View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7708A_low_190 (Length: 244)

Name: NF7708A_low_190
Description: NF7708A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7708A_low_190
NF7708A_low_190
[»] chr8 (6 HSPs)
chr8 (14-220)||(25218599-25218805)
chr8 (14-220)||(7821817-7822023)
chr8 (14-220)||(30307156-30307362)
chr8 (14-221)||(31978560-31978767)
chr8 (14-183)||(25209103-25209272)
chr8 (14-221)||(21113777-21113984)
[»] chr4 (7 HSPs)
chr4 (14-219)||(49710152-49710357)
chr4 (14-220)||(35855886-35856092)
chr4 (14-220)||(38518075-38518281)
chr4 (14-221)||(1860656-1860863)
chr4 (14-220)||(49786862-49787068)
chr4 (14-161)||(55559131-55559278)
chr4 (120-216)||(13337320-13337416)
[»] chr2 (11 HSPs)
chr2 (14-220)||(21395349-21395555)
chr2 (14-221)||(27192468-27192675)
chr2 (14-221)||(27842282-27842489)
chr2 (14-220)||(27509353-27509559)
chr2 (14-220)||(28666206-28666412)
chr2 (14-220)||(41920207-41920413)
chr2 (14-221)||(24269103-24269310)
chr2 (14-220)||(37825040-37825246)
chr2 (14-220)||(17683863-17684069)
chr2 (22-217)||(24245812-24246007)
chr2 (14-215)||(35609664-35609865)
[»] chr7 (8 HSPs)
chr7 (14-220)||(9001179-9001385)
chr7 (14-220)||(7036699-7036905)
chr7 (14-220)||(12781182-12781389)
chr7 (14-220)||(12786012-12786218)
chr7 (14-220)||(21070096-21070302)
chr7 (14-219)||(5828590-5828795)
chr7 (23-221)||(22843792-22843990)
chr7 (14-161)||(42232063-42232210)
[»] scaffold0073 (2 HSPs)
scaffold0073 (14-221)||(19436-19643)
scaffold0073 (14-220)||(31912-32117)
[»] chr1 (11 HSPs)
chr1 (17-220)||(37390186-37390389)
chr1 (14-220)||(6311028-6311235)
chr1 (14-220)||(16042004-16042210)
chr1 (14-212)||(48238519-48238717)
chr1 (14-221)||(18148667-18148874)
chr1 (14-220)||(2453151-2453357)
chr1 (14-220)||(36207194-36207400)
chr1 (14-220)||(2329148-2329351)
chr1 (14-219)||(48775370-48775575)
chr1 (14-161)||(52500648-52500795)
chr1 (155-218)||(48233498-48233561)
[»] scaffold0002 (1 HSPs)
scaffold0002 (14-220)||(321370-321576)
[»] chr5 (14 HSPs)
chr5 (14-220)||(27881063-27881269)
chr5 (14-225)||(25542822-25543033)
chr5 (14-220)||(8428608-8428814)
chr5 (14-220)||(37372915-37373121)
chr5 (14-220)||(39883162-39883368)
chr5 (14-221)||(14192845-14193052)
chr5 (23-220)||(17871671-17871868)
chr5 (14-161)||(24629954-24630101)
chr5 (19-220)||(3689961-3690162)
chr5 (19-220)||(3876625-3876826)
chr5 (14-161)||(10025042-10025189)
chr5 (14-161)||(30346637-30346784)
chr5 (14-202)||(37261294-37261482)
chr5 (24-57)||(6089199-6089232)
[»] chr3 (13 HSPs)
chr3 (14-220)||(32750-32956)
chr3 (14-221)||(10110579-10110786)
chr3 (14-221)||(52918045-52918252)
chr3 (14-218)||(50410151-50410355)
chr3 (14-221)||(10000386-10000593)
chr3 (14-221)||(10237535-10237741)
chr3 (14-220)||(10968815-10969021)
chr3 (14-220)||(13530018-13530224)
chr3 (16-220)||(11362239-11362444)
chr3 (14-220)||(11368625-11368833)
chr3 (14-209)||(46913050-46913245)
chr3 (18-202)||(10038623-10038807)
chr3 (14-181)||(47692948-47693115)
[»] chr6 (8 HSPs)
chr6 (16-221)||(29640061-29640266)
chr6 (14-220)||(15333622-15333828)
chr6 (16-221)||(31510232-31510437)
chr6 (14-220)||(2202213-2202419)
chr6 (14-216)||(18344104-18344306)
chr6 (14-220)||(10187523-10187729)
chr6 (23-220)||(30881315-30881512)
chr6 (14-169)||(12517367-12517522)
[»] scaffold0550 (1 HSPs)
scaffold0550 (14-220)||(606-812)
[»] scaffold0090 (1 HSPs)
scaffold0090 (14-220)||(48970-49176)
[»] scaffold0262 (1 HSPs)
scaffold0262 (17-225)||(18988-19196)
[»] scaffold0017 (1 HSPs)
scaffold0017 (14-221)||(186534-186740)
[»] scaffold0134 (1 HSPs)
scaffold0134 (14-219)||(5295-5499)
[»] scaffold1139 (1 HSPs)
scaffold1139 (18-220)||(983-1185)
[»] scaffold0356 (1 HSPs)
scaffold0356 (14-220)||(17910-18109)
[»] scaffold0003 (2 HSPs)
scaffold0003 (18-220)||(182794-182996)
scaffold0003 (16-220)||(165511-165716)
[»] scaffold0025 (1 HSPs)
scaffold0025 (14-220)||(16663-16869)
[»] scaffold0118 (1 HSPs)
scaffold0118 (14-161)||(28727-28874)
[»] scaffold0888 (1 HSPs)
scaffold0888 (14-132)||(24-142)
[»] scaffold1424 (1 HSPs)
scaffold1424 (14-87)||(1627-1700)


Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 25218805 - 25218599
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25218805 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 25218706  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25218705 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 25218606  T
Q  214 catcaac 220  Q
    |||||||    
T  25218605 catcaac 25218599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 7821817 - 7822023
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7821817 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctgaaatcagcgacatcataaattcgttaacatgct 7821916  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  7821917 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcggaatacacaaagtctataagtga 7822016  T
Q  214 catcaac 220  Q
    |||||||    
T  7822017 catcaac 7822023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 30307156 - 30307362
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30307156 tggacatcagaattttcacccgatctaaaaatagaatcggagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 30307255  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  30307256 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcgttcagatcgggatacacaaagtctataagtga 30307355  T
Q  214 catcaac 220  Q
    |||||||    
T  30307356 catcaac 30307362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 31978767 - 31978560
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  31978767 tggacatctgaattttcccccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaatttgttgacatgct 31978668  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  31978667 caactgaatcaagcgttgatgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtttataagtga 31978568  T
Q  214 catcaaca 221  Q
    ||||||||    
T  31978567 catcaaca 31978560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 25209272 - 25209103
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25209272 tggacatcagaattttcgcccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 25209173  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcatt 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25209172 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatt 25209103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 21113984 - 21113777
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  21113984 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 21113885  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||| |||  |||| |||||||||||||||||    
T  21113884 caactgaatcaagcgttggtgcaagtattccccttttttggaaaaatagcgggtcaccaaggttatcattcaaatcaagatacacaaagtctataagtga 21113785  T
Q  214 catcaaca 221  Q
    ||||||||    
