-140)||(36308994-36309081)
chr8 (47-116)||(1027023-1027092)
chr8 (47-116)||(31543072-31543141)
chr8 (45-102)||(40632994-40633051)
chr8 (47-115)||(30365306-30365374)
chr8 (43-129)||(31738585-31738671)
chr8 (45-107)||(34196492-34196553)
chr8 (71-116)||(30581988-30582033)
chr8 (47-92)||(41103504-41103549)
chr8 (47-119)||(9718651-9718723)
chr8 (50-130)||(16024315-16024394)
chr8 (53-116)||(1281149-1281212)
chr8 (45-84)||(3726861-3726900)
chr8 (45-87)||(2481977-2482019)
chr8 (45-114)||(7503131-7503200)
chr8 (47-136)||(24243050-24243137)
chr8 (51-136)||(30479721-30479806)
chr8 (45-116)||(7979138-7979209)
chr8 (45-92)||(11785725-11785772)
chr8 (50-216)||(24243118-24243287)
chr8 (45-115)||(2412962-2413027)
chr8 (47-112)||(13404976-13405041)
chr8 (139-200)||(38198135-38198196)
chr8 (47-79)||(9718489-9718521)
chr8 (45-112)||(11033417-11033482)
chr8 (51-115)||(11575582-11575646)
chr8 (139-183)||(27487087-27487131)
[»] chr7 (56 HSPs)
chr7 (47-251)||(33519048-33519257)
chr7 (47-216)||(37925841-37926015)
chr7 (47-251)||(36267588-36267797)
chr7 (45-260)||(39646467-39646687)
chr7 (45-231)||(28074158-28074354)
chr7 (67-279)||(48013523-48013740)
chr7 (14-129)||(48881525-48881640)
chr7 (49-251)||(37620776-37620983)
chr7 (50-256)||(21857350-21857560)
chr7 (45-222)||(8122142-8122328)
chr7 (50-246)||(35421967-35422168)
chr7 (82-251)||(48881593-48881768)
chr7 (50-251)||(31364080-31364285)
chr7 (48-194)||(12670928-12671079)
chr7 (67-229)||(48015230-48015394)
chr7 (138-276)||(23116269-23116408)
chr7 (45-116)||(36267551-36267622)
chr7 (103-212)||(3215934-3216048)
chr7 (48-161)||(12682854-12682972)
chr7 (49-214)||(16833684-16833867)
chr7 (93-231)||(3143526-3143673)
chr7 (45-115)||(33519224-33519294)
chr7 (47-116)||(39856040-39856109)
chr7 (45-140)||(18795746-18795840)
chr7 (47-130)||(28074103-28074186)
chr7 (47-120)||(18231757-18231830)
chr7 (45-122)||(41496955-41497032)
chr7 (47-115)||(4833531-4833599)
chr7 (151-247)||(30592292-30592388)
chr7 (45-140)||(47390853-47390948)
chr7 (45-131)||(40196530-40196616)
chr7 (47-119)||(1051670-1051742)
chr7 (47-115)||(30592253-30592321)
chr7 (48-116)||(31571645-31571713)
chr7 (63-127)||(48147404-48147468)
chr7 (137-240)||(2087785-2087892)
chr7 (45-107)||(31553183-31553243)
chr7 (45-178)||(33655216-33655354)
chr7 (47-140)||(13771097-13771190)
chr7 (45-129)||(13770946-13771030)
chr7 (43-91)||(25887188-25887236)
chr7 (47-90)||(47391057-47391100)
chr7 (47-116)||(4835479-4835548)
chr7 (137-278)||(17852966-17853106)
chr7 (45-113)||(40282195-40282263)
chr7 (47-115)||(48015383-48015451)
chr7 (47-118)||(25887366-25887436)
chr7 (76-178)||(41497065-41497172)
chr7 (72-130)||(31364070-31364128)
chr7 (68-130)||(37926002-37926064)
chr7 (53-114)||(37620951-37621012)
chr7 (45-82)||(41008387-41008424)
chr7 (47-115)||(13425120-13425188)
chr7 (47-79)||(17853072-17853104)
chr7 (49-101)||(23116418-23116470)
chr7 (82-130)||(39646630-39646678)
[»] scaffold0095 (1 HSPs)
scaffold0095 (82-279)||(8182-8390)
[»] chr1 (51 HSPs)
chr1 (45-251)||(1085524-1085736)
chr1 (45-274)||(33643266-33643499)
chr1 (47-231)||(35927814-35928001)
chr1 (50-251)||(40709327-40709532)
chr1 (75-279)||(47071079-47071288)
chr1 (96-250)||(25268313-25268472)
chr1 (84-231)||(2506576-2506728)
chr1 (77-209)||(51303461-51303600)
chr1 (45-255)||(525133-525346)
chr1 (47-130)||(51303384-51303467)
chr1 (90-277)||(1344592-1344783)
chr1 (154-251)||(35512909-35513006)
chr1 (51-114)||(35512974-35513037)
chr1 (55-216)||(13386989-13387163)
chr1 (45-136)||(38509892-38509983)
chr1 (55-140)||(23536839-23536924)
chr1 (82-216)||(40287325-40287467)
chr1 (47-199)||(17622536-17622694)
chr1 (45-216)||(20607221-20607390)
chr1 (45-116)||(40094931-40095002)
chr1 (47-116)||(12234010-12234079)
chr1 (45-168)||(30010330-30010458)
chr1 (45-116)||(41498579-41498651)
chr1 (49-116)||(12234185-12234252)
chr1 (45-116)||(32951493-32951564)
chr1 (54-116)||(2859107-2859169)
chr1 (46-115)||(2858931-2859000)
chr1 (47-92)||(20607416-20607461)
chr1 (47-116)||(30010507-30010576)
chr1 (93-201)||(52707691-52707803)
chr1 (47-119)||(41498404-41498476)
chr1 (55-194)||(50079476-50079620)
chr1 (45-116)||(35349637-35349708)
chr1 (47-116)||(1085489-1085559)
chr1 (47-92)||(26324014-26324059)
chr1 (45-118)||(40709290-40709363)
chr1 (45-137)||(2470728-2470820)
chr1 (51-111)||(35512638-35512694)
chr1 (49-115)||(2506715-2506781)
chr1 (50-116)||(38510069-38510135)
chr1 (51-116)||(8529974-8530039)
chr1 (45-90)||(20576131-20576176)
chr1 (55-116)||(25268439-25268500)
chr1 (45-116)||(7444476-7444547)
chr1 (45-115)||(28770897-28770967)
chr1 (47-116)||(35349466-35349533)
chr1 (45-82)||(26941042-26941079)
chr1 (51-167)||(51597672-51597793)
chr1 (50-130)||(7444656-7444736)
chr1 (137-197)||(44210994-44211054)
chr1 (67-115)||(49832567-49832615)
[»] chr6 (47 HSPs)
chr6 (45-216)||(15353362-15353537)
chr6 (45-216)||(15323223-15323399)
chr6 (47-230)||(9051590-9051776)
chr6 (45-251)||(10293248-10293457)
chr6 (47-161)||(23090995-23091114)
chr6 (45-249)||(31798916-31799128)
chr6 (87-212)||(26318345-26318475)
chr6 (47-216)||(4097305-4097480)
chr6 (45-178)||(4097620-4097759)
chr6 (47-114)||(30487306-30487373)
chr6 (137-240)||(3841180-3841284)
chr6 (146-216)||(15373669-15373739)
chr6 (48-141)||(10818366-10818459)
chr6 (47-251)||(10818229-10818425)
chr6 (50-116)||(19278213-19278278)
chr6 (55-116)||(23091133-23091195)
chr6 (137-231)||(25468454-25468548)
chr6 (47-116)||(14515473-14515542)
chr6 (146-251)||(34176606-34176711)
chr6 (50-114)||(26318482-26318546)
chr6 (67-131)||(34177060-34177124)
chr6 (92-131)||(15373737-15373776)
chr6 (47-136)||(665841-665929)
chr6 (47-116)||(9721138-9721207)
chr6 (45-114)||(12811157-12811226)
chr6 (45-129)||(14515633-14515717)
chr6 (138-178)||(28477076-28477116)
chr6 (138-178)||(29692974-29693014)
chr6 (98-141)||(5287471-5287514)
chr6 (45-92)||(9298690-9298737)
chr6 (50-116)||(9719034-9719100)
chr6 (50-116)||(30487480-30487546)
chr6 (47-116)||(33236125-33236194)
chr6 (48-144)||(9719178-9719273)
chr6 (55-115)||(10293424-10293484)
chr6 (47-122)||(1300789-1300864)
chr6 (47-130)||(3841247-3841330)
chr6 (50-120)||(5585304-5585375)
chr6 (52-115)||(19278039-19278102)
chr6 (67-118)||(34176591-34176642)
chr6 (47-129)||(4097235-4097317)
chr6 (45-87)||(31799131-31799173)
chr6 (45-111)||(31849108-31849174)
chr6 (82-136)||(31849265-31849319)
chr6 (47-115)||(16738172-16738239)
chr6 (47-79)||(21606854-21606886)
chr6 (49-81)||(33041662-33041694)
[»] chr2 (55 HSPs)
chr2 (47-230)||(31061359-31061547)
chr2 (47-231)||(45257307-45257496)
chr2 (45-240)||(42296349-42296549)
chr2 (48-230)||(1052811-1053000)
chr2 (47-216)||(34187575-34187751)
chr2 (54-209)||(31928121-31928286)
chr2 (55-209)||(33265615-33265773)
chr2 (49-212)||(3094427-3094595)
chr2 (47-213)||(2381060-2381231)
chr2 (81-216)||(15085770-15085911)
chr2 (96-228)||(45098218-45098355)
chr2 (96-229)||(35325316-35325456)
chr2 (47-169)||(1270394-1270522)
chr2 (45-161)||(17333936-17334058)
chr2 (47-136)||(23748250-23748339)
chr2 (143-255)||(36052118-36052230)
chr2 (47-113)||(35736365-35736431)
chr2 (45-116)||(22356179-22356250)
chr2 (47-130)||(42813781-42813864)
chr2 (139-216)||(8554369-8554446)
chr2 (98-170)||(22356016-22356093)
chr2 (138-243)||(9313079-9313188)
chr2 (47-178)||(15224802-15224938)
chr2 (82-213)||(21502067-21502204)
chr2 (45-116)||(887285-887355)
chr2 (45-112)||(35736173-35736240)
chr2 (45-116)||(36347716-36347787)
chr2 (148-250)||(42813726-42813828)
chr2 (49-114)||(8426881-8426946)
chr2 (47-171)||(41778773-41778902)
chr2 (45-92)||(17379844-17379891)
chr2 (45-116)||(45257482-45257553)
chr2 (49-178)||(16713494-16713628)
chr2 (51-160)||(23739882-23739996)
chr2 (50-116)||(31795772-31795838)
chr2 (47-116)||(9631735-9631804)
chr2 (67-177)||(886938-887051)
chr2 (45-111)||(2380990-2381057)
chr2 (82-141)||(14196819-14196878)
chr2 (49-116)||(36046377-36046443)
chr2 (49-115)||(9426987-9427053)
chr2 (84-130)||(33265767-33265813)
chr2 (45-90)||(15224143-15224188)
chr2 (47-116)||(36347541-36347610)
chr2 (48-116)||(36046205-36046273)
chr2 (50-85)||(6721675-6721710)
chr2 (45-96)||(8554446-8554497)
chr2 (43-86)||(16713730-16713773)
chr2 (49-140)||(40022524-40022615)
chr2 (47-89)||(17380043-17380085)
chr2 (137-251)||(31795804-31795918)
chr2 (44-171)||(21662324-21662457)
chr2 (193-249)||(14187111-14187167)
chr2 (180-212)||(22356141-22356173)
chr2 (43-79)||(23748101-23748137)
[»] chr3 (53 HSPs)
chr3 (86-275)||(40858604-40858798)
chr3 (47-276)||(41414078-41414313)
chr3 (82-251)||(34641027-34641199)
chr3 (53-249)||(16884010-16884209)
chr3 (82-276)||(48683647-48683848)
chr3 (53-231)||(10943669-10943852)
chr3 (51-231)||(17474261-17474446)
chr3 (50-228)||(21090129-21090312)
chr3 (47-209)||(44412361-44412528)
chr3 (77-251)||(26135827-26136006)
chr3 (47-231)||(24253721-24253911)
chr3 (49-260)||(42772046-42772250)
chr3 (67-247)||(18086019-18086210)
chr3 (88-250)||(8432297-8432462)
chr3 (82-209)||(46978462-46978594)
chr3 (82-229)||(42699669-42699821)
chr3 (47-130)||(34641151-34641234)
chr3 (49-130)||(44412522-44412603)
chr3 (47-201)||(27197734-27197893)
chr3 (45-130)||(24253883-24253968)
chr3 (45-140)||(220548-220643)
chr3 (45-116)||(28582684-28582755)
chr3 (47-140)||(24560217-24560310)
chr3 (112-215)||(36727242-36727349)
chr3 (49-129)||(26135959-26136039)
chr3 (45-120)||(25654969-25655043)
chr3 (45-127)||(5961933-5962014)
chr3 (45-115)||(24560393-24560463)
chr3 (167-283)||(54985696-54985812)
chr3 (45-112)||(25499074-25499141)
chr3 (49-116)||(41110323-41110390)
chr3 (47-276)||(30200098-30200339)
chr3 (50-115)||(28581189-28581254)
chr3 (45-90)||(36568902-36568947)
chr3 (155-216)||(55428492-55428553)
chr3 (51-116)||(55428554-55428619)
chr3 (47-107)||(8432261-8432321)
chr3 (192-280)||(37102155-37102243)
chr3 (52-115)||(14897981-14898044)
chr3 (45-92)||(18654598-18654645)
chr3 (49-116)||(23028101-23028168)
chr3 (49-116)||(52474090-52474157)
chr3 (51-85)||(10748299-10748333)
chr3 (45-79)||(30200096-30200130)
chr3 (44-85)||(14897892-14897933)
chr3 (53-114)||(27541937-27541998)
chr3 (45-82)||(37102348-37102385)
chr3 (47-116)||(41110496-41110565)
chr3 (45-82)||(42772231-42772268)
chr3 (50-90)||(18654802-18654842)
chr3 (47-79)||(37102159-37102191)
chr3 (45-81)||(41039948-41039984)
chr3 (52-116)||(52473920-52473984)
[»] scaffold0026 (2 HSPs)
scaffold0026 (47-216)||(1467-1642)
scaffold0026 (50-131)||(1175-1256)
[»] scaffold0119 (2 HSPs)
scaffold0119 (47-231)||(37383-37572)
scaffold0119 (47-169)||(30715-30843)
[»] scaffold0071 (1 HSPs)
scaffold0071 (93-281)||(52932-53122)
[»] scaffold0007 (2 HSPs)
scaffold0007 (137-251)||(242311-242425)
scaffold0007 (46-130)||(242377-242461)
[»] scaffold0012 (2 HSPs)
scaffold0012 (82-231)||(184636-184796)
scaffold0012 (51-114)||(184784-184847)
[»] scaffold1414 (1 HSPs)
scaffold1414 (102-213)||(355-473)
[»] scaffold0198 (1 HSPs)
scaffold0198 (50-115)||(3150-3215)
[»] scaffold0067 (2 HSPs)
scaffold0067 (47-140)||(39341-39434)
scaffold0067 (45-116)||(39184-39256)
[»] scaffold0240 (2 HSPs)
scaffold0240 (142-231)||(17640-17729)
scaffold0240 (47-115)||(17716-17782)
[»] scaffold0096 (1 HSPs)
scaffold0096 (45-115)||(6582-6652)
[»] scaffold0262 (1 HSPs)
scaffold0262 (47-120)||(16296-16369)
[»] scaffold0006 (1 HSPs)
scaffold0006 (151-199)||(81498-81546)


Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 153 - 406
Target Start/End: Original strand, 44145842 - 44146095
Alignment:
Q  153 gaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcct 252  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44145842 gaagtattacatgatcatttataatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcct 44145941  T
Q  253 aaaccctcttcccaaacacacccttaataaagtaagtcaaaaagaattaatataagtaattaaaagtagtactatcatgtatctacttttcattcatatt 352  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44145942 aaaccctctttccaaatacacccttaataaagtaagtcaaaaagaattaatataagtaattaaaggtagtactatcatgtatctacttttcattcatatt 44146041  T
Q  353 ccacattctattgatcttaccaactttcttgtgaattctcgtagcttaagactt 406  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44146042 ccacattctattgatcttaccaactttcttgtgaattctcttagcttaagactt 44146095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 86 - 276
Target Start/End: Original strand, 43961449 - 43961644
Alignment:
Q  86 gggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgct 180  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||     ||||||||||||||||||||| ||||||||| |||||| |    
T  43961449 gggagggctcacttttattttttaaattatgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 43961548  T
Q  181 gttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaacacaccct 276  Q
    | |||||||||||| ||||||||||||||||||||   ||| ||||||||| ||  |||||||||||||| ||| |||||   |||||||||||||    
T  43961549 gataattcaattttctaaaaatcattttataatgttcataatttaaaaaagaaaaataagccctcccctcataatccctccatccaaacacaccct 43961644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 45 - 279
Target Start/End: Complemental strand, 17182731 - 17182490
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 139  Q
    ||||||||||||||||| ||| ||||| |||||||| ||| |||||| || |||||||||||||||||||||||||| ||||||| | ||||     |||    
T  17182731 ttagggtgtgtttggattgagggtttatgaggggaaaggaagggaggacttacttttattttttaaattacgaacaaggtaaaatatttttttaaaataa 17182632  T
Q  140 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttt--taaaaatcattttataatgtctttaaattaaaaaaggaatgt 237  Q
    |||||||||||||||||||||| ||||||||| |||||  ||||||||||||||||   |||||||||||||||| |||  ||| ||||||||| || ||    
T  17182631 attaagtgtttttgaagtattatatgatcatttatcatattgttaattcaatttttgcaaaaaatcattttataacgtcaataatttaaaaaagaaaagt 17182532  T
Q  238 aagccctcccctcctaaaccctcttcccaaacacacccttaa 279  Q
    ||  | |||||||||||| |||||  ||||||||||| ||||    
T  17182531 aaatcttcccctcctaaaacctctatccaaacacacctttaa 17182490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 49 - 278
Target Start/End: Original strand, 55080581 - 55080815
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----tta 143  Q
    ||||||||||||| ||| ||||||||| ||||| |||| || || ||| ||||||||| |||||||||||||||||||||||| |||| |||     |||    
T  55080581 ggtgtgtttggattgagggtttaggagaggaagagaggagatggttcatttttattttgtaaattacgaacaatgtaaaatgttttttcaaaataagtta 55080680  T
Q  144 agtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccc 243  Q
    |||||||||||||||||  ||||||||| |||||| |||||||| |||||| ||||||| ||||||||||||   ||| ||||||||| || ||||| ||    
T  55080681 agtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgttcgtaatttaaaaaagaaaagtaagtcc 55080780  T
Q  244 tcccctcctaaaccctcttcccaaacacaccctta 278  Q
    |||| ||||||||||||   |||||||||||||||    
T  55080781 tcccatcctaaaccctccatccaaacacaccctta 55080815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 45 - 273
Target Start/End: Original strand, 22186717 - 22186950
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaa 144  Q
    ||||||||| ||||||| ||| |||||||| |||||||||||| || | ||||||||| |||||||||||| ||||| ||||||||| |||||||| |||    
T  22186717 ttagggtgtatttggattgagggtttaggaagggaagggagggcagagttcacttttaatttttaaattacaaacaacgtaaaatgtttttttaaaataa 22186816  T
Q  145 -----gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaa 239  Q
         ||||||||||||||||| || |||||| |||||| ||||||||||||||| |||||||||||||||||||||  ||| ||||||||| || || |    
T  22186817 ataaagtgtttttgaagtattatataatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagtga 22186916  T
Q  240 gccctcccctcctaaaccctcttcccaaacacac 273  Q
    | ||||||||  |||||||||   ||||||||||    
T  22186917 gtcctccccttttaaaccctccatccaaacacac 22186950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 47 - 251
Target Start/End: Original strand, 37761465 - 37761673
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaatt 142  Q
    ||||||||||||||| |||||||||||||| ||| |||||| || | ||||||||| ||||||||||||||||||  |||||| | ||||    ||||||    
T  37761465 agggtgtgtttggattgagagtttaggaggagaaaggagggtagagttcacttttaatttttaaattacgaacaacataaaatattttttagaataaatt 37761564  T
Q  143 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagcc 242  Q
    ||||||||||||||| ||| || |||||| |||||| ||||||||||||||| |||||||||||| ||||||||  ||| ||||||||| || | |||||    
T  37761565 aagtgtttttgaagtgttatataatcatttatcatgttgttaattcaattttctaaaaatcatttcataatgtccataatttaaaaaagaaaaggaagcc 37761664  T
Q  243 ctcccctcc 251  Q
    |||||||||    
T  37761665 ctcccctcc 37761673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 47 - 276
Target Start/End: Original strand, 56135749 - 56135965
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 141  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||     |||||    
T  56135749 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttcatttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaat 56135848  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 241  Q
    |||||||||||||||||||| ||||||||| ||||   ||||||||||||||| |||||               |||||| ||||||||| || ||||||    
T  56135849 taagtgtttttgaagtattatatgatcatttatca---tgttaattcaattttctaaaa---------------ctttaatttaaaaaagaaaagtaagc 56135930  T
Q  242 cctcccctcctaaaccctcttcccaaacacaccct 276  Q
    |||||||||||||||||||   |||||||||||||    
T  56135931 cctcccctcctaaaccctccatccaaacacaccct 56135965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 47 - 251
Target Start/End: Complemental strand, 7977741 - 7977530
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaa 140  Q
    ||||||||||||||| ||| ||||| |||||||| ||||||||||| ||| ||||||||||||||||||||| |||||||||||| ||||      ||||    
T  7977741 agggtgtgtttggattgagggtttatgaggggaaaggaggggagggttcaattttattttttaaattacgaagaatgtaaaatgttttttttaaagtaaa 7977642  T
Q  141 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaatt-aaaaaaggaatgtaa 239  Q
    |||| |||||||||||||||| ||||||||| |||||| |||||||||||||||  ||| || ||||||||||||   ||| || ||||||| || ||||    
T  7977641 ttaattgtttttgaagtattatatgatcatttatcatgttgttaattcaattttcaaaatattattttataatgttcgtaatttaaaaaaagaaaagtaa 7977542  T
Q  240 gccctcccctcc 251  Q
    ||||||||||||    
T  7977541 gccctcccctcc 7977530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 49 - 251
Target Start/End: Complemental strand, 47846298 - 47846090
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt------aaatt 142  Q
    ||||||||||||| ||| ||||| |||| ||||||| ||||||| | ||||||||||||||||||| |||||||||||| ||| |||||      |||||    
T  47846298 ggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaattatgaacaatgtaaagtgttttttttaaaataaatt 47846199  T
Q  143 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagcc 242  Q
    ||||||||||||||||||| ||||| ||| |||||| | ||||||||||||| ||||||| |||||||||||||   || ||||||||| || |||| |     
T  47846198 aagtgtttttgaagtattatatgattatttatcatgttcttaattcaattttgtaaaaattattttataatgtccagaatttaaaaaagaaaagtaaact 47846099  T
Q  243 ctcccctcc 251  Q
    |||||||||    
T  47846098 ctcccctcc 47846090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 45 - 251
Target Start/End: Complemental strand, 54576575 - 54576362
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt------- 137  Q
    |||||||||||||||||  || ||||| ||| ||||||||| | || | ||||||||| |||||||||||||||||| ||||||||| |||||           
T  54576575 ttagggtgtgtttggattaagggtttaagagaggaagggagagaagagttcacttttaatttttaaattacgaacaacgtaaaatgttttttttttaaat 54576476  T
Q  138 aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgt 237  Q
    ||||||| |||||||||||||||| || |||||| |||| | ||||||||||||||| || ||||||||||||||||||  |||  |||||||| || ||    
T  54576475 aaattaaatgtttttgaagtattatataatcatttatcacgttgttaattcaattttctataaatcattttataatgtccgtaatctaaaaaagaaaagt 54576376  T
Q  238 aagccctcccctcc 251  Q
    ||||||||||||||    
T  54576375 aagccctcccctcc 54576362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 68 - 231
Target Start/End: Complemental strand, 29993994 - 29993826
Alignment:
Q  68 tttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaa-----attaagtgtttttgaagtattac 162  Q
    |||||||||| || ||||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||     ||||||| ||||||||||||||     
T  29993994 tttaggagggaaatggaggggagggttcacttttactttttaaattacgaacaatgtaaaaagtttttttaaaatagattaagtatttttgaagtattat 29993895  T
Q  163 atgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 231  Q
    || |||||  |||||| ||||||||||||||| |||||||||||||||| ||||  ||| |||||||||    
T  29993894 atcatcatcaatcatgttgttaattcaattttctaaaaatcattttatagtgtccgtaatttaaaaaag 29993826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 231
Target Start/End: Complemental strand, 4437633 - 4437480
Alignment:
Q  82 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaattaagtgtttttgaagtattacatgatcattgatcat 177  Q
    ||||||||||| ||| |||||||||||||||||  ||||||||||||||| |||     ||||| ||||||||||||||||||| ||||||| | |||||    
T  4437633 ggaggggagggttcatttttattttttaaattaaaaacaatgtaaaatgtttttaaaaataaatcaagtgtttttgaagtattatatgatcaattatcat 4437534  T
Q  178 gctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 231  Q
    | |||||||||||||||||||||||||||||||||| ||  ||| |||||||||    
T  4437533 gttgttaattcaattttttaaaaatcattttataatatccataatttaaaaaag 4437480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 231
Target Start/End: Original strand, 5824899 - 5825085
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaa 144  Q
    ||||||||||||||||| ||| |||| ||| ||||| | |||  || ||||| ||||||||||||||||||||| |||||||||||| | |||||| |||    
T  5824899 ttagggtgtgtttggattgagggttttggaagggaatgaaggttagtgctcatttttattttttaaattacgaaaaatgtaaaatgtttgtttaaaataa 5824998  T
Q  145 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 231  Q
        ||| ||    ||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||| | |||||||    
T  5824999 aatgtttggattggttatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtctgtaattcaaaaaag 5825085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 230
Target Start/End: Original strand, 51329796 - 51329983
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 141  Q
    ||||||||||||||| |||||||||||||||||||  || |||| | ||| ||||| ||||||||||||||||||   ||||||| ||||     |||||    
T  51329796 agggtgtgtttggattgagagtttaggaggggaagaaagaggagagttcaattttaatttttaaattacgaacaacacaaaatgtttttttaaaataaat 51329895  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaa 230  Q
    ||||| |||||||||||||| || |||||| |||||  ||||||||||||||| || |||| |||||||||| ||  ||| ||||||||    
T  51329896 taagt-tttttgaagtattatataatcatttatcattttgttaattcaattttctataaattattttataatatccctaatttaaaaaa 51329983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 106 - 230
Target Start/End: Complemental strand, 54001289 - 54001162
Alignment:
Q  106 tttaaattacgaacaatgtaaaatgtctttttaaattaa------gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaa 199  Q
    ||||||| ||||||||||||||||||||||||||| |||      ||||||||||||||||| ||||||||| ||||||   ||||||||||||||||||    
T  54001289 tttaaatcacgaacaatgtaaaatgtctttttaaaataaataaaagtgtttttgaagtattatatgatcatttatcatg---ttaattcaattttttaaa 54001193  T
Q  200 aatcattttataatgtctttaaattaaaaaa 230  Q
    ||| |||||||||||||  ||| ||||||||    
T  54001192 aattattttataatgtccgtaatttaaaaaa 54001162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 330 - 406
Target Start/End: Complemental strand, 44156052 - 44155976
Alignment:
Q  330 tgtatctacttttcattcatattccacattctattgatcttaccaactttcttgtgaattctcgtagcttaagactt 406  Q
    ||||||||||||| ||||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||||||    
T  44156052 tgtatctacttttaattcatattccccattttagtgattttaccaactttcttgtgaattctcgtagcttaagactt 44155976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 247
Target Start/End: Complemental strand, 21695132 - 21694929
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt----aaatt 142  Q
    ||||||||||||||| | | ||||| |||||||||| || |||||| | |||||| | |||||||||| | ||||| |||  | | |||||    |||||    
T  21695132 agggtgtgtttggattgggggtttatgaggggaaggaagcggagggtttacttttctattttaaattatggacaatataatttattttttttaataaatt 21695033  T
Q  143 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagcc 242  Q
    ||||||  ||||||||||| ||||||||| |||||  ||||| |||||||| ||||||| ||||||||| ||||  ||| ||||||||| || |||||||    
T  21695032 aagtgtgattgaagtattatatgatcatt-atcattttgttatttcaatttattaaaaaccattttatagtgtccgtaatttaaaaaagaaaagtaagcc 21694934  T
Q  243 ctccc 247  Q
    |||||    
T  21694933 ctccc 21694929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 240
Target Start/End: Original strand, 34995099 - 34995247
Alignment:
Q  95 cacttttattttttaaattacgaacaatgtaaaatgtcttt-----ttaaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattca 189  Q
    |||||||||||||||||||||||||||||| |||||| |||      ||||||||||||||||||||||||| | ||| ||| ||||||   ||||||||    
T  34995099 cacttttattttttaaattacgaacaatgtgaaatgtttttctaaaataaattaagtgtttttgaagtattataagattatttatcatg--tttaattca 34995196  T
Q  190 attttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag 240  Q
    ||||| |||||||||||| ||||| ||  ||| ||||||||| || |||||    
T  34995197 attttctaaaaatcatttgataatatccgtaatttaaaaaagaaaagtaag 34995247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 44145771 - 44145844
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaa 118  Q
    |||||||||||||||||  |  ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44145771 ttagggtgtgtttggattcaaggtttaggaggggaagggaggggaggactcacttttattttttaaattacgaa 44145844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 49735468 - 49735557
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 136  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||  ||||||||||||| ||||  | |||||||||||    
T  49735468 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggacaacatgaaatgtctttt 49735557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 9030272 - 9030391
Alignment:
Q  104 tttttaaattacgaacaatgtaaaatgtctttt------taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaatttttta 197  Q
    |||||||||||||||||| ||||||||| ||||      |||||||||||||||| |||||||| || |||||| |||||  | |||||| |||||| ||    
T  9030272 tttttaaattacgaacaacgtaaaatgttttttaaacaataaattaagtgtttttaaagtattatataatcatttatcattttattaattaaattttcta 9030371  T
Q  198 aaaatcattttataatgtct 217  Q
    ||||||||||||||||||||    
T  9030372 aaaatcattttataatgtct 9030391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 31348565 - 31348500
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaat 112  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| | |||||| ||||||||||    
T  31348565 agggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaat 31348500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 54576329 - 54576410
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| |||||| ||||||| |||||| ||| | |||||||    
T  54576329 ggtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacggacattataaaatg 54576410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 54935315 - 54935244
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| | | ||||  |||||||||||||    
T  54935315 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacg 54935244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 54935067 - 54935161
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaaggga-ggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 140  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||||| | |||||| ||||||||||||||||| || ||| |||| ||| ||||    
T  54935067 agggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacgaactatataacatgtttttctaaa 54935161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 54320682 - 54320609
Alignment:
Q  43 agttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| |   ||||| |||||||||||||    
T  54320682 agttagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacg 54320609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 37711369 - 37711285
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 129  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| | |  |||  ||||||||||||| ||| | ||||||    
T  37711369 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggacactataaaat 37711285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 46007947 - 46007879
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatt 113  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||| | |||||| |||||||||||    
T  46007947 ttagagtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatt 46007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 49735743 - 49735691
Alignment:
Q  40 gaaagttagggtgtgtttggatggagagtttaggaggggaagggaggggaggg 92  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  49735743 gaaagttagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 49735691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 145 - 279
Target Start/End: Original strand, 11089619 - 11089756
Alignment:
Q  145 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc--- 241  Q
    |||||||||||||| || ||||||||| || ||| ||||||||||||||| ||||||  ||||||||| |||  ||| ||||||||| ||||||| |       
T  11089619 gtgtttttgaagtaatatatgatcatttatgatgttgttaattcaattttctaaaaaatattttataaagtccgtaatttaaaaaagaaatgtaaaccat 11089718  T
Q  242 cctcccctcctaaaccctcttcccaaacacacccttaa 279  Q
    | |||||| ||||| ||||   ||||||||||||||||    
T  11089719 cttccccttctaaatcctcaatccaaacacacccttaa 11089756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 27735987 - 27735900
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 136  Q
    ||||||||||||||||| ||||||||||||||||||||  |||| ||| ||||  ||||||||||||| ||| | |||||||| ||||    
T  27735987 ggtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggacactataaaatgtttttt 27735900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 35543543 - 35543448
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 140  Q
    ||||| ||||||||||| ||| ||||| ||||||||  || ||||| |||||||||||||||| ||||||||||||  ||||||| | ||||||||    
T  35543543 ttaggatgtgtttggattgagggtttatgaggggaaatgatgggagagctcacttttatttttaaaattacgaacatagtaaaatatttttttaaa 35543448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 45132744 - 45132610
Alignment:
Q  42 aagttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaat 141  Q
    ||||||||||||||||| || ||||||||||||||||||| |||| || || | |||||| |||||||||||||| || || ||| ||||     |||||    
T  45132744 aagttagggtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacggactatataatatgt-aaaataaat 45132646  T
Q  142 taagtgtttttgaagtattacatgatcattgatcat 177  Q
    |||||||  ||||||||||| |||||| || |||||    
T  45132645 taagtgtgattgaagtattatatgatcgtttatcat 45132610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 68 - 158
Target Start/End: Original strand, 51074362 - 51074459
Alignment:
Q  68 tttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-------taaattaagtgtttttgaagta 158  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||| ||||| |||||| ||| ||||       ||||||||||||||||||||||    
T  51074362 tttaggaggagaaaggacgggagggctcacttttattttttaaattatgaacattgtaaagtgtttttttttttaataaattaagtgtttttgaagta 51074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 215
Target Start/End: Original strand, 14539367 - 14539445
Alignment:
Q  137 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgt 215  Q
    ||||||||||||||||||||||||| ||||||||| || ||| | |||||| |||||| ||| || |||||||||||||    
T  14539367 taaattaagtgtttttgaagtattatatgatcatttattatgttcttaatttaattttctaacaaacattttataatgt 14539445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 260
Target Start/End: Complemental strand, 47433955 - 47433734
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaat-gtaaaatgtctttt-----ta 138  Q
    ||||||||||||||| | ||  ||||||||||||||||||| |||||| | |||||| |||||||||||||  || ||  ||| |||| ||||     ||    
T  47433955 ttagggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattacagactataataacatgtttttttaaaata 47433856  T
Q  139 aattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgta 238  Q
    ||||||||||  ||||||||||| |||||| || || ||| | ||| || ||||||||||||| ||||  ||||||||  ||| ||||||| | ||  ||    
T  47433855 aattaagtgtgattgaagtattatatgatcgtttat-atgttattattttaattttttaaaaaacattccataatgtccataatttaaaaacgaaaatta 47433757  T
Q  239 agccc-tcccctcctaaaccctc 260  Q
    | ||| |||||||||||||||||    
T  47433756 aacccttcccctcctaaaccctc 47433734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 51 - 211
Target Start/End: Original strand, 55510173 - 55510338
Alignment:
Q  51 tgtgtttggatggagagtttaggaggggaaggg-aggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaa 144  Q
    ||||||||||| ||| | |||||  |||||||| |||||||| || ||||||  ||||||| |||   |||||||||||||| ||||||||     ||||    
T  55510173 tgtgtttggattgaggggttagggagggaaggggaggggaggacttacttttcatttttaatttaaagacaatgtaaaatgtttttttaaaataaattaa 55510272  T
Q  145 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttata 211  Q
    ||||   |||||||||| ||||||||| |||||| ||||| ||||||||||| ||||| ||||||||    
T  55510273 gtgtgactgaagtattatatgatcattcatcatgttgttatttcaatttttttaaaat-attttata 55510338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 6938491 - 6938422
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||||  ||||| |||||||| ||||||||||| ||||||||  |||||||||||||    
T  6938491 agggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattacg 6938422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 17938352 - 17938164
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaa 140  Q
    ||||| ||||||||| |||| ||||||||||||||||||  ||| | | |||||| ||||||||||||| ||| || ||| || | ||||      ||||    
T  17938352 agggtatgtttggattgagaatttaggaggggaagggagatgagagtttacttttcttttttaaattacaaactatataacatatttttttttaaataaa 17938253  T
Q  141 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 229  Q
    ||||||||  ||||||||||| |||||| || |||||| | ||| || || |||||||||| ||||  ||||||||  ||| |||||||    
T  17938252 ttaagtgtgattgaagtattatatgatcgtttatcatgttattattttaaatttttaaaaaacattccataatgtccataatttaaaaa 17938164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 37761710 - 37761641
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatta 114  Q
    |||||||||||||||||||||  ||||  |||||||||||||||||||||  ||||| ||||||||||||    
T  37761710 ttagggtgtgtttggatggaggatttaaaaggggaagggaggggagggcttccttttcttttttaaatta 37761641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 21694905 - 21694973
Alignment:
Q  62 ggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    |||| |||||||||||||||||| ||||||||| |||||| |||||||||||||| ||| | |||||||    
T  21694905 ggagggtttaggaggggaagggacgggagggcttacttttcttttttaaattacggacactataaaatg 21694973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 178
Target Start/End: Original strand, 27735749 - 27735881
Alignment:
Q  51 tgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaag 145  Q
    ||||||||||| ||| |||||||||||||||||| | ||||| | | ||||  ||||||||||||| || || ||| |||| ||||     |||||||||    
T  27735749 tgtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacggactatataacatgtttttttaaaataaattaag 27735848  T
Q  146 tgtttttgaagtattacatgatcattgatcatg 178  Q
    |||  ||||||||||| ||||||||| ||||||    
T  27735849 tgtgattgaagtattatatgatcatttatcatg 27735881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 44156207 - 44156147
Alignment:
Q  270 acacccttaataaagtaagtcaaaaagaattaatataagtaattaaaagtagtactatcat 330  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||| ||| |||||||||    
T  44156207 acactcttaataaaataagtcaaagagaattaatataagtaattaaaggtaatactatcat 44156147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 137
Target Start/End: Complemental strand, 47846505 - 47846417
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt 137  Q
    ||||||||||||| ||| ||||| |||| |||||||  ||| || | ||||||||||||||||||| |||||||||||| ||| |||||    
T  47846505 ggtgtgtttggattgagggtttaagaggagaagggaaaggaaggtttacttttattttttaaattatgaacaatgtaaagtgttttttt 47846417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 168
Target Start/End: Original strand, 29798288 - 29798410
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt-ttaaattaag 145  Q
    ||||||||||||||| ||  ||||||||||||||| ||| |||  | | ||||||||||||||||||||  || || ||| |||| ||| |||||| |||    
T  29798288 agggtgtgtttggattgatggtttaggaggggaagagagaggatagtttacttttattttttaaattacagactatataacatgtttttcttaaatcaag 29798387  T
Q  146 tgtttttgaagtattacatgatc 168  Q
    |||  ||||||||||| ||||||    
T  29798388 tgtgattgaagtattatatgatc 29798410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 41174589 - 41174547
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggagggga 89  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  41174589 agggtgtgtttggatggagggtttaggaggggaagggagggga 41174547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 51075218 - 51075268
Alignment:
Q  163 atgatcattgatcatgctgttaattcaattttttaaaaatcattttataat 213  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||||||    
T  51075218 atgatcatttatcatgttgttaattcaattttttaaaaattattttataat 51075268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 176
Target Start/End: Original strand, 41227518 - 41227614
Alignment:
Q  82 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt--taaattaagtgtttttgaagtattacatgatcattgatca 176  Q
    |||||| |||||| |||| | |||||||||||| ||||||| ||||||||| |||   |||||||||||  ||||||||||| ||||||||| ||||    
T  41227518 ggagggcagggcttacttctcttttttaaattatgaacaatataaaatgtcatttaaaaaattaagtgtgattgaagtattatatgatcatttatca 41227614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 53260718 - 53260759
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggagggg 88  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  53260718 agggtgtgtttggatggagggtttaggaggggaagggagggg 53260759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 16400798 - 16400862
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttatttttta 109  Q
    |||| ||||| |||||| ||| |||||||||| ||||||||||||||  ||||||||||||||||    
T  16400798 ttagtgtgtgattggattgagggtttaggaggagaagggaggggaggattcacttttatttttta 16400862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 26166935 - 26167005
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||||| | |   |||| |||||||||||||    
T  26166935 ttagggtgtgtttggattgagggtttaggaggggaatggaggggagagtttgtttttcttttttaaattac 26167005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 1968603 - 1968534
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||| ||| ||||||||||||||||||||| || | | | ||||  |||||||||||||    
T  1968603 agggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacg 1968534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 37711138 - 37711183
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggaggg 92  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||||    
T  37711138 agggtgtgtttggattgagggtttaggaggggaagggaagggaggg 37711183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 45742134 - 45742065
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||||||||||| || ||||||| ||| |||||||||||| | | ||||||  |||||||||||||    
T  45742134 agggtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacg 45742065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 4437428 - 4437492
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatta 114  Q
    |||||||||||||||| |||||||| || ||||||||||| | || | |||| ||||||||||||    
T  4437428 gtgtgtttggatggagggtttaggatggaaagggaggggatgacttatttttcttttttaaatta 4437492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 29993774 - 29993854
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    ||||||||||||  || ||||||||||||||| ||| ||||| |||  |||| |||||||||||||| ||| | |||||||    
T  29993774 gtgtgtttggattaagggtttaggaggggaagtgagtggaggactcgtttttcttttttaaattacggacactataaaatg 29993854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 31348314 - 31348390
Alignment:
Q  45 ttagggtgtgtttggatggagagtttag-----gaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||||||| ||||||     ||||||||||||||| |||| | ||||||  |||||||||||||    
T  31348314 ttagggtgtgtttggatggagggtttagtttatgaggggaagggagggaagggtttacttttcatttttaaattacg 31348390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 35565556 - 35565612
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcactttt 101  Q
    |||| ||| |||||||| ||| |||||| ||||||||||||||||||||| ||||||    
T  35565556 ttagagtgcgtttggattgagggtttagcaggggaagggaggggagggcttactttt 35565612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 47694347 - 47694403
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcactttt 101  Q
    ||||||| |||||||||||||  ||| |||| |||||||||||||||||| ||||||    
T  47694347 ttagggtatgtttggatggaggattttggagcggaagggaggggagggcttactttt 47694403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 5730828 - 5730875
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggaggg 92  Q
    ||||||||||||||||||||| ||||||||||| ||| || |||||||    
T  5730828 ttagggtgtgtttggatggagggtttaggagggaaagagatgggaggg 5730875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 24995267 - 24995216
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttt 100  Q
    ||||||||||||| ||||| |||| ||| ||||||||||||| |||||||||    
T  24995267 ggtgtgtttggatcgagagcttagaaggagaagggaggggagagctcacttt 24995216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 34995295 - 34995224
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||| ||| ||| |||||||| |||||| ||||| | | || |||||| ||||||||||||||    
T  34995295 ttagggtgtgtttagattgagggtttaggaagggaagtgagggtaagacttacttttcttttttaaattacg 34995224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 45741888 - 45741959
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||| ||| |||||||||||||| | | | ||||  | |||||| ||||||||||||||    
T  45741888 ttagggtgtgtttggattgagggtttaggaggggaatgaatgtgaggatttacttttgttttttaaattacg 45741959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 2248043 - 2247977
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    ||||||||||||| ||| |||||||||| |||| || ||||| | | |||||| |||||||||||||    
T  2248043 ggtgtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattac 2247977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 7977520 - 7977578
Alignment:
Q  72 ggaggggaagggaggggagggctcactttt-attttttaaattacgaacaatgtaaaat 129  Q
    |||||| |||||||||||||||| ||||||  |||||||||||||||||| | ||||||    
T  7977520 ggagggaaagggaggggagggcttacttttctttttttaaattacgaacattataaaat 7977578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 35543411 - 35543333
Alignment:
Q  182 ttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctc 260  Q
    ||||||||||||||||||||| ||||||||||||   ||| ||||||||| ||  ||||  ||||| || |||||||||    
T  35543411 ttaattcaattttttaaaaattattttataatgttcctaatttaaaaaagaaaaataagttctcccttcttaaaccctc 35543333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 55510412 - 55510331
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 129  Q
    |||| |||||||||||||||||||| ||||| |||  | | ||||| | |||||||| |||||||||||||||| | ||||||    
T  55510412 agggcgtgtttggatggagagtttaagagggaaagaaatgtgagggtttacttttat-ttttaaattacgaacactataaaat 55510331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 56135967 - 56135933
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggagggga 79  Q
    ||||||||||||||||||||| |||||||||||||    
T  56135967 ttagggtgtgtttggatggagggtttaggagggga 56135933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 24565346 - 24565415
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||||  |||||||| ||||||   |||||||| | ||||||  |||||||||||||    
T  24565346 agggtgtgtttggatggaaggtttaggaagggaagactggggagggtttacttttcatttttaaattacg 24565415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 5731072 - 5731032
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggag 90  Q
    ||||||||| || ||| ||||||||||||||||||||||||    
T  5731072 gtgtgtttgaattgagggtttaggaggggaagggaggggag 5731032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 5825140 - 5825072
