View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7708A_low_244 (Length: 230)
Name: NF7708A_low_244
Description: NF7708A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7708A_low_244 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 32 - 230
Target Start/End: Original strand, 51376501 - 51376699
Alignment:
| Q |
32 |
attccagagatgatatagggcatattgcattaggcttaaacgccttacaaagttacccatcatcacaagtaaatgagacaaactgataaaatacgcaagg |
131 |
Q |
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| T |
51376501 |
attccagagatgatatagggcatattgcattaggcttaaacgccttacaaagttacccatcatcacaagtaaatgagacaaactcataaaatacgcaagg |
51376600 |
T |
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| Q |
132 |
tacatatttttaactttcaagcatttgacattaatctttaagttttgagcatcaaacattaaatttgtaattatcaaatacgcattgtgaccacattga |
230 |
Q |
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| T |
51376601 |
tacatatttttaactttcaagcatttgacattaatctttaagtttcgagcatcaaacattaaatttgtaattatcaaatacgcattgtgaccgcattga |
51376699 |
T |
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