T  21113784 catcaaca 21113777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 49710152 - 49710357
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49710152 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 49710251  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  49710252 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 49710351  T
Q  214 catcaa 219  Q
    ||||||    
T  49710352 catcaa 49710357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 35855886 - 35856092
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35855886 tggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 35855985  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35855986 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 35856085  T
Q  214 catcaac 220  Q
    |||||||    
T  35856086 catcaac 35856092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 38518075 - 38518281
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38518075 tggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 38518174  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  38518175 caattgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatttagatcgggatacacaaagtctataagtga 38518274  T
Q  214 catcaac 220  Q
    |||||||    
T  38518275 catcaac 38518281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 1860656 - 1860863
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||    
T  1860656 tggacatcagaattttcacccgatcaacaaacagaatcagagcttaaatactctttctcttcacccagaatcagtgacatcatatattcgttaacatgct 1860755  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  1860756 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtga 1860855  T
Q  214 catcaaca 221  Q
    ||||||||    
T  1860856 catcaaca 1860863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 49787068 - 49786862
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    |||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49787068 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaatatgct 49786969  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  49786968 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtga 49786869  T
Q  214 catcaac 220  Q
    |||||||    
T  49786868 catcaac 49786862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 55559278 - 55559131
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  55559278 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 55559179  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55559178 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 55559131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 13337320 - 13337416
Alignment:
Q  120 aatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtgacat 216  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  13337320 aatcaagcgttgatgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtgacat 13337416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 21395349 - 21395555
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21395349 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 21395448  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  21395449 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatatacaaagtctataagcga 21395548  T
Q  214 catcaac 220  Q
    |||||||    
T  21395549 catcaac 21395555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 27192468 - 27192675
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||| || |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  27192468 tggacatcaaaaatttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcatatattcgttaacatgct 27192567  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  27192568 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 27192667  T
Q  214 catcaaca 221  Q
    ||||||||    
T  27192668 catcaaca 27192675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 27842282 - 27842489
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||| || |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  27842282 tggacatcaaaaatttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcatatattcgttaacatgct 27842381  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  27842382 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 27842481  T
Q  214 catcaaca 221  Q
    ||||||||    
T  27842482 catcaaca 27842489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 27509353 - 27509559
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  27509353 tggacattagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 27509452  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  27509453 caactgaatcaagcgttgatgcgagtattcccctttcttggaaaaatagcaggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 27509552  T
Q  214 catcaac 220  Q
     ||||||    
T  27509553 tatcaac 27509559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 28666412 - 28666206
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    |||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28666412 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 28666313  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  28666312 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtga 28666213  T
Q  214 catcaac 220  Q
    |||||||    
T  28666212 catcaac 28666206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 41920413 - 41920207
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  41920413 tggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttatcttcacctggaatcaacgacatcataaattcgttaacatgct 41920314  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
     || |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41920313 taattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 41920214  T
Q  214 catcaac 220  Q
    |||||||    
T  41920213 catcaac 41920207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 24269310 - 24269103
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  24269310 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 24269211  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  24269210 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtga 24269111  T
Q  214 catcaaca 221  Q
    ||||||||    
T  24269110 catcaaca 24269103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 37825246 - 37825040
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    |||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37825246 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 37825147  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| |||||||||||||    
T  37825146 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatttagatcgggatacacagagtctataagtga 37825047  T
Q  214 catcaac 220  Q
    |||||||    
T  37825046 catcaac 37825040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 17684069 - 17683863