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    ||||||||||||||||||| ||||||||| ||||| | || ||||  | |||||| |||||| ||||||    
T  5825140 agggtgtgtttggatggagggtttaggagaggaagtggggagaggatttacttttcttttttgaattac 5825072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 11842401 - 11842325
Alignment:
Q  194 tttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaaca 270  Q
    ||||||||  |||||||| ||||| ||| || |||||| || ||||| |||||||| |||||||||||  |||||||    
T  11842401 tttaaaaaatattttatagtgtctgtaatttgaaaaagaaaagtaagtcctccccttctaaaccctctatccaaaca 11842325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 23332777 - 23332709
Alignment:
Q  46 tagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatta 114  Q
    |||| ||||||||||| ||||||||  ||||||||| ||| | | | ||||||||| ||||||||||||    
T  23332777 taggatgtgtttggattgagagtttgtgaggggaagagagtgaatgactcacttttcttttttaaatta 23332709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 32192847 - 32192891
Alignment:
Q  87 ggagggctcacttttattttttaaattacgaacaatgtaaaatgt 131  Q
    |||||| |||||||||||||||||||||  || ||||||||||||    
T  32192847 ggagggttcacttttattttttaaattatcaataatgtaaaatgt 32192891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 54320435 - 54320475
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggg 87  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  54320435 agggtgtgtttggattgagggtttaggagggaaagggaggg 54320475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 1e-69; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 47 - 251
Target Start/End: Original strand, 10204576 - 10204785
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 141  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||     |||||    
T  10204576 agggtgtgtttggatcgagggtttaggaggggaagggaggtgagggctcacttttattttttaaattaccaacaatgtaaaatgtctttttaaaataaat 10204675  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 241  Q
    |||||||||||||||||||| ||||||||| || | | ||||||||||||||||||||||||||||| |||||||| ||||||||||||| || |||||     
T  10204676 taagtgtttttgaagtattatatgatcatttattacgttgttaattcaattttttaaaaatcattttttaatgtctgtaaattaaaaaagaaaagtaagt 10204775  T
Q  242 cctcccctcc 251  Q
    ||||||||||    
T  10204776 cctcccctcc 10204785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 47 - 251
Target Start/End: Complemental strand, 15986868 - 15986659
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 141  Q
    ||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||     |||||    
T  15986868 agggtgtgtttggattgagggtttaggaggggaaggaagaggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaaataaat 15986769  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 241  Q
    ||||||||||| |||||||| |||||||||    ||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||  ||||     
T  15986768 taagtgtttttaaagtattatatgatcattttaaatgttgttaattcaattttttaaaagtcattttataatgtctgtaaattaaaaaagaaaattaagt 15986669  T
Q  242 cctcccctcc 251  Q
    ||||||||||    
T  15986668 cctcccctcc 15986659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 47 - 276
Target Start/End: Complemental strand, 40305909 - 40305670
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 141  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||  |||| |||||||||||||||||||| ||||||||||||| ||||     |||||    
T  40305909 agggtgtgtttggattgagggtttaggaggagaagggaggggagaactcatttttattttttaaattacgaccaatgtaaaatgttttttcaaaataaat 40305810  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 241  Q
    |||| |||||||||||| || ||||||||| |||||  ||||||||||||||| ||||||| |||||||||||||| ||| ||||||||| ||  |||||    
T  40305809 taagggtttttgaagtactatatgatcatttatcatattgttaattcaattttctaaaaattattttataatgtctgtaatttaaaaaagaaaactaagc 40305710  T
Q  242 cc-----tcccctcctaaaccctcttcccaaacacaccct 276  Q
    ||     |||||||||||||||||   |||||||||||||    
T  40305709 cctcccttcccctcctaaaccctccatccaaacacaccct 40305670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 49 - 276
Target Start/End: Complemental strand, 8551660 - 8551427
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaatta 143  Q
    ||||||||||||| ||  ||||||||||||||| |||||| || ||||||||||||||||||||||||| ||||||||||||| ||||     |||||||    
T  8551660 ggtgtgtttggattgaaggtttaggaggggaagagagggggggtctcacttttattttttaaattacgagcaatgtaaaatgtgttttaaaaataaatta 8551561  T
Q  144 agtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccc 243  Q
    ||||||||| |||||||| ||||||||| || ||| |||||||| ||||||||||||||||||||||||||||| ||  |||| |||  ||||||| |||    
T  8551560 agtgtttttaaagtattatatgatcatttataatgttgttaatttaattttttaaaaatcattttataatgtctgtagtttaagaaataaatgtaaaccc 8551461  T
Q  244 -tcccctcctaaaccctcttcccaaacacaccct 276  Q
     | ||||  ||||||||||  |||||||||||||    
T  8551460 tttccctattaaaccctctatccaaacacaccct 8551427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 47 - 251
Target Start/End: Complemental strand, 33744437 - 33744228
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----t 141  Q
    ||||||| ||||||| ||| |||||||||  |||||||||||||||||||||||||| ||||||||||||||||||  ||||||| ||||||||     |    
T  33744437 agggtgtatttggattgagggtttaggagatgaagggaggggagggctcacttttatattttaaattacgaacaattcaaaatgtttttttaaaataaat 33744338  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 241  Q
    ||||||||||||||| | || ||||||||| |||||| |||||||||||||||  ||||||||||||||||||||  ||| ||||||||| || |||| |    
T  33744337 taagtgtttttgaagaaatatatgatcatttatcatgttgttaattcaattttcaaaaaatcattttataatgtccataatttaaaaaagaaaagtaaac 33744238  T
Q  242 cctcccctcc 251  Q
    ||||||||||    
T  33744237 cctcccctcc 33744228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 49 - 251
Target Start/End: Original strand, 34980812 - 34981019
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaatta 143  Q
    ||||||||||||| ||  ||||||||||||||||||||| |||| ||||||||| |||||||||||||||||| ||||||| | ||||     |||||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattacgaacaacgtaaaatatttttttaaaataaatta 34980911  T
Q  144 agtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccc 243  Q
    |||||||||||||||||| || |||||| |||||| |||||| |||||||| || ||||||||||||||||||  ||| ||||||||| || ||||| ||    
T  34980912 agtgtttttgaagtattatataatcatttatcatgttgttaactcaattttctataaatcattttataatgtccataatttaaaaaagaaaagtaagtcc 34981011  T
Q  244 tcccctcc 251  Q
    ||||||||    
T  34981012 tcccctcc 34981019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 67 - 251
Target Start/End: Original strand, 10043272 - 10043461
Alignment:
Q  67 gtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtatta 161  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |  |||||||     |||||||||||||||||||||    
T  10043272 gtttatgaggggaagggaggggatgactcacttttattttttaaattacgaacaatgtaaaatattgttttaaaagaaattaagtgtttttgaagtatta 10043371  T
Q  162 catgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcc 251  Q
     ||||| ||| || ||| ||||||||||||||| |||||||||||||||||| |   ||| ||||||||| || || || ||||||||||    
T  10043372 tatgattatttataatgttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtgagtcctcccctcc 10043461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 45 - 230
Target Start/End: Original strand, 21580945 - 21581135
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 139  Q
    ||||||||| ||||||| | | |||| |||| | |||||||||||||| ||||||||||||| |||||||||||||||||||||| | ||||     |||    
T  21580945 ttagggtgtatttggattgggggttttggagagaaagggaggggaggggtcacttttattttctaaattacgaacaatgtaaaatatttttttaaaataa 21581044  T
Q  140 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaa 230  Q
    |||||||||||||||||||| | |||| |||| |||||| ||||||||||||||| ||||||| |||| |||| |||  ||| ||||||||    
T  21581045 attaagtgtttttgaagtatcatatgaacatttatcatgttgttaattcaattttctaaaaattatttcataacgtccataatttaaaaaa 21581135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 201
Target Start/End: Original strand, 5688448 - 5688572
Alignment:
Q  82 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaa-----attaagtgtttttgaagtattacatgatcattgatca 176  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||     |||||||||||||||||||||| || |||||  ||||    
T  5688448 ggaggggagggttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattatatcatcatcaatca 5688547  T
Q  177 tgctgttaattcaattttttaaaaa 201  Q
    || ||||||||||||||| ||||||    
T  5688548 tgttgttaattcaattttctaaaaa 5688572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 1658055 - 1657968
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 136  Q
    ||||||||||||||||| |||||||||||||||||||||||||| | ||||||  ||||||||||||| ||| | |||||||| ||||    
T  1658055 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggacactataaaatgtttttt 1657968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 240
Target Start/End: Original strand, 6382422 - 6382525
Alignment:
Q  137 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatg 236  Q
    |||||||||| |||||||||||| |||||| |||| |||||| ||||||||||||||| ||||||  |||||||||||||  ||||||| ||||| || |    
T  6382422 taaattaagtctttttgaagtatcacatgaacatttatcatgttgttaattcaattttctaaaaagtattttataatgtccgtaaattagaaaagaaaag 6382521  T
Q  237 taag 240  Q
    ||||    
T  6382522 taag 6382525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 14245088 - 14245177
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 136  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||  | |||||| |||||||||||||| ||| ||| |||||| ||||    
T  14245088 agggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggacactgtgaaatgtttttt 14245177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 10476274 - 10476202
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacga 117  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| | | |||| || ||||||||||||||    
T  10476274 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagtgtttacttataatttttaaattacga 10476202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 13634954 - 13634882
Alignment:
Q  48 gggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaaca 120  Q
    |||||||||||||| ||| |||||||||||||||||||||||||| | ||||||  |||||||||||||||||    
T  13634954 gggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaaca 13634882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 10204822 - 10204752
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| || |||||| |||||||| ||||    
T  10204822 ttagggtgtgtttggaaagagagtttaggaggggaagggaggggaggacttacttttcttttttaatttac 10204752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 7544136 - 7544205
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  7544136 agggtgtgtttggattgagggtttaggaagggaagggaggggagggctaaattttcttttttaaattacg 7544205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 13634711 - 13634776
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaat 112  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| | |||||| ||||||||||    
T  13634711 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaat 13634776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 136
Target Start/End: Complemental strand, 36363271 - 36363187
Alignment:
Q  52 gtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 136  Q
    |||||||||||||| |||||||||||||||||||| ||| | ||||||||  ||||||||||||| | | | |||||||||||||    
T  36363271 gtgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacggatactataaaatgtctttt 36363187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 89 - 231
Target Start/End: Complemental strand, 6597984 - 6597845
Alignment:
Q  89 agggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaattaagtgtttttgaagtattacatgatcattgatcatgctgtta 184  Q
    |||||||| ||||||||||||||||| ||| |||||||||| | ||||    ||||||||||||       |||||| ||||||||| |||||| |||||    
T  6597984 agggctcatttttattttttaaattatgaataatgtaaaatattttttaaaataaattaagtgt-------gtattatatgatcatttatcatgttgtta 6597892  T
Q  185 attcaattttttaaaaatcattttataatgtctttaaattaaaaaag 231  Q
     |||||||||  ||||||||||||| ||||||  ||| |||||||||    
T  6597891 tttcaattttcaaaaaatcattttacaatgtccgtaatttaaaaaag 6597845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 211
Target Start/End: Original strand, 11436939 - 11437108
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaa------atgtctttttaaa 140  Q
    |||| |||||||||| ||| ||||||||||||||||||| |||||||| |||||  |||||||||||||| ||||| || |      || | ||||||||    
T  11436939 agggcgtgtttggattgagggtttaggaggggaagggagaggagggcttactttccttttttaaattacggacaatatatatattttatttatttttaaa 11437038  T
Q  141 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttata 211  Q
    | ||  ||  ||||||||||| | ||||||| |||  ||||||| || ||||||||||||| |||||||||    
T  11437039 taaac-gtgattgaagtattatacgatcatttatcgcgctgttattttaattttttaaaaaacattttata 11437108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 14245292 - 14245206
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgt 131  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||| |   ||||  ||||||||||||| ||| ||| ||||||    
T  14245292 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggacactgtgaaatgt 14245206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 10043156 - 10043055
Alignment:
Q  139 aattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgta 238  Q
    |||||||||||||| |||||||| ||||||||| |||||| ||||||||||||||| || |||| ||| | |||||| | ||| |||| |||| || |||    
T  10043156 aattaagtgtttttaaagtattatatgatcatttatcatgttgttaattcaattttctagaaataattctttaatgtttataatttaagaaagaaaagta 10043057  T
Q  239 ag 240  Q
    ||    
T  10043056 ag 10043055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 16938471 - 16938524
Alignment:
Q  39 tgaaagttagggtgtgtttggatggagagtttaggaggggaagggaggggaggg 92  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  16938471 tgaaaattagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 16938524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 26414893 - 26414962
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||| | ||||||  |||||||||||||    
T  26414893 agggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacg 26414962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 33744191 - 33744260
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatta 114  Q
    ||||||||||||||||||||| ||| ||| || ||||||||||||||| | |||||| ||||||||||||    
T  33744191 ttagggtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaatta 33744260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 34981056 - 34980987
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatta 114  Q
    |||||||||||||  |||||| ||||| ||||||||||||||||||| || |||||| ||||||||||||    
T  34981056 ttagggtgtgttttaatggagggtttaagaggggaagggaggggaggacttacttttcttttttaaatta 34980987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 15858986 - 15858902
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 129  Q
    |||||||||||||| || |||  ||| ||||| |||||||||||| | ||||| |||||||| |||||||||||||||| |||||    
T  15858986 ttagggtgtgtttgaattgaggctttgggaggtgaagggaggggatgactcacatttattttctaaattacgaacaatggaaaat 15858902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 2550592 - 2550533
Alignment:
Q  51 tgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaa 110  Q
    ||||||||||| ||| |||||||||||||||||||||||||| | |||||| ||||||||    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaa 2550533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 14684729 - 14684638
Alignment:
Q  46 tagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt 137  Q
    ||||||||||||||||  || |||||||||||| || ||| |||||||| |||||| |||||| |||||||  |||| |||||||| |||||    
T  14684729 tagggtgtgtttggatttagggtttaggaggggcagagagaggagggcttacttttctttttttaattacgggcaatataaaatgttttttt 14684638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 15986622 - 15986713
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 136  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||||| || | |||| |||||||| ||||  ||| | ||||||| |||||    
T  15986622 ttagggtgtgtttggaaagagggtttaggaggggaagggaggggaggacttaattttcttttttaatttacagacattataaaatgactttt 15986713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 12036084 - 12036007
Alignment:
Q  137 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgt 215  Q
    |||||||||||||||| |||||||| ||||| ||| |||||| || |||||||||||| ||| ||| ||||||||||||    
T  12036084 taaattaagtgttttttaagtattatatgataatttatcatgttg-taattcaattttctaataataattttataatgt 12036007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 40305668 - 40305710
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggg 87  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  40305668 ttagggtgtgtttggatggagggtttaggaggggaagggaggg 40305710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 10043489 - 10043425
Alignment:
Q  54 gtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaa 118  Q
    |||||||| ||  ||||||||||  ||||||||||||| ||||||||| ||||||||||||||||    
T  10043489 gtttggattgattgtttaggaggaaaagggaggggaggactcacttttcttttttaaattacgaa 10043425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 7544378 - 7544335
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggaggg 92  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  7544378 ggtgtgtttggatggagggtttaggaggggaaggaaggggaggg 7544335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 5688636 - 5688590
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagg 91  Q
    ||||||||||||||||| ||| |||||||||||||||||| ||||||    
T  5688636 ttagggtgtgtttggattgagggtttaggaggggaagggaagggagg 5688590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 11757144 - 11757102
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggaggg 92  Q
    |||||||||||||||| ||||| ||||||||||||||||||||    
T  11757144 gtgtgtttggatggagggtttaagaggggaagggaggggaggg 11757102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 12035936 - 12036018
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 129  Q
    ||||||||||||||| ||  ||||||||||||||||||| ||||| ||   |||| |||||||||||| ||||| | ||||||    
T  12035936 agggtgtgtttggatagatggtttaggaggggaagggagaggaggacttgtttttcttttttaaattatgaacattataaaat 12036018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 21581188 - 21581150
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggagggg 88  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  21581188 gtgtgtttggatggagggtttaggaggggaagggagggg 21581150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 8502835 - 8502904
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||||  ||||| || ||||| ||| ||||||| ||||||||  |||||||||||||    
T  8502835 agggtgtgtttggatggatggtttatgaagggaatggatgggagggttcacttttcatttttaaattacg 8502904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 16938723 - 16938678
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggaggg 92  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||    
T  16938723 agggtgtgtttggatggagggtttaggagaggaatggaggggaggg 16938678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 229
Target Start/End: Complemental strand, 28279721 - 28279533
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaa 140  Q
    ||||||||||||||| |||||| ||  ||||||||||||| ||||| | ||||||  ||||||||||| | |  || ||| |||| ||||      ||||    
T  28279721 agggtgtgtttggattgagagtctataaggggaagggaggagagggtttacttttcctttttaaattatggaatatataacatgttttttctaaaataaa 28279622  T
Q  141 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 229  Q
     |||||||  ||||||||||| ||||||||| |||||| |  ||  | || |||||||||| ||||| ||||||||  ||| |||||||    
T  28279621 ctaagtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcataatgtccataatttaaaaa 28279533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 6382357 - 6382393
Alignment:
Q  93 ctcacttttattttttaaattacgaacaatgtaaaat 129  Q
    |||||||||||||||||||| ||||||||||||||||    
T  6382357 ctcacttttattttttaaatcacgaacaatgtaaaat 6382393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 10476026 - 10476090
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaa 111  Q
    |||||||||||| || ||| |||||||||||||||||| | ||||| | |||||| |||||||||    
T  10476026 agggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaa 10476090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 20147114 - 20147074
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggg 87  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  20147114 agggtgtgtttggattgagggtttaggaggggaagggaggg 20147074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 10650660 - 10650589
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||| || ||||| ||||||||||||||| ||  | | ||||||  |||||||||||||    
T  10650660 ttagggtgtgtttggattgaaagtttgggaggggaagggaggagaaagtttactttttgtttttaaattacg 10650589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 2184060 - 2183974
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgt 131  Q
    ||||||||||||||||||||| ||||| |||||||||  ||  ||||||| | ||||  | ||||||||||| ||| | ||||||||    
T  2184060 ttagggtgtgtttggatggagggtttaagaggggaagatagaagagggcttatttttcctctttaaattacggacattataaaatgt 2183974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 11756876 - 11756949
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaac 119  Q
    ||||| ||||||||||| ||| |||||||||||| ||||| ||||| | |   ||||||||||||||||||||||    
T  11756876 ttaggatgtgtttggattgagggtttaggagggg-agggatgggagagtttgtttttattttttaaattacgaac 11756949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 22023605 - 22023571
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggagggga 79  Q
    ||||||||||||||||||||| |||||||||||||    
T  22023605 ttagggtgtgtttggatggagggtttaggagggga 22023571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 37551651 - 37551585
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaa 111  Q
    ||||||||||||||||||||| ||||| ||||| ||||||| ||| || | ||||||  ||||||||    
T  37551651 ttagggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaa 37551585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 37654481 - 37654415
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaa 111  Q
    ||||||||||||||||||||| ||||| ||||| ||||||| ||| || | ||||||  ||||||||    
T  37654481 ttagggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaa 37654415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 11437188 - 11437094
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggag---ggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 136  Q
    ||||||||| ||||||| ||| |||||| ||||||||||| |||||   | || |||||| ||||||||| || ||||| | |||||||| ||||    
T  11437188 ttagggtgtttttggattgagggtttagaaggggaagggaagggaggacgacttacttttcttttttaaaataggaacactataaaatgtttttt 11437094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 16502034 - 16501966
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggagggg-agggctcacttttattttttaaattacg 116  Q
    ||||||||||||| ||| ||||||||||| ||| |||||| ||   | |||||||||||||||||||||    
T  16502034 ggtgtgtttggattgagggtttaggagggaaagagagggggagaaattacttttattttttaaattacg 16501966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 18199528 - 18199572
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagg 91  Q
    ||||| |||||||||| ||||||| |||||| |||||||||||||    
T  18199528 agggtatgtttggatgaagagtttcggagggaaagggaggggagg 18199572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 37607140 - 37607100
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggag 85  Q
    ||||||||||||||||||||| ||||| ||||| |||||||    
T  37607140 ttagggtgtgtttggatggagggtttacgagggaaagggag 37607100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 37779349 - 37779309
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggag 85  Q
    ||||||||||||||||||||| ||||| ||||| |||||||    
T  37779349 ttagggtgtgtttggatggagggtttacgagggaaagggag 37779309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 40815297 - 40815365
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    ||||||||||||||| ||   ||||||||||||||||| | ||||  | |||||| |||||||||||||    
T  40815297 agggtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattac 40815365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 3e-67; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 47 - 251
Target Start/End: Complemental strand, 12022387 - 12022178
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----t 141  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||     |    
T  12022387 agggtgtgtttggattgagggtttaggaggggaaaggaggggagggctcacttttattttttaaattacggacaatgtaaaatgtttttttaaaataaat 12022288  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 241  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||||||||||| ||||||||||||||||||||   ||| ||||||||| || ||||||    
T  12022287 taagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgttcgtaatttaaaaaagaaaagtaagc 12022188  T
Q  242 cctcccctcc 251  Q
    ||||||||||    
T  12022187 cctcccctcc 12022178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 82 - 279
Target Start/End: Original strand, 39449339 - 39449546
Alignment:
Q  82 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaa-----attaagtgtttttgaagtattacatgatcattgatca 176  Q
    |||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||     ||||| |||||||||||||||| ||||||||| ||||    
T  39449339 ggagaggagagctcacttttattttttaaattacgaacaatgtgaaatgtctttttaagataaattaactgtttttgaagtattatatgatcattaatca 39449438  T
Q  177 tgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag-----ccctcccctcctaaaccctcttcccaaacac 271  Q
    || ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||     |||||||||||||||| ||||||||||||||    
T  39449439 tgttgttaattcaattttttaaaaataattttataacgtctttaaattaaaaaaggaatgtaagccctcccctcccctcctaaactctcttcccaaacac 39449538  T
Q  272 acccttaa 279  Q
    ||||||||    
T  39449539 acccttaa 39449546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 47 - 240
Target Start/End: Complemental strand, 8815385 - 8815187
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaatt 142  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||| |||||||||| ||||    ||||||    
T  8815385 agggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacgaacactgtaaaatgttttttcaaataaatt 8815286  T
Q  143 -aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag 240  Q
     ||||||||||||||||||| || |||||| |||||| |||| |||||||||| |||||||||||||||||||||  ||| ||||||||| || |||||    
T  8815285 aaagtgtttttgaagtattatataatcatttatcatgttgttgattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaag 8815187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 47 - 251
Target Start/End: Original strand, 43732679 - 43732896
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt---------- 136  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||||              
T  43732679 agggtgtgtttggattgagggtttaggaggggaagggagaggaggactcacttttattttttaaattactaacaatgtaaaatgtttttttttttaaaaa 43732778  T
Q  137 ---taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaagga 233  Q
       ||||||||||||||||||||||||| ||||||||| |||||  |||||||||||||||  ||||||||||||||||||||  ||| ||||||||| |    
T  43732779 aaataaattaagtgtttttgaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcattttataatgtccgtaatttaaaaaagaa 43732878  T
Q  234 atgtaagccctcccctcc 251  Q
    | |||| |||||||||||    
T  43732879 aagtaaaccctcccctcc 43732896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 45 - 251
Target Start/End: Original strand, 30365128 - 30365339
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 139  Q
    ||||||||||||||||| ||| |||||||||| ||| ||||||||| | ||||||||| ||||||||||||||||||  |||||| | ||||     |||    
T  30365128 ttagggtgtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattacgaacaacataaaatatttttttagaataa 30365227  T
Q  140 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaa 239  Q
    |||||||||||||||||| ||| || |||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||| ||||||||| || | ||    
T  30365228 attaagtgtttttgaagtgttatataatcatttatcatgttgttaattcaattttctaaaaatcatttcataatgtctgtaatttaaaaaagaaaaggaa 30365327  T
Q  240 gccctcccctcc 251  Q
    ||||||||||||    
T  30365328 gccctcccctcc 30365339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 49 - 229
Target Start/End: Original strand, 16024155 - 16024341
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaatt 142  Q
    ||||||||||||| ||| |||||||| ||||||||||||||| ||||| ||||  ||||||||||||||||||| |||||||  ||||      ||||||    
T  16024155 ggtgtgtttggattgagggtttaggaagggaagggaggggagagctcagtttttgtttttaaattacgaacaatataaaatgattttttttaaataaatt 16024254  T
Q  143 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 229  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||  ||| |||||||    
T  16024255 aagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa 16024341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 50 - 276
Target Start/End: Complemental strand, 20472933 - 20472702
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaa 144  Q
    |||||||||||| ||  |||||| |||| |||||| || ||| ||||||||||||||||||||||||||||||||||  ||| ||||     ||||| ||    
T  20472933 gtgtgtttggattgaaggtttagaagggaaagggaaggaaggactcacttttattttttaaattacgaacaatgtaagttgttttttaaaaataaatcaa 20472834  T
Q  145 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccct 244  Q
    ||||||||||||||||| ||||||||  |||||  ||||||||||||||| ||||| | |||||||||||||| ||| ||||||||| || |||||||||    
T  20472833 gtgtttttgaagtattatatgatcatatatcatattgttaattcaattttctaaaatttattttataatgtctgtaatttaaaaaagaaaagtaagccct 20472734  T
Q  245 cccctcctaaaccctcttcccaaacacaccct 276  Q
     ||||| ||| ||||||  |||||||||||||    
T  20472733 tccctcttaatccctctatccaaacacaccct 20472702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 47 - 255
Target Start/End: Original strand, 9933240 - 9933454
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt------aaa 140  Q
    ||||||||||||||| ||  |||||||||| ||| |||||| ||   |||||||||| ||||||||||||||||||||||||| | |||||      |||    
T  9933240 agggtgtgtttggattgaaggtttaggaggagaaaggagggaagaattcacttttatattttaaattacgaacaatgtaaaatatttttttcaaaataaa 9933339  T
Q  141 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag 240  Q
    |||||| |||||||| ||||| ||||||||| |||||| ||||||||||||||||| |||||||||||||||||||   |  ||||||||| || ||||     
T  9933340 ttaagtatttttgaaatattatatgatcatttatcatgttgttaattcaatttttttaaaatcattttataatgtccaaattttaaaaaagaaaagtaaa 9933439  T
Q  241 ccctcccctcctaaa 255  Q
    |||||||||||||||    
T  9933440 ccctcccctcctaaa 9933454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 210
Target Start/End: Original strand, 43826333 - 43826500
Alignment:
Q  48 gggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaatt 142  Q
    |||||||||| ||| |||  ||||||||||||| ||||||||| | ||| ||||||||| |||||||||||||||||||||||| ||||     ||| ||    
T  43826333 gggtgtgtttagattgaggatttaggaggggaatggaggggagagttcatttttattttgtaaattacgaacaatgtaaaatgttttttcaaaataagtt 43826432  T
Q  143 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttat 210  Q
    ||||||||||||||||||  ||||||||| |||||| ||||||||||||||| ||||||| |||||||    
T  43826433 aagtgtttttgaagtattttatgatcatttatcatgttgttaattcaattttctaaaaattattttat 43826500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 71 - 248
Target Start/End: Original strand, 34196332 - 34196514
Alignment:
Q  71 aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt----aaat---taagtgtttttgaagtattaca 163  Q
    |||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| || ||| |||||    ||||   |||||||||||||||||||| |    
T  34196332 aggaggggaagggagggggggg-tcactttaattttttaaattacgaacaatgtgaagtgtttttttttttaaataaataagtgtttttgaagtattata 34196430  T
Q  164 tgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccc 248  Q
    ||||| || ||| || ||||||||||||||| |||||||||||||||||||||| | |||| |||||| || |||||||||||||    
T  34196431 tgatcgtttatcttgttgttaattcaattttctaaaaatcattttataatgtctgt-aatttaaaaagaaaagtaagccctcccc 34196514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 45 - 229
Target Start/End: Complemental strand, 8672040 - 8671849
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa---- 140  Q
    ||||||||||||||||| |||  ||||| ||||||||| |||||| | || | |||||||||||||||||| || |||||||||||| ||||||||        
T  8672040 ttagggtgtgtttggattgaggatttagaaggggaaggtaggggatgacttaattttattttttaaattacaaataatgtaaaatgtatttttaaaataa 8671941  T
Q  141 -ttaagtgtttttgaagtattacatgatcattgat--catgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 229  Q
     |||||| |||||||||||||| |||||||||  |  |||  ||||||||||||||| |||||||||||||||||||||  ||| |||||||    
T  8671940 attaagtatttttgaagtattatatgatcatttttttcatattgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa 8671849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 47 - 208
