View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7708A_low_182 (Length: 246)
Name: NF7708A_low_182
Description: NF7708A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7708A_low_182 |
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Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 9 - 238
Target Start/End: Original strand, 32103469 - 32103698
Alignment:
| Q |
9 |
gaagaatatatagtgagtgaggaagaggaaaagaaaatgatgacgtacagttgttgtgggcaaagttgccagaagaggctataagtccactgaacagatt |
108 |
Q |
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| T |
32103469 |
gaagaatatatagtgagtgaggaagaggaaaagaaaatgatgacgtacagttgttgtgggcaaagttgccagaagaggctataagtccactgaacagatt |
32103568 |
T |
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| Q |
109 |
gcaccgcagcctgcaacatgttttgaagcttactgcctaagggagatggagccgccattctttattcattcagtcattaccaaacagttttttctttcat |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32103569 |
gcaccgcagcctgcaacatgttttgaagcttactgcctaatggagatggagcagccattctttattcattcagtcattaccaaacagttttttctttcat |
32103668 |
T |
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| Q |
209 |
ttctctgcaatatttaatcatatctaaaac |
238 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
32103669 |
ttctctgcaatatttaatcatatctaaaac |
32103698 |
T |
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