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||| ||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  17684069 tggacatcaaaattttcacccgatcgacaaacaaaatcatagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 17683970  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||| ||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  17683969 caattgaatcaagcgttggagcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 17683870  T
Q  214 catcaac 220  Q
    |||||||    
T  17683869 catcaac 17683863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 24245812 - 24246007
Alignment:
Q  22 agaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaactgaa 121  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  24245812 agaattttcacccgatcgacaaacagaatcagatcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaa 24245911  T
Q  122 tcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtgacatc 217  Q
    |||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  24245912 tcaagcgttggtgcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaggtctataagtgacatc 24246007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 35609664 - 35609865
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||    
T  35609664 tggacatcagaattttcactcgatcgacaaacataatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatact 35609763  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||| ||||| ||| |||||||||||||||||    
T  35609764 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaatgttatcattcaaatcggaatacacaaagtctataagtga 35609863  T
Q  214 ca 215  Q
    ||    
T  35609864 ca 35609865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 9001385 - 9001179
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9001385 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 9001286  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  9001285 caactgaatcaagcgttagtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcaatcagatcgggataaacaaagtctataagaga 9001186  T
Q  214 catcaac 220  Q
    |||||||    
T  9001185 catcaac 9001179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 7036699 - 7036905
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7036699 tggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 7036798  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7036799 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaagtagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 7036898  T
Q  214 catcaac 220  Q
    |||||||    
T  7036899 catcaac 7036905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 12781389 - 12781182
Alignment:
Q  14 tggacatcagaattttcacccgatct-acaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgc 112  Q
    |||||||||||||||||||||||||| | ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12781389 tggacatcagaattttcacccgatctcaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgc 12781290  T
Q  113 tcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12781289 tcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtg 12781190  T
Q  213 acatcaac 220  Q
    ||||||||    
T  12781189 acatcaac 12781182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 12786218 - 12786012
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    |||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12786218 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 12786119  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  12786118 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtga 12786019  T
Q  214 catcaac 220  Q
    |||||||    
T  12786018 catcaac 12786012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 21070302 - 21070096
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  21070302 tggacatctaaattttcacccgatcaacaaacagaatcagagcttaaatactctttctcttcaccaggaatcagtgacatcatatattcgttaacatgct 21070203  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  21070202 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcaggttaccaaggttatcattcagatcgggatacacaaagtctataagtga 21070103  T
Q  214 catcaac 220  Q
    |||||||    
T  21070102 catcaac 21070096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 5828795 - 5828590
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  5828795 tggacatcataattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 5828696  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  5828695 caactgagtcaagtgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtga 5828596  T
Q  214 catcaa 219  Q
    ||||||    
T  5828595 catcaa 5828590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 22843792 - 22843990
Alignment:
Q  23 gaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaactgaat 122  Q
    |||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  22843792 gaattttcacccgatcgacaaacagaaacagaacttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 22843891  T
Q  123 caagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtgacatcaaca 221  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| | |||| |||| |||| ||||||||||||||||||||    
T  22843892 caagcgttggtgcgagtattcccctttcttggaaaaatagcaggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaaca 22843990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 42232063 - 42232210
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  42232063 tggacatcagaattttcacccgagcgacaaacaaaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 42232162  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 161  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42232163 caactgaatcaagcgttggtgagagtattcccctttcttggaaaaata 42232210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 184; Significance: 1e-99; HSPs: 2)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 19436 - 19643
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  19436 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaatttgttgacatgct 19535  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  19536 caactgaatcaagcgttgatgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtttataagtga 19635  T
Q  214 catcaaca 221  Q
    ||||||||    
T  19636 catcaaca 19643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 31912 - 32117
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31912 tggacatcagaattttcacccgatctacaaacagaatcagagtttaaatactctttctcttcacctggaatcagcaacatcataaattcgttaacatgct 32011  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32012 caactgaatcaagcgttggtgcaagta-tcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 32110  T
Q  214 catcaac 220  Q
    |||||||    
T  32111 catcaac 32117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 184; Significance: 1e-99; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 17 - 220
Target Start/End: Complemental strand, 37390389 - 37390186
Alignment:
Q  17 acatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaa 116  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37390389 acatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaa 37390290  T
Q  117 ctgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtgacat 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37390289 ctgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgacat 37390190  T
Q  217 caac 220  Q
    ||||    
T  37390189 caac 37390186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 6311235 - 6311028
Alignment:
Q  14 tggacatcagaattttcacccgatct-acaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgc 112  Q
    |||||||||||||||||||||||||| | ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6311235 tggacatcagaattttcacccgatctcaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgc 6311136  T
Q  113 tcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6311135 tcaactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtg 6311036  T
Q  213 acatcaac 220  Q
    ||||||||    
T  6311035 acatcaac 6311028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 16042004 - 16042210
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16042004 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgct 16042103  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||| |||||||||||||| ||    
T  16042104 caactgaatcaagcgttggtgcgagtattcccctttcttggcaaaatagctgggcaccaaggttatcattcagattgggatacacaaagtctataagcga 16042203  T
Q  214 catcaac 220  Q
    |||||||    
T  16042204 catcaac 16042210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 14 - 212
Target Start/End: Complemental strand, 48238717 - 48238519
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  48238717 tggacatcaaagttttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcgcctggaatcagcgacatcatatattcgttaacatgct 48238618  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtg 212  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  48238617 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagagggtcgccaaggttatcattcaaatcgggatacacaaagtctataagtg 48238519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 18148667 - 18148874
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||| |||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  18148667 tggacataagaattttcatccgatcgacaaacagaataagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 18148766  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| || | |||| |||||||| ||||||||    
T  18148767 caaatgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaattgagatacacaaagtcgataagtga 18148866  T
Q  214 catcaaca 221  Q
    ||||||||    
T  18148867 catcaaca 18148874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 2453357 - 2453151
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| || ||||||||| |||||||||||||||    
T  2453357 tggacatcagaattttcacccgatcgacaaatagaatcagagcctaaatactctttctcttcacctggaattagtgacatcatatattcgttaacatgct 2453258  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||| ||  |||||||||||||||||    
T  2453257 caactcaataaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcggaattcacaaagtctataagtga 2453158  T
Q  214 catcaac 220  Q
    |||||||    
T  2453157 catcaac 2453151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 36207194 - 36207400
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||| ||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  36207194 tggacatcataattttcacccgatcgacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 36207293  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||||||  ||||| |||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  36207294 caactgaatcaattgttggggcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 36207393  T
Q  214 catcaac 220  Q
    |||||||    
T  36207394 catcaac 36207400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 2329148 - 2329351
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  2329148 tggacatcagaattttcacccgatcgacaaagagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 2329247  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||||  | ||||||||||||||||||| ||||||||| ||   ||||||||||||    
T  2329248 cgactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagtggatcaccaaggttatcattcaaatcgggatacac---gtctataagtga 2329344  T
Q  214 catcaac 220  Q
    |||||||    
T  2329345 catcaac 2329351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 48775575 - 48775370
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||| ||||  ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||    
T  48775575 tggacatcagactttttgcccgatcgacaaactgaatcagagcttaaatactctttctcttcacctggaatcatttacatcatatattcgttaacatgct 48775476  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||| ||  ||||||||| ||||||||||  ||||||||| ||||||| ||| |||||    
T  48775475 caaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaagagcaggtcaccaatgttatcattctaatcgggatatacaaagtgtattagtga 48775376  T
Q  214 catcaa 219  Q
    ||||||    
T  48775375 catcaa 48775370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 52500648 - 52500795
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  52500648 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 52500747  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  52500748 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 52500795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 48233498 - 48233561
Alignment:
Q  155 aaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtgacatca 218  Q
    ||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  48233498 aaaaatagagggtcgccaaggttatcattcaaatcgggatacacaaagtctataagtgacatca 48233561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 321576 - 321370
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  321576 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctgaaatcagcgatatcataaattcgttaacatgct 321477  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||    
T  321476 caactgaatcaagcattggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacaaaaagtctataagtga 321377  T
Q  214 catcaac 220  Q
    |||||||    
T  321376 catcaac 321370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 183; Significance: 4e-99; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 27881063 - 27881269
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27881063 tggacatcataattttcacccgatctacaaatagaatcagagcttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgct 27881162  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27881163 cagctgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 27881262  T
Q  214 catcaac 220  Q
    |||||||    
T  27881263 catcaac 27881269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 14 - 225
Target Start/End: Complemental strand, 25543033 - 25542822