Target Start/End: Complemental strand, 9434543 - 9434377
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt------aaa 140  Q
    ||||||||||||||| ||| ||||| ||||| ||  || || || | ||||||||||||||||||||| |||||||||||||||| |||||      |||    
T  9434543 agggtgtgtttggattgagggtttacgaggg-aatagatggaagagttcacttttattttttaaattaggaacaatgtaaaatgttttttttttaataaa 9434445  T
Q  141 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcatttt 208  Q
    ||||||| ||||||||||||| || |||||| |||||| ||||||||||||||||||||||| |||||    
T  9434444 ttaagtggttttgaagtattatattatcatttatcatgttgttaattcaattttttaaaaattatttt 9434377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 216
Target Start/End: Complemental strand, 40633232 - 40633059
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 141  Q
    ||||||||||||||| ||| |||| ||| ||||||| || |||||  ||| ||||| ||||| |||||||||||| |||||||||  |||     |||||    
T  40633232 agggtgtgtttggattgagggtttcggaagggaaggaagcggaggt-tcaattttaatttttcaattacgaacaacgtaaaatgttgttttaaaataaat 40633134  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 216  Q
    |||||||||||||| ||||| |  |||||| |||||| ||||||||||||||| ||||||| |||||||||||||    
T  40633133 taagtgtttttgaaatattatacaatcatttatcatgttgttaattcaattttctaaaaattattttataatgtc 40633059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 50 - 214
Target Start/End: Original strand, 6453185 - 6453356
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttatttttt-aaattacgaacaatgtaaaatgtctttttaaa------tt 142  Q
    |||| ||||||| ||| |||| ||||   ||||||||||| | |||||||||||||||| |||||||||| |||||||||| | ||||| ||      ||    
T  6453185 gtgtatttggattgagggtttgggagaaaaagggaggggaagactcacttttatttttttaaattacgaataatgtaaaatattttttttaaaatatatt 6453284  T
Q  143 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatg 214  Q
    ||||||||||||||||||| ||||| | | |||||| | ||||||||||||| |||||||||||||||||||    
T  6453285 aagtgtttttgaagtattatatgattacttatcatgttattaattcaattttctaaaaatcattttataatg 6453356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 7394701 - 7394615
Alignment:
Q  51 tgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt 137  Q
    ||||||||||| ||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||| || |||||    
T  7394701 tgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaattacgaacaatgcaaaacgttttttt 7394615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 43732933 - 43732848
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| |||||||||||||| ||| | |||||||    
T  43732933 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatg 43732848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 12022140 - 12022226
Alignment:
Q  45 ttagggtgtgtttggatggagagttt-aggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    |||||||||||| |||||||| |||| || ||||||||||||||||||||| |||||| |||||||||||||||||| | |||||||    
T  12022140 ttagggtgtgttaggatggagggtttgagaaggggaagggaggggagggcttacttttcttttttaaattacgaacattataaaatg 12022226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 2248450 - 2248521
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| | ||| |||  ||||||||||||||    
T  2248450 ttagggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacg 2248521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 216
Target Start/End: Original strand, 29937614 - 29937676
Alignment:
Q  154 aagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 216  Q
    |||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||    
T  29937614 aagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtc 29937676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 8815139 - 8815224
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    ||||||||||||||||||||| ||||||||||||||| |||| || | || |||||| |||||||||||||| ||| | |||||||    
T  8815139 ttagggtgtgtttggatggagggtttaggaggggaagagaggtgatgacttacttttcttttttaaattacggacattataaaatg 8815224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 31543318 - 31543249
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatta 114  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||||| | |||||| ||||||||||||    
T  31543318 ttagggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatta 31543249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 34634387 - 34634318
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||||||||||||||||||||||||||||||||| | ||||| ||| ||||  |||||||||||||    
T  34634387 agggtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacg 34634318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 36309081 - 36308994
Alignment:
Q  53 tgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 140  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||||  | ||||||||||| ||| ||| |||| | ||||||||    
T  36309081 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattacgtacattgtgaaatatatttttaaa 36308994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 1027092 - 1027023
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||||||||||  || |||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  1027092 agggtgtgtttggattaagggtttaggaagggaagggagggaagggttcacttttcttttttaaattacg 1027023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 31543072 - 31543141
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||||| | ||||||  |||||||||||||    
T  31543072 agggtatgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacg 31543141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 40632994 - 40633051
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcactttta 102  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||| |||||||    
T  40632994 ttagggtgtgtttgaatggagggtttaggaggggaagggagaggagggcttactttta 40633051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 30365374 - 30365306
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    |||||||||||||||||||  ||||| |||| ||||||||||||||||  ||||| |||||||||||||    
T  30365374 agggtgtgtttggatggaggatttagaagggtaagggaggggagggcttccttttcttttttaaattac 30365306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 31738671 - 31738585
Alignment:
Q  43 agttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 129  Q
    ||||||||||||||||||||||| |||||||||||||||  ||||||||| | |  |||  ||||||||||||| ||| | ||||||    
T  31738671 agttagggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggacactataaaat 31738585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 34196553 - 34196492
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttt 107  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||||| |||||| |||||    
T  34196553 ttagggtgcgtttggatggagggtttaggaggggaaggg-ggggagggcttacttttcttttt 34196492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 30582033 - 30581988
Alignment:
Q  71 aggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||    
T  30582033 aggaggggaagggaggggagggcttacttttcttttttaaattacg 30581988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 41103504 - 41103549
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggaggg 92  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  41103504 agggtgtgtttggatggagggtttaggaggggaagagaggggaggg 41103549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 9718723 - 9718651
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaac 119  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||  | | |||||| |||||||||||| ||||    
T  9718723 agggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaattatgaac 9718651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 16024394 - 16024315
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    ||||||||||||||||  ||||||||||||||||||||||| | | ||||||  ||||||||||||| ||| | |||||||    
T  16024394 gtgtgtttggatggaggatttaggaggggaagggaggggagagtttactttt-ctttttaaattacggacattataaaatg 16024315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 1281149 - 1281212
Alignment:
Q  53 tgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||| ||| |||||||||||||||||| | ||||| | |||||| ||||||||||||||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacg 1281212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 3726861 - 3726900
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaaggga 84  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  3726861 ttagggtgtgtttggatggagggtttaggaggggaaggga 3726900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 2482019 - 2481977
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggg 87  Q
    ||||||| ||||||||||||| |||||||||||||||||||||    
T  2482019 ttagggtatgtttggatggagggtttaggaggggaagggaggg 2481977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 7503200 - 7503131
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatta 114  Q
    ||||||||||||||||| |||  ||| |||||||| |||||||||||| | ||||||  |||||||||||    
T  7503200 ttagggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaatta 7503131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 24243050 - 24243137
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 136  Q
    ||||||||||||||||||||||||| || ||||||||| |||| | || ||||||  |||| |||||||| ||| | |||||||||||||    
T  24243050 agggtgtgtttggatggagagtttaaga-gggaagggaagggatgacttacttttcattttgaaattacg-acactataaaatgtctttt 24243137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 30479721 - 30479806
Alignment:
Q  51 tgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 136  Q
    |||||||||||||||  ||||||||||| | ||||||||| | ||||||||  ||||||||||||  ||| | | |||||||||||    
T  30479721 tgtgtttggatggaggatttaggagggggatggaggggagagttcacttttcatttttaaattacagacactatgaaatgtctttt 30479806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 7979138 - 7979209
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||| ||||||||||| ||| |||||| || ||||||||| |||| | | |||||| ||||||||||||||    
T  7979138 ttaggatgtgtttggattgagggtttagaagaggaagggagaggagagtttacttttcttttttaaattacg 7979209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 11785772 - 11785725
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggaggg 92  Q
    ||||||||||||||||||||| ||||||||||| ||| || |||||||    
T  11785772 ttagggtgtgtttggatggagggtttaggagggtaagagaagggaggg 11785725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 216
Target Start/End: Complemental strand, 24243287 - 24243118
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaa 144  Q
    |||||||||||| ||| ||||| | |||||| ||||||||||||| |||||  |||| ||||||||  ||||| | | || | ||||| ||     ||||    
T  24243287 gtgtgtttggatcgagggtttaag-ggggaatggaggggagggcttactttccttttctaaattacagacaatatgagatctttttttcaaattaattaa 24243189  T
Q  145 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 216  Q
    ||||  ||||||||||| ||||||||| |||||| | ||| ||||| |||||||||  ||||||||| ||||    
T  24243188 gtgtgattgaagtattatatgatcatttatcatgttattatttcaa-tttttaaaagacattttatagtgtc 24243118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 2412962 - 2413027
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    |||| |||||||||||||||| |||||||||||||     |||||||||| ||| || |||||||||||||    
T  2412962 ttagagtgtgtttggatggagggtttaggagggga-----ggggagggcttactattcttttttaaattac 2413027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 13404976 - 13405041
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaat 112  Q
    |||||||| |||||| ||| |||||||||||||||||| |||||   | |||||| ||||||||||    
T  13404976 agggtgtggttggattgagggtttaggaggggaagggatgggagaaattacttttcttttttaaat 13405041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 38198196 - 38198135
Alignment:
Q  139 aattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaa 200  Q
    ||||||||||  ||||||||||| ||||||||  |||||| ||||| |||||||||| ||||    
T  38198196 aattaagtgtgattgaagtattatatgatcatatatcatgttgttatttcaatttttaaaaa 38198135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 9718489 - 9718521
Alignment:
Q  47 agggtgtgtttggatggagagtttaggagggga 79  Q
    ||||||||||||||||||| |||||||||||||    
T  9718489 agggtgtgtttggatggagggtttaggagggga 9718521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 112
Target Start/End: Original strand, 11033417 - 11033482
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaat 112  Q
    ||||||||||||||||| ||| |||||| || |||||||||||  ||| | |||||| ||||||||||    
T  11033417 ttagggtgtgtttggattgagggtttagaagaggaagggaggg--gggtttacttttcttttttaaat 11033482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 11575646 - 11575582
Alignment:
Q  51 tgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    |||||||||||  || |||||||| | ||||||||||||||| | ||||||  ||||||||||||    
T  11575646 tgtgtttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattac 11575582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 27487087 - 27487131
Alignment:
Q  139 aattaagtgtttttgaagtattacatgatcattgatcatgctgtt 183  Q
    ||||||||||| ||||||||||| ||||||||| |||||| ||||    
T  27487087 aattaagtgttattgaagtattatatgatcatttatcatgttgtt 27487131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 3e-67; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 47 - 251
Target Start/End: Original strand, 33519048 - 33519257
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt-----aaat 141  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||     ||||    
T  33519048 agggagtgtttggatggaggttttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatataaaatgtttttttgaaataaat 33519147  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 241  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||| ||||| ||| || |||| |    
T  33519148 taagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtctgtaatttaaagaagaaaagtaatc 33519247  T
Q  242 cctcccctcc 251  Q
    ||||||||||    
T  33519248 cctcccctcc 33519257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 47 - 216
Target Start/End: Original strand, 37925841 - 37926015
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----t 141  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||     |    
T  37925841 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacgaacaatgtaaaatgttttttttaaatagat 37925940  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 216  Q
    |||||||||||||||||||| || |||||  |||||| ||||||||||||||| |||| ||||||||||||||||    
T  37925941 taagtgtttttgaagtattatatcatcatcaatcatgttgttaattcaattttctaaacatcattttataatgtc 37926015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 47 - 251
Target Start/End: Complemental strand, 36267797 - 36267588
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 141  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||| ||||     || |     
T  36267797 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcatttttattttttaaattacaaccaatgtaaaatgttttttcaaaatatag 36267698  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 241  Q
    |||||||||||||||||||| ||||||||| |||||  |||| |||||||||| |||||||||||||||||| ||  ||| ||||||||| ||  |||||    
T  36267697 taagtgtttttgaagtattatatgatcatttatcatattgttgattcaattttctaaaaatcattttataatatccgtaatttaaaaaagaaaactaagc 36267598  T
Q  242 cctcccctcc 251  Q
    ||||||||||    
T  36267597 cctcccctcc 36267588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 45 - 260
Target Start/End: Original strand, 39646467 - 39646687
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 139  Q
    ||||||||||||||||| ||  ||||||||| |||||||||||||||  ||||||||||||||||||||| |||||||||||||| | ||||     |||    
T  39646467 ttagggtgtgtttggattgacggtttaggagaggaagggaggggaggaatcacttttattttttaaattatgaacaatgtaaaatatatttttaaaataa 39646566  T
Q  140 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaa 239  Q
    ||||| |||||||||||||||| || |||||  |||||| ||||||||||||||| |||||||||||||||||||||  ||| ||||||||  || || |    
T  39646567 attaactgtttttgaagtattatatcatcatcaatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaataaaagtga 39646666  T
Q  240 gccctcccctcctaaaccctc 260  Q
    | | |||||||||||||||||    
T  39646667 gtcatcccctcctaaaccctc 39646687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 45 - 231
Target Start/End: Complemental strand, 28074354 - 28074158
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattt--tttaaattacgaacaatgtaaaatgtctttt------ 136  Q
    ||||||||||||||||| ||| ||||||||| |||||| ||||||||| ||||||||||||  ||| ||| |||||||||||||||||| ||||          
T  28074354 ttagggtgtgtttggattgagggtttaggagaggaaggaaggggagggatcacttttatttatttttaatcacgaacaatgtaaaatgttttttgtttta 28074255  T
Q  137 --taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 231  Q
      ||||||||||||||||||||||||| ||||||||| |||| | ||||||||||||||| |||||||||||||||||||||  ||| |||||||||    
T  28074254 aataaattaagtgtttttgaagtattatatgatcatttatcaggttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaag 28074158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 67 - 279
Target Start/End: Original strand, 48013523 - 48013740
Alignment:
Q  67 gtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtatt- 160  Q
    |||||||||||||||||||||||| | || ||||||||||| ||||||||||||||||||||||| ||||||||     |||||||||||||||  |||     
T  48013523 gtttaggaggggaagggaggggagcgttcgcttttattttt-aaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaaaaattc 48013621  T
Q  161 acatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctc 260  Q
    | ||||||||| |||||| ||||||||||||||| ||||||| ||||||||| |||| | | ||||||| | || |||||| |||||||||||| |||||    
T  48013622 atatgatcatttatcatgttgttaattcaattttctaaaaattattttataaagtctgtgatttaaaaacgaaaagtaagctctcccctcctaatccctc 48013721  T
Q  261 ttcccaaacacacccttaa 279  Q
       ||||||||||||||||    
T  48013722 catccaaacacacccttaa 48013740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 48881525 - 48881640
Alignment:
Q  14 catagatgaaaatttggtgatgacttgaaagttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatt 113  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||| |||||||||||    
T  48881525 catagatgaaaaattggtgatgacttgaaagttagggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaatt 48881624  T
Q  114 acgaacaatgtaaaat 129  Q
    ||| ||| | ||||||    
T  48881625 acggacattataaaat 48881640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 49 - 251
Target Start/End: Original strand, 37620776 - 37620983
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaatta 143  Q
    ||||||||||||| ||| |||| ||||||||||||||||||| | ||||||||  |||| |||||| |||||||||||||||  ||||     |||||||    
T  37620776 ggtgtgtttggattgagggtttgggaggggaagggaggggagagttcactttttattttcaaattatgaacaatgtaaaatgattttttaaaataaatta 37620875  T
Q  144 agtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccc 243  Q
    | |||||||||||||||| || ||| || |||||| || ||||||||||||  ||||||||||||||||||||  ||| ||||||||| || | || |||    
T  37620876 aatgtttttgaagtattatataatcttttatcatgttgataattcaattttccaaaaatcattttataatgtccataatttaaaaaagaaaagcaaaccc 37620975  T
Q  244 tcccctcc 251  Q
    ||||||||    
T  37620976 tcccctcc 37620983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 50 - 256
Target Start/End: Original strand, 21857350 - 21857560
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaa 144  Q
    |||||||||||| ||  |||||| ||||||||||||  ||| | ||| ||||||||||||||||| ||||||| ||||||   ||||||||     ||||    
T  21857350 gtgtgtttggatcgaaggtttagaaggggaagggagtagagagttcatttttattttttaaattaagaacaatataaaatccttttttaaaataaattaa 21857449  T
Q  145 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccct 244  Q
    ||||||||||| ||||  ||||||||| |||||| ||||||||||||||| |||||||||||||||||||| |   |||||||| || || ||||| |||    
T  21857450 gtgtttttgaaatattgtatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgt-tcgtaattaaaagagaaaagtaagtcct 21857548  T
Q  245 cccctcctaaac 256  Q
    | ||||||||||    
T  21857549 ctcctcctaaac 21857560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 222
Target Start/End: Original strand, 8122142 - 8122328
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 139  Q
    |||||||||||||| || |||| ||||||||| |||||||||||| | ||||||||||||||||||||||||||| || |||||| |  |||     |||    
T  8122142 ttagggtgtgtttgaattgagaatttaggaggagaagggaggggaagactcacttttattttttaaattacgaaccatataaaatattgttttaaaataa 8122241  T
Q  140 attaagtgtttttgaagt----attacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaa 222  Q
    ||||| ||||||||||||    |||| ||||| ||| |||||  ||||||||||||||| ||||||| |||||||||||||| ||||    
T  8122242 attaattgtttttgaagtattaattatatgataatttatcatcttgttaattcaattttctaaaaattattttataatgtctataaa 8122328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 246
Target Start/End: Original strand, 35421967 - 35422168
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaa 144  Q
    |||||||||||| |||  |||| |||| ||||||||  || | || | |||||||||||||||||| ||||||||||||||| ||||||||     ||||    
T  35421967 gtgtgtttggattgaggatttaagaggtgaagggagaagatgacttatttttattttttaaattacaaacaatgtaaaatgtttttttaaaataaattaa 35422066  T
Q  145 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccct 244  Q
    ||||||||||||||| | ||||| ||| || ||| ||||||||||||||| ||||||| |||||||||||||  ||| || |||||| || |||| ||||    
T  35422067 gtgtttttgaagtatcatatgattatttattatgttgttaattcaattttctaaaaattattttataatgtccgtaattttaaaaagaaaagtaaaccct 35422166  T
Q  245 cc 246  Q
    ||    
T  35422167 cc 35422168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 82 - 251
Target Start/End: Complemental strand, 48881768 - 48881593
Alignment:
Q  82 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa------ttaagtgtttttgaagtattacatgatcattgatc 175  Q
    |||||||| || ||||||||| |||||||||||| ||||| ||||||||| ||||||||      |||||| ||||||||| |||| || |||||| |||    
T  48881768 ggaggggaaggttcacttttaatttttaaattacaaacaacgtaaaatgtttttttaaaaataaattaagtatttttgaagcattatataatcatttatc 48881669  T
Q  176 atgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcc 251  Q
    ||| ||||||||||||||| | ||||| |||||||||||||  ||| ||||||||| || ||||||| ||||||||    
T  48881668 atgttgttaattcaattttctgaaaattattttataatgtccgtaatttaaaaaagaaaagtaagccatcccctcc 48881593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 251
Target Start/End: Complemental strand, 31364285 - 31364080
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttt------tattttttaaattacgaacaatgtaaaatgtctttttaaatta 143  Q
    |||||||||||| ||| ||||||||||||||||||||  |||| | |||||      |||||||||||||| |||||||||||||||| |||||||| ||    
T  31364285 gtgtgtttggattgagggtttaggaggggaagggagg--agggtttactttattttttattttttaaattaggaacaatgtaaaatgtttttttaaaata 31364188  T
Q  144 a---gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag 240  Q
    |   ||||||||||||||||| ||||||||   | |||  ||| |||||||||| | |||||||||||||||||||  ||| ||| ||||| || |||||    
T  31364187 agttgtgtttttgaagtattatatgatcat---ttatgtcgttgattcaattttcttaaaatcattttataatgtccgtaatttagaaaagaaaagtaag 31364091  T
Q  241 ccctcccctcc 251  Q
    | |||||||||    
T  31364090 ctctcccctcc 31364080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 48 - 194
Target Start/End: Complemental strand, 12671079 - 12670928
Alignment:
Q  48 gggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaatt 142  Q
    |||||||||||||| |||  |||||||| | ||  ||||| | | ||||||||||||||||||| |||||||||||| |||||| ||||     | ||||    
T  12671079 gggtgtgtttggattgaggttttaggagtgaaacagagggaaagactcacttttattttttaaactacgaacaatgtgaaatgttttttgtaaatgaatt 12670980  T
Q  143 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaatttt 194  Q
    ||||||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  12670979 aagtgtttttgaagtattatatgatcatttatcatgttgttaattcaatttt 12670928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 67 - 229
Target Start/End: Original strand, 48015230 - 48015394
Alignment:
Q  67 gtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt------aaattaagtgtttttgaagtatt 160  Q
    ||||| || ||||||||||||||| | || ||||||| |||||||||||    |||||||||||| |||||      ||||||||||||||||||  |||    
T  48015230 gtttacgaagggaagggaggggagcgttcgcttttatcttttaaattac----aatgtaaaatgtttttttttaaataaattaagtgtttttgaaaaatt 48015325  T
Q  161 acatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 229  Q
    | ||||||||| |||||| |||||||||||||||  |||||| ||||||||| |||| ||| |||||||    
T  48015326 atatgatcatttatcatgttgttaattcaattttccaaaaattattttataaagtctgtaatttaaaaa 48015394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 138 - 276
Target Start/End: Complemental strand, 23116408 - 23116269
Alignment:
Q  138 aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatca-ttttataatgtctttaaattaaaaaaggaatg 236  Q
    |||||||||||  ||||||||||| || |||||| |||||| || || ||||||||||||| || || ||||||| ||||| ||| ||||||||| || |    
T  23116408 aaattaagtgtgattgaagtattatataatcatttatcatgttgctatttcaattttttaataaacacttttatagtgtctgtaatttaaaaaagaaaag 23116309  T
Q  237 taagccctcccctcctaaaccctcttcccaaacacaccct 276  Q
    ||||||||||| ||||||||||||   |||||||||||||    
T  23116308 taagccctcccttcctaaaccctccatccaaacacaccct 23116269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 36267551 - 36267622
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  36267551 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattacg 36267622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 103 - 212
Target Start/End: Complemental strand, 3216048 - 3215934
Alignment:
Q  103 ttttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaatttttta 197  Q
    |||||||||||| |||||||||||||||| ||||     ||||| |||| ||| |||||||||| ||||||||| |||||  ||||||||||||||| ||    
T  3216048 ttttttaaattatgaacaatgtaaaatgttttttcaaaataaatcaagtatttatgaagtattatatgatcatttatcatattgttaattcaattttcta 3215949  T
Q  198 aaaatcattttataa 212  Q
    |||||||||||||||    
T  3215948 aaaatcattttataa 3215934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 12682972 - 12682854
Alignment:
Q  48 gggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaatt 142  Q
    |||||||||||||| |||  |||||||| | ||  ||||| | ||||||||||||||||||||| ||||||||||||||||||| ||||     ||||||    
T  12682972 gggtgtgtttggattgaggttttaggagcgaaacagagggaaaggctcacttttattttttaaactacgaacaatgtaaaatgtattttttaaataaatt 12682873  T
Q  143 aagtgtttttgaagtatta 161  Q
    |||||||||||||||||||    
T  12682872 aagtgtttttgaagtatta 12682854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 16833684 - 16833867
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggagggg-aggg-ctcacttttattttttaaattacgaacaatgtaaaatgtcttttt--------- 137  Q
    ||||||||||||| ||| ||||| ||||| |||||| | | || | || |||||||||||||||||||||||||||||||||||| |||||             
T  16833684 ggtgtgtttggattgagggtttaagagggaaagggatgagtagagacttacttttattttttaaattacgaacaatgtaaaatgtttttttttttttttt 16833783  T
Q  138 -------aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatg 214  Q
           |||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| ||||||| || ||||||||    
T  16833784 taaaaaaaaattaagtgtttttgaagtattacatgatcatttatcatgttattaattcaattttataaaaattatattataatg 16833867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 93 - 231
Target Start/End: Original strand, 3143526 - 3143673
Alignment:
Q  93 ctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgctg----tt 183  Q
    |||| |||| ||||||||||||  ||||||||||||| | ||| ||||     |||||| |||||||||||||| ||||||||| |||||  ||    ||    
T  3143526 ctcaatttttttttttaaattataaacaatgtaaaatatttttataaaataaattaagtttttttgaagtattatatgatcatttatcattttgttaatt 3143625  T
Q  184 aattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 231  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||||||    
T  3143626 aattcaattttttaaaaattattttataatgtcattaatttaaaaaag 3143673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 33519294 - 33519224
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| || ||||||||||    
T  33519294 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattac 33519224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 39856109 - 39856040
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| | |||||| ||||||||||||||    
T  39856109 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacg 39856040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 18795840 - 18795746
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 140  Q
    |||| |||||||||||| |||||||||| ||||||||| |||||| ||||   |||| |||||||||||||||||||| |||||||| ||||||||    
T  18795840 ttagagtgtgtttggattgagagtttagaaggggaagg-aggggaaggcttgattttcttttttaaattacgaacaatataaaatgtttttttaaa 18795746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 28074103 - 28074186
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||  ||||||||| |||||||||||||| ||| | |||||||    
T  28074103 agggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacggacattataaaatg 28074186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 18231830 - 18231757
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaaca 120  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  | ||||||  |||||||||||| ||||    
T  18231830 agggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattacaaaca 18231757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 41496955 - 41497032
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaat 122  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |  | ||||||  ||||||||||||| |||||    
T  41496955 ttagggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggacaat 41497032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 4833531 - 4833599
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||  ||||||||||||    
T  4833531 agggtatgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattac 4833599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 30592388 - 30592292
Alignment:
Q  151 ttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctccc 247  Q
    ||||||||||| ||||| ||| |||||    ||| |||||||||||||||||||||||||| ||||| ||| ||||||||| || ||||||||||||    
T  30592388 ttgaagtattatatgattatttatcatatgattatttcaattttttaaaaatcattttatagtgtctgtaatttaaaaaagaaaagtaagccctccc 30592292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 47390853 - 47390948
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 140  Q
    ||||||||||||||||| ||| | ||||||||||||||||| |||||| | |||||| |||||||||||| |||| || ||| |||| ||| ||||    
T  47390853 ttagggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaattatgaactatataacatgtttttctaaa 47390948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 40196530 - 40196616
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgt 131  Q
    ||||||||||||||||||||| |||| |||||||||||||| |||||| | ||||||  ||||| ||||||| ||| | ||||||||    
T  40196530 ttagggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaatgt 40196616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 1051742 - 1051670
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaac 119  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||  | | |||| |||||||||||||||||    
T  1051742 agggtgtgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaattacgaac 1051670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 30592253 - 30592321
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    ||||||| |||||||||||  |||||||||| |||||| ||||||||| |||||| |||||||||||||    
T  30592253 agggtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattac 30592321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 31571713 - 31571645
Alignment:
Q  48 gggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||||||||| ||| ||||||||||||||| |||||||| | | |||||| ||||||||||||||    
T  31571713 gggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacg 31571645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 48147468 - 48147404
Alignment:
Q  63 gagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaa 127  Q
    ||||||||||||||| ||| |||| ||| |||||||||||||||||||||||| || ||||||||    
T  48147468 gagagtttaggagggaaagagaggagagagctcacttttattttttaaattacaaataatgtaaa 48147404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 240
Target Start/End: Complemental strand, 2087892 - 2087785
Alignment:
Q  137 taaattaagtgtttttgaagtattacatgatca----ttgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaagg 232  Q
    |||||| | |||||||||||||||| |||||||    || |||||| |||||||||| |||||||||||| |||||||||| ||  ||| |||||||||     
T  2087892 taaatttaatgtttttgaagtattatatgatcaattatttatcatgttgttaattcatttttttaaaaattattttataatatccgtaatttaaaaaaga 2087793  T
Q  233 aatgtaag 240  Q
    || |||||    
T  2087792 aaagtaag 2087785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 31553183 - 31553243
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttt 107  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| ||||    
T  31553183 ttagggtgtgtttggatggag-gtttaggaggggaagggaggagaggg-tcacttttaatttt 31553243  T

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Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 178
Target Start/End: Complemental strand, 33655354 - 33655216
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt-----ttaa 139  Q
    |||| |||||||||||| ||| ||||||||||||||| |||| ||||| | |||||| |||||||||||| |  | || ||| |||| |||      |||    
T  33655354 ttagagtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaattatgggctatataacatgtttttctaaaataa 33655255  T
Q  140 attaagtgtttttgaagtattacatgatcattgatcatg 178  Q
    |||||||||  ||||||||||| ||||||||| ||||||    
T  33655254 attaagtgtgattgaagtattatatgatcatttatcatg 33655216  T

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Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 13771190 - 13771097
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 140  Q
    ||||||||||| ||| ||| |||||||||||||||||||| ||| | | ||||||  ||||||||||||| || || ||| |||| ||||||||    
T  13771190 agggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacggactatataacatgtttttttaaa 13771097  T

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Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 13770946 - 13771030
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 129  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||  | |||| |  ||||||||||||| ||| | ||||||    
T  13770946 ttagggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggacactataaaat 13771030  T

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Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 25887188 - 25887236
Alignment:
Q  43 agttagggtgtgtttggatggagagtttaggaggggaagggaggggagg 91  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  25887188 agttagggtgtgtttggattgagggtttatgaggggaagggaggggagg 25887236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 90
Target Start/End: Complemental strand, 47391100 - 47391057
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggag 90  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  47391100 agggtgtgtttggatggagggtttaagaggggaagggaggggag 47391057  T

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Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 4835479 - 4835548
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||| ||| ||| ||||||||| | |||||||||| | ||| |||||| ||||||||||||||    
T  4835479 agggtgtgtttagattgagggtttaggagagaaagggaggggtgtgcttacttttcttttttaaattacg 4835548  T