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  25543033 tggacatcataattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 25542934  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  25542933 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 25542834  T
Q  214 catcaacatatt 225  Q
    ||||||||||||    
T  25542833 catcaacatatt 25542822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 8428814 - 8428608
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||| ||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8428814 tggacatcagaatattcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 8428715  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8428714 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 8428615  T
Q  214 catcaac 220  Q
    |||||||    
T  8428614 catcaac 8428608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 37372915 - 37373121
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  37372915 tggacatcagaattatcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcataaattggttaacatgct 37373014  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37373015 caactgaatcaagcgttggtgcgagtattcccctttcttcgaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 37373114  T
Q  214 catcaac 220  Q
    |||||||    
T  37373115 catcaac 37373121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 39883162 - 39883368
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  39883162 tggacatcataattgtcacccgatctacaaacagaatcagagcttaaatactctttctcttcacttggaatcaacgacatcataaattcgttaacatgct 39883261  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  39883262 caactgaatcaagcgttggtgcgagtattcccctttcttggcaaaatagctgggcaccaaggttatcattcagatcgggatacacaaagtctataagtga 39883361  T
Q  214 catcaac 220  Q
    |||||||    
T  39883362 catcaac 39883368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 14193052 - 14192845
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  14193052 tggacatcagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 14192953  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  14192952 caactgaattaagcgttggtgcgagtattcccctttcttggaaaaatagcggatcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 14192853  T
Q  214 catcaaca 221  Q
    ||||||||    
T  14192852 catcaaca 14192845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 23 - 220
Target Start/End: Complemental strand, 17871868 - 17871671
Alignment:
Q  23 gaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaactgaat 122  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  17871868 gaattttcacccgatcgacaaacagaaccagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 17871769  T
Q  123 caagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtgacatcaac 220  Q
    |||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| | |||| |||| |||| |||||||||||||||||||    
T  17871768 caagcgttggtgcgagtatttccctttcttggaaaaatagcgggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaac 17871671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 24630101 - 24629954
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  24630101 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 24630002  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24630001 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 24629954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 3689961 - 3690162
Alignment:
Q  19 atcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaact 118  Q
    |||||||||||| ||||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||  ||||||||| |||||||||||||||||||     
T  3689961 atcagaattttcgcccgatcgacaaactgaatcagagcttaaatactctttctctccacttggaatcactgacatcatatattcgttaacatgctcaacc 3690060  T
Q  119 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtgacatca 218  Q
    ||||||||||||||||||||||||| | ||||||| ||||| ||  ||||||||| ||||||||||| ||||||||| |||||||| || ||||||||||    
T  3690061 gaatcaagcgttggtgcgagtattcacttttcttgaaaaaagagtgggtcaccaatgttatcattcaaatcgggatatacaaagtccattagtgacatca 3690160  T
Q  219 ac 220  Q
    ||    
T  3690161 ac 3690162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 220
Target Start/End: Complemental strand, 3876826 - 3876625
Alignment:
Q  19 atcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaact 118  Q
    |||||||||||| ||||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||  ||||||||| |||||||||||||||||||     
T  3876826 atcagaattttcgcccgatcgacaaactgaatcagagcttaaatactctttctctccacttggaatcactgacatcatatattcgttaacatgctcaacc 3876727  T
Q  119 gaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtgacatca 218  Q
    ||||||||||||||||||||||||| | ||||||| ||||| ||  |||| |||| ||||||||||| ||||||||| |||||||| || ||||||||||    
T  3876726 gaatcaagcgttggtgcgagtattcacttttcttgaaaaaagagtgggtccccaatgttatcattcaaatcgggatatacaaagtccattagtgacatca 3876627  T
Q  219 ac 220  Q
    ||    
T  3876626 ac 3876625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 10025042 - 10025189
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||| ||||||||  ||||||||| ||||||||||||| |    
T  10025042 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacttggaatcaatgacatcatatattcgttaacatgtt 10025141  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10025142 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 10025189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 30346784 - 30346637
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  30346784 tggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 30346685  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 161  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  30346684 caacttaatcaagtgttggtgcgagtattcccctttcttggaaaaata 30346637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 37261294 - 37261482
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||| |||| |||||    
T  37261294 tggacatcaaaattttcacccgatcgacaaacagaatcagagcttaaatactatttctcttcacctggaatcagtgacatcatatattcattaatatgct 37261393  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaag 202  Q
    ||||||||||||| ||||| || ||||||||||||||||| |||||||   |||||  |||||||||||||| || |||||| ||||||    
T  37261394 caactgaatcaagtgttggcgcaagtattcccctttcttgaaaaaataacgggtcattaaggttatcattcaaattgggatacacaaag 37261482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 6089199 - 6089232
Alignment:
Q  24 aattttcacccgatctacaaacagaatcagagct 57  Q
    ||||||||||||||| ||||||||||||||||||    
T  6089199 aattttcacccgatcgacaaacagaatcagagct 6089232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 179; Significance: 1e-96; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 32750 - 32956
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32750 tggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgct 32849  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  32850 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtccataagtga 32949  T