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Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 278
Target Start/End: Original strand, 17852966 - 17853106
Alignment:
Q  137 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatg 236  Q
    ||||||||||||  |||| |||||| |||||| || |||||| ||||| || |  |||||||||| | ||| ||| ||    ||| ||||||| | || |    
T  17852966 taaattaagtgtgattgaggtattatatgatcgtttatcatgttgttattttatctttttaaaaa-cttttcatagtgctcgtaatttaaaaatgaaaag 17853064  T
Q  237 taagccctcccctcctaaaccctcttcccaaacacaccctta 278  Q
    ||||||||||||||||||||||||   |||||||||||||||    
T  17853065 taagccctcccctcctaaaccctccatccaaacacaccctta 17853106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 40282195 - 40282263
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatt 113  Q
    ||||||| ||||||||| ||| ||||||||||||||||||| |||||| |   |||| |||||||||||    
T  40282195 ttagggtatgtttggattgagggtttaggaggggaagggagaggagggtttgattttcttttttaaatt 40282263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 48015451 - 48015383
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    ||||| ||||||||||||| | |||||||||||||||||  ||| ||| ||||||  ||||||||||||    
T  48015451 agggtttgtttggatggagggattaggaggggaagggagatgagagcttacttttcgtttttaaattac 48015383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 25887436 - 25887366
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaa 118  Q
    ||||||||||||| || || |||||||||||||||||||||||| | | || |||  |||||||||||||||    
T  25887436 agggtgtgtttgg-tgaagggtttaggaggggaagggaggggagagtttacatttcatttttaaattacgaa 25887366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 76 - 178
Target Start/End: Complemental strand, 41497172 - 41497065
Alignment:
Q  76 gggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt-----ttaaattaagtgtttttgaagtattacatgatcat 170  Q
    ||||||||||||||||| | |||||| |||||||||||||| || || ||| |||| |||      ||||||||||||  |||||| |||| ||||||||    
T  41497172 gggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgatcat 41497073  T
Q  171 tgatcatg 178  Q
    | ||||||    
T  41497072 ttatcatg 41497065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 31364070 - 31364128
Alignment:
Q  72 ggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    ||||||||||||||||||| ||| |||||| |||| ||||||||| ||| | |||||||    
T  31364070 ggaggggaagggaggggagagcttacttttcttttctaaattacggacattataaaatg 31364128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 37926064 - 37926002
Alignment:
Q  68 tttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    ||||||| |||||||||||||||| |||| |||| |||| ||||||||| ||| | |||||||    
T  37926064 tttaggaagggaagggaggggaggactcatttttcttttctaaattacggacattataaaatg 37926002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 37621012 - 37620951
Alignment:
Q  53 tgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatta 114  Q
    ||||||||||||| ||||  || ||||||||||||||||| |  ||||| ||||||||||||    
T  37621012 tgtttggatggagggtttgagaagggaagggaggggagggtttgcttttcttttttaaatta 37620951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 41008424 - 41008387
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagg 82  Q
    |||||||||||||||||| || ||||||||||||||||    
T  41008424 ttagggtgtgtttggatgcagggtttaggaggggaagg 41008387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 13425120 - 13425188
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    ||||||||||||||| ||| |||||||||||||||| || ||| || | | ||||  ||||||||||||    
T  13425120 agggtgtgtttggatagagggtttaggaggggaaggaagaggatggtttattttttatttttaaattac 13425188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 17853104 - 17853072
Alignment:
Q  47 agggtgtgtttggatggagagtttaggagggga 79  Q
    ||||||||||||||||||| |||||||||||||    
T  17853104 agggtgtgtttggatggagggtttaggagggga 17853072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 23116470 - 23116418
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcactttt 101  Q
    ||||||||||||  ||| ||||| ||||||||||||||||||| || ||||||    
T  23116470 ggtgtgtttggaccgagggtttacgaggggaagggaggggaggacttactttt 23116418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 39646678 - 39646630
Alignment:
Q  82 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    |||||||| | |||||||||||||||||||||||| ||| | |||||||    
T  39646678 ggaggggatgactcacttttattttttaaattacggacattataaaatg 39646630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 82 - 279
Target Start/End: Original strand, 8182 - 8390
Alignment:
Q  82 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaa-----attaagtgtttttgaagtattacatgatcattgatca 176  Q
    |||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||     ||||| |||||||||||||||| ||||||||| ||||    
T  8182 ggagaggagagctcacttttattttttaaattacgaacaatgtgaaatgtctttttaagataaattaactgtttttgaagtattatatgatcattaatca 8281  T
Q  177 tgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaag-----ccctcccctcctaaaccctcttccc-aaaca 270  Q
    || ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||     |||||||||||||||| |||||||| |||||    
T  8282 tgttgttaattcaattttttaaaaataattttataacgtctttaaattaaaaaaggaatgtaagccctcccctcccctcctaaactctcttccctaaaca 8381  T
Q  271 cacccttaa 279  Q
    |||||||||    
T  8382 cacccttaa 8390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 2e-59; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 45 - 251
Target Start/End: Complemental strand, 1085736 - 1085524
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 139  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || | ||||||||||||||||||||||||||| ||||||||||| ||||     |||    
T  1085736 ttagggtgtgtttggatagagggtttaggaggggaagggaggagatgactcacttttattttttaaattacgaaccatgtaaaatgtttttttaaaataa 1085637  T
Q  140 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaagg-aatgta 238  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||||| |||||||  ||| |||||||||| || |||    
T  1085636 attaagtgtttttgaagtattatatgatcatttatcatgctgttagttcaattttctaaaaatcattttctaatgtccgtaatttaaaaaaggaaaagta 1085537  T
Q  239 agccctcccctcc 251  Q
    || ||||||||||    
T  1085536 agtcctcccctcc 1085524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 45 - 274
Target Start/End: Original strand, 33643266 - 33643499
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 139  Q
    ||||||||||||| ||| ||  |||||||||||||||||| |||| | |||||||||||||||||||||||||| |||||||||||| ||||     |||    
T  33643266 ttagggtgtgtttagattgaaggtttaggaggggaagggaagggatgactcacttttattttttaaattacgaaaaatgtaaaatgtttttttaaaataa 33643365  T
Q  140 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaa 239  Q
    |||||||||||||||||||||| ||||||||| |||||  | ||||||||||||| |||||||||||||| |||||   ||| ||||||||| ||| |||    
T  33643366 attaagtgtttttgaagtattatatgatcattcatcatattattaattcaattttctaaaaatcattttaaaatgttcataatttaaaaaagaaat-taa 33643464  T
Q  240 gccctcccctcctaaaccctcttcccaaacacacc 274  Q
       |||||||||||||||||||  |||||||||||    
T  33643465 attctcccctcctaaaccctctatccaaacacacc 33643499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 47 - 231
Target Start/End: Original strand, 35927814 - 35928001
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaatt 142  Q
    ||||||||||||||| |||  ||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||   | || |    ||||||    
T  35927814 agggtgtgtttggattgaggttttaggaggggaatggaggggagggctcacatttattttttaaattatgaacaatgtaaatatttttctaaaataaatt 35927913  T
Q  143 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 231  Q
    |||| |||||||||||||| ||||||||| |||||| ||||||||||||||| | ||||| |||||||||  ||| ||| |||||||||    
T  35927914 aagtatttttgaagtattatatgatcatttatcatgttgttaattcaattttct-aaaattattttataaaatctgtaatttaaaaaag 35928001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 50 - 251
Target Start/End: Complemental strand, 40709532 - 40709327
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaa 144  Q
    |||||||||||| |||  ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| || ||||      |||||||    
T  40709532 gtgtgtttggattgaggatttaggaggggaacggaggggaggg-tcacttttattttttaaattatgaacaatgtaaaaggttttttaaaaagaaattaa 40709434  T
Q  145 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccct 244  Q
    ||||||||||||||||| ||||||||| |||||   ||||||| |||||| ||||||| |||||||||| |   ||| ||||||||| || ||||| |||    
T  40709433 gtgtttttgaagtattatatgatcatttatcatatcgttaatttaattttctaaaaattattttataatattcgtaatttaaaaaagaaaagtaagtcct 40709334  T
Q  245 cccctcc 251  Q
    || ||||    
T  40709333 cctctcc 40709327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 75 - 279
Target Start/End: Original strand, 47071079 - 47071288
Alignment:
Q  75 ggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatca 169  Q
    ||||||||||||| |  | ||| ||||||||| |||||||||| ||||||||||||| |||| |||     ||||||||||||||| ||||  |||||||    
T  47071079 ggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaaatattttatgatca 47071178  T
Q  170 ttgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaac 269  Q
    || |||||| |||||||| |||||| |||||||||||||||||||||  ||| ||||||||| || || || | |||| |||||||||||    ||||||    
T  47071179 tttatcatgttgttaattaaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagttagtcttcccttcctaaacccttcatccaaac 47071278  T
Q  270 acacccttaa 279  Q
    ||||||||||    
T  47071279 acacccttaa 47071288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 96 - 250
Target Start/End: Original strand, 25268313 - 25268472
Alignment:
Q  96 acttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaa 190  Q
    |||||||| |||||||||  |||||||||||||||| ||||||||     ||||||||||||||||||||| ||||||||| |||| | |||| ||| ||    
T  25268313 acttttatattttaaattttgaacaatgtaaaatgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttatcacgttgttgattaaa 25268412  T
Q  191 ttttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctc 250  Q
    |||| |||||||||||||||||| ||  ||| |||||||||||| |||| ||||||||||    
T  25268413 ttttctaaaaatcattttataatttccgtaatttaaaaaaggaaagtaaaccctcccctc 25268472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 84 - 231
Target Start/End: Original strand, 2506576 - 2506728
Alignment:
Q  84 aggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcattgatcatg 178  Q
    ||||||||| ||| |||||| ||||||||||||| |||| |||||||| ||||     ||||||||||||||||||||||||| ||||||||| || ||     
T  2506576 aggggagggttcatttttatcttttaaattacgaccaatataaaatgttttttcaaaataaattaagtgtttttgaagtattatatgatcatttattata 2506675  T
Q  179 ctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 231  Q
     ||||||||| ||||||||||||| |||||||||| ||| ||| |||||||||    
T  2506676 ttgttaattcgattttttaaaaattattttataatatctgtaatttaaaaaag 2506728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 77 - 209
Target Start/End: Complemental strand, 51303600 - 51303461
Alignment:
Q  77 ggaagggaggggagggctcactttt-attttttaaattacgaacaatgtaaaatgtcttttt------aaattaagtgtttttgaagtattacatgatca 169  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||||||||||  | |||||      |||||||||||||||||||||||| |||||||    
T  51303600 ggaagggaagggagggctcattttttattttttaaattacgaacaatgtaaaacattttttttaaaataaattaagtgtttttgaagtattatatgatca 51303501  T
Q  170 ttgatcatgctgttaattcaattttttaaaaatcatttta 209  Q
    || |||||| |||||||||||||||  |||||||||||||    
T  51303500 tttatcatgttgttaattcaattttaaaaaaatcatttta 51303461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 45 - 255
Target Start/End: Complemental strand, 525346 - 525133
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------ta 138  Q
    ||||||||||||||||| ||| |||||||| ||||||||| || || | ||||||||| |||||||||||| ||||| ||||||||| ||||      ||    
T  525346 ttagggtgtgtttggattgagggtttaggacgggaagggaaggaagagttcacttttaatttttaaattacaaacaacgtaaaatgttttttttaaaata 525247  T
Q  139 aattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgta 238  Q
    |||||||| | |||||||||||| || |||||| |||||  ||||||||||| ||| ||||||| ||||||| |||||  ||| ||||||||| || |||    
T  525246 aattaagtttgtttgaagtattatataatcatttatcatattgttaattcaa-tttctaaaaattattttat-atgtccgtaatttaaaaaagaaaagta 525149  T
Q  239 agccctcccctcctaaa 255  Q
    |  ||||||||||||||    
T  525148 a-tcctcccctcctaaa 525133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 51303384 - 51303467
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  51303384 agggtgtgtttggattgagggtttaggaggggaggggaggggagggctcacttttattttttatattaccaacaatgtaaaatg 51303467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 90 - 277
Target Start/End: Original strand, 1344592 - 1344783
Alignment:
Q  90 gggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaa 185  Q
    |||||||||||||||||||||||||| ||||||| ||||||| ||||     ||||||||||||||||| ||| || ||| | ||| |||||| ||||      
T  1344592 gggctcacttttattttttaaattacaaacaatgcaaaatgttttttaaaaaaaattaagtgtttttgatgtaatatatgtttatttatcatgttgttgg 1344691  T
Q  186 ttcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaacacaccctt 277  Q
    ||||||||| |||||||||||||| ||||||  ||| ||||||||| ||  |||    |||||||||||||||||   ||||||||| ||||    
T  1344692 ttcaattttctaaaaatcattttacaatgtccgtaatttaaaaaagaaaaataaattttcccctcctaaaccctccatccaaacacatcctt 1344783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 154 - 251
Target Start/End: Original strand, 35512909 - 35513006
Alignment:
Q  154 aagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcc 251  Q
    |||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||  ||| ||||||||  || ||||||||||||||||    
T  35512909 aagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccataatttaaaaaataaaagtaagccctcccctcc 35513006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 35513037 - 35512974
Alignment:
Q  51 tgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatta 114  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  35513037 tgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaatta 35512974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 13387163 - 13386989
Alignment:
Q  55 tttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt-------------aaat 141  Q
    ||||||| ||| ||||||||||| ||| ||| ||||| |||| |||||||||||||||||| ||||||| ||||||| |||||             ||||    
T  13387163 tttggattgagggtttaggagggaaagagagtggaggactcatttttattttttaaattacaaacaatgaaaaatgttttttttttttttataaataaat 13387064  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 216  Q
    |||||||||||   |||||| ||||||||| |||||| ||||||||||||||| |||||||| |||||| |||||    
T  13387063 taagtgttttttgtgtattatatgatcatttatcatgttgttaattcaattttctaaaaatcgttttatgatgtc 13386989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 38509892 - 38509983
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 136  Q
    ||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||||  ||||||||||||| ||| | | |||||||||||    
T  38509892 ttagggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggacactatgaaatgtctttt 38509983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 23536924 - 23536839
Alignment:
Q  55 tttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 140  Q
    ||||||| |||  |||| |||||||||||||||||||||||| ||||||||||||||| | || ||||||||||||| ||||||||    
T  23536924 tttggattgaggatttatgaggggaagggaggggagggctcatttttattttttaaataatgatcaatgtaaaatgtttttttaaa 23536839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 82 - 216
Target Start/End: Complemental strand, 40287467 - 40287325
Alignment:
Q  82 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt--------aaattaagtgtttttgaagtattacatgatcattga 173  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||| | | |||        |||||||||||||||||||||||| || |||||| |    
T  40287467 ggaggggagagctcacttttattttttaaactacgaactatgtaaaatatatatttttttaaataaattaagtgtttttgaagtattatataatcattta 40287368  T
Q  174 tcatgctgttaattcaattttttaaaaatcattttataatgtc 216  Q
    | ||  ||||||||||||||| ||||| |||||| | ||||||    
T  40287367 tgattttgttaattcaattttctaaaactcatttcacaatgtc 40287325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 17622536 - 17622694
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatg------taaaatgtctttttaaa 140  Q
    |||||||||||||||  || ||| |||||||||||  | |||||| ||||||||||||||||||| |||||||||||      |||||     |  ||||    
T  17622536 agggtgtgtttggattaagggttcaggaggggaagcaatgggaggactcacttttattttttaaactacgaacaatgtaattttaaaaaaaaataataaa 17622635  T
Q  141 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaa 199  Q
    ||||||||||| ||||||||| ||||||| | |||||| | ||||||||||||||||||    
T  17622636 ttaagtgttttagaagtattatatgatcacttatcatgttattaattcaattttttaaa 17622694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 216
Target Start/End: Original strand, 20607221 - 20607390
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-------- 136  Q
    |||||||||||||| || ||| ||||||||||||||     |||||||||||||||||||||||||||||   ||||||| |||||| ||||            
T  20607221 ttagggtgtgtttgaattgagggtttaggaggggaa-----gggagggctcacttttattttttaaatta--tacaatgt-aaatgttttttttttttaa 20607312  T
Q  137 -taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 216  Q
     ||||||||||||||||||||||||| ||||| ||  ||||   |||||||| ||||||  ||||||||||||||||||||    
T  20607313 ataaattaagtgtttttgaagtattatatgataatatatca---tgttaatttaattttcaaaaaatcattttataatgtc 20607390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 40094931 - 40095002
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| | ||||||  |||||||||||||    
T  40094931 ttagggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacg 40095002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 12234010 - 12234079
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||| ||| ||||||||||||||||||||| |||||| | |||| ||||||||||||||    
T  12234010 agggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacg 12234079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 168
Target Start/End: Original strand, 30010330 - 30010458
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt-----ttaa 139  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||  | |||||| || ||||||||||| || || ||| |||| |||      |||    
T  30010330 ttagggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacggactatataacatgtttttctaaaataa 30010429  T
Q  140 attaagtgtttttgaagtattacatgatc 168  Q
    |||||||||  ||||||||||| ||||||    
T  30010430 attaagtgtggttgaagtattatatgatc 30010458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 41498651 - 41498579
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggagggg-aagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||  | ||||||  |||||||||||||    
T  41498651 ttagggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacg 41498579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 12234252 - 12234185
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||| |||||||||||||||||||||||||| | | ||||  |||||||||||||    
T  12234252 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacg 12234185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 32951564 - 32951493
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||| | | ||||||  |||||||||||||    
T  32951564 ttagggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacg 32951493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 2859169 - 2859107
Alignment:
Q  54 gtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||| ||  |||||||||||||||||||||||||| | |||||||||||||||||||||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacg 2859107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 115
Target Start/End: Original strand, 2858931 - 2859000
Alignment:
Q  46 tagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||| | ||||||  ||| ||||||||    
T  2858931 tagggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattac 2859000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 20607461 - 20607416
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggaggg 92  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  20607461 agggtgtgtttggatggagggtttaggaggggaagggaggggaggg 20607416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 30010576 - 30010507
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||| | ||||||  |||| ||||||||    
T  30010576 agggtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacg 30010507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 93 - 201
Target Start/End: Original strand, 52707691 - 52707803
Alignment:
Q  93 ctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaatt 187  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||     ||||||| || |||||||||||||| || |||||| |||||| |||| |||    
T  52707691 ctcacttttattttttaaactacaaacaatgtaaaatgttttttaaaaataaattatgtatttttgaagtattatatcatcatttatcatgttgtt-att 52707789  T
Q  188 caattttttaaaaa 201  Q
     ||||||| |||||    
T  52707790 aaatttttaaaaaa 52707803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 41498404 - 41498476
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaac 119  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||||| | ||||||  ||||||||||| ||||    
T  41498404 agggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaattatgaac 41498476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 55 - 194
Target Start/End: Complemental strand, 50079620 - 50079476
Alignment:
Q  55 tttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtt 149  Q
    ||||||| ||| |||||||||| |||  |||| ||| | ||  ||||||| |||||| |||||||||| |||||||| ||||||||     |||||||||    
T  50079620 tttggattgagtgtttaggaggagaaaagaggagagagttcctttttattatttaaagtacgaacaatataaaatgtttttttaaaataaattaagtgtt 50079521  T
Q  150 tttgaagtattacatgatcattgatcatgctgttaattcaatttt 194  Q
    ||| |||||||| ||||||||| |||||  ||||| || ||||||    
T  50079520 tttaaagtattatatgatcatttatcatattgttagttaaatttt 50079476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 35349708 - 35349637
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||||||||||||  || ||||| |||||||||||||||||||| | ||||||  |||||||||||||    
T  35349708 ttagggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacg 35349637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 1085489 - 1085559
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcactttt-attttttaaattacg 116  Q
    ||||||||||||||||||| |||||||||||| | |||||||||| || ||||||  ||||||||||||||    
T  1085489 agggtgtgtttggatggagggtttaggagggggatggaggggaggacttacttttccttttttaaattacg 1085559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 26324014 - 26324059
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggaggg 92  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  26324014 agggtgtgtttggattgagggtttaggaggggaagggaggggaggg 26324059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 40709290 - 40709363
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaa 118  Q
    |||||||||||||||||  |  ||||| ||||||||||||| ||||| || |||||| ||||||||||||||||    
T  40709290 ttagggtgtgtttggatttaaggtttaagaggggaagggagaggaggacttacttttcttttttaaattacgaa 40709363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 2470728 - 2470820
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt 137  Q
    ||||||||||||||||||||| ||||||||||||||| ||  |||||| |   |||   ||||||||||||||||| | |||||||| |||||    
T  2470728 ttagggtgtgtttggatggagggtttaggaggggaagagaatggagggtttcgtttacatttttaaattacgaacactataaaatgttttttt 2470820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 35512638 - 35512694
Alignment:
Q  51 tgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaa 111  Q
    ||||||||||||||| |||||||||||||     |||||||||||||||||||||||||||    
T  35512638 tgtgtttggatggagggtttaggagggga----gggggagggctcacttttattttttaaa 35512694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 2506781 - 2506715
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    |||||||||||||||||||||||| || |||||||||| || | || | |||| |||||||||||||    
T  2506781 ggtgtgtttggatggagagtttagaagaggaagggaggagatgacttagttttcttttttaaattac 2506715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 38510135 - 38510069
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||  || |||||||||||||||||||||||||| | | |||| ||||||||| ||||    
T  38510135 gtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacg 38510069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 8530039 - 8529974
Alignment:
Q  51 tgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||||||| ||||||||||||||||||||||| ||  | | ||||||  |||||||||||||    
T  8530039 tgtgtttggatgaagagtttaggaggggaagggaggtgaaagtttacttttcatttttaaattacg 8529974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 20576131 - 20576176
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggag 90  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||    
T  20576131 ttagagtgtgtttggatagagggtttaggaggggaagggaggggag 20576176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 25268500 - 25268439
Alignment:
Q  55 tttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||| |||||| |||||||| |||||||||| | |||||  ||||||||||||||    
T  25268500 tttggatggagggtttagaaggggaagtgaggggagggtttactttccttttttaaattacg 25268439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 7444476 - 7444547
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||| ||||||| |||| ||| |||| ||||| ||||||| ||||||| | |||||| ||||||||||||||    
T  7444476 ttagagtgtgttaggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattacg 7444547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 28770967 - 28770897
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    ||||||||||||||||||||  ||||||||||| || |||| |||||| | | ||||  ||||||||||||    
T  28770967 ttagggtgtgtttggatggaaggtttaggagggaaaaggagtggagggtttattttttatttttaaattac 28770897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 35349466 - 35349533
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||||| ||||| |||||||  || |||||||| | ||||||  |||||||||||||    
T  35349466 agggtgtgtttggatggagggtttaagagggga--gggggggagggtttacttttcatttttaaattacg 35349533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 26941079 - 26941042
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagg 82  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  26941079 ttagggtgtgtttggattgagggtttaggaggggaagg 26941042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 51597672 - 51597793
Alignment:
Q  51 tgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaag 145  Q
    ||||||||||| ||| ||||| ||  |||||||||||||| | | |||||| |||||||||| ||| || || ||| |||| ||||||||     |||||    
T  51597672 tgtgtttggattgagggtttatgaaaggaagggaggggagagtttacttttcttttttaaatcacggactatataacatgtttttttaaaataaattaag 51597771  T
Q  146 tgtttttgaagtattacatgat 167  Q
    |||  ||||||||||| |||||    
T  51597772 tgtgattgaagtattatatgat 51597793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 7444736 - 7444656
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    ||||||||||||| ||||||||| | |||||| |||||||||| | | ||||  |||| |||||||| ||| | |||||||    
T  7444736 gtgtgtttggatgaagagtttagaaagggaagagaggggagggtttagttttcattttaaaattacggacactataaaatg 7444656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 44211054 - 44210994
Alignment:
Q  137 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaatttttta 197  Q
    ||||||||||||  ||||||||||| |||||| || |||||| ||||| || |||||||||    
T  44211054 taaattaagtgtgattgaagtattatatgatcgtttatcatgttgttattttaatttttta 44210994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 115
Target Start/End: Original strand, 49832567 - 49832615
Alignment:
Q  67 gtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    ||||||||||||||| ||| |||| ||| |||||| |||||||||||||    
T  49832567 gtttaggaggggaagtgagaggagagcttacttttcttttttaaattac 49832615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 3e-55; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 45 - 216
Target Start/End: Original strand, 15353362 - 15353537
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt-aaat-- 141  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||      
T  15353362 ttagggtgtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatgtttttttgaaataa 15353461  T
Q  142 -taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 216  Q
     ||||||||||||| |||||| ||||||||| || ||| ||||||||||||||| |||||||||||||||||||||    
T  15353462 ataagtgtttttgatgtattatatgatcatttataatgttgttaattcaattttctaaaaatcattttataatgtc 15353537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 45 - 216
Target Start/End: Original strand, 15323223 - 15323399
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taa 139  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| | ||||     |||    
T  15323223 ttagggtgtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatatatttttaaaataa 15323322  T
Q  140 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 216  Q
    ||||||||||| ||| |||||| |||||||||  ||||| ||||||||||||||| |||||||||||||||||||||    
T  15323323 attaagtgtttctgatgtattatatgatcatttgtcatgttgttaattcaattttctaaaaatcattttataatgtc 15323399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 230
Target Start/End: Complemental strand, 9051776 - 9051590
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 141  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| | ||||     |||||    
T  9051776 agggtgtgtttggattgagggtttaagaggggaagggagggga-tgctcactttta-tttttaaattacgaacaatgtaaaatattttttttaaataaat 9051679  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaa 230  Q
    ||||||||||| |||||  | ||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||  ||| ||||||||    
T  9051678 taagtgtttttaaagtagcatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatatccgtaatttaaaaaa 9051590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 45 - 251
Target Start/End: Original strand, 10293248 - 10293457
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt---ttaaat 141  Q
    ||||||||||||||||| | | ||||||||  | ||  ||||||||||||||||||||||||||||||||||||||||||||||| | |||    |||||    
T  10293248 ttagggtgtgtttggattgtgggtttaggaaagaaaaagaggggagggctcacttttattttttaaattacgaacaatgtaaaatatttttaaaataaat 10293347  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagc 241  Q
    ||    |||||||||||||| ||||| ||| || ||| ||| |||||| |||| |||||||||||||||||| ||| ||| || |||||| || ||||||    
T  10293348 taccgatttttgaagtattatatgattatttatgatgttgtcaattcagttttctaaaaatcattttataatatctgtaatttgaaaaagaaaagtaagc 10293447  T
Q  242 cctcccctcc 251  Q
     |||||||||    
T  10293448 tctcccctcc 10293457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 47 - 161
Target Start/End: Original strand, 23090995 - 23091114
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 141  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||     |||||    
T  23090995 agggtgtgtttggattgaaggtttaggaggggaagggaggggagggctcacttttatcttttaaattacgaacaatctaaaatgtatttttaaactaaat 23091094  T
Q  142 taagtgtttttgaagtatta 161  Q
    ||||||||||||||||||||    
T  23091095 taagtgtttttgaagtatta 23091114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 45 - 249
Target Start/End: Original strand, 31798916 - 31799128
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt------- 137  Q
    ||||||||||||||||| ||| ||||||||||  ||| |||| || | ||| ||||||||||||||||||||| ||||||||||||| |||||           
T  31798916 ttagggtgtgtttggattgagggtttaggaggataagagaggagatgactcgcttttattttttaaattacgagcaatgtaaaatgttttttttttttaa 31799015  T
Q  138 -aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatg 236  Q
     |||  || |||||||||||||||| ||||||||| |||||| |||||||||||||||| |||||| |||||||||| ||  ||| ||||||||| || |    
T  31799016 taaaaaaaatgtttttgaagtattatatgatcatttatcatgttgttaattcaatttttaaaaaattattttataatatccgtaatttaaaaaagaaaag 31799115  T
Q  237 taagccctcccct 249  Q
    ||| | |||||||    
T  31799116 taaactctcccct 31799128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 87 - 212
Target Start/End: Original strand, 26318345 - 26318475
Alignment:
Q  87 ggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgctg 181  Q
    |||||| ||| ||||||||||||||||||||| ||| |||||||| ||||||||     ||||||||||||||||||||| ||||||| | |||||| ||    
T  26318345 ggagggttcatttttattttttaaattacgaaaaatataaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcaattatcatgttg 26318444  T
Q  182 ttaattcaattttttaaaaatcattttataa 212  Q
    ||||||||||||| ||||| |||||||||||    
T  26318445 ttaattcaattttctaaaagtcattttataa 26318475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 216
Target Start/End: Complemental strand, 4097480 - 4097305
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt--------- 137  Q
    |||||||||| |||||||| |||||||||||||     ||||| | |||||||||||||||||||||  |||||||||||||||| |||||             
T  4097480 agggtgtgttaggatggagggtttaggagggga-----ggggatgactcacttttattttttaaattgtgaacaatgtaaaatgttttttttttttaaaa 4097386  T
Q  138 --aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 216  Q
      |||||||||||||| ||||||||  ||||||||| |||||| ||||||||||||||| ||||||  |||||||||||||    
T  4097385 ataaattaagtgttttggaagtattgtatgatcatttatcatgttgttaattcaattttctaaaaaatattttataatgtc 4097305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 45 - 178
Target Start/End: Complemental strand, 4097759 - 4097620
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------ta 138  Q
    |||| |||||||||||| ||| ||||| ||||||||||||||| |||| |||||||| |||||||||||||| ||||| ||| || | ||||      ||    
T  4097759 ttagagtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacggacaatataacattttttttccaaaata 4097660  T
Q  139 aattaagtgtttttgaagtattacatgatcattgatcatg 178  Q
    ||||||||||  ||||||||||| |||||| || ||||||    
T  4097659 aattaagtgtgattgaagtattatatgatcgtttatcatg 4097620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 47 - 114
Target Start/End: Original strand, 30487306 - 30487373
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatta 114  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||  || ||||||||    
T  30487306 agggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcattgttaaatta 30487373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 240
Target Start/End: Original strand, 3841180 - 3841284
Alignment:
Q  137 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaatttttt--aaaaatcattttataatgtctttaaattaaaaaaggaa 234  Q
    ||||||||||||||||||||||||| || |||||| |||||  ||||||||||||||| |  ||||||||||||||||||||  ||| ||||||||| ||    
T  3841180 taaattaagtgtttttgaagtattatatcatcatttatcat-ttgttaattcaattttgtaaaaaaatcattttataatgtccgtaatttaaaaaagaaa 3841278  T
Q  235 tgtaag 240  Q
     |||||    
T  3841279 agtaag 3841284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 15373739 - 15373669
Alignment:
Q  146 tgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 216  Q
    ||||||||| |||||| |||||||||  ||||| ||||||||||||||| |||||||||||||||||||||    
T  15373739 tgtttttgatgtattatatgatcatttgtcatgttgttaattcaattttctaaaaatcattttataatgtc 15373669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 141
Target Start/End: Complemental strand, 10818459 - 10818366
Alignment:
Q  48 gggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaat 141  Q
    |||||||||||||| |||||||||||||||| ||||||||||||| | ||||||  ||||||||||||| ||| | | |||||| |||| ||||    
T  10818459 gggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaat 10818366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 251
Target Start/End: Original strand, 10818229 - 10818425
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaagt 146  Q
    ||||||||||||||| ||| |||||||||||||||||||||||  | | | |||| |||||||||||||| ||||| ||| |||   |||||||     |    
T  10818229 agggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacggacaatataacatg---ttttaaa-----t 10818320  T
Q  147 gtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcc 246  Q
    ||  ||||||||||| ||||||||| |||||| |  ||  | ||| ||||||||| ||||| ||| ||||  ||| ||||||| | || |||| ||||||    
T  10818321 gtgattgaagtattatatgatcatttatcatgttaatatgttaatattttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctcc 10818420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 19278278 - 19278213
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||||||| |||||||||||||||||||||||||||||| | | |||| ||||||||||||||    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacg 19278213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 23091195 - 23091133
Alignment:
Q  55 tttggatggagagtttaggaggggaagggaggggagggctcactttt-attttttaaattacg 116  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggagggcttacttttctttttttaaattacg 23091133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 25468548 - 25468454
Alignment:
Q  137 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 231  Q
    ||||||||||||||||||||||||| || |||||| |||| | |||||| | |||||| | ||||| |||||||||||||  ||| |||||||||    
T  25468548 taaattaagtgtttttgaagtattatataatcatttatcacgttgttaaattaattttcttaaaattattttataatgtccataatttaaaaaag 25468454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 14515473 - 14515542
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| |   |||| ||||||||||||||    
T  14515473 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacg 14515542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 34176711 - 34176606
Alignment:
Q  146 tgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctc 245  Q
    |||||||||| ||||| ||||||||| || ||  ||||||||||||||||||||||||| |||||||| |   ||| ||||||||| || ||||| | ||    
T  34176711 tgtttttgaaatattatatgatcatttattatattgttaattcaattttttaaaaatcaatttataattttcgtaatttaaaaaagaaaagtaagtcttc 34176612  T
Q  246 ccctcc 251  Q
    ||||||    
T  34176611 ccctcc 34176606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 26318546 - 26318482
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatta 114  Q
    |||||||||||||||||||||||||||| ||||||||||| |  | |||||| ||||||||||||    
T  26318546 gtgtgtttggatggagagtttaggagggaaagggaggggaagatttacttttcttttttaaatta 26318482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 34177124 - 34177060
Alignment:
Q  67 gtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgt 131  Q
    ||||||||  ||||||||||  | | |||||||||||||||||||||||||||||||||||||||    
T  34177124 gtttaggaaaggaagggaggaaatgactcacttttattttttaaattacgaacaatgtaaaatgt 34177060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 15373776 - 15373737
Alignment:
Q  92 gctcacttttattttttaaattacgaacaatgtaaaatgt 131  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15373776 gctcacttttattttttaaattacgaacaatgtaaaatgt 15373737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 665841 - 665929
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 136  Q
    |||||||||||||||| || ||||||||||||||| |||||||||| ||| ||||  ||||||||||| ||| | | | |||||||||||    
T  665841 agggtgtgtttggatg-agggtttaggaggggaagtgaggggagggttcatttttcatttttaaattatgaatattatgaaatgtctttt 665929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 9721138 - 9721207
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||| ||  |||||||||||||||||||||||||| | | ||||  |||||||||||||    
T  9721138 agggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacg 9721207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 12811226 - 12811157
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatta 114  Q
    ||||||||||||||||| ||| |||||||| |||||| |||||||||| | |||||| || |||||||||    
T  12811226 ttagggtgtgtttggattgagggtttaggatgggaagagaggggagggattacttttcttctttaaatta 12811157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 14515717 - 14515633
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 129  Q
    ||||||||||||||||||||| |||||||||||||||| | ||||||| | |  |||  ||||||||||| ||||| | ||||||    
T  14515717 ttagggtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaattatgaacactataaaat 14515633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 28477076 - 28477116
Alignment:
Q  138 aaattaagtgtttttgaagtattacatgatcattgatcatg 178  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  28477076 aaattaagtgtttttgaagtattacatgatcatttatcatg 28477116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 29692974 - 29693014
Alignment:
Q  138 aaattaagtgtttttgaagtattacatgatcattgatcatg 178  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  29692974 aaattaagtgtttttgaagtattacatgatcatttatcatg 29693014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 5287514 - 5287471
Alignment:
Q  98 ttttattttttaaattacgaacaatgtaaaatgtctttttaaat 141  Q
    ||||||||||||||||||||||||| |||||||| |||||||||    
T  5287514 ttttattttttaaattacgaacaatataaaatgtttttttaaat 5287471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 9298737 - 9298690
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggaggg 92  Q
    |||||||||||||||||| || | ||||||||||||||||||||||||    
T  9298737 ttagggtgtgtttggatgaaggggttaggaggggaagggaggggaggg 9298690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 9719034 - 9719100
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||||||| ||| |||||||||||||||||||||||||  | | ||||  |||||||||||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacg 9719100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 30487546 - 30487480
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||| ||| ||| ||||||||||||||||||| |||||| | | |||||||||||||| ||||    
T  30487546 gtgtgtttcgattgagggtttaggaggggaagggagtggagggtttagttttattttttaaactacg 30487480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 33236194 - 33236125
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||| ||||||||||||||||| ||| |||| ||||||||| | | ||||||  |||||||||||||    
T  33236194 agggtgtatttggatggagagtttatgagaggaaaggaggggagagattacttttcatttttaaattacg 33236125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 144
Target Start/End: Complemental strand, 9719273 - 9719178
Alignment:
Q  48 gggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaa 144  Q
    |||||||||||||| ||| ||||| ||||||||| |||||| ||| | | |||| ||||||||||| || || || ||| ||| |||||||||||||    
T  9719273 gggtgtgtttggattgagggtttatgaggggaagagaggggtgggtttaattttcttttttaaattccggactatataacatg-ctttttaaattaa 9719178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 10293484 - 10293424
Alignment:
Q  55 tttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    |||||||| || |||||||||| ||||||||||||| ||| |||||| ||||| |||||||    
T  10293484 tttggatgaagggtttaggaggagaagggaggggagagcttacttttctttttcaaattac 10293424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 1300864 - 1300789
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaat 122  Q
    ||||||||||||||||||| |||| | ||  ||| ||||||||||| | ||||||  ||||||||||||| |||||    
T  1300864 agggtgtgtttggatggagggtttggaagatgaatggaggggagggtttacttttcatttttaaattacggacaat 1300789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 3841330 - 3841247
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    |||||||||||||||| || |||||||||||||||  |  ||| | || |||||| |||||||||||||| ||| | |||||||    
T  3841330 agggtgtgtttggatgaagggtttaggaggggaagaaaatggaagacttacttttcttttttaaattacggacattataaaatg 3841247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 5585304 - 5585375
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcac-ttttattttttaaattacgaaca 120  Q
    |||||||||||||||| |||||||||||||||| | || || | | || |||| ||||||||||||||||||    
T  5585304 gtgtgtttggatggagggtttaggaggggaaggaatggaagagtttactttttcttttttaaattacgaaca 5585375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 19278039 - 19278102
Alignment:
Q  52 gtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    |||||||||||||| |||||||||||||||| ||| ||| | | ||||||  ||||||||||||    
T  19278039 gtgtttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattac 19278102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 34176591 - 34176642
Alignment:
Q  67 gtttaggaggggaagggaggggagggctcacttttattttttaaattacgaa 118  Q
    ||||||||||||| ||||||||| | || |||||| ||||||||||||||||    
T  34176591 gtttaggaggggatgggaggggaagacttacttttcttttttaaattacgaa 34176642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 4097235 - 4097317
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 129  Q
    ||||||||||||||| ||| |||||||||||||||| ||  ||| | | ||||||||||||| ||| ||| ||| | ||||||    
T  4097235 agggtgtgtttggattgagggtttaggaggggaaggaagatgagagtttacttttattttttgaatcacggacattataaaat 4097317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 31799173 - 31799131
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggg 87  Q
    |||||||||||||||||| |||||||| ||||| |||||||||    
T  31799173 ttagggtgtgtttggatgaagagtttaagagggaaagggaggg 31799131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 31849108 - 31849174
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaa 111  Q
    |||| ||||||| |||| ||| ||||| |||||||||||||||||||| | | |||| |||||||||    
T  31849108 ttagagtgtgttaggattgagggtttaagaggggaagggaggggagggtttagttttcttttttaaa 31849174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 31849319 - 31849265
Alignment:
Q  82 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 136  Q
    ||||||||||| ||||||||  ||||||||||||| ||| | |||||||||||||    
T  31849319 ggaggggagggttcacttttcatttttaaattacggacactataaaatgtctttt 31849265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 16738239 - 16738172
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    ||||| ||||||||| ||| |||||||| ||||||| ||||||| | | |||||| |||||||||||||    
T  16738239 agggtttgtttggattgagggtttaggatgggaagg-aggggagagtttacttttcttttttaaattac 16738172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 21606854 - 21606886
Alignment:
Q  47 agggtgtgtttggatggagagtttaggagggga 79  Q
    ||||||||||||||||||| |||||||||||||    
T  21606854 agggtgtgtttggatggagggtttaggagggga 21606886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 33041694 - 33041662
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaag 81  Q
    |||||||||||||||| ||||||||||||||||    
T  33041694 ggtgtgtttggatggaaagtttaggaggggaag 33041662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 3e-52; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 47 - 230
Target Start/End: Original strand, 31061359 - 31061547
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 141  Q
    ||||||||||||||| ||  |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||     |||||    
T  31061359 agggtgtgtttggattgaaggtttaggaggggaaaggatgggagggctcacttttattttttaaattacgaacaatgtaaaatgtgtttttaaaataaat 31061458  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaa 230  Q
    |||||||||||||| ||||| ||||||||| |||||| |||||||||||||||  |||| ||| |||||||||||| ||| ||||||||    
T  31061459 taagtgtttttgaaatattatatgatcatttatcatgttgttaattcaattttcaaaaagtcactttataatgtctgtaatttaaaaaa 31061547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 47 - 231
Target Start/End: Original strand, 45257307 - 45257496
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 141  Q
    ||||||||||||||| |||||||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||||||| || |     |||||    
T  45257307 agggtgtgtttggattgagagtttaggaggggaaaggaagggaggactcacttttattttataaattacgaacaatgtaaaatgttttcttaaaataaat 45257406  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 231  Q
    |||||||||||||||||||| ||||||||| |||||  |||||||||||||||  ||||||||||||||||| ||  ||| |||||||||    
T  45257407 taagtgtttttgaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcattttataatatccgtaatttaaaaaag 45257496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 42296549 - 42296349
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttta-----a 139  Q
    ||||||||||||||||| ||| | |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| | ||||||     |    
T  42296549 ttagggtgtgtttggattgagggattaggaggggaagggaggagagggttcacttttattttttaaattacgaacgatgtaaaatatttttttaaaatga 42296450  T
Q  140 attaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaa 239  Q
    ||||||||||||| || ||||| ||||||||| || ||| |||||||||| |||| ||||| |||||||||||| ||  ||| ||||||||| || ||||    
T  42296449 attaagtgtttttaaattattatatgatcatttattatgttgttaattcatttttctaaaattcattttataatatccgtaatttaaaaaagaaaagtaa 42296350  T
Q  240 g 240  Q
    |    
T  42296349 g 42296349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 48 - 230
Target Start/End: Complemental strand, 1053000 - 1052811
Alignment:
Q  48 gggtgtgtttggatggagagtttaggag-gggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaa 140  Q
    |||||| ||||||| ||||||||||||| ||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| ||||      ||||    
T  1053000 gggtgtatttggattgagagtttaggagcgggaaaggagaggagagctcacttttattttttaaattacgaacaatgtaaaatgtttttttttaaataaa 1052901  T
Q  141 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaa 230  Q
    |||| |||||||||| ||||| | ||||||| |||||| ||||||||||||||| ||||||| |||||||||| ||  ||| ||||||||    
T  1052900 ttaaatgtttttgaaatattatacgatcatttatcatgttgttaattcaattttctaaaaattattttataatatcgataatttaaaaaa 1052811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 47 - 216
Target Start/End: Original strand, 34187575 - 34187751
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 141  Q
    ||||||||||||||| ||||||||||||| |||||| |||||| || ||||||||| |||||||||||||||||| |||| |||| || |     |||||    
T  34187575 agggtgtgtttggattgagagtttaggagtggaaggaaggggaaggttcacttttaatttttaaattacgaacaacgtaagatgttttattaaaataaat 34187674  T
Q  142 taagtgtttttgaagtat--tacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 216  Q
    ||||||||||||||||||  || || |||||| |||||| ||||||||||||||| |||||||||||||||||||||    
T  34187675 taagtgtttttgaagtattatatataatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtc 34187751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 31928286 - 31928121
Alignment:
Q  54 gtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----------taaatta 143  Q
    |||||||| ||| |||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| ||||          |||||||    
T  31928286 gtttggatcgagggtttaggaggggaagggaagggagggctcacttttaatttttaaattacaaacaatgtaaaatgtttttttttttttaaataaatta 31928187  T
Q  144 agtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcatttta 209  Q
    |||||||||||||||||| ||||||||| |||||| | |||||||||||||  |||||||||||||    
T  31928186 agtgtttttgaagtattatatgatcatttatcatgttattaattcaattttaaaaaaatcatttta 31928121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 33265615 - 33265773
Alignment:
Q  55 tttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt----taaattaagtgttt 150  Q
    ||||||| ||| |||||||||||||||||||| || | |||| |||||||||||||||||||||||||||||||  | ||||    ||||||||||||||    
T  33265615 tttggattgagggtttaggaggggaagggaggcgatgactcatttttattttttaaattacgaacaatgtaaaacattttttaaaataaattaagtgttt 33265714  T
Q  151 ttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcatttta 209  Q
    ||||||||||| ||||||||| |||||  |||||||||||||||  |||||||||||||    
T  33265715 ttgaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcatttta 33265773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 49 - 212
Target Start/End: Complemental strand, 3094595 - 3094427
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaa---- 144  Q
    ||||||||||||| ||| |||||||| || ||||||||||| | ||||||||||||||||||||||| ||| ||||||||||| ||| |||| |||        
T  3094595 ggtgtgtttggattgagggtttaggaaggaaagggaggggaagactcacttttattttttaaattacaaactatgtaaaatgtttttctaaaataaattt 3094496  T
Q  145 -gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataa 212  Q
     ||||||||||||||||| ||||| ||| |||||| ||||||||||||||| ||| |||||||||||||    
T  3094495 cgtgtttttgaagtattatatgattatttatcatgttgttaattcaattttctaagaatcattttataa 3094427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 47 - 213
Target Start/End: Complemental strand, 2381231 - 2381060
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 141  Q
    ||||||| ||||||| | | ||||| ||||| | |||||||||| | |||||||||||||||||||||||||||||||||||||| ||||     |||||    
T  2381231 agggtgtatttggattgtgggtttatgagggaatgggaggggagagttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaat 2381132  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataat 213  Q
    |||||||||||||||||||| || |||||  |||||| ||| ||||||||||| ||||| ||||||||||||    
T  2381131 taagtgtttttgaagtattatatcatcatcaatcatgttgtcaattcaattttctaaaattcattttataat 2381060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 15085911 - 15085770
Alignment:
Q  81 gggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaattaagtgtttttgaagtattacatgatcattgat 174  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||||| | ||||      ||||||||||||||||||||||||| ||||||||| ||    
T  15085911 gggatgggagggctcgcttttattttttaaattacgaacaatataaaatattttttaaaaaataaattaagtgtttttgaagtattatatgatcatttat 15085812  T
Q  175 catgctgttaattcaattttttaaaaatcattttataatgtc 216  Q
    || | ||||||||||||||| |||||||||||||||||||||    
T  15085811 caagttgttaattcaattttctaaaaatcattttataatgtc 15085770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 96 - 228
Target Start/End: Original strand, 45098218 - 45098355
Alignment:
Q  96 acttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaa 190  Q
    |||||||||||||| ||||| || |||||||||||| ||||||||     ||||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  45098218 acttttattttttacattacaaataatgtaaaatgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaa 45098317  T
Q  191 ttttttaaaaatcattttataatgtctttaaattaaaa 228  Q
    ||||| ||||| ||||||||||||||| ||| ||||||    
T  45098318 tttttcaaaaaccattttataatgtctgtaatttaaaa 45098355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 96 - 229
Target Start/End: Original strand, 35325316 - 35325456
Alignment:
Q  96 acttttattttttaaattacgaacaatgtaaaatgtcttttt-------aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattc 188  Q
    ||||||||||||| |||||||||||||||||||| | |||||       ||||||||| |||||||||||||| ||||||||| |||||| | |||||||    
T  35325316 acttttatttttttaattacgaacaatgtaaaatatatttttttaaaataaattaagtatttttgaagtattatatgatcatttatcatgttattaattc 35325415  T
Q  189 aattttttaaaaatcattttataatgtctttaaattaaaaa 229  Q
    |||||||||||||| ||||||||||||| |||| |||||||    
T  35325416 aattttttaaaaattattttataatgtcgttaatttaaaaa 35325456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 1270522 - 1270394
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaa 140  Q
    |||||| |||||||| |||  |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||      ||||    
T  1270522 agggtgcgtttggattgaggatttaggaggacaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttttaaataaa 1270423  T
Q  141 ttaagtgtttttgaagtattacatgatca 169  Q
    ||||||||||||||||| ||| |||||||    
T  1270422 ttaagtgtttttgaagtgttatatgatca 1270394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 45 - 161
Target Start/End: Complemental strand, 17334058 - 17333936
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttatt-ttttaaattacgaacaatgtaaaatgtctttt-----ta 138  Q
    ||||||||| |||| || ||| |||||||||||||||| |||||||| |||||||||||| |||||| |||| ||||||||||||||||||||     ||    
T  17334058 ttagggtgtttttgaattgagggtttaggaggggaaggaaggggaggactcacttttatttttttaagttacaaacaatgtaaaatgtctttttaaaata 17333959  T
Q  139 aattaagtgtttttgaagtatta 161  Q
    |||||||||||||||||||||||    
T  17333958 aattaagtgtttttgaagtatta 17333936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 23748339 - 23748250
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt 136  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||  |||||||| |||| ||| | | |||||||||||    
T  23748339 agggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggacactatgaaatgtctttt 23748250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 143 - 255
Target Start/End: Complemental strand, 36052230 - 36052118
Alignment:
Q  143 aagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagcc 242  Q
    ||||||||||||||||| | ||||||||  || ||| ||||||||||||||| |||||||||||||||||||| | ||| |||||| || || ||||| |    
T  36052230 aagtgtttttgaagtatcatatgatcatgtatgatgttgttaattcaattttctaaaaatcattttataatgtatgtaatttaaaatagaaaagtaagtc 36052131  T
Q  243 ctcccctcctaaa 255  Q
     ||||||||||||    
T  36052130 gtcccctcctaaa 36052118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 35736431 - 35736365
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatt 113  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||  ||||||||||    
T  35736431 agggtgtgtttggatggagggtttaggaggtgaagggaggggagggctcacttttcgtttttaaatt 35736365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 22356250 - 22356179
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  22356250 ttagggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacg 22356179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 42813864 - 42813781
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    |||||||||||||||| || ||||||||||||||| ||||||| |||| | |||| |||||||||||||||||| | |||||||    
T  42813864 agggtgtgtttggatgaagggtttaggaggggaagagaggggatggcttatttttcttttttaaattacgaacattataaaatg 42813781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 8554446 - 8554369
Alignment:
Q  139 aattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 216  Q
    |||| |||||||||||||||||  | ||||||| |||||| |||||||||||||||| |||||| |||||||||||||    
T  8554446 aattgagtgtttttgaagtattgtacgatcatttatcatgatgttaattcaatttttaaaaaattattttataatgtc 8554369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 22356016 - 22356093
Alignment:
Q  98 ttttattttttaaattacgaacaatgtaaaatgtctttttaa-----attaagtgtttttgaagtattacatgatcat 170  Q
    |||||||||||||||||||||||||||||||||| |||||||     |||||||||||||||||||||| || |||||    
T  22356016 ttttattttttaaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattatatcatcat 22356093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 9313079 - 9313188
Alignment:
Q  138 aaattaagtgtttttgaagtattacat----gatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaagga 233  Q
    |||||||||||||||||||||| | ||    ||||||| |||| | |||||||||||||||  ||||||||||||||||||||| ||| ||||||| | |    
T  9313079 aaattaagtgtttttgaagtataatatgatcgatcatttatcaagttgttaattcaattttcgaaaaatcattttataatgtctgtaatttaaaaaggaa 9313178  T
Q  234 atgtaagccc 243  Q
    | ||||||||    
T  9313179 aagtaagccc 9313188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 15224938 - 15224802
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt-----ttaaat 141  Q
    |||||||||||||||  || ||||||||||||||||||||||| || | |||||| ||||||||||||||  | || ||| |||| |||      |||||    
T  15224938 agggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacgggctatataacatgtttttctagaataaat 15224839  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatg 178  Q
    |||||||  ||||||||||| ||||||||| ||||||    
T  15224838 taagtgtgattgaagtattatatgatcatttatcatg 15224802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 21502067 - 21502204
Alignment:
Q  82 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt-------aaattaagtgtttttgaagtattacatgatcattgat 174  Q
    ||||||||||| |||  ||||||||| |||||||||||||| |||||| | |||||       |||||||||||||||||||||||| |||| |||| ||    
T  21502067 ggaggggagggttcagatttattttt-aaattacgaacaatataaaatattttttttaaaaataaattaagtgtttttgaagtattatatgaccatttat 21502165  T
Q  175 catgctgttaattcaattttttaaaaatcattttataat 213  Q
    | || ||||||| ||||||| | ||||| ||||||||||    
T  21502166 cttgttgttaatgcaattttcttaaaattattttataat 21502204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 887355 - 887285
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||| |||||| || |||||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  887355 ttagggtgtgtctggatgaag-gtttaggaggggaagggaggggagcgcttacttttcttttttaaattacg 887285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 112
Target Start/End: Original strand, 35736173 - 35736240
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaat 112  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||| | | |||| ||||||||||    
T  35736173 ttagggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaat 35736240  T