Q  214 catcaac 220  Q
    |||||||    
T  32950 catcaac 32956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 10110579 - 10110786
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  10110579 tggacatcagaattttcacccgatcaacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 10110678  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||| |||| ||||||||| |||||||    
T  10110679 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtga 10110778  T
Q  214 catcaaca 221  Q
    ||||||||    
T  10110779 catcaaca 10110786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 52918045 - 52918252
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  52918045 tggacatcagaattttcacccgatcgacaaacaaaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 52918144  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||||| ||||||||| || |||||||||||||     
T  52918145 caactgaatcaagcgttggtgcgggtattcccctttcttggaaaaatagcgagtcaccaaggttatcattcaaatcgggatacacgaagtctataagtgg 52918244  T
Q  214 catcaaca 221  Q
    ||||||||    
T  52918245 catcaaca 52918252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 218
Target Start/End: Original strand, 50410151 - 50410355
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  50410151 tggacatcagaattttcacccgatcgacaaagagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatatttgttaacatgct 50410250  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||||  |||| |||||||||||||||| ||||||||| |||||||||||||||||    
T  50410251 cgactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagtgggtcgccaaggttatcattcaaatcgggatacacaaagtctataagtga 50410350  T
Q  214 catca 218  Q
    |||||    
T  50410351 catca 50410355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 10000386 - 10000593
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  10000386 tggacatcagaattttcacccgatcaacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 10000485  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||| |||| |||| ||||||||| |||||||    
T  10000486 caactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtga 10000585  T
Q  214 catcaaca 221  Q
     |||||||    
T  10000586 tatcaaca 10000593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 10237535 - 10237741
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  10237535 tggacatcagaattttcacccgatcaacaaacataatcaaagcttaa-tactctttctcttcacctggaatcagtaacatcatatattcgttaacatgct 10237633  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| |||| |||| ||||||||| |||||||    
T  10237634 caactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtga 10237733  T
Q  214 catcaaca 221  Q
    ||||||||    
T  10237734 catcaaca 10237741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 10969021 - 10968815
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  10969021 tggacatcagaattttcacccgatcgacaaacaaaataagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 10968922  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
     |||||||||||||||||||||||||||||||||| ||| |||||||||  |||||| ||| |||||||||| ||||||||| ||||||||||||||||     
T  10968921 aaactgaatcaagcgttggtgcgagtattccccttgcttagaaaaatagcaggtcacgaagtttatcattcaaatcgggatacacaaagtctataagtgg 10968822  T
Q  214 catcaac 220  Q
    |||||||    
T  10968821 catcaac 10968815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 13530018 - 13530224
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    |||||| || |||||||||| |||| |||| ||||| |||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| |||||    
T  13530018 tggacaccaaaattttcacctgatcgacaagcagaaccagagcttaaatactctttctcttcacctggactcagtgacatcatatattcgttaaaatgct 13530117  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  13530118 caactgaatgaagtgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 13530217  T
Q  214 catcaac 220  Q
    |||||||    
T  13530218 catcaac 13530224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 16 - 220
Target Start/End: Original strand, 11362239 - 11362444
Alignment:
Q  16 gacatcagaattttcacccgatctacaaacagaatcagagcttaaatac-tctttctcttcacctggaatcagcgacatcataaattcgttaacatgctc 114  Q
    ||||||||| ||||| ||||||| |||||| ||||||||||||||| |  ||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  11362239 gacatcagacttttcgcccgatcgacaaactgaatcagagcttaaaaaaatctttctcttcacctggaatcactgacatcatatattcgttaacatgctc 11362338  T
Q  115 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtgac 214  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||||||  ||||||||| ||||||||| | ||||||||| ||||||||||| ||||||    
T  11362339 aaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaatagtgggtcaccaatgttatcatttaaatcgggatatacaaagtctattagtgac 11362438  T
Q  215 atcaac 220  Q
    ||||||    
T  11362439 atcaac 11362444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 11368625 - 11368833
Alignment:
Q  14 tggacatcagaatttt-cacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgc 112  Q
    ||||||||||| |||| ||||| ||| |||||  ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  11368625 tggacatcagactttttcacccaatcgacaaattgaatcagagcttaaatactctttctcttcacctggaatcactgacatcatatattcgttaacatgc 11368724  T
Q  113 tcaactgaatcaagcgttggtgcgagtattcccctttcttgg-aaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagt 211  Q
    ||||| ||||||||||||||||||||||||||| |||||||| ||||| ||  ||||||||| ||||||||||| ||||||||| ||||||||||| |||    
T  11368725 tcaaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaaagagcgggtcaccaatgttatcattcaaatcgggatatacaaagtctatgagt 11368824  T
Q  212 gacatcaac 220  Q
    |||||||||    
T  11368825 gacatcaac 11368833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 14 - 209
Target Start/End: Original strand, 46913050 - 46913245
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||| | ||||||| ||||||| ||||| |||||||||||| ||| ||||||||||||||  | ||||||||| |||||||||||||||    
T  46913050 tggacatcagaatttccccccgatcgacaaacataatcaaagcttaaatactatttttcttcacctggaattggtgacatcatatattcgttaacatgct 46913149  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataa 209  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||  |||| |||| ||||||||||| ||||||||| |||||||||||||    
T  46913150 caactgaatcaagcgttggtgcgagtattctcctttcttggaaaaatagcgggtcgccaaagttatcattcaaatcgggatacacaaagtctataa 46913245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 10038623 - 10038807
Alignment:
Q  18 catcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaac 117  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||||||||||||||||| ||||||||| |||| |||| ||||||||     
T  10038623 catcagaattttcacccgatcgacaaacagaatgagagcttaaataatatttctcttcacctggaatcagtgacatcatatattcattaatatgctcaat 10038722  T