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Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 36347787 - 36347716
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||| ||| |||||||||||||||||| ||||| | | |||||| ||||||||||||||    
T  36347787 ttagggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacg 36347716  T

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Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 42813726 - 42813828
Alignment:
Q  148 tttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctccc 247  Q
    ||||| |||||||| ||||| ||| |||| | ||||||||||||||| ||||||||||||||||||||   ||| ||||||||| ||  |||||| ||||    
T  42813726 tttttaaagtattatatgattatttatcaggttgttaattcaattttctaaaaatcattttataatgttcgtaatttaaaaaagaaaaataagccatccc 42813825  T
Q  248 ctc 250  Q
    |||    
T  42813826 ctc 42813828  T

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Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 8426881 - 8426946
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatta 114  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||| | ||||||| |||||||||||    
T  8426881 ggtgtatttgaatggagagtttaggaggggaagggaagggagggtttacttttaatttttaaatta 8426946  T

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Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 41778773 - 41778902
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 141  Q
    ||||||||||||||| ||| |||||| |||| |||||||||||||| | |||||| |  ||||||||| | ||| | |||||||| ||||     |||||    
T  41778773 agggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttgtactttaaattatggacagtataaaatgtttttttaaaataaat 41778872  T
Q  142 taagtgtttttgaagtattacatgatcatt 171  Q
    |||||||  ||||||||||| |||||||||    
T  41778873 taagtgtgattgaagtattatatgatcatt 41778902  T

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Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 17379844 - 17379891
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggaggg 92  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  17379844 ttagggtgtgtttggattgagggtttaggaggggaagggaggggaggg 17379891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 45257553 - 45257482
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||||||||||||||||  ||||||| ||||||||||| || || | |||||| ||||||||||||||    
T  45257553 ttagggtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattacg 45257482  T

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Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 16713494 - 16713628
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt-----aaatta 143  Q
    ||||||||| ||| ||| ||||| |||||||||||| ||||  | ||| ||||| ||||||||||||| ||||| |||||| | |||||     ||||||    
T  16713494 ggtgtgttttgattgagggtttaagaggggaagggaagggatagttcaattttaatttttaaattacgtacaatataaaatatttttttaaaagaaatta 16713593  T
Q  144 agtgtttttgaagtattacatgatcattgatcatg 178  Q
     ||||||||||||||||| ||  ||||| ||||||    
T  16713594 tgtgtttttgaagtattatatattcatttatcatg 16713628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 160
Target Start/End: Complemental strand, 23739996 - 23739882
Alignment:
Q  51 tgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaag 145  Q
    |||||||| || |||  |||||||||| ||| | | |||||||| || |||||||||||||||||||| || ||||||||| ||||     ||||||||     
T  23739996 tgtgtttgaatcgaggatttaggagggaaagagggaggagggctaacatttattttttaaattacgaaaaaagtaaaatgtttttttaaaataaattaaa 23739897  T
Q  146 tgtttttgaagtatt 160  Q
    |||||||||||||||    
T  23739896 tgtttttgaagtatt 23739882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 31795772 - 31795838
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||||||||||| ||||| |||| |||||||||||||| || ||||||  |||||||||||||    
T  31795772 gtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacg 31795838  T

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Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 9631804 - 9631735
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||||| ||||||||||| |||||||  ||||| | ||||||  |||||||||||||    
T  9631804 agggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacg 9631735  T