Q  118 tgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaag 202  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||  |||||| |||||||||||||| || |||||| ||||||    
T  10038723 tgaatcaagtgttggcgcgagtattcccctttcttggaaaaatagcgggtcactaaggttatcattcaaattgggatacacaaag 10038807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 47692948 - 47693115
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    |||||||||||||||||  |||||| |||||||||||||||| |||||||||||||||||||||||||||| || ||||||||  |||||||||||||||    
T  47692948 tggacatcagaattttcgtccgatcgacaaacagaatcagaggttaaatactctttctcttcacctggaattagtgacatcatgtattcgttaacatgct 47693047  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatca 181  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||| |  |||||||||||||||||    
T  47693048 caactgaatcaagcgttggtgcgaggattcccctttcttgggaaaattgtgggtcaccaaggttatca 47693115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 178; Significance: 4e-96; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 29640266 - 29640061
Alignment:
Q  16 gacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctca 115  Q
    ||||||||||||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29640266 gacatcagaattttcacccgatctaaaaatagaattagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctca 29640167  T
Q  116 actgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtgaca 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  29640166 actgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcaggatacacaaagtctataagtgaca 29640067  T
Q  216 tcaaca 221  Q
    ||||||    
T  29640066 tcaaca 29640061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 15333622 - 15333828
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15333622 tggacatcagaattttcacctgatctacaaacagaatcagagcctaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 15333721  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||||||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  15333722 caactgaatcaagtgttggtgcgagtattcccatttgttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctattagtga 15333821  T
Q  214 catcaac 220  Q
    |||||||    
T  15333822 catcaac 15333828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 31510437 - 31510232
Alignment:
Q  16 gacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctca 115  Q
    ||||||||||||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31510437 gacatcagaattttcacccgatctaaaaatagaattagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctca 31510338  T
Q  116 actgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtgaca 215  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  31510337 actgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagttggtcaccaaggttatcattcagattaggatacacaaagtctataagtgaca 31510238  T
Q  216 tcaaca 221  Q
    ||||||    
T  31510237 tcaaca 31510232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 2202419 - 2202213
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  2202419 tggacatcagaattttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 2202320  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  2202319 ctactgaattaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 2202220  T
Q  214 catcaac 220  Q
    |||||||    
T  2202219 catcaac 2202213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 14 - 216
Target Start/End: Original strand, 18344104 - 18344306
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||| ||||||||||||||| ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||    
T  18344104 tggacatcaaaattttcacccgatcgacaaatagaatcaaagcttaaatactctttctcttcgcctggaatcagcgacatcatatattcgtcaacatgct 18344203  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  18344204 caactgaatcaagcgttggtgcaagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 18344303  T
Q  214 cat 216  Q
    |||    
T  18344304 cat 18344306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 10187523 - 10187729
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  10187523 tggacatcaaaattttcacccgatcgacaaacagaatcatagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 10187622  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||| ||||||||| ||||| |||||||||||| ||||||||||||||||  ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  10187623 caattgaatcaagtgttggagcgagtattcccttttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 10187722  T
Q  214 catcaac 220  Q
    |||||||    
T  10187723 catcaac 10187729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 23 - 220
Target Start/End: Original strand, 30881315 - 30881512
Alignment:
Q  23 gaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaactgaat 122  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  30881315 gaattttcacccgatcgacaaacagaaccagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 30881414  T
Q  123 caagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtgacatcaac 220  Q
    |||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| | |||| |||| |||| |||||||||||||||||||    
T  30881415 caagcgttggtgcgagtatttccctttcttggaaaaatagcgggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaac 30881512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 14 - 169
Target Start/End: Original strand, 12517367 - 12517522
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12517367 tggacatcagaattttcaccccatcatcaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 12517466  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtca 169  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| ||||||    
T  12517467 caactgaatcaagcgttggtgcaaatattcccctttcttggaaaaatagctggtca 12517522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 812 - 606
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  812 tggacatcagaattttcacccaatctacaaacagaatcagaggttaaatactctttcttttcacctggaatcagcgacatcataaattcattaacatgct 713  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  712 caactgaatcaagcgttggtgcgagtattcccctttattggaaaaatagctggtcaccaaggttatcatttagatcgggatacacaaagtttataagtga 613  T
Q  214 catcaac 220  Q
    |||||||    
T  612 catcaac 606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 49176 - 48970
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    |||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  49176 tggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgct 49077  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  49076 caattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtga 48977  T
Q  214 catcaac 220  Q
    |||||||    
T  48976 catcaac 48970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 17 - 225
Target Start/End: Original strand, 18988 - 19196
Alignment:
Q  17 acatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaa 116  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  18988 acatcagaattttcactcgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaa 19087  T