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Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 886938 - 887051
Alignment:
Q  67 gtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtatta 161  Q
    |||||||||||||||| | ||||||||| |||||| |||||||||||||  ||||| |||||||  ||||     ||||||| ||||  |||||||||||    
T  886938 gtttaggaggggaaggtaagggagggcttacttttcttttttaaattac--acaatataaaatgcttttttaaaataaattatgtgtgattgaagtatta 887035  T
Q  162 catgatcattgatcat 177  Q
     ||||||||| |||||    
T  887036 tatgatcatttatcat 887051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 2380990 - 2381057
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaa-gggaggggagggctcacttttattttttaaa 111  Q
    ||||| ||||||||||| ||| |||||||||||||| ||||||||||| |||| |||| |||||||||    
T  2380990 ttaggatgtgtttggatagagggtttaggaggggaaggggaggggaggactcatttttcttttttaaa 2381057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 141
Target Start/End: Complemental strand, 14196878 - 14196819
Alignment:
Q  82 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaat 141  Q
    ||||||||||||| |||||| |||||||||||||||||| | |||||||| |||| ||||    
T  14196878 ggaggggagggcttacttttcttttttaaattacgaacactataaaatgttttttaaaat 14196819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 36046443 - 36046377
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||| ||| ||||| ||||||||||||||||| || | |||||| ||||||||||||||    
T  36046443 ggtgtgtttggattgagggtttatgaggggaagggagggga-ggtttacttttgttttttaaattacg 36046377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 9426987 - 9427053
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    ||||||||||||| || ||||||||||||||||||||| ||||| |   |||| |||||||||||||    
T  9426987 ggtgtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttcttttttaaattac 9427053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 33265813 - 33265767
Alignment:
Q  84 aggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    |||||||| ||| |||||||||||||||||| |||||||||||||||    
T  33265813 aggggaggactcgcttttattttttaaattatgaacaatgtaaaatg 33265767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 15224143 - 15224188
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggag 90  Q
    ||||||||  ||||||||||| ||||||||||||||||||||||||    
T  15224143 ttagggtgcctttggatggagggtttaggaggggaagggaggggag 15224188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 36347541 - 36347610
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||||||||||| || |||||||||||||||||| | ||| | ||||||||  |||||| ||||||    
T  36347541 agggtgtgtttggatgaagggtttaggaggggaagggaagagagagttcacttttcatttttatattacg 36347610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 36046205 - 36046273
Alignment:
Q  48 gggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||||||||||||| ||||||||||||||  |||||||| | | | ||||  |||||||||||||    
T  36046205 gggtgtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacg 36046273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 85
Target Start/End: Original strand, 6721675 - 6721710
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggag 85  Q
    ||||||||||||||||||||||||||| ||||||||    
T  6721675 gtgtgtttggatggagagtttaggaggagaagggag 6721710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 8554497 - 8554446
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctca 96  Q
    ||||||||||||||||| || |||||| |||||||| |||||||||| ||||    
T  8554497 ttagggtgtgtttggattgaaagtttaagaggggaatggaggggaggactca 8554446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 16713773 - 16713730
Alignment:
Q  43 agttagggtgtgtttggatggagagtttaggaggggaagggagg 86  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||    
T  16713773 agttagggtgtgtttggatggagggtttaggaaaggaagggagg 16713730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 140
Target Start/End: Complemental strand, 40022615 - 40022524
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 140  Q
    |||||| |||||||||| ||||| |||| ||||||||||||||| | || |||  ||||||||||||  ||| | | |||||| ||||||||    
T  40022615 ggtgtgcttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaatgtttttttaaa 40022524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 17380085 - 17380043
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggagggga 89  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||    
T  17380085 agggtgtgtttggattgagggtttaggaggggaagtgagggga 17380043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 251
Target Start/End: Complemental strand, 31795918 - 31795804
Alignment:
Q  137 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatg 236  Q
    ||||||||||||  ||||||||||| |||||| || |||||| ||||| || | ||||| ||||| | ||| ||| ||||  ||| ||||||| | || |    
T  31795918 taaattaagtgtgattgaagtattatatgatcgtttatcatgttgttattttattttttaaaaaaacttttcatagtgtccgtaatttaaaaacgaaaag 31795819  T
Q  237 taagccctcccctcc 251  Q
    |||| ||||||||||    
T  31795818 taagtcctcccctcc 31795804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 21662457 - 21662324
Alignment:
Q  44 gttagggtgtgtttggatggagagtttaggaggggaagggagg--ggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaat 141  Q
    |||||||| ||||||||||||| |||| |||||||| ||||||  ||||| || |||||| | ||||||| ||   ||| |||||||||| |||| ||||    
T  21662457 gttagggtatgtttggatggagggttttggaggggaggggaggcgggaggccttacttttctcttttaaagtatagacactgtaaaatgttttttaaaat 21662358  T
Q  142 ----taagtgtttttgaagtattacatgatcatt 171  Q
        ||||| |  ||||||||||| |||||||||    
T  21662357 caattaagtttgattgaagtattatatgatcatt 21662324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 14187167 - 14187111
Alignment:
Q  193 ttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccct 249  Q
    |||| |||| ||||||||||||| | ||| ||||||||| || ||||||||||||||    
T  14187167 ttttcaaaaacattttataatgtttataatttaaaaaagaaaagtaagccctcccct 14187111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 22356141 - 22356173
Alignment:
Q  180 tgttaattcaattttttaaaaatcattttataa 212  Q
    ||||||||||||||| |||||||||||||||||    
T  22356141 tgttaattcaattttctaaaaatcattttataa 22356173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 23748101 - 23748137
Alignment:
Q  43 agttagggtgtgtttggatggagagtttaggagggga 79  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  23748101 agttagggtgtgtttggatcgagggtttaggagggga 23748137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 4e-51; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 86 - 275
Target Start/End: Original strand, 40858604 - 40858798
Alignment:
Q  86 gggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaa-----gtgtttttgaagtattacatgatcattgatcatgct 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||     ||||||||||||||||| ||||||||| |||||| |    
T  40858604 gggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaatttagtgtttttgaagtattatatgatcatttatcatgtt 40858703  T
Q  181 gttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaacacaccc 275  Q
    ||||||||||||||  ||| ||||||||||||||||  ||| ||||||||| ||  ||| ||||||||||||||||||||   ||||||||||||    
T  40858704 gttaattcaattttcaaaagatcattttataatgtccgtaatttaaaaaagaaaactaaaccctcccctcctaaaccctccatccaaacacaccc 40858798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 47 - 276
Target Start/End: Original strand, 41414078 - 41414313
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaagt 146  Q
    ||||| ||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||| ||| |    
T  41414078 agggtatgtttagattgagggtttaggagggaaagggaggggagggctcacttttattttttaaattatgaacaaggtaaaatgtttttttaaaataaat 41414177  T
Q  147 -----gtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaatt-aaaaaaggaatgtaag 240  Q
         ||||||||||||||| ||||||||| |||||| |||||| |||||||| |||||||||||||||||||||  | | || ||||||| || ||||     
T  41414178 caagcgtttttgaagtattatatgatcatttatcatgttgttaactcaattttctaaaaatcattttataatgtccctgatttaaaaaaagaaaagtaaa 41414277  T
Q  241 ccctcccctcctaaaccctcttcccaaacacaccct 276  Q
    | |||||||||||||||| |   |||||||||||||    
T  41414278 cactcccctcctaaacccaccatccaaacacaccct 41414313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 82 - 251
Target Start/End: Original strand, 34641027 - 34641199
Alignment:
Q  82 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcattgatca 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  ||||     ||||||||||||||||||||||||| ||||||||| ||||    
T  34641027 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaaggattttttaaaataaattaagtgtttttgaagtattatatgatcatttatca 34641126  T
Q  177 tgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcc 251  Q
    || ||||||||||||||| |  ||||||||||||||||||  ||| ||||||||| || ||||||||||||||||    
T  34641127 tgttgttaattcaattttct--aaatcattttataatgtccgtaatttaaaaaagaaaagtaagccctcccctcc 34641199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 53 - 249
Target Start/End: Complemental strand, 16884209 - 16884010
Alignment:
Q  53 tgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtg 147  Q
    ||||||||| ||| ||||||||| |||||||| |  | | |||||||||||||||||| |||||||||||||||||||||||||     |||||||||||    
T  16884209 tgtttggattgagggtttaggagaggaagggatgataagactcacttttattttttaagttacgaacaatgtaaaatgtctttttaaaataaattaagtg 16884110  T
Q  148 tttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctccc 247  Q
    |||||||||||||| ||||||||| |||||| |||| |||||||||||||||| |  |||||| || | | ||||||||||||| |||||||||||||||    
T  16884109 tttttgaagtattatatgatcatttatcatgttgtt-attcaattttttaaaattttttttat-atatttgtaaattaaaaaagaaatgtaagccctccc 16884012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 82 - 276
Target Start/End: Original strand, 48683647 - 48683848
Alignment:
Q  82 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcattgatc- 175  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||     ||||||||||||||||||| ||||| ||||||||| |||     
T  48683647 ggaggggaggactcacttttatttcttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaaatattatatgatcatttatca 48683746  T
Q  176 atgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag-gaatgtaagccctcccctcctaaaccctcttcccaaacacacc 274  Q
    ||| ||||||||||||||  ||||||||||||||||||||   ||| |||||||||  ||  ||| |||||||||||||||||||||  |||||||||||    
T  48683747 atgttgttaattcaatttcctaaaaatcattttataatgttcgtaatttaaaaaagaaaaaataaaccctcccctcctaaaccctctatccaaacacacc 48683846  T
Q  275 ct 276  Q
    ||    
T  48683847 ct 48683848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 53 - 231
Target Start/End: Complemental strand, 10943852 - 10943669
Alignment:
Q  53 tgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtg 147  Q
    ||||||||| ||| ||||| ||||| ||| |||||||||| ||||||||| |||||||||||||||||||| ||||||| ||||||||     |||||||    
T  10943852 tgtttggattgagggtttatgagggaaagagaggggagggttcacttttaatttttaaattacgaacaatgcaaaatgtttttttaaaataaattaagtg 10943753  T
Q  148 tttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 231  Q
    |||||||||||||| || || ||| || ||| ||||||||||||||| |||||||||||||||||| ||| ||| |||||||||    
T  10943752 tttttgaagtattatataattatttattatgttgttaattcaattttctaaaaatcattttataatatctataatttaaaaaag 10943669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 51 - 231
Target Start/End: Complemental strand, 17474446 - 17474261
Alignment:
Q  51 tgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaag 145  Q
    ||||||||||| ||| ||| |||||||||||||||||||| | | ||||||||||||||||||||||| |||||||||| | ||||     |||||||||    
T  17474446 tgtgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaattacgaataatgtaaaatattttttaaaaataaattaag 17474347  T
Q  146 tgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 231  Q
    ||||||||||||||||  |||| ||| |||||  |||||||||||||||| |||||| |||||||||||||  ||| |||||||||    
T  17474346 tgtttttgaagtattatttgattatttatcatattgttaattcaatttttaaaaaattattttataatgtccgtaatttaaaaaag 17474261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 50 - 228
Target Start/End: Complemental strand, 21090312 - 21090129
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaa 144  Q
    |||||||||||| ||  ||||||||| |||||||||| |||| |||||||||||||||||||||| |||||||||||||| | ||||     ||||||||    
T  21090312 gtgtgtttggattgatggtttaggagaggaagggaggagaggactcacttttattttttaaattatgaacaatgtaaaatatttttttaaaataaattaa 21090213  T
Q  145 gtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaa 228  Q
    ||||||||||||||||| ||||| ||  |||||| |||||||||||||||  ||||||| ||||||||| ||| ||| ||||||    
T  21090212 gtgtttttgaagtattatatgataatatatcatgttgttaattcaattttcaaaaaatcgttttataatatctgtaatttaaaa 21090129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 47 - 209
Target Start/End: Original strand, 44412361 - 44412528
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 141  Q
    |||||||||||| || ||| ||||||||||||||| ||||||||| |||| ||||  |||||||||||||||||||||||||  | ||||     |||||    
T  44412361 agggtgtgtttgaattgagggtttaggaggggaagagaggggaggactcattttttatttttaaattacgaacaatgtaaaacatttttttaaaataaat 44412460  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcatttta 209  Q
    |||||||||||||||||||| ||||| ||| |||||| |||||||||||||||  |||||||||||||    
T  44412461 taagtgtttttgaagtattatatgatgatttatcatgttgttaattcaattttcaaaaaatcatttta 44412528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 77 - 251
Target Start/End: Original strand, 26135827 - 26136006
Alignment:
Q  77 ggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcatt 171  Q
    ||||| || |||||| |||||||||||||||||||||| |||||||||||||||| ||||     ||||||||||||||||||||||||| || || |||    
T  26135827 ggaagagaagggaggactcacttttattttttaaattatgaacaatgtaaaatgttttttaaaaataaattaagtgtttttgaagtattatataattatt 26135926  T
Q  172 gatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcc 251  Q
     |||||  |||||||||||||||  |||||| |||||||||||||  ||| ||||||||| || |||| |||||| ||||    
T  26135927 tatcatattgttaattcaattttcaaaaaattattttataatgtccgtaatttaaaaaagaaaagtaaaccctccactcc 26136006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 47 - 231
Target Start/End: Original strand, 24253721 - 24253911
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggagggg-agggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa----- 140  Q
    ||||||||||||||| ||| ||||||||||| |||||||||| || | ||||||||| ||||||||||| || |||||||||||   ||||||||         
T  24253721 agggtgtgtttggattgagggtttaggagggaaagggagggggagtgttcacttttaatttttaaattatgagcaatgtaaaataattttttaaaataaa 24253820  T
Q  141 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 231  Q
    ||||||||||||||||| ||| || |||||| |||||| ||||||||||| ||| ||||| |||||||||||||||  ||| |||||||||    
T  24253821 ttaagtgtttttgaagtgttatataatcatttatcatgttgttaattcaactttctaaaactcattttataatgtccgtaatttaaaaaag 24253911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 49 - 260
Target Start/End: Original strand, 42772046 - 42772250
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaattaagtgt 148  Q
    ||||||||||||| ||  ||||| ||||||||||||||||||| |||||||||||||||||||||||      |  ||||        ||||||||||||    
T  42772046 ggtgtgtttggattgaaggtttaagaggggaagggaggggaggactcacttttattttttaaattacttttttttgaaaaa-------taaattaagtgt 42772138  T
Q  149 ttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccc 248  Q
    ||||||||||||| ||||||||| |||||| |||||||||||||||  ||||||||||||||||||||  ||| || || ||| || |||| || |||||    
T  42772139 ttttgaagtattatatgatcatttatcatgttgttaattcaattttcaaaaaatcattttataatgtccgtaattttaagaagcaaagtaaaccttcccc 42772238  T
Q  249 tcctaaaccctc 260  Q
    ||||||||||||    
T  42772239 tcctaaaccctc 42772250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 67 - 247
Target Start/End: Complemental strand, 18086210 - 18086019
Alignment:
Q  67 gtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt----------aaattaagtgtttttgaag 156  Q
    ||||| ||||||| ||||||| | |||||||| |||||||||||||||| ||||||||||| ||| |||||          |||||||||||||||||||    
T  18086210 gtttatgaggggatgggagggtaaggctcactattattttttaaattactaacaatgtaaattgttttttttttctcaaataaattaagtgtttttgaag 18086111  T
Q  157 tattacatgatcattg-atcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctccc 247  Q
    ||||  |||||||||  || ||| ||||||||||||||| |||||| ||||||||||||||| ||| ||||||||| || |||||| |||||    
T  18086110 tattttatgatcattttattatgttgttaattcaattttctaaaaaacattttataatgtctgtaatttaaaaaagaaaagtaagctctccc 18086019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 88 - 250
Target Start/End: Complemental strand, 8432462 - 8432297
Alignment:
Q  88 gagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatcatgctgt 182  Q
    ||||| ||| ||||| |||||||| ||||||||||| ||||||| ||||||||     ||||||||||||||||||||| |  || ||| |||||| |||    
T  8432462 gagggttcaattttaatttttaaactacgaacaatgaaaaatgtttttttaaaatgaattaagtgtttttgaagtattataaaattatttatcatgttgt 8432363  T
Q  183 taattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctc 250  Q
    |||||||||||| |||||||||||||||||||||| ||| | ||||||  || ||||| |||||||||    
T  8432362 taattcaattttgtaaaaatcattttataatgtctgtaattaaaaaaa--aaagtaagtcctcccctc 8432297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 46978462 - 46978594
Alignment:
Q  82 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa-----ttaagtgtttttgaagtattacatgatcattgatca 176  Q
    ||||||||||| ||||||||| ||||||||||||||||  |||||||||| ||||||||     |||| |||||||||||||||| || |||||| ||||    
T  46978462 ggaggggagggttcacttttaatttttaaattacgaacggtgtaaaatgtttttttaaaataaattaaatgtttttgaagtattatataatcatttatca 46978561  T
Q  177 tgctgttaattcaattttttaaaaatcatttta 209  Q
    || |||||||| |||||| ||||||||||||||    
T  46978562 tgttgttaattaaattttataaaaatcatttta 46978594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 82 - 229
Target Start/End: Complemental strand, 42699821 - 42699669
Alignment:
Q  82 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaattaagtgtttttgaagtattacatgatcattgatca 176  Q
    |||||||||| |||||||||  ||||||||||||||||||| |||||| | |||      ||||||||||||||||||||||||| ||||||||| ||||    
T  42699821 ggaggggaggactcactttttgtttttaaattacgaacaatataaaatatttttaaaaaataaattaagtgtttttgaagtattatatgatcatttatca 42699722  T
Q  177 tgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaa 229  Q
    |  || |||||||||||| ||||| | |||||||||||||  ||| |||||||    
T  42699721 tattgataattcaattttctaaaatttattttataatgtccataatttaaaaa 42699669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 34641234 - 34641151
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||| ||| | |||||||    
T  34641234 agggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacggacattataaaatg 34641151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 49 - 130
Target Start/End: Complemental strand, 44412603 - 44412522
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    ||||||||||||| ||  ||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44412603 ggtgtgtttggattgatggtttgtgaggggaagggaggggaggactcacttttattttttaaattacgaacaatgtaaaatg 44412522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 201
Target Start/End: Complemental strand, 27197893 - 27197734
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 141  Q
    |||||||||||| || ||  ||||| ||| ||||| ||  ||||| |||||||||||||||||||||||||||||||||| || | ||||     |||||    
T  27197893 agggtgtgtttgaattgaaggtttaagagaggaagagaaaggaggactcacttttattttttaaattacgaacaatgtaacatatttttttaaaataaat 27197794  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaa 201  Q
    ||||| | ||| |||||||| ||||||||  |||||| ||||||||||||||| ||||||    
T  27197793 taagtatatttaaagtattatatgatcatctatcatgttgttaattcaattttctaaaaa 27197734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 24253968 - 24253883
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    ||||||||||||||||||||| |||||| |||||||||||||| |||  | |||||| |||||||||||||| ||| | |||||||    
T  24253968 ttagggtgtgtttggatggagggtttagaaggggaagggagggaaggatttacttttcttttttaaattacggacattataaaatg 24253883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 220643 - 220548
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 140  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||||   | |||||| |||||||||||||| || |||||| |||| ||| ||||    
T  220643 ttagggtctgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacggactatgtaacatgtttttctaaa 220548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 28582755 - 28582684
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||  |||  ||||||||||||||||||||||||| | |||||| ||||||||||||||    
T  28582755 ttagggtgtgtttggactgaggatttaggaggggaagggaggggagggtttacttttcttttttaaattacg 28582684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 24560217 - 24560310
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 140  Q
    |||||||||||||||  || |||||||||||||||||||||||||| |   |||| |||||||||||||| || |||||| |||| ||| ||||    
T  24560217 agggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactatgtaacatgtttttctaaa 24560310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 36727242 - 36727349
Alignment:
Q  112 ttacgaacaatgtaaaatgt-ctttttaaat---taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattt 207  Q
    |||| ||||||||||||||| ||||| ||||   |||||||||||||||||||| ||||| ||| |||||| |||||| | |||||| | ||||| ||||    
T  36727242 ttactaacaatgtaaaatgttcttttaaaataaataagtgtttttgaagtattatatgataatttatcatgttgttaagttaattttcttaaaattattt 36727341  T
Q  208 tataatgt 215  Q
    ||||||||    
T  36727342 tataatgt 36727349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 26136039 - 26135959
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaat 129  Q
    |||||| ||| |||||| ||||||||||||||||||| |||||| | |||||| |||||||||||||| ||| | ||||||    
T  26136039 ggtgtgattgaatggagggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggacattataaaat 26135959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 25654969 - 25655043
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaaca 120  Q
    ||||||||| ||| |||||||| ||||||||||||||||||||||||| | ||||||  |||||| ||||||||||    
T  25654969 ttagggtgtatttagatggaga-tttaggaggggaagggaggggagggtttacttttcatttttatattacgaaca 25655043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 5962014 - 5961933
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaa 127  Q
    |||||||||||||| || ||| ||||||||||| |||||||| || | ||||||||| ||||| ||||||| |||||||||||    
T  5962014 ttagggtgtgtttgtattgagggtttaggaggg-aagggaggtgaagactcacttttgtttttaaaattacaaacaatgtaaa 5961933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 24560463 - 24560393
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    ||||||||||||||||||||| |||||||||||||| ||| ||||| | | ||||||  ||||||||||||    
T  24560463 ttagggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattac 24560393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 283
Target Start/End: Complemental strand, 54985812 - 54985696
Alignment:
Q  167 tcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttccca 266  Q
    ||||| |||||  ||||||||||||||| ||||||||| |||||||||||  ||| ||||||| | ||  ||||| ||| ||| ||||||||||   |||    
T  54985812 tcatttatcatattgttaattcaattttctaaaaatcaatttataatgtccgtaatttaaaaacgaaaactaagctctctccttctaaaccctcaatcca 54985713  T
Q  267 aacacacccttaataaa 283  Q
    ||||||| |||| ||||    
T  54985712 aacacactcttagtaaa 54985696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 25499141 - 25499074
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaat 112  Q
    |||||| |||||||||||||||||||| |||||| || ||||| |||| | |||||| ||||||||||    
T  25499141 ttagggggtgtttggatggagagtttaagagggggagagagggaagggtttacttttcttttttaaat 25499074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 41110323 - 41110390
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||||||||||||  ||||||||||||||||||| || || | ||||||  |||||||||||||    
T  41110323 ggtgtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacg 41110390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 276
Target Start/End: Complemental strand, 30200339 - 30200098
Alignment:
Q  47 agggtgtgtttggat----ggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt-----tt 137  Q
    |||||||||||||||    |||| || |||||||||||||||||| |||| | |||||| |||||||||||||| || || ||| |||| |||      |    
T  30200339 agggtgtgtttggattgagggagggtataggaggggaagggagggaagggtttacttttcttttttaaattacggactatataacatgtttttctaaaat 30200240  T
Q  138 aaattaagtgtttttgaagtattacatgatcattgatcatgctgttaat---tcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaa 234  Q
    |||| ||||||  || ||||| || |||||| ||| | ||  |||||||   | || |||||||||| ||||| ||| ||||  ||| ||||||| | ||    
T  30200239 aaatcaagtgtgattaaagtactatatgatcgttgtttattatgttaatatgtaaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaa 30200140  T
Q  235 tgtaagccctcccctcctaaaccctcttcccaaacacaccct 276  Q
      ||| ||||||||||||||||||||   |||||||||||||    
T  30200139 actaaaccctcccctcctaaaccctccatccaaacacaccct 30200098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 28581189 - 28581254
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    |||||||||||||||| |||||| || |||||||||||||||| | | ||||  ||||||||||||    
T  28581189 gtgtgtttggatggagggtttagaagaggaagggaggggagggtttagttttcatttttaaattac 28581254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 36568902 - 36568947
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggag 90  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||||    
T  36568902 ttagggtgtgtttggatggagggtttaggagtggaatggaggggag 36568947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 55428492 - 55428553
Alignment:
Q  155 agtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 216  Q
    ||||||| ||||||||| |||| | ||||||||||||||| |||||||||| || |||||||    
T  55428492 agtattatatgatcatttatcacgttgttaattcaattttctaaaaatcatcttgtaatgtc 55428553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 55428619 - 55428554
Alignment:
Q  51 tgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||| ||| ||||||||||||||||||||||| |  | |||||| || |||||||||||    
T  55428619 tgtgtttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacg 55428554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 8432261 - 8432321
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttt 107  Q
    |||||||||||| |||||| ||||| ||||||||| ||||||||| || |||||| |||||    
T  8432261 agggtgtgtttgaatggagggtttacgaggggaagagaggggaggacttactttttttttt 8432321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 280
Target Start/End: Complemental strand, 37102243 - 37102155
Alignment:
Q  192 tttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaacacacccttaat 280  Q
    |||||||||| ||||| ||| ||||  ||| ||||||| | ||  ||| ||||||||||||||||||||   |||||||||||||||||    
T  37102243 tttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaaccctcccctcctaaaccctccatccaaacacacccttaat 37102155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 14897981 - 14898044
Alignment:
Q  52 gtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    |||||||||| ||||||||||||||||||||||| |||    | |||||| |||||||||||||    
T  14897981 gtgtttggattgagagtttaggaggggaagggagaggaaattttacttttcttttttaaattac 14898044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 18654598 - 18654645
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggaggg 92  Q
    ||||||||||||||||||||| ||||||||||| ||| || |||||||    
T  18654598 ttagggtgtgtttggatggagggtttaggagggaaagagatgggaggg 18654645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 23028168 - 23028101
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||| |||| |||||||||  ||||| ||| || ||||||  |||||||||||||    
T  23028168 ggtgtgtttggatggagggtttgggaggggaaaagagggcaggacttactttttatttttaaattacg 23028101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 52474157 - 52474090
Alignment:
Q  49 ggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||||||| |  | ||||||||||||||||||| |||||| | ||||||  |||||||||||||    
T  52474157 ggtgtgtttggaggatgggtttaggaggggaagggagaggagggtttactttttatttttaaattacg 52474090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 85
Target Start/End: Original strand, 10748299 - 10748333
Alignment:
Q  51 tgtgtttggatggagagtttaggaggggaagggag 85  Q
    ||||||||||||||| |||||||||||||||||||    
T  10748299 tgtgtttggatggagggtttaggaggggaagggag 10748333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 30200096 - 30200130
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggagggga 79  Q
    ||||||||||||||||||||| |||||||||||||    
T  30200096 ttagggtgtgtttggatggagggtttaggagggga 30200130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 14897892 - 14897933
Alignment:
Q  44 gttagggtgtgtttggatggagagtttaggaggggaagggag 85  Q
    |||| ||||| ||||||| |||||||||||||||||||||||    
T  14897892 gttaaggtgtttttggattgagagtttaggaggggaagggag 14897933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 27541937 - 27541998
Alignment:
Q  53 tgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatta 114  Q
    ||||||||| ||| |||||||||||||||||||| || || |||| |||  |||||||||||    
T  27541937 tgtttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaatta 27541998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 37102385 - 37102348
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagg 82  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  37102385 ttagggtgtgtttggattgagggtttaggaggggaagg 37102348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 41110565 - 41110496
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||| ||| ||||  ||||||||||||| ||| || | ||||||  |||||||||||||    
T  41110565 agggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacg 41110496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 42772268 - 42772231
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagg 82  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  42772268 ttagggtgtgtttgaatggagggtttaggaggggaagg 42772231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 18654842 - 18654802
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggag 90  Q
    ||||||||| || ||| ||||||||||||||||||||||||    
T  18654842 gtgtgtttgaattgagggtttaggaggggaagggaggggag 18654802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 37102159 - 37102191
Alignment:
Q  47 agggtgtgtttggatggagagtttaggagggga 79  Q
    ||||||||||||||||||| |||||||||||||    
T  37102159 agggtgtgtttggatggagggtttaggagggga 37102191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 41039948 - 41039984
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaag 81  Q
    ||||||||||||||||||||  |||||||||||||||    
T  41039948 ttagggtgtgtttggatggaaggtttaggaggggaag 41039984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 52473920 - 52473984
Alignment:
Q  52 gtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacg 116  Q
    |||||||||| |||||||| ||||||||||  | ||||| | ||| |||| ||||||||||||||    
T  52473920 gtgtttggattgagagtttgggaggggaagaaatgggagagttcaattttcttttttaaattacg 52473984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 47 - 216
Target Start/End: Complemental strand, 1642 - 1467
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttt------ttaaa 140  Q
    |||||||||||| || ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||       ||||    
T  1642 agggtgtgtttgaattgagggtttaggagaggaatggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttctttaaataaa 1543  T
Q  141 ttaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtc 216  Q
    |||||| ||||| |||||||| ||||||||| |||| | ||||||||||||||| ||||||||||| |||||||||    
T  1542 ttaagtattttttaagtattatatgatcatttatcaagttgttaattcaattttctaaaaatcattctataatgtc 1467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 1175 - 1256
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgt 131  Q
    |||||||||||| ||| ||||||||||||||| |||||||| | | |||||| |||||||||||||| || |||||| ||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacggactatgtaacatgt 1256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 86; Significance: 6e-41; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 47 - 231
Target Start/End: Original strand, 37383 - 37572
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt-----taaat 141  Q
    |||||| ||||| || |||  |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||     |||||    
T  37383 agggtgcgtttgaattgaggatttaggagggcaaggaaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaat 37482  T
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 231  Q
     ||||||||||||||| ||| ||||||| | |||||| |||||||| | |||| |||||||||| ||||| ||||| ||| |||||||||    
T  37483 caagtgtttttgaagtgttatatgatcacttatcatgttgttaattaagttttctaaaaatcatcttatattgtctgtaatttaaaaaag 37572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 47 - 169
Target Start/End: Original strand, 30715 - 30843
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttt------taaa 140  Q
    |||||| |||||||| |||  |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||      ||||    
T  30715 agggtgcgtttggattgaggatttaggaggacaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttttaaataaa 30814  T
Q  141 ttaagtgtttttgaagtattacatgatca 169  Q
    ||||||||||||||||| ||| |||||||    
T  30815 ttaagtgtttttgaagtgttatatgatca 30843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 93 - 281
Target Start/End: Original strand, 52932 - 53122
Alignment:
Q  93 ctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaat----taagtgtttttgaagtattacatgatcattgatcatgctgttaattc 188  Q
    ||||||||||||||||||||||| ||||||||||||| | |||||||||    |||||||||||||| ||||| ||||||||| |||||| ||||| |||    
T  52932 ctcacttttattttttaaattacaaacaatgtaaaatatttttttaaatacattaagtgtttttgaaatattatatgatcatttatcatgttgttagttc 53031  T
Q  189 aattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcctaaaccctcttcccaaacacacccttaata 281  Q
    ||||||  ||||||||||| |||||| |  ||| ||||||||| || |||  |  |  ||||||||||||||   ||||||||||||||||||    
T  53032 aattttcaaaaaatcatttcataatgcccataatttaaaaaagaaaagta--cattgtcctcctaaaccctccatccaaacacacccttaata 53122  T

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Target: scaffold0007 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 137 - 251
Target Start/End: Original strand, 242311 - 242425
Alignment:
Q  137 taaattaagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatg 236  Q
    ||||| |||| |||||||| ||||| || |||||| ||||||  ||||||||||||||||||||||||||||||||||||  ||| ||||||||| || |    
T  242311 taaatgaagtatttttgaattattatatcatcatttatcatgtcgttaattcaattttttaaaaatcattttataatgtccgtaatttaaaaaagaaaag 242410  T
Q  237 taagccctcccctcc 251  Q
    ||| |||||||||||    
T  242411 taaaccctcccctcc 242425  T

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Target: scaffold0007; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 242461 - 242377
Alignment:
Q  46 tagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatg 130  Q
    |||| ||||||||||||||  |||||  ||||||||||||||||||| | |||||| |||||||||||||| ||| | |||||||    
T  242461 taggctgtgtttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatg 242377  T

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Target: scaffold0012 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 82 - 231
Target Start/End: Original strand, 184636 - 184796
Alignment:
Q  82 ggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtcttttt----------aaattaagtgtttt-tgaagtattacatgatcat 170  Q
    ||||||||||| ||||||||||||||||||||| |||| || |||||||| |||||          |||||||||||||| |||||||||| ||||| ||    
T  184636 ggaggggagggttcacttttattttttaaattatgaactatataaaatgtttttttttttttaaataaattaagtgttttttgaagtattatatgataat 184735  T
Q  171 tgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 231  Q
      |||||| |||||||||||||||  ||||||||||||||||||||  ||| |||||||||    
T  184736 atatcatgttgttaattcaattttaaaaaaatcattttataatgtccataatttaaaaaag 184796  T

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Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 184847 - 184784
Alignment:
Q  51 tgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaatta 114  Q
    ||||||||||||||| ||||||||||| |||||| ||||||| | ||| || ||||||||||||    
T  184847 tgtgtttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaatta 184784  T

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Target: scaffold1414 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1414
Description:

Target: scaffold1414; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 355 - 473
Alignment:
Q  102 attttttaaattacgaacaatgtaaaatgtctttttaa------attaagtgtttttgaagtattacatgatcattgatcatgctgttaa-ttcaatttt 194  Q
    |||||||| ||||||||||| ||||||||| ||||| |      |||||||||||||||||||||  || |||||| ||||||||||||| || ||||||    
T  355 attttttatattacgaacaacgtaaaatgttttttttataaataattaagtgtttttgaagtattttattatcatttatcatgctgttaattttaatttt 454  T
Q  195 ttaaaaatcattttataat 213  Q
     ||||||||||||||||||    
T  455 ctaaaaatcattttataat 473  T

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Target: scaffold0198 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 3150 - 3215
Alignment:
Q  50 gtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    |||||||||||| |||||||||||||||||||||||||||| | | |||||| |||||||||||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattac 3215  T

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Target: scaffold0067 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 39434 - 39341
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaa 140  Q
    ||||||||||||||| ||| |||||| |||| |||||||||||||| | |||||| |||||||||||||| || |||||| |||| ||| ||||    
T  39434 agggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacggactatgtaacatgtttttctaaa 39341  T

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Target: scaffold0067; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 39184 - 39256
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaaggga-ggggagggctcacttttattttttaaattacg 116  Q
    ||||||||||||||||||||| ||||||||||||||  || |||||||| | ||||||  |||||||||||||    
T  39184 ttagggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacg 39256  T

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Target: scaffold0240 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 17640 - 17729
Alignment:
Q  142 taagtgtttttgaagtattacatgatcattgatcatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaag 231  Q
    ||||||| |||||||||||| ||||| ||| |||||| || ||||||||||||  ||||||||||||||||| | | ||| |||||||||    
T  17640 taagtgtatttgaagtattatatgattatttatcatgttgctaattcaattttcaaaaaatcattttataatatttgtaatttaaaaaag 17729  T

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Target: scaffold0240; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 17782 - 17716
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    ||||||||||||||||||| ||||||||| |||||||||||  ||| | |||||| |||||||||||||    
T  17782 agggtgtgtttggatggagggtttaggagtggaagggaggg--gggtttacttttcttttttaaattac 17716  T

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Target: scaffold0096 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 6582 - 6652
Alignment:
Q  45 ttagggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattac 115  Q
    ||||||||||||||||| ||   ||||||||| ||||||||||||||| | |||||| |||||||||||||    
T  6582 ttagggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattac 6652  T

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Target: scaffold0262 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 16296 - 16369
Alignment:
Q  47 agggtgtgtttggatggagagtttaggaggggaagggaggggagggctcacttttattttttaaattacgaaca 120  Q
    ||||| ||||||||||||| ||||||||||| || ||||||||||| | ||||||  ||||||||||| |||||    
T  16296 agggtttgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaattatgaaca 16369  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 81546 - 81498
Alignment:
Q  151 ttgaagtattacatgatcattgatcatgctgttaattcaattttttaaa 199  Q
    ||||||||||| ||||||||| |||||| | ||| ||||||||||||||    
T  81546 ttgaagtattatatgatcatttatcatgttattatttcaattttttaaa 81498  T

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