Q  117 ctgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtgacat 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| |||  |||| ||||||||||||||||||||    
T  19088 ctgaatcaagcgttggtgcgagtattccccttttttggaaaaatagcgggtcaccaaggttatcattcaaatcaagatacacaaagtctataagtgacat 19187  T
Q  217 caacatatt 225  Q
    |||||||||    
T  19188 caacatatt 19196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 186534 - 186740
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  186534 tggacatcagaattt-cacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 186632  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  186633 cagctgaatcaagcgttggtgcgagtattcccctttattggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 186732  T
Q  214 catcaaca 221  Q
    ||||||||    
T  186733 catcaaca 186740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 5499 - 5295
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||    
T  5499 tggacatcagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctgaaatcagtgacatcatatattcgttaacatgct 5400  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  5399 caactgaatcaagcgttggtgcgagtattcccctttcttgg-aaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtga 5301  T
Q  214 catcaa 219  Q
    ||||||    
T  5300 catcaa 5295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1139 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold1139
Description:

Target: scaffold1139; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 18 - 220
Target Start/End: Original strand, 983 - 1185
Alignment:
Q  18 catcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaac 117  Q
    ||||||||||||| ||||||  ||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||| ||    
T  983 catcagaattttcgcccgattgacaaacaaaatcagagcttaaatactctttctcttcacttggaatcagtgacatcatatattcgttaacatgctcgac 1082  T
Q  118 tgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtgacatc 217  Q
    ||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  1083 tgaattaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatc 1182  T
Q  218 aac 220  Q
    |||    
T  1183 aac 1185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0356 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 18109 - 17910
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||| |||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  18109 tggacatcataattttcacccgatcggcaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 18010  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    ||||| ||||||||||||||||||||||||||||||||||       ||  | ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  18009 caactaaatcaagcgttggtgcgagtattcccctttcttg-------agcggatcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 17917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 131; Significance: 4e-68; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 18 - 220
Target Start/End: Original strand, 182794 - 182996
Alignment:
Q  18 catcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaac 117  Q
    ||||||| ||||| ||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||  ||||||||| |||||||||||||||||||    
T  182794 catcagatttttcgcccgatcgacaaactgaatcagagcttaaatactctttctcttcacttggaatcactgacatcatatattcgttaacatgctcaac 182893  T
Q  118 tgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtgacatc 217  Q
     ||||||||||||||||||||||||||| ||||||||||||| ||  ||||||||| | ||||||||| ||||||||| ||||||||||| |||||||||    
T  182894 cgaatcaagcgttggtgcgagtattcccttttcttggaaaaagagtgggtcaccaatgatatcattcaaatcgggatatacaaagtctattagtgacatc 182993  T
Q  218 aac 220  Q
    |||    
T  182994 aac 182996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 16 - 220
Target Start/End: Original strand, 165511 - 165716
Alignment:
Q  16 gacatcagaattttcacccgatctacaaacagaatcagagcttaaatac-tctttctcttcacctggaatcagcgacatcataaattcgttaacatgctc 114  Q
    ||||||||| ||||| ||||||| |||||| ||||||||||||||| |  ||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  165511 gacatcagacttttcgcccgatcgacaaactgaatcagagcttaaaaaaatctttctcttcacctggaatcactgacatcatatattcgttaacatgctc 165610  T
Q  115 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtgac 214  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||||||  ||||||||| ||||||||| | ||||||||| ||||||||||| ||||||    
T  165611 aaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaatagtgggtcaccaatgttatcatttaaatcgggatatacaaagtctattagtgac 165710  T
Q  215 atcaac 220  Q
    ||||||    
T  165711 atcaac 165716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 16663 - 16869
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||||||||||| | ||||  | ||||||||||| |||||||| ||||||||||||||||| ||||||| || |||||| || ||||||||| ||    
T  16663 tggacatcagaattttcgctcgattgaaaaacagaatcatagcttaaaaactctttctcttcacctagaatcagtgaaatcatatatgcgttaacatact 16762  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcagatcgggataaacaaagtctataagtga 213  Q
    | ||| ||| |||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||| |||||||||||||||||    
T  16763 ccactaaattaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaagttatcattcaaatcgggatacacaaagtctataagtga 16862  T
Q  214 catcaac 220  Q
    |||||||    
T  16863 catcaac 16869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 28874 - 28727
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    ||||||||| ||||||||||| | | |||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  28874 tggacatcaaaattttcacccaagcgacaaacagaatcagagtttaaatactttttctcttcacctggaatcagtgacatcatatattcgttaacatgtt 28775  T
Q  114 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28774 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaata 28727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 142 - 24
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 113  Q
    |||| |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||  |||||| |||||| |||||| || |||||||||||||||    
T  142 tggaaatcagaattttcacccgatcgacatacaaaatcagagcttaaatactctttctcgccacctgaaatcagtgacatcgtatattcgttaacatgct 43  T
Q  114 caactgaatcaagcgttgg 132  Q
    |||||||||||||| ||||    
T  42 caactgaatcaagccttgg 24  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1424 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1424
Description:

Target: scaffold1424; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 1627 - 1700
Alignment:
Q  14 tggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcag 87  Q
    ||||||||| ||||||||||||||| | ||||| |||||||| |||||||| ||||||||||||||||||||||    
T  1627 tggacatcaaaattttcacccgatcgataaacataatcagagtttaaatacgctttctcttcacctggaatcag 1700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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